HEADER TRANSCRIPTION REGULATOR/DNA 15-AUG-16 5T00 TITLE HUMAN CTCF ZNF3-7 AND METHYLATED DNA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REPRESSOR CTCF; COMPND 3 CHAIN: A, D; COMPND 4 FRAGMENT: UNP RESIDUES 321-465; COMPND 5 SYNONYM: 11-ZINC FINGER PROTEIN,CCCTC-BINDING FACTOR,CTCFL PARALOG; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-TAG(5CM)GCCCCCTGCTGGC-3'); COMPND 9 CHAIN: B, E; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (5'-GCCAGCAGGGGG(5CM)GCTA-3'); COMPND 13 CHAIN: C, F; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CTCF; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VARIANT: CODON PLUS; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PGEX6P-1; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PXC1551; SOURCE 12 MOL_ID: 2; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 15 ORGANISM_TAXID: 32630; SOURCE 16 MOL_ID: 3; SOURCE 17 SYNTHETIC: YES; SOURCE 18 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 19 ORGANISM_TAXID: 32630 KEYWDS CCCTC-BINDING FACTOR, ZINC FINGER, CTCF, TRANSCRIPTION REGULATOR-DNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.HASHIMOTO,D.WANG,X.CHENG REVDAT 6 04-OCT-23 5T00 1 REMARK REVDAT 5 25-DEC-19 5T00 1 REMARK REVDAT 4 27-SEP-17 5T00 1 REMARK REVDAT 3 14-JUN-17 5T00 1 JRNL REVDAT 2 31-MAY-17 5T00 1 JRNL REVDAT 1 24-MAY-17 5T00 0 JRNL AUTH H.HASHIMOTO,D.WANG,J.R.HORTON,X.ZHANG,V.G.CORCES,X.CHENG JRNL TITL STRUCTURAL BASIS FOR THE VERSATILE AND METHYLATION-DEPENDENT JRNL TITL 2 BINDING OF CTCF TO DNA. JRNL REF MOL. CELL V. 66 711 2017 JRNL REFN ISSN 1097-4164 JRNL PMID 28529057 JRNL DOI 10.1016/J.MOLCEL.2017.05.004 REMARK 2 REMARK 2 RESOLUTION. 2.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2257: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.96 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 30975 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1553 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.9560 - 4.8683 0.99 2690 142 0.1660 0.1704 REMARK 3 2 4.8683 - 3.8650 1.00 2709 143 0.1825 0.2110 REMARK 3 3 3.8650 - 3.3767 0.99 2669 141 0.1997 0.2343 REMARK 3 4 3.3767 - 3.0680 0.98 2660 143 0.2346 0.2790 REMARK 3 5 3.0680 - 2.8482 1.00 2709 142 0.2617 0.2513 REMARK 3 6 2.8482 - 2.6803 1.00 2708 143 0.2729 0.3460 REMARK 3 7 2.6803 - 2.5461 1.00 2677 141 0.2726 0.2962 REMARK 3 8 2.5461 - 2.4353 1.00 2721 143 0.2922 0.3286 REMARK 3 9 2.4353 - 2.3415 1.00 2719 143 0.2884 0.3303 REMARK 3 10 2.3415 - 2.2607 1.00 2679 141 0.2922 0.3193 REMARK 3 11 2.2607 - 2.1900 0.91 2481 131 0.3204 0.3322 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.92 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3994 REMARK 3 ANGLE : 0.684 5606 REMARK 3 CHIRALITY : 0.041 595 REMARK 3 PLANARITY : 0.002 478 REMARK 3 DIHEDRAL : 20.961 2136 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 25 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 320:333) REMARK 3 ORIGIN FOR THE GROUP (A): 10.0369 -27.4025 -32.6371 REMARK 3 T TENSOR REMARK 3 T11: 1.2245 T22: 1.1774 REMARK 3 T33: 0.7508 T12: -0.0386 REMARK 3 T13: 0.1403 T23: -0.3321 REMARK 3 L TENSOR REMARK 3 L11: 1.2046 L22: 1.0548 REMARK 3 L33: 0.2519 L12: -0.9999 REMARK 3 L13: -0.5285 L23: 0.4151 REMARK 3 S TENSOR REMARK 3 S11: 0.0719 S12: 0.5252 S13: -0.5709 REMARK 3 S21: -0.9439 S22: 0.1776 S23: -0.0222 REMARK 3 S31: 0.5363 S32: 0.5195 S33: -0.0235 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 334:386) REMARK 3 ORIGIN FOR THE GROUP (A): -1.2909 -13.8856 -17.6348 REMARK 3 T TENSOR REMARK 3 T11: 0.5737 T22: 0.3363 REMARK 3 T33: 0.3374 T12: -0.0792 REMARK 3 T13: -0.0179 T23: -0.0120 REMARK 3 L TENSOR REMARK 3 L11: 2.4002 L22: 0.8647 REMARK 3 L33: 2.7747 L12: 0.7207 REMARK 3 L13: 1.0437 L23: 0.8303 REMARK 3 S TENSOR REMARK 3 S11: -0.4447 S12: 0.2404 S13: 0.1966 REMARK 3 S21: -0.3861 S22: 0.2760 S23: 0.1256 REMARK 3 S31: -0.6592 S32: 0.5534 S33: 0.1475 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 387:432) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6992 -32.9047 -11.2991 REMARK 3 T TENSOR REMARK 3 T11: 0.4766 T22: 0.2693 REMARK 3 T33: 0.3735 T12: 0.0370 REMARK 3 T13: -0.0542 T23: -0.0464 REMARK 3 L TENSOR REMARK 3 L11: 1.4534 L22: 2.0972 REMARK 3 L33: 2.5308 L12: -1.1665 REMARK 3 L13: 0.4828 L23: -0.6317 REMARK 3 S TENSOR REMARK 3 S11: 0.0996 S12: 0.2113 S13: 0.0668 REMARK 3 S21: -0.5899 S22: -0.0283 S23: 0.0700 REMARK 3 S31: -0.0033 S32: 0.0452 S33: -0.0761 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 433:458) REMARK 3 ORIGIN FOR THE GROUP (A): -6.5090 -34.9897 10.2057 REMARK 3 T TENSOR REMARK 3 T11: 0.2914 T22: 0.5081 REMARK 3 T33: 0.4447 T12: 0.1056 REMARK 3 T13: 0.0276 T23: -0.0947 REMARK 3 L TENSOR REMARK 3 L11: 2.0028 L22: 3.0707 REMARK 3 L33: 3.7682 L12: 0.9087 REMARK 3 L13: 0.8191 L23: -0.0357 REMARK 3 S TENSOR REMARK 3 S11: -0.0842 S12: -0.1744 S13: 0.2200 REMARK 3 S21: 0.1656 S22: 0.4129 S23: -0.0008 REMARK 3 S31: 0.2122 S32: 0.1667 S33: -0.3515 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 459:462) REMARK 3 ORIGIN FOR THE GROUP (A): -9.9441 -27.8538 17.9183 REMARK 3 T TENSOR REMARK 3 T11: 0.8253 T22: 0.9109 REMARK 3 T33: 0.7329 T12: 0.1859 REMARK 3 T13: 0.0584 T23: -0.3498 REMARK 3 L TENSOR REMARK 3 L11: 3.6397 L22: 2.5931 REMARK 3 L33: 6.1024 L12: 1.7385 REMARK 3 L13: -3.3329 L23: -3.9095 REMARK 3 S TENSOR REMARK 3 S11: -0.6369 S12: -0.5578 S13: 0.5221 REMARK 3 S21: 0.4604 S22: -0.3501 S23: 0.5947 REMARK 3 S31: -0.6201 S32: -0.1563 S33: 0.6179 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 1:4) REMARK 3 ORIGIN FOR THE GROUP (A): -2.9848 -11.7107 -28.3523 REMARK 3 T TENSOR REMARK 3 T11: 1.1026 T22: 1.0312 REMARK 3 T33: 0.7674 T12: -0.2751 REMARK 3 T13: -0.0744 T23: 0.2541 REMARK 3 L TENSOR REMARK 3 L11: 3.2429 L22: 1.2303 REMARK 3 L33: 1.0786 L12: 0.9846 REMARK 3 L13: -0.8237 L23: -0.1657 REMARK 3 S TENSOR REMARK 3 S11: -0.4287 S12: 0.3830 S13: 0.8435 REMARK 3 S21: 0.2354 S22: -0.0189 S23: -0.4114 REMARK 3 S31: -0.2804 S32: 0.4365 S33: 0.2893 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 5:9) REMARK 3 ORIGIN FOR THE GROUP (A): -7.5956 -25.4680 -20.0907 REMARK 3 T TENSOR REMARK 3 T11: 0.7958 T22: 0.5970 REMARK 3 T33: 0.5288 T12: -0.1435 REMARK 3 T13: 0.0866 T23: 0.1110 REMARK 3 L TENSOR REMARK 3 L11: 1.9371 L22: 4.7296 REMARK 3 L33: 4.9503 L12: -0.0470 REMARK 3 L13: 0.4998 L23: 0.2552 REMARK 3 S TENSOR REMARK 3 S11: -0.1810 S12: 0.9140 S13: 0.4505 REMARK 3 S21: -0.6480 S22: 0.6086 S23: 0.3902 REMARK 3 S31: 0.1269 S32: -0.4525 S33: -0.4391 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 10:13) REMARK 3 ORIGIN FOR THE GROUP (A): -6.4055 -26.4536 -2.3391 REMARK 3 T TENSOR REMARK 3 T11: 0.3640 T22: 0.6560 REMARK 3 T33: 0.5474 T12: 0.0003 REMARK 3 T13: 0.0015 T23: 0.0234 REMARK 3 L TENSOR REMARK 3 L11: 3.4100 L22: 4.1645 REMARK 3 L33: 4.4585 L12: 0.0628 REMARK 3 L13: -1.9647 L23: -0.6898 REMARK 3 S TENSOR REMARK 3 S11: 0.3468 S12: -1.3118 S13: 0.7359 REMARK 3 S21: -0.2502 S22: 0.3733 S23: -0.2153 REMARK 3 S31: 0.1140 S32: 0.7934 S33: -0.6954 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 14:17) REMARK 3 ORIGIN FOR THE GROUP (A): -21.5072 -30.8770 4.1721 REMARK 3 T TENSOR REMARK 3 T11: 0.2753 T22: 0.4352 REMARK 3 T33: 0.5422 T12: 0.0376 REMARK 3 T13: 0.0539 T23: 0.0741 REMARK 3 L TENSOR REMARK 3 L11: 1.0106 L22: 2.5146 REMARK 3 L33: 2.8000 L12: -0.3064 REMARK 3 L13: -0.1952 L23: -1.3486 REMARK 3 S TENSOR REMARK 3 S11: 0.0321 S12: -0.9039 S13: 0.2642 REMARK 3 S21: -0.2938 S22: 0.2461 S23: 0.6078 REMARK 3 S31: 0.0788 S32: -0.4895 S33: -0.3174 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN C AND RESID 1:5) REMARK 3 ORIGIN FOR THE GROUP (A): -15.7613 -36.0219 1.3438 REMARK 3 T TENSOR REMARK 3 T11: 0.1664 T22: 0.2515 REMARK 3 T33: 0.4407 T12: 0.0324 REMARK 3 T13: 0.0082 T23: 0.0612 REMARK 3 L TENSOR REMARK 3 L11: 3.8850 L22: 3.0919 REMARK 3 L33: 3.3568 L12: -0.2593 REMARK 3 L13: -0.7008 L23: -0.9045 REMARK 3 S TENSOR REMARK 3 S11: 0.1204 S12: -0.4211 S13: -0.0597 REMARK 3 S21: -0.2693 S22: -0.5192 S23: -0.1288 REMARK 3 S31: 0.2937 S32: 0.2871 S33: 0.3107 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN C AND RESID 6:11) REMARK 3 ORIGIN FOR THE GROUP (A): -8.0550 -21.1680 -9.4473 REMARK 3 T TENSOR REMARK 3 T11: 0.4539 T22: 0.3579 REMARK 3 T33: 0.3861 T12: -0.0031 REMARK 3 T13: -0.0138 T23: 0.0408 REMARK 3 L TENSOR REMARK 3 L11: 1.6509 L22: 2.9612 REMARK 3 L33: 2.3441 L12: 0.2951 REMARK 3 L13: -0.5820 L23: 0.3256 REMARK 3 S TENSOR REMARK 3 S11: -0.0121 S12: -0.0782 S13: 0.2422 REMARK 3 S21: -0.5581 S22: 0.2580 S23: 0.3626 REMARK 3 S31: 0.0393 S32: 0.2154 S33: -0.1893 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN C AND RESID 12:17) REMARK 3 ORIGIN FOR THE GROUP (A): -2.1941 -20.8867 -29.8417 REMARK 3 T TENSOR REMARK 3 T11: 0.7982 T22: 1.2178 REMARK 3 T33: 0.4976 T12: -0.2145 REMARK 3 T13: 0.0598 T23: 0.1719 REMARK 3 L TENSOR REMARK 3 L11: 0.7373 L22: 1.9869 REMARK 3 L33: 5.5086 L12: 1.0923 REMARK 3 L13: 1.6855 L23: 2.1199 REMARK 3 S TENSOR REMARK 3 S11: 0.3284 S12: 1.2269 S13: -0.0090 REMARK 3 S21: -0.5157 S22: 0.5703 S23: 0.3399 REMARK 3 S31: 0.1808 S32: 0.1259 S33: -0.5651 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN D AND RESID 322:343) REMARK 3 ORIGIN FOR THE GROUP (A): -11.1181 -26.4945 35.4436 REMARK 3 T TENSOR REMARK 3 T11: 0.8524 T22: 1.3439 REMARK 3 T33: 1.0190 T12: -0.5728 REMARK 3 T13: -0.1224 T23: 0.5542 REMARK 3 L TENSOR REMARK 3 L11: 1.6861 L22: 6.3279 REMARK 3 L33: 1.0131 L12: -1.8171 REMARK 3 L13: -1.0792 L23: 0.0078 REMARK 3 S TENSOR REMARK 3 S11: -0.1668 S12: 0.2709 S13: -0.8327 REMARK 3 S21: -0.4557 S22: 0.0551 S23: 0.7836 REMARK 3 S31: 0.1350 S32: -0.3948 S33: -0.5425 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN D AND RESID 344:348) REMARK 3 ORIGIN FOR THE GROUP (A): -16.0480 -18.0738 33.7067 REMARK 3 T TENSOR REMARK 3 T11: 0.7142 T22: 1.3268 REMARK 3 T33: 1.0690 T12: -0.0547 REMARK 3 T13: 0.1994 T23: 0.1487 REMARK 3 L TENSOR REMARK 3 L11: 0.0814 L22: 0.1289 REMARK 3 L33: 0.1156 L12: -0.0618 REMARK 3 L13: -0.0385 L23: 0.0707 REMARK 3 S TENSOR REMARK 3 S11: 0.8854 S12: -0.9334 S13: 0.8096 REMARK 3 S21: 0.0087 S22: 0.6250 S23: 0.7381 REMARK 3 S31: -0.7264 S32: -0.2003 S33: -1.1248 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN D AND RESID 349:383) REMARK 3 ORIGIN FOR THE GROUP (A): -2.3542 -5.2158 40.7518 REMARK 3 T TENSOR REMARK 3 T11: 0.9952 T22: 1.3652 REMARK 3 T33: 0.7253 T12: -0.3462 REMARK 3 T13: 0.1498 T23: 0.1597 REMARK 3 L TENSOR REMARK 3 L11: 1.2049 L22: 1.1984 REMARK 3 L33: 1.5337 L12: 0.8488 REMARK 3 L13: -0.7791 L23: -0.8334 REMARK 3 S TENSOR REMARK 3 S11: 0.4936 S12: -1.0326 S13: 0.3455 REMARK 3 S21: 0.9374 S22: -0.3678 S23: 0.2435 REMARK 3 S31: -0.3444 S32: 0.0733 S33: -0.1623 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN D AND RESID 384:459) REMARK 3 ORIGIN FOR THE GROUP (A): 8.2339 -4.0714 17.2915 REMARK 3 T TENSOR REMARK 3 T11: 0.3986 T22: 0.4344 REMARK 3 T33: 0.4864 T12: -0.0186 REMARK 3 T13: 0.0125 T23: 0.0520 REMARK 3 L TENSOR REMARK 3 L11: 2.8174 L22: 4.6000 REMARK 3 L33: 3.3008 L12: 0.7281 REMARK 3 L13: -0.3548 L23: -1.0871 REMARK 3 S TENSOR REMARK 3 S11: 0.3607 S12: -0.4789 S13: -0.4420 REMARK 3 S21: 0.0491 S22: -0.6304 S23: -0.2605 REMARK 3 S31: 0.6043 S32: 0.1442 S33: 0.2662 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: (CHAIN D AND RESID 460:464) REMARK 3 ORIGIN FOR THE GROUP (A): 0.8439 20.8803 13.8000 REMARK 3 T TENSOR REMARK 3 T11: 0.7245 T22: 0.5093 REMARK 3 T33: 1.2083 T12: -0.0214 REMARK 3 T13: 0.0774 T23: -0.1170 REMARK 3 L TENSOR REMARK 3 L11: 1.8402 L22: 3.9325 REMARK 3 L33: 3.3764 L12: -2.6326 REMARK 3 L13: 0.0720 L23: 0.6509 REMARK 3 S TENSOR REMARK 3 S11: -0.6874 S12: -0.3566 S13: 1.5460 REMARK 3 S21: 1.1447 S22: 0.0078 S23: 0.2259 REMARK 3 S31: -1.5465 S32: -0.4639 S33: 0.4480 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: (CHAIN E AND RESID 1:4) REMARK 3 ORIGIN FOR THE GROUP (A): -2.1164 -18.0121 46.0708 REMARK 3 T TENSOR REMARK 3 T11: 0.8379 T22: 1.7643 REMARK 3 T33: 0.8714 T12: -0.5882 REMARK 3 T13: 0.3132 T23: 0.6728 REMARK 3 L TENSOR REMARK 3 L11: 2.0993 L22: 0.2091 REMARK 3 L33: 4.2469 L12: 0.1398 REMARK 3 L13: -2.9934 L23: -0.1730 REMARK 3 S TENSOR REMARK 3 S11: -0.0220 S12: -0.9468 S13: 0.0942 REMARK 3 S21: 0.7605 S22: -0.0972 S23: 0.2775 REMARK 3 S31: -0.1445 S32: 0.1697 S33: -0.1564 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: (CHAIN E AND RESID 5:9) REMARK 3 ORIGIN FOR THE GROUP (A): 4.4925 -16.6604 30.5653 REMARK 3 T TENSOR REMARK 3 T11: 0.7137 T22: 1.0075 REMARK 3 T33: 0.5798 T12: -0.3053 REMARK 3 T13: -0.0334 T23: 0.2694 REMARK 3 L TENSOR REMARK 3 L11: 3.2900 L22: 6.1862 REMARK 3 L33: 6.8476 L12: -4.3535 REMARK 3 L13: 0.4266 L23: -2.2352 REMARK 3 S TENSOR REMARK 3 S11: 1.3180 S12: -1.1220 S13: -0.5586 REMARK 3 S21: 0.7703 S22: -1.1167 S23: -0.1879 REMARK 3 S31: -0.1093 S32: 1.5073 S33: 0.2468 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: (CHAIN E AND RESID 10:13) REMARK 3 ORIGIN FOR THE GROUP (A): 1.6193 -0.8969 21.8341 REMARK 3 T TENSOR REMARK 3 T11: 0.5409 T22: 0.7962 REMARK 3 T33: 0.6844 T12: -0.0676 REMARK 3 T13: 0.1186 T23: 0.1907 REMARK 3 L TENSOR REMARK 3 L11: 3.7855 L22: 2.4556 REMARK 3 L33: 2.6590 L12: 0.1879 REMARK 3 L13: -0.8827 L23: -1.4990 REMARK 3 S TENSOR REMARK 3 S11: 0.3194 S12: -0.2839 S13: 0.9878 REMARK 3 S21: -0.2539 S22: 0.1132 S23: 1.1441 REMARK 3 S31: 0.3059 S32: -0.6723 S33: -0.4522 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: (CHAIN E AND RESID 14:17) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7896 5.0436 16.7670 REMARK 3 T TENSOR REMARK 3 T11: 0.2957 T22: 0.6275 REMARK 3 T33: 0.4820 T12: -0.0147 REMARK 3 T13: 0.0425 T23: 0.0921 REMARK 3 L TENSOR REMARK 3 L11: 5.8124 L22: 4.5007 REMARK 3 L33: 2.8933 L12: 0.7238 REMARK 3 L13: 0.2354 L23: -1.0679 REMARK 3 S TENSOR REMARK 3 S11: 0.3456 S12: -1.1435 S13: 0.3602 REMARK 3 S21: 0.1883 S22: -0.5192 S23: 0.3411 REMARK 3 S31: -0.4684 S32: 0.8693 S33: 0.1340 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: (CHAIN F AND RESID 1:4) REMARK 3 ORIGIN FOR THE GROUP (A): 11.9572 0.8220 10.8159 REMARK 3 T TENSOR REMARK 3 T11: 0.3194 T22: 0.4161 REMARK 3 T33: 0.5163 T12: 0.0442 REMARK 3 T13: 0.0104 T23: 0.0924 REMARK 3 L TENSOR REMARK 3 L11: 1.9413 L22: 2.9293 REMARK 3 L33: 2.3466 L12: -1.4662 REMARK 3 L13: 0.5533 L23: -1.8113 REMARK 3 S TENSOR REMARK 3 S11: 0.3508 S12: -0.5340 S13: 0.2012 REMARK 3 S21: -0.5593 S22: -0.4917 S23: -0.4246 REMARK 3 S31: 0.5001 S32: -0.0237 S33: 0.0441 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: (CHAIN F AND RESID 5:8) REMARK 3 ORIGIN FOR THE GROUP (A): 10.0570 -2.7563 25.4086 REMARK 3 T TENSOR REMARK 3 T11: 0.5688 T22: 0.7708 REMARK 3 T33: 0.5177 T12: -0.1348 REMARK 3 T13: 0.0158 T23: 0.1680 REMARK 3 L TENSOR REMARK 3 L11: 5.1316 L22: 2.5204 REMARK 3 L33: 4.4355 L12: 1.4446 REMARK 3 L13: -2.1419 L23: -1.5579 REMARK 3 S TENSOR REMARK 3 S11: 1.0019 S12: -0.7391 S13: -0.1114 REMARK 3 S21: 0.9711 S22: -0.5486 S23: -0.3105 REMARK 3 S31: 0.1692 S32: -0.2149 S33: -0.3282 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: (CHAIN F AND RESID 9:13) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1774 -12.0841 31.8924 REMARK 3 T TENSOR REMARK 3 T11: 0.7673 T22: 0.9405 REMARK 3 T33: 0.5656 T12: -0.2099 REMARK 3 T13: 0.1801 T23: 0.2191 REMARK 3 L TENSOR REMARK 3 L11: 4.4919 L22: 1.6557 REMARK 3 L33: 1.7540 L12: 1.0621 REMARK 3 L13: 0.3628 L23: -1.0384 REMARK 3 S TENSOR REMARK 3 S11: 0.9222 S12: -1.0776 S13: 0.2711 REMARK 3 S21: 0.5037 S22: -0.6027 S23: -0.0705 REMARK 3 S31: -0.3390 S32: -0.1502 S33: -0.2821 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: (CHAIN F AND RESID 14:17) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0477 -25.8169 42.4102 REMARK 3 T TENSOR REMARK 3 T11: 1.1680 T22: 1.2767 REMARK 3 T33: 0.8974 T12: -0.1736 REMARK 3 T13: 0.1214 T23: 0.5386 REMARK 3 L TENSOR REMARK 3 L11: 2.0378 L22: 1.5352 REMARK 3 L33: 0.3486 L12: 0.1713 REMARK 3 L13: -0.1214 L23: -0.7280 REMARK 3 S TENSOR REMARK 3 S11: 0.6665 S12: -0.3943 S13: -0.1742 REMARK 3 S21: -0.1461 S22: 0.2911 S23: 0.4388 REMARK 3 S31: 0.3389 S32: -0.6102 S33: -0.6709 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5T00 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1000223376. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31307 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.180 REMARK 200 RESOLUTION RANGE LOW (A) : 41.956 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10900 REMARK 200 FOR THE DATA SET : 6.5600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.68300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5KKQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% (W/V) PEG 3350, 0.2 M NACL, 0.1 M REMARK 280 HEPES-NAOH, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 316 REMARK 465 PRO A 317 REMARK 465 LEU A 318 REMARK 465 GLY A 319 REMARK 465 ILE A 463 REMARK 465 GLU A 464 REMARK 465 GLN A 465 REMARK 465 GLY D 316 REMARK 465 PRO D 317 REMARK 465 LEU D 318 REMARK 465 GLY D 319 REMARK 465 SER D 320 REMARK 465 PRO D 321 REMARK 465 GLN D 465 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 320 OG REMARK 470 LYS D 323 CG CD CE NZ REMARK 470 LYS D 349 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HB2 CYS D 327 ZN ZN D 501 1.27 REMARK 500 HE1 HIS D 401 ZN ZN D 503 1.33 REMARK 500 H22 DG B 12 O2 DC C 6 1.50 REMARK 500 HZ2 LYS A 405 OP1 DG C 5 1.52 REMARK 500 H22 DG E 15 O2 DC F 3 1.53 REMARK 500 NE2 HIS D 369 ZN ZN D 502 1.54 REMARK 500 HD1 HIS A 397 OP1 DA C 7 1.57 REMARK 500 O2 DC E 10 H22 DG F 8 1.58 REMARK 500 H22 DG E 5 O2 5CM F 13 1.58 REMARK 500 O ARG A 341 H THR A 346 1.58 REMARK 500 O2 DC B 7 H22 DG C 11 1.58 REMARK 500 O2 DC B 13 H22 DG C 5 1.58 REMARK 500 HH TYR A 407 OP2 DC B 8 1.59 REMARK 500 OP2 DT E 11 O HOH E 101 2.06 REMARK 500 OP1 DC F 2 O HOH F 101 2.16 REMARK 500 OP2 DG F 10 O HOH F 102 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 460 -75.26 -83.52 REMARK 500 SER A 461 -24.18 -146.26 REMARK 500 CYS D 356 -168.88 -161.18 REMARK 500 ILE D 411 -60.68 -105.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 324 SG REMARK 620 2 CYS A 327 SG 114.1 REMARK 620 3 HIS A 340 NE2 110.1 114.5 REMARK 620 4 HIS A 345 NE2 92.7 103.0 120.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 353 SG REMARK 620 2 CYS A 356 SG 117.9 REMARK 620 3 HIS A 369 NE2 123.2 84.1 REMARK 620 4 HIS A 373 NE2 120.1 115.1 87.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 381 SG REMARK 620 2 CYS A 384 SG 119.3 REMARK 620 3 HIS A 397 NE2 98.3 108.8 REMARK 620 4 HIS A 401 NE2 119.1 105.8 103.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 504 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 409 SG REMARK 620 2 CYS A 412 SG 125.8 REMARK 620 3 HIS A 425 NE2 121.3 90.9 REMARK 620 4 HIS A 430 NE2 110.4 105.0 99.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 505 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 439 SG REMARK 620 2 CYS A 442 SG 113.5 REMARK 620 3 HIS A 455 NE2 100.0 91.8 REMARK 620 4 HIS A 460 NE2 89.3 151.6 100.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 324 SG REMARK 620 2 CYS D 327 SG 145.3 REMARK 620 3 HIS D 340 NE2 110.8 98.2 REMARK 620 4 HIS D 345 NE2 77.6 126.8 81.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 353 SG REMARK 620 2 CYS D 356 SG 97.5 REMARK 620 3 HIS D 373 NE2 130.5 85.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 381 SG REMARK 620 2 CYS D 384 SG 103.5 REMARK 620 3 HIS D 397 NE2 86.2 78.1 REMARK 620 4 HIS D 401 NE2 139.3 106.2 126.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 504 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 409 SG REMARK 620 2 CYS D 412 SG 114.1 REMARK 620 3 HIS D 425 NE2 106.0 111.7 REMARK 620 4 HIS D 430 NE2 100.4 114.2 109.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 505 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 439 SG REMARK 620 2 CYS D 442 SG 126.9 REMARK 620 3 HIS D 455 NE2 102.0 100.9 REMARK 620 4 HIS D 460 NE2 91.6 132.4 96.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5T0U RELATED DB: PDB DBREF 5T00 A 321 465 UNP P49711 CTCF_HUMAN 321 465 DBREF 5T00 B 1 17 PDB 5T00 5T00 1 17 DBREF 5T00 C 1 17 PDB 5T00 5T00 1 17 DBREF 5T00 D 321 465 UNP P49711 CTCF_HUMAN 321 465 DBREF 5T00 E 1 17 PDB 5T00 5T00 1 17 DBREF 5T00 F 1 17 PDB 5T00 5T00 1 17 SEQADV 5T00 GLY A 316 UNP P49711 EXPRESSION TAG SEQADV 5T00 PRO A 317 UNP P49711 EXPRESSION TAG SEQADV 5T00 LEU A 318 UNP P49711 EXPRESSION TAG SEQADV 5T00 GLY A 319 UNP P49711 EXPRESSION TAG SEQADV 5T00 SER A 320 UNP P49711 EXPRESSION TAG SEQADV 5T00 GLY D 316 UNP P49711 EXPRESSION TAG SEQADV 5T00 PRO D 317 UNP P49711 EXPRESSION TAG SEQADV 5T00 LEU D 318 UNP P49711 EXPRESSION TAG SEQADV 5T00 GLY D 319 UNP P49711 EXPRESSION TAG SEQADV 5T00 SER D 320 UNP P49711 EXPRESSION TAG SEQRES 1 A 150 GLY PRO LEU GLY SER PRO HIS LYS CYS PRO ASP CYS ASP SEQRES 2 A 150 MET ALA PHE VAL THR SER GLY GLU LEU VAL ARG HIS ARG SEQRES 3 A 150 ARG TYR LYS HIS THR HIS GLU LYS PRO PHE LYS CYS SER SEQRES 4 A 150 MET CYS ASP TYR ALA SER VAL GLU VAL SER LYS LEU LYS SEQRES 5 A 150 ARG HIS ILE ARG SER HIS THR GLY GLU ARG PRO PHE GLN SEQRES 6 A 150 CYS SER LEU CYS SER TYR ALA SER ARG ASP THR TYR LYS SEQRES 7 A 150 LEU LYS ARG HIS MET ARG THR HIS SER GLY GLU LYS PRO SEQRES 8 A 150 TYR GLU CYS TYR ILE CYS HIS ALA ARG PHE THR GLN SER SEQRES 9 A 150 GLY THR MET LYS MET HIS ILE LEU GLN LYS HIS THR GLU SEQRES 10 A 150 ASN VAL ALA LYS PHE HIS CYS PRO HIS CYS ASP THR VAL SEQRES 11 A 150 ILE ALA ARG LYS SER ASP LEU GLY VAL HIS LEU ARG LYS SEQRES 12 A 150 GLN HIS SER TYR ILE GLU GLN SEQRES 1 B 17 DT DA DG 5CM DG DC DC DC DC DC DT DG DC SEQRES 2 B 17 DT DG DG DC SEQRES 1 C 17 DG DC DC DA DG DC DA DG DG DG DG DG 5CM SEQRES 2 C 17 DG DC DT DA SEQRES 1 D 150 GLY PRO LEU GLY SER PRO HIS LYS CYS PRO ASP CYS ASP SEQRES 2 D 150 MET ALA PHE VAL THR SER GLY GLU LEU VAL ARG HIS ARG SEQRES 3 D 150 ARG TYR LYS HIS THR HIS GLU LYS PRO PHE LYS CYS SER SEQRES 4 D 150 MET CYS ASP TYR ALA SER VAL GLU VAL SER LYS LEU LYS SEQRES 5 D 150 ARG HIS ILE ARG SER HIS THR GLY GLU ARG PRO PHE GLN SEQRES 6 D 150 CYS SER LEU CYS SER TYR ALA SER ARG ASP THR TYR LYS SEQRES 7 D 150 LEU LYS ARG HIS MET ARG THR HIS SER GLY GLU LYS PRO SEQRES 8 D 150 TYR GLU CYS TYR ILE CYS HIS ALA ARG PHE THR GLN SER SEQRES 9 D 150 GLY THR MET LYS MET HIS ILE LEU GLN LYS HIS THR GLU SEQRES 10 D 150 ASN VAL ALA LYS PHE HIS CYS PRO HIS CYS ASP THR VAL SEQRES 11 D 150 ILE ALA ARG LYS SER ASP LEU GLY VAL HIS LEU ARG LYS SEQRES 12 D 150 GLN HIS SER TYR ILE GLU GLN SEQRES 1 E 17 DT DA DG 5CM DG DC DC DC DC DC DT DG DC SEQRES 2 E 17 DT DG DG DC SEQRES 1 F 17 DG DC DC DA DG DC DA DG DG DG DG DG 5CM SEQRES 2 F 17 DG DC DT DA HET 5CM B 4 33 HET 5CM C 13 33 HET 5CM E 4 33 HET 5CM F 13 33 HET ZN A 501 1 HET ZN A 502 1 HET ZN A 503 1 HET ZN A 504 1 HET ZN A 505 1 HET ZN D 501 1 HET ZN D 502 1 HET ZN D 503 1 HET ZN D 504 1 HET ZN D 505 1 HETNAM 5CM 5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE HETNAM ZN ZINC ION FORMUL 2 5CM 4(C10 H16 N3 O7 P) FORMUL 7 ZN 10(ZN 2+) FORMUL 17 HOH *97(H2 O) HELIX 1 AA1 THR A 333 HIS A 345 1 13 HELIX 2 AA2 GLU A 362 GLY A 375 1 14 HELIX 3 AA3 ASP A 390 GLY A 403 1 14 HELIX 4 AA4 GLN A 418 HIS A 430 1 13 HELIX 5 AA5 ARG A 448 GLN A 459 1 12 HELIX 6 AA6 THR D 333 HIS D 345 1 13 HELIX 7 AA7 GLU D 362 GLY D 375 1 14 HELIX 8 AA8 ASP D 390 GLY D 403 1 14 HELIX 9 AA9 GLN D 418 HIS D 430 1 13 HELIX 10 AB1 ARG D 448 HIS D 460 1 13 SHEET 1 AA1 2 HIS A 322 LYS A 323 0 SHEET 2 AA1 2 ALA A 330 PHE A 331 -1 O PHE A 331 N HIS A 322 SHEET 1 AA2 2 PHE A 351 LYS A 352 0 SHEET 2 AA2 2 ALA A 359 SER A 360 -1 O SER A 360 N PHE A 351 SHEET 1 AA3 2 PHE A 379 GLN A 380 0 SHEET 2 AA3 2 ALA A 387 SER A 388 -1 O SER A 388 N PHE A 379 SHEET 1 AA4 2 TYR A 407 GLU A 408 0 SHEET 2 AA4 2 ARG A 415 PHE A 416 -1 O PHE A 416 N TYR A 407 SHEET 1 AA5 2 PHE A 437 HIS A 438 0 SHEET 2 AA5 2 VAL A 445 ILE A 446 -1 O ILE A 446 N PHE A 437 SHEET 1 AA6 2 PHE D 351 LYS D 352 0 SHEET 2 AA6 2 ALA D 359 SER D 360 -1 O SER D 360 N PHE D 351 SHEET 1 AA7 2 PHE D 379 GLN D 380 0 SHEET 2 AA7 2 ALA D 387 SER D 388 -1 O SER D 388 N PHE D 379 SHEET 1 AA8 2 TYR D 407 GLU D 408 0 SHEET 2 AA8 2 ARG D 415 PHE D 416 -1 O PHE D 416 N TYR D 407 SHEET 1 AA9 2 PHE D 437 HIS D 438 0 SHEET 2 AA9 2 VAL D 445 ILE D 446 -1 O ILE D 446 N PHE D 437 LINK O3' DG B 3 P 5CM B 4 1555 1555 1.61 LINK O3' 5CM B 4 P DG B 5 1555 1555 1.61 LINK O3' DG C 12 P 5CM C 13 1555 1555 1.61 LINK O3' 5CM C 13 P DG C 14 1555 1555 1.61 LINK O3' DG E 3 P 5CM E 4 1555 1555 1.61 LINK O3' 5CM E 4 P DG E 5 1555 1555 1.61 LINK O3' DG F 12 P 5CM F 13 1555 1555 1.61 LINK O3' 5CM F 13 P DG F 14 1555 1555 1.61 LINK SG CYS A 324 ZN ZN A 501 1555 1555 2.33 LINK SG CYS A 327 ZN ZN A 501 1555 1555 2.33 LINK NE2 HIS A 340 ZN ZN A 501 1555 1555 2.04 LINK NE2 HIS A 345 ZN ZN A 501 1555 1555 2.03 LINK SG CYS A 353 ZN ZN A 502 1555 1555 2.28 LINK SG CYS A 356 ZN ZN A 502 1555 1555 2.31 LINK NE2 HIS A 369 ZN ZN A 502 1555 1555 2.02 LINK NE2 HIS A 373 ZN ZN A 502 1555 1555 2.04 LINK SG CYS A 381 ZN ZN A 503 1555 1555 2.25 LINK SG CYS A 384 ZN ZN A 503 1555 1555 2.26 LINK NE2 HIS A 397 ZN ZN A 503 1555 1555 2.04 LINK NE2 HIS A 401 ZN ZN A 503 1555 1555 2.03 LINK SG CYS A 409 ZN ZN A 504 1555 1555 2.27 LINK SG CYS A 412 ZN ZN A 504 1555 1555 2.25 LINK NE2 HIS A 425 ZN ZN A 504 1555 1555 2.04 LINK NE2 HIS A 430 ZN ZN A 504 1555 1555 1.98 LINK SG CYS A 439 ZN ZN A 505 1555 1555 2.24 LINK SG CYS A 442 ZN ZN A 505 1555 1555 2.24 LINK NE2 HIS A 455 ZN ZN A 505 1555 1555 1.97 LINK NE2 HIS A 460 ZN ZN A 505 1555 1555 2.02 LINK SG CYS D 324 ZN ZN D 501 1555 1555 2.41 LINK SG CYS D 327 ZN ZN D 501 1555 1555 2.44 LINK NE2 HIS D 340 ZN ZN D 501 1555 1555 2.02 LINK NE2 HIS D 345 ZN ZN D 501 1555 1555 2.04 LINK SG CYS D 353 ZN ZN D 502 1555 1555 2.35 LINK SG CYS D 356 ZN ZN D 502 1555 1555 2.32 LINK NE2 HIS D 373 ZN ZN D 502 1555 1555 2.04 LINK SG CYS D 381 ZN ZN D 503 1555 1555 2.43 LINK SG CYS D 384 ZN ZN D 503 1555 1555 2.31 LINK NE2 HIS D 397 ZN ZN D 503 1555 1555 2.04 LINK NE2 HIS D 401 ZN ZN D 503 1555 1555 2.05 LINK SG CYS D 409 ZN ZN D 504 1555 1555 2.31 LINK SG CYS D 412 ZN ZN D 504 1555 1555 2.27 LINK NE2 HIS D 425 ZN ZN D 504 1555 1555 2.05 LINK NE2 HIS D 430 ZN ZN D 504 1555 1555 2.01 LINK SG CYS D 439 ZN ZN D 505 1555 1555 2.31 LINK SG CYS D 442 ZN ZN D 505 1555 1555 2.20 LINK NE2 HIS D 455 ZN ZN D 505 1555 1555 1.97 LINK NE2 HIS D 460 ZN ZN D 505 1555 1555 2.04 SITE 1 AC1 4 CYS A 324 CYS A 327 HIS A 340 HIS A 345 SITE 1 AC2 4 CYS A 353 CYS A 356 HIS A 369 HIS A 373 SITE 1 AC3 4 CYS A 381 CYS A 384 HIS A 397 HIS A 401 SITE 1 AC4 4 CYS A 409 CYS A 412 HIS A 425 HIS A 430 SITE 1 AC5 4 CYS A 439 CYS A 442 HIS A 455 HIS A 460 SITE 1 AC6 4 CYS D 324 CYS D 327 HIS D 340 HIS D 345 SITE 1 AC7 4 CYS D 353 CYS D 356 HIS D 369 HIS D 373 SITE 1 AC8 4 CYS D 381 CYS D 384 HIS D 397 HIS D 401 SITE 1 AC9 4 CYS D 409 CYS D 412 HIS D 425 HIS D 430 SITE 1 AD1 4 CYS D 439 CYS D 442 HIS D 455 HIS D 460 CRYST1 40.990 44.910 86.800 98.33 92.40 94.80 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024396 0.002049 0.001343 0.00000 SCALE2 0.000000 0.022345 0.003368 0.00000 SCALE3 0.000000 0.000000 0.011661 0.00000