HEADER HYDROLASE 15-AUG-16 5T07 TITLE CRYSTAL STRUCTURE OF A PUTATIVE ACYL-COA THIOESTERASE EC709/ECK0725 TITLE 2 FROM ESCHERICHIA COLI IN COMPLEX WITH DECANOYL-COA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACYL-COA THIOESTER HYDROLASE YBGC; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: ACYL-COA THIOESTERASE; COMPND 5 EC: 3.1.2.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI O157:H7; SOURCE 3 ORGANISM_TAXID: 83334; SOURCE 4 GENE: YBGC, Z0904, ECS0771; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG68SBPTEV KEYWDS ALPHA/BETA FOLD, HOTDOG FOLD, ACYL-COA, THIOESTERAE, HYDROLASE, KEYWDS 2 STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 3 DISEASES, CSGID EXPDTA X-RAY DIFFRACTION AUTHOR N.WATANABE,P.J.STOGIOS,T.SKARINA,R.DI LEO,A.SAVCHENKO,W.F.ANDERSON, AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 3 04-OCT-23 5T07 1 KEYWDS REVDAT 2 28-DEC-16 5T07 1 JRNL REVDAT 1 07-SEP-16 5T07 0 JRNL AUTH N.WATANABE,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS JRNL AUTH 2 DISEASES (CSGID) JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE ACYL-COA THIOESTERASE JRNL TITL 2 EC709/ECK0725 FROM ESCHERICHIA COLI IN COMPLEX WITH JRNL TITL 3 DECANOYL-COA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.02 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 65481 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.160 REMARK 3 FREE R VALUE TEST SET COUNT : 3376 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.0210 - 4.9437 0.99 2755 168 0.1941 0.1897 REMARK 3 2 4.9437 - 3.9271 1.00 2669 145 0.1334 0.1577 REMARK 3 3 3.9271 - 3.4315 1.00 2676 115 0.1441 0.1870 REMARK 3 4 3.4315 - 3.1182 1.00 2615 154 0.1639 0.1863 REMARK 3 5 3.1182 - 2.8949 1.00 2613 146 0.1770 0.2173 REMARK 3 6 2.8949 - 2.7244 1.00 2575 156 0.1822 0.2293 REMARK 3 7 2.7244 - 2.5880 1.00 2595 140 0.1770 0.2301 REMARK 3 8 2.5880 - 2.4754 1.00 2595 131 0.1858 0.2309 REMARK 3 9 2.4754 - 2.3802 1.00 2589 138 0.1812 0.2301 REMARK 3 10 2.3802 - 2.2981 1.00 2596 133 0.1767 0.2157 REMARK 3 11 2.2981 - 2.2262 1.00 2592 137 0.1670 0.1826 REMARK 3 12 2.2262 - 2.1626 1.00 2579 132 0.1726 0.2295 REMARK 3 13 2.1626 - 2.1057 1.00 2600 138 0.1735 0.2066 REMARK 3 14 2.1057 - 2.0544 1.00 2548 144 0.1710 0.2016 REMARK 3 15 2.0544 - 2.0077 1.00 2564 149 0.1765 0.2051 REMARK 3 16 2.0077 - 1.9649 1.00 2575 146 0.1841 0.2247 REMARK 3 17 1.9649 - 1.9256 1.00 2578 130 0.1833 0.2241 REMARK 3 18 1.9256 - 1.8893 1.00 2535 161 0.1880 0.2088 REMARK 3 19 1.8893 - 1.8556 1.00 2560 154 0.1971 0.2533 REMARK 3 20 1.8556 - 1.8241 1.00 2531 134 0.2015 0.2591 REMARK 3 21 1.8241 - 1.7947 1.00 2584 150 0.2082 0.2595 REMARK 3 22 1.7947 - 1.7671 1.00 2545 112 0.2120 0.2640 REMARK 3 23 1.7671 - 1.7411 1.00 2584 133 0.2306 0.2926 REMARK 3 24 1.7411 - 1.7166 0.95 2452 130 0.2555 0.2977 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.080 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4499 REMARK 3 ANGLE : 0.960 6115 REMARK 3 CHIRALITY : 0.060 697 REMARK 3 PLANARITY : 0.005 752 REMARK 3 DIHEDRAL : 22.634 1822 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 4.0673 -22.1641 20.8432 REMARK 3 T TENSOR REMARK 3 T11: 0.1775 T22: 0.1819 REMARK 3 T33: 0.1632 T12: 0.0118 REMARK 3 T13: -0.0047 T23: 0.0085 REMARK 3 L TENSOR REMARK 3 L11: 0.9272 L22: 1.0695 REMARK 3 L33: 0.6357 L12: 0.0725 REMARK 3 L13: -0.2228 L23: 0.1734 REMARK 3 S TENSOR REMARK 3 S11: 0.0085 S12: -0.0884 S13: 0.0139 REMARK 3 S21: 0.0663 S22: -0.0071 S23: -0.1084 REMARK 3 S31: -0.0111 S32: 0.0643 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5T07 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1000223396. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65557 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.717 REMARK 200 RESOLUTION RANGE LOW (A) : 29.017 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.67800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1S5U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2M AMMONIUM CITRATE, REMARK 280 10MM DECANOILCOA, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.96150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.84800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.56000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.84800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.96150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.56000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 1 REMARK 465 ASN A 2 REMARK 465 GLN A 134 REMARK 465 VAL B 1 REMARK 465 ASN B 2 REMARK 465 THR B 3 REMARK 465 GLN B 134 REMARK 465 VAL C 1 REMARK 465 ASN C 2 REMARK 465 THR C 3 REMARK 465 LYS C 133 REMARK 465 GLN C 134 REMARK 465 VAL D 1 REMARK 465 ASN D 2 REMARK 465 LYS D 133 REMARK 465 GLN D 134 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 332 O HOH A 400 2.13 REMARK 500 O HOH B 240 O HOH C 383 2.14 REMARK 500 O HOH A 431 O HOH B 265 2.17 REMARK 500 O HOH A 401 O HOH A 402 2.18 REMARK 500 O HOH B 322 O HOH B 328 2.18 REMARK 500 OBA MFK C 201 O HOH C 301 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 117 CB - CG - CD2 ANGL. DEV. = -12.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 44 33.70 82.62 REMARK 500 ASP B 73 -5.60 80.16 REMARK 500 LEU B 117 -74.22 -74.61 REMARK 500 HIS C 44 37.83 81.54 REMARK 500 ASP C 73 -2.45 76.98 REMARK 500 ARG C 86 -139.61 -140.19 REMARK 500 ASP D 73 -4.47 77.10 REMARK 500 ASN D 98 -168.55 -103.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 457 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH A 458 DISTANCE = 6.41 ANGSTROMS REMARK 525 HOH A 459 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH A 460 DISTANCE = 7.62 ANGSTROMS REMARK 525 HOH B 328 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH B 329 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH B 330 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH B 331 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH C 431 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH C 432 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH C 433 DISTANCE = 6.70 ANGSTROMS REMARK 525 HOH D 406 DISTANCE = 6.01 ANGSTROMS REMARK 525 HOH D 407 DISTANCE = 6.17 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MFK A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MFK C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MFK D 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1S5U RELATED DB: PDB REMARK 900 APOENZYME REMARK 900 RELATED ID: 5KL9 RELATED DB: PDB REMARK 900 COA BOUND REMARK 900 RELATED ID: 5T06 RELATED DB: PDB REMARK 900 RELATED ID: CSGID-IDP95663 RELATED DB: TARGETTRACK DBREF 5T07 A 2 134 UNP P0A8Z5 YBGC_ECO57 2 134 DBREF 5T07 B 2 134 UNP P0A8Z5 YBGC_ECO57 2 134 DBREF 5T07 C 2 134 UNP P0A8Z5 YBGC_ECO57 2 134 DBREF 5T07 D 2 134 UNP P0A8Z5 YBGC_ECO57 2 134 SEQADV 5T07 VAL A 1 UNP P0A8Z5 EXPRESSION TAG SEQADV 5T07 ALA A 18 UNP P0A8Z5 ASP 18 ENGINEERED MUTATION SEQADV 5T07 VAL B 1 UNP P0A8Z5 EXPRESSION TAG SEQADV 5T07 ALA B 18 UNP P0A8Z5 ASP 18 ENGINEERED MUTATION SEQADV 5T07 VAL C 1 UNP P0A8Z5 EXPRESSION TAG SEQADV 5T07 ALA C 18 UNP P0A8Z5 ASP 18 ENGINEERED MUTATION SEQADV 5T07 VAL D 1 UNP P0A8Z5 EXPRESSION TAG SEQADV 5T07 ALA D 18 UNP P0A8Z5 ASP 18 ENGINEERED MUTATION SEQRES 1 A 134 VAL ASN THR THR LEU PHE ARG TRP PRO VAL ARG VAL TYR SEQRES 2 A 134 TYR GLU ASP THR ALA ALA GLY GLY VAL VAL TYR HIS ALA SEQRES 3 A 134 SER TYR VAL ALA PHE TYR GLU ARG ALA ARG THR GLU MET SEQRES 4 A 134 LEU ARG HIS HIS HIS PHE SER GLN GLN ALA LEU MET ALA SEQRES 5 A 134 GLU ARG VAL ALA PHE VAL VAL ARG LYS MET THR VAL GLU SEQRES 6 A 134 TYR TYR ALA PRO ALA ARG LEU ASP ASP MET LEU GLU ILE SEQRES 7 A 134 GLN THR GLU ILE THR SER MET ARG GLY THR SER LEU VAL SEQRES 8 A 134 PHE THR GLN ARG ILE VAL ASN ALA GLU ASN THR LEU LEU SEQRES 9 A 134 ASN GLU ALA GLU VAL LEU VAL VAL CYS VAL ASP PRO LEU SEQRES 10 A 134 LYS MET LYS PRO ARG ALA LEU PRO LYS SER ILE VAL ALA SEQRES 11 A 134 GLU PHE LYS GLN SEQRES 1 B 134 VAL ASN THR THR LEU PHE ARG TRP PRO VAL ARG VAL TYR SEQRES 2 B 134 TYR GLU ASP THR ALA ALA GLY GLY VAL VAL TYR HIS ALA SEQRES 3 B 134 SER TYR VAL ALA PHE TYR GLU ARG ALA ARG THR GLU MET SEQRES 4 B 134 LEU ARG HIS HIS HIS PHE SER GLN GLN ALA LEU MET ALA SEQRES 5 B 134 GLU ARG VAL ALA PHE VAL VAL ARG LYS MET THR VAL GLU SEQRES 6 B 134 TYR TYR ALA PRO ALA ARG LEU ASP ASP MET LEU GLU ILE SEQRES 7 B 134 GLN THR GLU ILE THR SER MET ARG GLY THR SER LEU VAL SEQRES 8 B 134 PHE THR GLN ARG ILE VAL ASN ALA GLU ASN THR LEU LEU SEQRES 9 B 134 ASN GLU ALA GLU VAL LEU VAL VAL CYS VAL ASP PRO LEU SEQRES 10 B 134 LYS MET LYS PRO ARG ALA LEU PRO LYS SER ILE VAL ALA SEQRES 11 B 134 GLU PHE LYS GLN SEQRES 1 C 134 VAL ASN THR THR LEU PHE ARG TRP PRO VAL ARG VAL TYR SEQRES 2 C 134 TYR GLU ASP THR ALA ALA GLY GLY VAL VAL TYR HIS ALA SEQRES 3 C 134 SER TYR VAL ALA PHE TYR GLU ARG ALA ARG THR GLU MET SEQRES 4 C 134 LEU ARG HIS HIS HIS PHE SER GLN GLN ALA LEU MET ALA SEQRES 5 C 134 GLU ARG VAL ALA PHE VAL VAL ARG LYS MET THR VAL GLU SEQRES 6 C 134 TYR TYR ALA PRO ALA ARG LEU ASP ASP MET LEU GLU ILE SEQRES 7 C 134 GLN THR GLU ILE THR SER MET ARG GLY THR SER LEU VAL SEQRES 8 C 134 PHE THR GLN ARG ILE VAL ASN ALA GLU ASN THR LEU LEU SEQRES 9 C 134 ASN GLU ALA GLU VAL LEU VAL VAL CYS VAL ASP PRO LEU SEQRES 10 C 134 LYS MET LYS PRO ARG ALA LEU PRO LYS SER ILE VAL ALA SEQRES 11 C 134 GLU PHE LYS GLN SEQRES 1 D 134 VAL ASN THR THR LEU PHE ARG TRP PRO VAL ARG VAL TYR SEQRES 2 D 134 TYR GLU ASP THR ALA ALA GLY GLY VAL VAL TYR HIS ALA SEQRES 3 D 134 SER TYR VAL ALA PHE TYR GLU ARG ALA ARG THR GLU MET SEQRES 4 D 134 LEU ARG HIS HIS HIS PHE SER GLN GLN ALA LEU MET ALA SEQRES 5 D 134 GLU ARG VAL ALA PHE VAL VAL ARG LYS MET THR VAL GLU SEQRES 6 D 134 TYR TYR ALA PRO ALA ARG LEU ASP ASP MET LEU GLU ILE SEQRES 7 D 134 GLN THR GLU ILE THR SER MET ARG GLY THR SER LEU VAL SEQRES 8 D 134 PHE THR GLN ARG ILE VAL ASN ALA GLU ASN THR LEU LEU SEQRES 9 D 134 ASN GLU ALA GLU VAL LEU VAL VAL CYS VAL ASP PRO LEU SEQRES 10 D 134 LYS MET LYS PRO ARG ALA LEU PRO LYS SER ILE VAL ALA SEQRES 11 D 134 GLU PHE LYS GLN HET MFK A 201 59 HET MFK C 201 59 HET MFK D 201 59 HETNAM MFK DECANOYL-COA FORMUL 5 MFK 3(C31 H54 N7 O17 P3 S) FORMUL 8 HOH *531(H2 O) HELIX 1 AA1 TYR A 13 THR A 17 5 5 HELIX 2 AA2 TYR A 24 HIS A 43 1 20 HELIX 3 AA3 SER A 46 GLU A 53 1 8 HELIX 4 AA4 PRO A 125 PHE A 132 1 8 HELIX 5 AA5 TYR B 13 GLU B 15 5 3 HELIX 6 AA6 TYR B 24 HIS B 43 1 20 HELIX 7 AA7 SER B 46 GLU B 53 1 8 HELIX 8 AA8 PRO B 125 LYS B 133 1 9 HELIX 9 AA9 TYR C 13 THR C 17 5 5 HELIX 10 AB1 TYR C 24 HIS C 43 1 20 HELIX 11 AB2 SER C 46 ALA C 52 1 7 HELIX 12 AB3 PRO C 125 PHE C 132 1 8 HELIX 13 AB4 TYR D 13 GLU D 15 5 3 HELIX 14 AB5 TYR D 24 HIS D 43 1 20 HELIX 15 AB6 SER D 46 GLU D 53 1 8 HELIX 16 AB7 PRO D 125 PHE D 132 1 8 SHEET 1 AA1 5 PHE A 6 ARG A 11 0 SHEET 2 AA1 5 MET A 75 ARG A 86 -1 O ILE A 78 N TRP A 8 SHEET 3 AA1 5 SER A 89 VAL A 97 -1 O SER A 89 N ARG A 86 SHEET 4 AA1 5 LEU A 103 ASP A 115 -1 O ALA A 107 N GLN A 94 SHEET 5 AA1 5 LYS A 120 PRO A 121 -1 O LYS A 120 N ASP A 115 SHEET 1 AA210 PHE A 6 ARG A 11 0 SHEET 2 AA210 MET A 75 ARG A 86 -1 O ILE A 78 N TRP A 8 SHEET 3 AA210 SER A 89 VAL A 97 -1 O SER A 89 N ARG A 86 SHEET 4 AA210 LEU A 103 ASP A 115 -1 O ALA A 107 N GLN A 94 SHEET 5 AA210 ALA A 56 TYR A 66 -1 N ARG A 60 O LEU A 110 SHEET 6 AA210 ALA D 56 TYR D 66 -1 O VAL D 64 N MET A 62 SHEET 7 AA210 LEU D 103 VAL D 114 -1 O LEU D 110 N LYS D 61 SHEET 8 AA210 SER D 89 VAL D 97 -1 N LEU D 90 O VAL D 111 SHEET 9 AA210 MET D 75 ARG D 86 -1 N GLN D 79 O ARG D 95 SHEET 10 AA210 PHE D 6 ARG D 11 -1 N TRP D 8 O ILE D 78 SHEET 1 AA310 PHE B 6 ARG B 11 0 SHEET 2 AA310 MET B 75 ARG B 86 -1 O LEU B 76 N VAL B 10 SHEET 3 AA310 SER B 89 VAL B 97 -1 O ARG B 95 N GLN B 79 SHEET 4 AA310 LEU B 103 ASP B 115 -1 O VAL B 111 N LEU B 90 SHEET 5 AA310 ALA B 56 TYR B 66 -1 N ALA B 56 O VAL B 114 SHEET 6 AA310 ALA C 56 TYR C 66 -1 O MET C 62 N VAL B 64 SHEET 7 AA310 LEU C 103 ASP C 115 -1 O LEU C 110 N ARG C 60 SHEET 8 AA310 SER C 89 VAL C 97 -1 N LEU C 90 O VAL C 111 SHEET 9 AA310 MET C 75 MET C 85 -1 N GLN C 79 O ARG C 95 SHEET 10 AA310 PHE C 6 ARG C 11 -1 N VAL C 10 O LEU C 76 SHEET 1 AA4 6 LYS B 120 PRO B 121 0 SHEET 2 AA4 6 LEU B 103 ASP B 115 -1 N ASP B 115 O LYS B 120 SHEET 3 AA4 6 ALA B 56 TYR B 66 -1 N ALA B 56 O VAL B 114 SHEET 4 AA4 6 ALA C 56 TYR C 66 -1 O MET C 62 N VAL B 64 SHEET 5 AA4 6 LEU C 103 ASP C 115 -1 O LEU C 110 N ARG C 60 SHEET 6 AA4 6 LYS C 120 PRO C 121 -1 O LYS C 120 N ASP C 115 SHEET 1 AA5 2 THR B 17 ALA B 18 0 SHEET 2 AA5 2 VAL B 22 VAL B 23 -1 O VAL B 22 N ALA B 18 SHEET 1 AA6 2 THR D 17 ALA D 18 0 SHEET 2 AA6 2 VAL D 22 VAL D 23 -1 O VAL D 22 N ALA D 18 SITE 1 AC1 25 ALA A 19 GLY A 20 VAL A 23 TYR A 24 SITE 2 AC1 25 HIS A 25 TYR A 66 TYR A 67 ALA A 68 SITE 3 AC1 25 PRO A 69 HOH A 314 HOH A 315 HOH A 335 SITE 4 AC1 25 HOH A 379 HOH A 392 TYR C 14 GLU C 53 SITE 5 AC1 25 SER C 127 HOH C 430 ALA D 56 PHE D 57 SITE 6 AC1 25 VAL D 59 ARG D 60 PRO D 116 MET D 119 SITE 7 AC1 25 PRO D 121 SITE 1 AC2 30 ALA B 19 GLY B 20 VAL B 23 TYR B 24 SITE 2 AC2 30 HIS B 25 TYR B 66 TYR B 67 ALA B 68 SITE 3 AC2 30 PRO B 69 HOH B 207 HOH B 209 MET C 51 SITE 4 AC2 30 ALA C 56 VAL C 58 VAL C 59 ARG C 60 SITE 5 AC2 30 ARG C 86 GLY C 87 THR C 88 SER C 89 SITE 6 AC2 30 LEU C 110 PRO C 116 MET C 119 HOH C 301 SITE 7 AC2 30 HOH C 303 HOH C 308 HOH C 310 HOH C 313 SITE 8 AC2 30 HOH C 323 TYR D 14 SITE 1 AC3 29 MET A 51 PHE A 57 VAL A 58 VAL A 59 SITE 2 AC3 29 ARG A 60 MET A 119 PRO A 121 TYR B 14 SITE 3 AC3 29 ALA B 52 GLU B 53 SER B 127 HOH B 273 SITE 4 AC3 29 ALA D 19 VAL D 23 TYR D 24 HIS D 25 SITE 5 AC3 29 TYR D 66 TYR D 67 ALA D 68 PRO D 69 SITE 6 AC3 29 THR D 102 HOH D 301 HOH D 307 HOH D 325 SITE 7 AC3 29 HOH D 335 HOH D 350 HOH D 354 HOH D 357 SITE 8 AC3 29 HOH D 367 CRYST1 63.923 97.120 97.696 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015644 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010297 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010236 0.00000