HEADER HYDROLASE 08-AUG-16 5SWL TITLE CRYSTAL STRUCTURE OF ATPASE DELTA1-79 SPA47 E188A COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE ATP SYNTHASE SPAL/MXIB; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 80-430; COMPND 5 SYNONYM: SPA47; COMPND 6 EC: 3.6.3.14; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHIGELLA FLEXNERI; SOURCE 3 ORGANISM_TAXID: 623; SOURCE 4 STRAIN: 2457T; SOURCE 5 GENE: SPAL, MXIB, SPA47, CP0149; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: TUNER(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PTYB21 KEYWDS ATPASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.MORALES,S.J.JOHNSON,J.L.BURGESS,R.A.BURGESS,N.E.DICKENSON REVDAT 5 04-OCT-23 5SWL 1 REMARK REVDAT 4 11-DEC-19 5SWL 1 REMARK REVDAT 3 27-SEP-17 5SWL 1 REMARK REVDAT 2 28-DEC-16 5SWL 1 JRNL REVDAT 1 02-NOV-16 5SWL 0 JRNL AUTH J.L.BURGESS,R.A.BURGESS,Y.MORALES,J.M.BOUVANG,S.J.JOHNSON, JRNL AUTH 2 N.E.DICKENSON JRNL TITL STRUCTURAL AND BIOCHEMICAL CHARACTERIZATION OF SPA47 JRNL TITL 2 PROVIDES MECHANISTIC INSIGHT INTO TYPE III SECRETION SYSTEM JRNL TITL 3 ATPASE ACTIVATION AND SHIGELLA VIRULENCE REGULATION. JRNL REF J. BIOL. CHEM. V. 291 25837 2016 JRNL REFN ESSN 1083-351X JRNL PMID 27770024 JRNL DOI 10.1074/JBC.M116.755256 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 18848 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 951 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.5638 - 5.1583 1.00 2590 140 0.1617 0.2229 REMARK 3 2 5.1583 - 4.0963 1.00 2556 134 0.1591 0.2173 REMARK 3 3 4.0963 - 3.5790 1.00 2591 137 0.1871 0.2699 REMARK 3 4 3.5790 - 3.2520 1.00 2553 138 0.2221 0.2848 REMARK 3 5 3.2520 - 3.0191 1.00 2540 131 0.2471 0.2668 REMARK 3 6 3.0191 - 2.8412 1.00 2561 136 0.2807 0.3109 REMARK 3 7 2.8412 - 2.6989 0.97 2506 135 0.2881 0.3264 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.120 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.97 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5370 REMARK 3 ANGLE : 0.423 7253 REMARK 3 CHIRALITY : 0.039 833 REMARK 3 PLANARITY : 0.003 931 REMARK 3 DIHEDRAL : 15.646 3248 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 83 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.2133 8.2439 -6.1764 REMARK 3 T TENSOR REMARK 3 T11: 0.3945 T22: 0.3835 REMARK 3 T33: 0.3588 T12: -0.0198 REMARK 3 T13: -0.1061 T23: 0.1499 REMARK 3 L TENSOR REMARK 3 L11: 4.0133 L22: 3.5032 REMARK 3 L33: 4.4636 L12: -2.1381 REMARK 3 L13: 0.1757 L23: 0.7020 REMARK 3 S TENSOR REMARK 3 S11: 0.1160 S12: -0.4465 S13: -0.1647 REMARK 3 S21: 0.5744 S22: -0.0212 S23: -0.4142 REMARK 3 S31: 0.1843 S32: 0.2948 S33: -0.0638 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 119 THROUGH 140 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.0076 18.5302 -26.1187 REMARK 3 T TENSOR REMARK 3 T11: 0.3354 T22: 0.3133 REMARK 3 T33: 0.4464 T12: -0.0659 REMARK 3 T13: -0.0632 T23: 0.1492 REMARK 3 L TENSOR REMARK 3 L11: 1.4406 L22: 2.3229 REMARK 3 L33: 1.5010 L12: -1.4220 REMARK 3 L13: -1.3619 L23: 1.4451 REMARK 3 S TENSOR REMARK 3 S11: 0.4117 S12: 0.1380 S13: 0.0231 REMARK 3 S21: -0.0398 S22: -0.2071 S23: -0.4949 REMARK 3 S31: -0.0350 S32: 0.3316 S33: -0.1730 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 141 THROUGH 202 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.1917 23.0069 -15.3547 REMARK 3 T TENSOR REMARK 3 T11: 0.2455 T22: 0.3199 REMARK 3 T33: 0.2558 T12: -0.0134 REMARK 3 T13: -0.0343 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 2.8036 L22: 2.6428 REMARK 3 L33: 2.6018 L12: -0.9343 REMARK 3 L13: 2.2097 L23: -1.4214 REMARK 3 S TENSOR REMARK 3 S11: -0.1387 S12: -0.4266 S13: 0.1573 REMARK 3 S21: 0.1837 S22: -0.0768 S23: 0.2204 REMARK 3 S31: -0.2251 S32: -0.0902 S33: 0.1962 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 203 THROUGH 265 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7718 20.7763 -9.2675 REMARK 3 T TENSOR REMARK 3 T11: 0.2829 T22: 0.3267 REMARK 3 T33: 0.2739 T12: 0.0010 REMARK 3 T13: -0.0872 T23: 0.0440 REMARK 3 L TENSOR REMARK 3 L11: 2.4293 L22: 3.2113 REMARK 3 L33: 2.7527 L12: -0.7073 REMARK 3 L13: -1.1070 L23: 0.4449 REMARK 3 S TENSOR REMARK 3 S11: -0.0925 S12: -0.2571 S13: 0.2002 REMARK 3 S21: 0.5800 S22: 0.0658 S23: -0.0131 REMARK 3 S31: -0.2559 S32: 0.1521 S33: -0.0229 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 266 THROUGH 305 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.6359 24.3571 -17.7736 REMARK 3 T TENSOR REMARK 3 T11: 0.3901 T22: 0.4159 REMARK 3 T33: 0.4986 T12: -0.1510 REMARK 3 T13: -0.0596 T23: 0.0637 REMARK 3 L TENSOR REMARK 3 L11: 3.2320 L22: 1.7253 REMARK 3 L33: 2.0924 L12: -0.6129 REMARK 3 L13: 0.6933 L23: 1.2364 REMARK 3 S TENSOR REMARK 3 S11: -0.0437 S12: -0.3085 S13: 0.4719 REMARK 3 S21: -0.0177 S22: 0.1312 S23: -0.6870 REMARK 3 S31: -0.5144 S32: 0.4605 S33: -0.0169 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 306 THROUGH 408 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.7447 37.9813 -29.4168 REMARK 3 T TENSOR REMARK 3 T11: 0.3397 T22: 0.2605 REMARK 3 T33: 0.3284 T12: 0.0037 REMARK 3 T13: -0.0164 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 5.4043 L22: 3.1726 REMARK 3 L33: 1.2658 L12: -2.8006 REMARK 3 L13: 0.6157 L23: -0.6878 REMARK 3 S TENSOR REMARK 3 S11: -0.2229 S12: -0.1377 S13: 0.6143 REMARK 3 S21: 0.4438 S22: 0.0139 S23: -0.2121 REMARK 3 S31: -0.2480 S32: -0.1626 S33: 0.2278 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 409 THROUGH 430 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0925 23.6889 -30.4235 REMARK 3 T TENSOR REMARK 3 T11: 0.1447 T22: 0.2551 REMARK 3 T33: 0.4033 T12: 0.0132 REMARK 3 T13: -0.0255 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 5.8428 L22: 7.0036 REMARK 3 L33: 8.0894 L12: -1.4290 REMARK 3 L13: -1.2611 L23: 0.9109 REMARK 3 S TENSOR REMARK 3 S11: -0.3200 S12: -0.1370 S13: -0.0520 REMARK 3 S21: 0.1848 S22: 0.2552 S23: 0.6455 REMARK 3 S31: 0.5510 S32: -0.5826 S33: 0.0552 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 83 THROUGH 140 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.9659 1.4859 -43.3245 REMARK 3 T TENSOR REMARK 3 T11: 0.3968 T22: 0.2636 REMARK 3 T33: 0.3282 T12: 0.0243 REMARK 3 T13: 0.0883 T23: 0.0452 REMARK 3 L TENSOR REMARK 3 L11: 1.1729 L22: 1.0517 REMARK 3 L33: 3.3063 L12: 0.7756 REMARK 3 L13: -0.6376 L23: -0.0116 REMARK 3 S TENSOR REMARK 3 S11: 0.0804 S12: 0.2169 S13: 0.1748 REMARK 3 S21: -0.2374 S22: 0.0752 S23: -0.0939 REMARK 3 S31: -0.5521 S32: 0.1782 S33: -0.1638 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 141 THROUGH 219 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.3849 -8.0536 -42.2171 REMARK 3 T TENSOR REMARK 3 T11: 0.3187 T22: 0.3744 REMARK 3 T33: 0.3237 T12: -0.0507 REMARK 3 T13: -0.0448 T23: -0.0395 REMARK 3 L TENSOR REMARK 3 L11: 2.5337 L22: 2.3530 REMARK 3 L33: 2.8089 L12: -0.4198 REMARK 3 L13: -1.9059 L23: -0.8209 REMARK 3 S TENSOR REMARK 3 S11: -0.0900 S12: 0.6298 S13: -0.2350 REMARK 3 S21: -0.4480 S22: -0.0903 S23: 0.3061 REMARK 3 S31: 0.3944 S32: -0.5628 S33: 0.1812 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 220 THROUGH 340 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.1278 -13.6133 -39.3311 REMARK 3 T TENSOR REMARK 3 T11: 0.3964 T22: 0.3028 REMARK 3 T33: 0.3754 T12: 0.0480 REMARK 3 T13: 0.0595 T23: 0.0367 REMARK 3 L TENSOR REMARK 3 L11: 2.7803 L22: 2.0595 REMARK 3 L33: 3.4133 L12: -0.0402 REMARK 3 L13: -0.2549 L23: 0.1233 REMARK 3 S TENSOR REMARK 3 S11: -0.0316 S12: 0.0140 S13: -0.7376 REMARK 3 S21: -0.3490 S22: -0.1414 S23: -0.2303 REMARK 3 S31: 0.6685 S32: 0.2092 S33: 0.1353 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 341 THROUGH 430 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6387 -17.1275 -20.2941 REMARK 3 T TENSOR REMARK 3 T11: 0.2126 T22: 0.2964 REMARK 3 T33: 0.2841 T12: 0.0014 REMARK 3 T13: 0.0319 T23: -0.0260 REMARK 3 L TENSOR REMARK 3 L11: 2.8345 L22: 4.6554 REMARK 3 L33: 2.2880 L12: 2.1925 REMARK 3 L13: -0.5396 L23: -1.5073 REMARK 3 S TENSOR REMARK 3 S11: -0.0630 S12: -0.0568 S13: -0.0608 REMARK 3 S21: -0.0691 S22: 0.0427 S23: 0.2132 REMARK 3 S31: 0.1453 S32: -0.0740 S33: 0.0142 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5SWL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1000223266. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18877 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.14900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.86800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5SWJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS, AMMONIUM ACETATE, LITHIUM REMARK 280 SULFATE, PEG 4000, MPD, PH 8.5, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 76.29850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 79 REMARK 465 ALA A 80 REMARK 465 GLN A 81 REMARK 465 PHE A 82 REMARK 465 GLU A 267 REMARK 465 SER A 268 REMARK 465 PRO A 269 REMARK 465 ALA A 270 REMARK 465 ARG A 271 REMARK 465 ARG A 272 REMARK 465 GLY A 273 REMARK 465 TYR A 274 REMARK 465 ASP A 309 REMARK 465 ASP A 310 REMARK 465 PHE A 311 REMARK 465 ALA A 312 REMARK 465 ASN B 79 REMARK 465 ALA B 80 REMARK 465 GLN B 81 REMARK 465 PHE B 82 REMARK 465 SER B 268 REMARK 465 PRO B 269 REMARK 465 ALA B 270 REMARK 465 ARG B 271 REMARK 465 ARG B 272 REMARK 465 GLY B 273 REMARK 465 TYR B 274 REMARK 465 GLU B 307 REMARK 465 ASP B 308 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 308 CG OD1 OD2 REMARK 470 GLU B 267 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 160 -152.67 -108.75 REMARK 500 ALA A 341 41.50 -81.20 REMARK 500 GLU A 390 -72.76 -68.15 REMARK 500 PRO B 98 16.34 -68.50 REMARK 500 LYS B 205 20.08 -77.83 REMARK 500 ASP B 324 37.82 -94.50 REMARK 500 ALA B 341 48.87 -81.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 659 DISTANCE = 6.86 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5SWJ RELATED DB: PDB DBREF 5SWL A 80 430 UNP P0A1C1 SPAL_SHIFL 80 430 DBREF 5SWL B 80 430 UNP P0A1C1 SPAL_SHIFL 80 430 SEQADV 5SWL ASN A 79 UNP P0A1C1 EXPRESSION TAG SEQADV 5SWL ALA A 188 UNP P0A1C1 GLU 188 ENGINEERED MUTATION SEQADV 5SWL ASN B 79 UNP P0A1C1 EXPRESSION TAG SEQADV 5SWL ALA B 188 UNP P0A1C1 GLU 188 ENGINEERED MUTATION SEQRES 1 A 352 ASN ALA GLN PHE LEU HIS THR GLN VAL GLY ARG GLY LEU SEQRES 2 A 352 LEU GLY ALA VAL VAL ASN PRO LEU GLY GLU VAL THR ASP SEQRES 3 A 352 LYS PHE ALA VAL THR ASP ASN SER GLU ILE LEU TYR ARG SEQRES 4 A 352 PRO VAL ASP ASN ALA PRO PRO LEU TYR SER GLU ARG ALA SEQRES 5 A 352 ALA ILE GLU LYS PRO PHE LEU THR GLY ILE LYS VAL ILE SEQRES 6 A 352 ASP SER LEU LEU THR CYS GLY GLU GLY GLN ARG MET GLY SEQRES 7 A 352 ILE PHE ALA SER ALA GLY CYS GLY LYS THR PHE LEU MET SEQRES 8 A 352 ASN MET LEU ILE GLU HIS SER GLY ALA ASP ILE TYR VAL SEQRES 9 A 352 ILE GLY LEU ILE GLY ALA ARG GLY ARG GLU VAL THR GLU SEQRES 10 A 352 THR VAL ASP TYR LEU LYS ASN SER GLU LYS LYS SER ARG SEQRES 11 A 352 CYS VAL LEU VAL TYR ALA THR SER ASP TYR SER SER VAL SEQRES 12 A 352 ASP ARG CYS ASN ALA ALA TYR ILE ALA THR ALA ILE ALA SEQRES 13 A 352 GLU PHE PHE ARG THR GLU GLY HIS LYS VAL ALA LEU PHE SEQRES 14 A 352 ILE ASP SER LEU THR ARG TYR ALA ARG ALA LEU ARG ASP SEQRES 15 A 352 VAL ALA LEU ALA ALA GLY GLU SER PRO ALA ARG ARG GLY SEQRES 16 A 352 TYR PRO VAL SER VAL PHE ASP SER LEU PRO ARG LEU LEU SEQRES 17 A 352 GLU ARG PRO GLY LYS LEU LYS ALA GLY GLY SER ILE THR SEQRES 18 A 352 ALA PHE TYR THR VAL LEU LEU GLU ASP ASP ASP PHE ALA SEQRES 19 A 352 ASP PRO LEU ALA GLU GLU VAL ARG SER ILE LEU ASP GLY SEQRES 20 A 352 HIS ILE TYR LEU SER ARG ASN LEU ALA GLN LYS GLY GLN SEQRES 21 A 352 PHE PRO ALA ILE ASP SER LEU LYS SER ILE SER ARG VAL SEQRES 22 A 352 PHE THR GLN VAL VAL ASP GLU LYS HIS ARG ILE MET ALA SEQRES 23 A 352 ALA ALA PHE ARG GLU LEU LEU SER GLU ILE GLU GLU LEU SEQRES 24 A 352 ARG THR ILE ILE ASP PHE GLY GLU TYR LYS PRO GLY GLU SEQRES 25 A 352 ASN ALA SER GLN ASP LYS ILE TYR ASN LYS ILE SER VAL SEQRES 26 A 352 VAL GLU SER PHE LEU LYS GLN ASP TYR ARG LEU GLY PHE SEQRES 27 A 352 THR TYR GLU GLN THR MET GLU LEU ILE GLY GLU THR ILE SEQRES 28 A 352 ARG SEQRES 1 B 352 ASN ALA GLN PHE LEU HIS THR GLN VAL GLY ARG GLY LEU SEQRES 2 B 352 LEU GLY ALA VAL VAL ASN PRO LEU GLY GLU VAL THR ASP SEQRES 3 B 352 LYS PHE ALA VAL THR ASP ASN SER GLU ILE LEU TYR ARG SEQRES 4 B 352 PRO VAL ASP ASN ALA PRO PRO LEU TYR SER GLU ARG ALA SEQRES 5 B 352 ALA ILE GLU LYS PRO PHE LEU THR GLY ILE LYS VAL ILE SEQRES 6 B 352 ASP SER LEU LEU THR CYS GLY GLU GLY GLN ARG MET GLY SEQRES 7 B 352 ILE PHE ALA SER ALA GLY CYS GLY LYS THR PHE LEU MET SEQRES 8 B 352 ASN MET LEU ILE GLU HIS SER GLY ALA ASP ILE TYR VAL SEQRES 9 B 352 ILE GLY LEU ILE GLY ALA ARG GLY ARG GLU VAL THR GLU SEQRES 10 B 352 THR VAL ASP TYR LEU LYS ASN SER GLU LYS LYS SER ARG SEQRES 11 B 352 CYS VAL LEU VAL TYR ALA THR SER ASP TYR SER SER VAL SEQRES 12 B 352 ASP ARG CYS ASN ALA ALA TYR ILE ALA THR ALA ILE ALA SEQRES 13 B 352 GLU PHE PHE ARG THR GLU GLY HIS LYS VAL ALA LEU PHE SEQRES 14 B 352 ILE ASP SER LEU THR ARG TYR ALA ARG ALA LEU ARG ASP SEQRES 15 B 352 VAL ALA LEU ALA ALA GLY GLU SER PRO ALA ARG ARG GLY SEQRES 16 B 352 TYR PRO VAL SER VAL PHE ASP SER LEU PRO ARG LEU LEU SEQRES 17 B 352 GLU ARG PRO GLY LYS LEU LYS ALA GLY GLY SER ILE THR SEQRES 18 B 352 ALA PHE TYR THR VAL LEU LEU GLU ASP ASP ASP PHE ALA SEQRES 19 B 352 ASP PRO LEU ALA GLU GLU VAL ARG SER ILE LEU ASP GLY SEQRES 20 B 352 HIS ILE TYR LEU SER ARG ASN LEU ALA GLN LYS GLY GLN SEQRES 21 B 352 PHE PRO ALA ILE ASP SER LEU LYS SER ILE SER ARG VAL SEQRES 22 B 352 PHE THR GLN VAL VAL ASP GLU LYS HIS ARG ILE MET ALA SEQRES 23 B 352 ALA ALA PHE ARG GLU LEU LEU SER GLU ILE GLU GLU LEU SEQRES 24 B 352 ARG THR ILE ILE ASP PHE GLY GLU TYR LYS PRO GLY GLU SEQRES 25 B 352 ASN ALA SER GLN ASP LYS ILE TYR ASN LYS ILE SER VAL SEQRES 26 B 352 VAL GLU SER PHE LEU LYS GLN ASP TYR ARG LEU GLY PHE SEQRES 27 B 352 THR TYR GLU GLN THR MET GLU LEU ILE GLY GLU THR ILE SEQRES 28 B 352 ARG HET SO4 A 501 5 HET SO4 B 501 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *106(H2 O) HELIX 1 AA1 GLY A 88 LEU A 92 5 5 HELIX 2 AA2 LEU A 125 ARG A 129 5 5 HELIX 3 AA3 ILE A 140 LEU A 147 1 8 HELIX 4 AA4 GLY A 164 SER A 176 1 13 HELIX 5 AA5 ARG A 189 LYS A 201 1 13 HELIX 6 AA6 LYS A 205 SER A 207 5 3 HELIX 7 AA7 SER A 219 GLU A 240 1 22 HELIX 8 AA8 SER A 250 GLY A 266 1 17 HELIX 9 AA9 SER A 277 PHE A 279 5 3 HELIX 10 AB1 ASP A 280 GLU A 287 1 8 HELIX 11 AB2 PRO A 314 LEU A 323 1 10 HELIX 12 AB3 SER A 330 LYS A 336 1 7 HELIX 13 AB4 ASP A 343 SER A 347 5 5 HELIX 14 AB5 VAL A 351 VAL A 356 1 6 HELIX 15 AB6 ASP A 357 PHE A 383 1 27 HELIX 16 AB7 ASN A 391 ASN A 399 1 9 HELIX 17 AB8 LYS A 400 LYS A 409 1 10 HELIX 18 AB9 THR A 417 ILE A 429 1 13 HELIX 19 AC1 GLY B 88 LEU B 92 5 5 HELIX 20 AC2 LEU B 125 ARG B 129 5 5 HELIX 21 AC3 ILE B 140 LEU B 147 1 8 HELIX 22 AC4 GLY B 164 SER B 176 1 13 HELIX 23 AC5 ARG B 189 LYS B 201 1 13 HELIX 24 AC6 LYS B 205 SER B 207 5 3 HELIX 25 AC7 SER B 219 GLU B 240 1 22 HELIX 26 AC8 SER B 250 GLY B 266 1 17 HELIX 27 AC9 ASP B 280 GLU B 287 1 8 HELIX 28 AD1 ASP B 313 LEU B 323 1 11 HELIX 29 AD2 SER B 330 LYS B 336 1 7 HELIX 30 AD3 VAL B 351 VAL B 356 1 6 HELIX 31 AD4 ASP B 357 PHE B 383 1 27 HELIX 32 AD5 ASN B 391 LYS B 400 1 10 HELIX 33 AD6 LYS B 400 LYS B 409 1 10 HELIX 34 AD7 THR B 417 ILE B 429 1 13 SHEET 1 AA1 2 HIS A 84 VAL A 87 0 SHEET 2 AA1 2 LEU A 115 PRO A 118 -1 O ARG A 117 N THR A 85 SHEET 1 AA2 7 VAL A 102 LYS A 105 0 SHEET 2 AA2 7 ALA A 94 VAL A 96 -1 N VAL A 95 O ASP A 104 SHEET 3 AA2 7 CYS A 209 THR A 215 1 O LEU A 211 N VAL A 96 SHEET 4 AA2 7 ILE A 180 ALA A 188 1 N ILE A 183 O VAL A 212 SHEET 5 AA2 7 LYS A 243 ASP A 249 1 O ASP A 249 N ILE A 186 SHEET 6 AA2 7 SER A 297 LEU A 305 1 O PHE A 301 N ILE A 248 SHEET 7 AA2 7 GLY A 290 LYS A 291 -1 N GLY A 290 O ILE A 298 SHEET 1 AA3 9 VAL A 102 LYS A 105 0 SHEET 2 AA3 9 ALA A 94 VAL A 96 -1 N VAL A 95 O ASP A 104 SHEET 3 AA3 9 CYS A 209 THR A 215 1 O LEU A 211 N VAL A 96 SHEET 4 AA3 9 ILE A 180 ALA A 188 1 N ILE A 183 O VAL A 212 SHEET 5 AA3 9 LYS A 243 ASP A 249 1 O ASP A 249 N ILE A 186 SHEET 6 AA3 9 SER A 297 LEU A 305 1 O PHE A 301 N ILE A 248 SHEET 7 AA3 9 ARG A 154 ALA A 159 1 N MET A 155 O ALA A 300 SHEET 8 AA3 9 GLY A 325 TYR A 328 1 O ILE A 327 N GLY A 156 SHEET 9 AA3 9 ILE A 348 SER A 349 -1 O ILE A 348 N HIS A 326 SHEET 1 AA4 2 PRO A 135 PHE A 136 0 SHEET 2 AA4 2 CYS A 149 GLY A 150 -1 O CYS A 149 N PHE A 136 SHEET 1 AA5 2 HIS B 84 VAL B 87 0 SHEET 2 AA5 2 LEU B 115 PRO B 118 -1 O ARG B 117 N THR B 85 SHEET 1 AA6 7 VAL B 102 LYS B 105 0 SHEET 2 AA6 7 ALA B 94 VAL B 96 -1 N VAL B 95 O THR B 103 SHEET 3 AA6 7 CYS B 209 THR B 215 1 O LEU B 211 N VAL B 96 SHEET 4 AA6 7 ILE B 180 ALA B 188 1 N ILE B 183 O VAL B 210 SHEET 5 AA6 7 LYS B 243 ASP B 249 1 O ALA B 245 N VAL B 182 SHEET 6 AA6 7 SER B 297 LEU B 305 1 O PHE B 301 N ILE B 248 SHEET 7 AA6 7 GLY B 290 LYS B 291 -1 N GLY B 290 O ILE B 298 SHEET 1 AA7 9 VAL B 102 LYS B 105 0 SHEET 2 AA7 9 ALA B 94 VAL B 96 -1 N VAL B 95 O THR B 103 SHEET 3 AA7 9 CYS B 209 THR B 215 1 O LEU B 211 N VAL B 96 SHEET 4 AA7 9 ILE B 180 ALA B 188 1 N ILE B 183 O VAL B 210 SHEET 5 AA7 9 LYS B 243 ASP B 249 1 O ALA B 245 N VAL B 182 SHEET 6 AA7 9 SER B 297 LEU B 305 1 O PHE B 301 N ILE B 248 SHEET 7 AA7 9 ARG B 154 ALA B 159 1 N MET B 155 O ALA B 300 SHEET 8 AA7 9 GLY B 325 TYR B 328 1 O ILE B 327 N GLY B 156 SHEET 9 AA7 9 ILE B 348 SER B 349 -1 O ILE B 348 N HIS B 326 SHEET 1 AA8 2 PRO B 135 PHE B 136 0 SHEET 2 AA8 2 CYS B 149 GLY B 150 -1 O CYS B 149 N PHE B 136 CISPEP 1 ASP A 249 SER A 250 0 1.26 CISPEP 2 PHE A 339 PRO A 340 0 -0.76 CISPEP 3 ASP B 249 SER B 250 0 3.37 CISPEP 4 PHE B 339 PRO B 340 0 -0.09 SITE 1 AC1 6 ALA A 161 GLY A 162 CYS A 163 GLY A 164 SITE 2 AC1 6 LYS A 165 THR A 166 SITE 1 AC2 6 GLY B 162 CYS B 163 GLY B 164 LYS B 165 SITE 2 AC2 6 THR B 166 HOH B 617 CRYST1 45.092 152.597 54.483 90.00 110.58 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022177 0.000000 0.008328 0.00000 SCALE2 0.000000 0.006553 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019606 0.00000