HEADER HYDROLASE/RNA 18-AUG-16 5T16 TITLE CRYSTAL STRUCTURE OF YEAST RNASE III (RNT1P) COMPLEXED WITH A NON- TITLE 2 HYDROLYZABLE RNA SUBSTRATE ANALOG COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBONUCLEASE 3; COMPND 3 CHAIN: A, B, I, J; COMPND 4 FRAGMENT: UNP RESIDUES 184-499; COMPND 5 SYNONYM: RIBONUCLEASE III,RNASE III; COMPND 6 EC: 3.1.26.3; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: RIBONUCLEASE 3; COMPND 10 CHAIN: C, D, E, F, K, L, M, N; COMPND 11 FRAGMENT: UNP RESIDUES 41-199; COMPND 12 SYNONYM: RIBONUCLEASE III,RNASE III; COMPND 13 EC: 3.1.26.3; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: RNA SUBSTRATE ANALOG; COMPND 17 CHAIN: G, H, O, P; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C); SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292; SOURCE 6 STRAIN: ATCC 204508 / S288C; SOURCE 7 GENE: RNT1, YMR239C, YM9408.01C, YM9959.21; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 12 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 13 ORGANISM_TAXID: 559292; SOURCE 14 STRAIN: ATCC 204508 / S288C; SOURCE 15 GENE: RNT1, YMR239C, YM9408.01C, YM9959.21; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 MOL_ID: 3; SOURCE 19 SYNTHETIC: YES KEYWDS RNT1P, RNASE III, SUBSTRATE-LOADED COMPLEX, HYDROLASE-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.SONG,X.JI REVDAT 4 04-OCT-23 5T16 1 REMARK REVDAT 3 30-AUG-23 5T16 1 AUTHOR JRNL REVDAT 2 15-FEB-17 5T16 1 JRNL REVDAT 1 08-FEB-17 5T16 0 JRNL AUTH H.SONG,X.FANG,L.JIN,G.X.SHAW,Y.X.WANG,X.JI JRNL TITL THE FUNCTIONAL CYCLE OF RNT1P: FIVE CONSECUTIVE STEPS OF JRNL TITL 2 DOUBLE-STRANDED RNA PROCESSING BY A EUKARYOTIC RNASE III. JRNL REF STRUCTURE V. 25 353 2017 JRNL REFN ISSN 1878-4186 JRNL PMID 28111020 JRNL DOI 10.1016/J.STR.2016.12.013 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Y.H.LIANG,M.LAVOIE,M.A.COMEAU,S.ABOU ELELA,X.JI REMARK 1 TITL STRUCTURE OF A EUKARYOTIC RNASE III POSTCLEAVAGE COMPLEX REMARK 1 TITL 2 REVEALS A DOUBLE-RULER MECHANISM FOR SUBSTRATE SELECTION. REMARK 1 REF MOL. CELL V. 54 431 2014 REMARK 1 REFN ISSN 1097-4164 REMARK 1 PMID 24703949 REMARK 1 DOI 10.1016/J.MOLCEL.2014.03.006 REMARK 2 REMARK 2 RESOLUTION. 2.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2376: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 86174 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.150 REMARK 3 FREE R VALUE TEST SET COUNT : 995 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.9891 - 5.3195 0.99 12442 147 0.1784 0.1843 REMARK 3 2 5.3195 - 4.2239 1.00 12415 147 0.1870 0.2535 REMARK 3 3 4.2239 - 3.6904 1.00 12412 138 0.2019 0.2462 REMARK 3 4 3.6904 - 3.3532 1.00 12354 148 0.2480 0.3071 REMARK 3 5 3.3532 - 3.1130 1.00 12311 137 0.2879 0.3177 REMARK 3 6 3.1130 - 2.9295 0.99 12201 152 0.3440 0.3972 REMARK 3 7 2.9295 - 2.7828 0.89 11044 126 0.3792 0.4464 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5T16 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1000223452. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 86174 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.780 REMARK 200 RESOLUTION RANGE LOW (A) : 38.990 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.7900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4OOG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2 M DI AMMONIUM REMARK 280 CITRATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 82.03250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 29690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 58550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -217.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 30490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 58710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -206.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, J, K, L, M, N, O, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN B 357 REMARK 465 VAL B 358 REMARK 465 ALA B 359 REMARK 465 LEU B 360 REMARK 465 GLU B 361 REMARK 465 PRO B 458 REMARK 465 SER B 459 REMARK 465 ILE C 41 REMARK 465 ARG C 155 REMARK 465 GLU C 156 REMARK 465 LYS C 157 REMARK 465 ARG C 158 REMARK 465 GLU C 159 REMARK 465 ILE D 41 REMARK 465 SER D 42 REMARK 465 GLU D 159 REMARK 465 ILE E 41 REMARK 465 SER E 42 REMARK 465 ARG E 158 REMARK 465 GLU E 159 REMARK 465 ILE F 41 REMARK 465 SER F 42 REMARK 465 ARG F 158 REMARK 465 GLU F 159 REMARK 465 TYR J 184 REMARK 465 ALA J 359 REMARK 465 LEU J 360 REMARK 465 GLU J 361 REMARK 465 LYS J 362 REMARK 465 THR J 363 REMARK 465 ASP J 364 REMARK 465 PRO J 458 REMARK 465 SER J 459 REMARK 465 ILE K 41 REMARK 465 GLU K 156 REMARK 465 LYS K 157 REMARK 465 ARG K 158 REMARK 465 GLU K 159 REMARK 465 ILE L 41 REMARK 465 SER L 42 REMARK 465 GLU L 159 REMARK 465 VAL M 153 REMARK 465 LYS M 154 REMARK 465 ARG M 155 REMARK 465 GLU M 156 REMARK 465 LYS M 157 REMARK 465 ARG M 158 REMARK 465 GLU M 159 REMARK 465 ILE N 41 REMARK 465 SER N 42 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OP2 C G 2 O HOH G 101 2.09 REMARK 500 N4 73W P 3 O HOH P 101 2.13 REMARK 500 OP2 G G 18 O HOH G 102 2.15 REMARK 500 OG SER D 93 O HOH D 201 2.17 REMARK 500 OE2 GLU C 119 O HOH C 201 2.17 REMARK 500 OP2 A G 14 O HOH G 103 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET F 144 CB - CA - C ANGL. DEV. = -31.2 DEGREES REMARK 500 GLU F 145 N - CA - CB ANGL. DEV. = -23.0 DEGREES REMARK 500 A G 4 O3' - P - OP2 ANGL. DEV. = 26.0 DEGREES REMARK 500 A G 4 O3' - P - OP1 ANGL. DEV. = -17.8 DEGREES REMARK 500 73W H 3 C3' - O3' - P ANGL. DEV. = 8.2 DEGREES REMARK 500 U H 19 N3 - C2 - O2 ANGL. DEV. = -4.8 DEGREES REMARK 500 U H 19 N3 - C4 - O4 ANGL. DEV. = -5.0 DEGREES REMARK 500 U H 19 C5 - C4 - O4 ANGL. DEV. = 4.9 DEGREES REMARK 500 LYS N 154 CB - CG - CD ANGL. DEV. = 16.2 DEGREES REMARK 500 73W O 3 C3' - O3' - P ANGL. DEV. = 7.8 DEGREES REMARK 500 A O 4 O3' - P - OP2 ANGL. DEV. = 11.7 DEGREES REMARK 500 C P 2 C3' - O3' - P ANGL. DEV. = 19.1 DEGREES REMARK 500 A P 4 O3' - P - O5' ANGL. DEV. = 15.2 DEGREES REMARK 500 U P 19 N3 - C2 - O2 ANGL. DEV. = -4.9 DEGREES REMARK 500 U P 19 N3 - C4 - O4 ANGL. DEV. = -5.3 DEGREES REMARK 500 U P 19 C5 - C4 - O4 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 185 74.36 43.09 REMARK 500 THR A 187 -15.15 -47.84 REMARK 500 SER A 451 126.33 -35.13 REMARK 500 PRO A 458 63.09 -63.34 REMARK 500 ALA B 189 -82.25 -100.51 REMARK 500 ALA B 235 -62.47 -94.88 REMARK 500 ALA D 115 -115.62 52.82 REMARK 500 ASN E 82 -79.75 -117.60 REMARK 500 GLN E 83 -3.04 76.04 REMARK 500 ALA E 115 -115.00 47.36 REMARK 500 LYS E 141 4.68 -65.88 REMARK 500 ALA F 115 -111.76 53.08 REMARK 500 PRO I 186 -174.67 -67.63 REMARK 500 PRO I 398 47.03 -80.68 REMARK 500 PRO I 458 66.78 -63.49 REMARK 500 PRO J 186 129.44 -35.42 REMARK 500 ALA J 235 -60.54 -98.57 REMARK 500 LYS K 112 76.76 -119.49 REMARK 500 ALA L 115 -113.77 55.33 REMARK 500 ASN M 43 -116.70 57.05 REMARK 500 ARG N 155 -56.40 -140.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG A 450 SER A 451 -115.68 REMARK 500 SER A 451 GLU A 452 35.37 REMARK 500 ASP C 114 ALA C 115 -130.93 REMARK 500 ASP K 114 ALA K 115 -122.34 REMARK 500 ASP M 114 ALA M 115 -131.83 REMARK 500 ASP N 114 ALA N 115 -126.40 REMARK 500 VAL N 153 LYS N 154 147.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH F 309 DISTANCE = 5.88 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO E 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO F 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO H 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO I 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO I 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO I 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO I 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO I 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO J 501 DBREF 5T16 A 184 459 UNP Q02555 RNT1_YEAST 184 459 DBREF 5T16 B 184 459 UNP Q02555 RNT1_YEAST 184 459 DBREF 5T16 C 41 159 UNP Q02555 RNT1_YEAST 41 159 DBREF 5T16 D 41 159 UNP Q02555 RNT1_YEAST 41 159 DBREF 5T16 E 41 159 UNP Q02555 RNT1_YEAST 41 159 DBREF 5T16 F 41 159 UNP Q02555 RNT1_YEAST 41 159 DBREF 5T16 G 1 34 PDB 5T16 5T16 1 34 DBREF 5T16 H 1 34 PDB 5T16 5T16 1 34 DBREF 5T16 I 184 459 UNP Q02555 RNT1_YEAST 184 459 DBREF 5T16 J 184 459 UNP Q02555 RNT1_YEAST 184 459 DBREF 5T16 K 41 159 UNP Q02555 RNT1_YEAST 41 159 DBREF 5T16 L 41 159 UNP Q02555 RNT1_YEAST 41 159 DBREF 5T16 M 41 159 UNP Q02555 RNT1_YEAST 41 159 DBREF 5T16 N 41 159 UNP Q02555 RNT1_YEAST 41 159 DBREF 5T16 O 1 34 PDB 5T16 5T16 1 34 DBREF 5T16 P 1 34 PDB 5T16 5T16 1 34 SEQRES 1 A 276 TYR ASP PRO THR LYS ALA GLY ASP ILE VAL LYS ALA THR SEQRES 2 A 276 LYS TRP PRO PRO LYS LEU PRO GLU ILE GLN ASP LEU ALA SEQRES 3 A 276 ILE ARG ALA ARG VAL PHE ILE HIS LYS SER THR ILE LYS SEQRES 4 A 276 ASP LYS VAL TYR LEU SER GLY SER GLU MET ILE ASN ALA SEQRES 5 A 276 HIS ASN GLU ARG LEU GLU PHE LEU GLY ASP SER ILE LEU SEQRES 6 A 276 ASN SER VAL MET THR LEU ILE ILE TYR ASN LYS PHE PRO SEQRES 7 A 276 ASP TYR SER GLU GLY GLN LEU SER THR LEU ARG MET ASN SEQRES 8 A 276 LEU VAL SER ASN GLU GLN ILE LYS GLN TRP SER ILE MET SEQRES 9 A 276 TYR ASN PHE HIS GLU LYS LEU LYS THR ASN PHE ASP LEU SEQRES 10 A 276 LYS ASP GLU ASN SER ASN PHE GLN ASN GLY LYS LEU LYS SEQRES 11 A 276 LEU TYR ALA ASP VAL PHE GLU ALA TYR ILE GLY GLY LEU SEQRES 12 A 276 MET GLU ASP ASP PRO ARG ASN ASN LEU PRO LYS ILE ARG SEQRES 13 A 276 LYS TRP LEU ARG LYS LEU ALA LYS PRO VAL ILE GLU GLU SEQRES 14 A 276 ALA THR ARG ASN GLN VAL ALA LEU GLU LYS THR ASP LYS SEQRES 15 A 276 LEU ASP MET ASN ALA LYS ARG GLN LEU TYR SER LEU ILE SEQRES 16 A 276 GLY TYR ALA SER LEU ARG LEU HIS TYR VAL THR VAL LYS SEQRES 17 A 276 LYS PRO THR ALA VAL ASP PRO ASN SER ILE VAL GLU CYS SEQRES 18 A 276 ARG VAL GLY ASP GLY THR VAL LEU GLY THR GLY VAL GLY SEQRES 19 A 276 ARG ASN ILE LYS ILE ALA GLY ILE ARG ALA ALA GLU ASN SEQRES 20 A 276 ALA LEU ARG ASP LYS LYS MET LEU ASP PHE TYR ALA LYS SEQRES 21 A 276 GLN ARG ALA ALA ILE PRO ARG SER GLU SER VAL LEU LYS SEQRES 22 A 276 ASP PRO SER SEQRES 1 B 276 TYR ASP PRO THR LYS ALA GLY ASP ILE VAL LYS ALA THR SEQRES 2 B 276 LYS TRP PRO PRO LYS LEU PRO GLU ILE GLN ASP LEU ALA SEQRES 3 B 276 ILE ARG ALA ARG VAL PHE ILE HIS LYS SER THR ILE LYS SEQRES 4 B 276 ASP LYS VAL TYR LEU SER GLY SER GLU MET ILE ASN ALA SEQRES 5 B 276 HIS ASN GLU ARG LEU GLU PHE LEU GLY ASP SER ILE LEU SEQRES 6 B 276 ASN SER VAL MET THR LEU ILE ILE TYR ASN LYS PHE PRO SEQRES 7 B 276 ASP TYR SER GLU GLY GLN LEU SER THR LEU ARG MET ASN SEQRES 8 B 276 LEU VAL SER ASN GLU GLN ILE LYS GLN TRP SER ILE MET SEQRES 9 B 276 TYR ASN PHE HIS GLU LYS LEU LYS THR ASN PHE ASP LEU SEQRES 10 B 276 LYS ASP GLU ASN SER ASN PHE GLN ASN GLY LYS LEU LYS SEQRES 11 B 276 LEU TYR ALA ASP VAL PHE GLU ALA TYR ILE GLY GLY LEU SEQRES 12 B 276 MET GLU ASP ASP PRO ARG ASN ASN LEU PRO LYS ILE ARG SEQRES 13 B 276 LYS TRP LEU ARG LYS LEU ALA LYS PRO VAL ILE GLU GLU SEQRES 14 B 276 ALA THR ARG ASN GLN VAL ALA LEU GLU LYS THR ASP LYS SEQRES 15 B 276 LEU ASP MET ASN ALA LYS ARG GLN LEU TYR SER LEU ILE SEQRES 16 B 276 GLY TYR ALA SER LEU ARG LEU HIS TYR VAL THR VAL LYS SEQRES 17 B 276 LYS PRO THR ALA VAL ASP PRO ASN SER ILE VAL GLU CYS SEQRES 18 B 276 ARG VAL GLY ASP GLY THR VAL LEU GLY THR GLY VAL GLY SEQRES 19 B 276 ARG ASN ILE LYS ILE ALA GLY ILE ARG ALA ALA GLU ASN SEQRES 20 B 276 ALA LEU ARG ASP LYS LYS MET LEU ASP PHE TYR ALA LYS SEQRES 21 B 276 GLN ARG ALA ALA ILE PRO ARG SER GLU SER VAL LEU LYS SEQRES 22 B 276 ASP PRO SER SEQRES 1 C 119 ILE SER ASN TYR LYS TYR LEU GLU VAL ILE GLN LEU GLU SEQRES 2 C 119 HIS ALA VAL THR LYS LEU VAL GLU SER TYR ASN LYS ILE SEQRES 3 C 119 ILE GLU LEU SER PRO ASN LEU VAL ALA TYR ASN GLU ALA SEQRES 4 C 119 VAL ASN ASN GLN ASP ARG VAL PRO VAL GLN ILE LEU PRO SEQRES 5 C 119 SER LEU SER ARG TYR GLN LEU LYS LEU ALA ALA GLU LEU SEQRES 6 C 119 LYS THR LEU HIS ASP LEU LYS LYS ASP ALA ILE LEU THR SEQRES 7 C 119 GLU ILE THR ASP TYR GLU ASN GLU PHE ASP THR GLU GLN SEQRES 8 C 119 LYS GLN PRO ILE LEU GLN GLU ILE SER LYS ALA ASP MET SEQRES 9 C 119 GLU LYS LEU GLU LYS LEU GLU GLN VAL LYS ARG GLU LYS SEQRES 10 C 119 ARG GLU SEQRES 1 D 119 ILE SER ASN TYR LYS TYR LEU GLU VAL ILE GLN LEU GLU SEQRES 2 D 119 HIS ALA VAL THR LYS LEU VAL GLU SER TYR ASN LYS ILE SEQRES 3 D 119 ILE GLU LEU SER PRO ASN LEU VAL ALA TYR ASN GLU ALA SEQRES 4 D 119 VAL ASN ASN GLN ASP ARG VAL PRO VAL GLN ILE LEU PRO SEQRES 5 D 119 SER LEU SER ARG TYR GLN LEU LYS LEU ALA ALA GLU LEU SEQRES 6 D 119 LYS THR LEU HIS ASP LEU LYS LYS ASP ALA ILE LEU THR SEQRES 7 D 119 GLU ILE THR ASP TYR GLU ASN GLU PHE ASP THR GLU GLN SEQRES 8 D 119 LYS GLN PRO ILE LEU GLN GLU ILE SER LYS ALA ASP MET SEQRES 9 D 119 GLU LYS LEU GLU LYS LEU GLU GLN VAL LYS ARG GLU LYS SEQRES 10 D 119 ARG GLU SEQRES 1 E 119 ILE SER ASN TYR LYS TYR LEU GLU VAL ILE GLN LEU GLU SEQRES 2 E 119 HIS ALA VAL THR LYS LEU VAL GLU SER TYR ASN LYS ILE SEQRES 3 E 119 ILE GLU LEU SER PRO ASN LEU VAL ALA TYR ASN GLU ALA SEQRES 4 E 119 VAL ASN ASN GLN ASP ARG VAL PRO VAL GLN ILE LEU PRO SEQRES 5 E 119 SER LEU SER ARG TYR GLN LEU LYS LEU ALA ALA GLU LEU SEQRES 6 E 119 LYS THR LEU HIS ASP LEU LYS LYS ASP ALA ILE LEU THR SEQRES 7 E 119 GLU ILE THR ASP TYR GLU ASN GLU PHE ASP THR GLU GLN SEQRES 8 E 119 LYS GLN PRO ILE LEU GLN GLU ILE SER LYS ALA ASP MET SEQRES 9 E 119 GLU LYS LEU GLU LYS LEU GLU GLN VAL LYS ARG GLU LYS SEQRES 10 E 119 ARG GLU SEQRES 1 F 119 ILE SER ASN TYR LYS TYR LEU GLU VAL ILE GLN LEU GLU SEQRES 2 F 119 HIS ALA VAL THR LYS LEU VAL GLU SER TYR ASN LYS ILE SEQRES 3 F 119 ILE GLU LEU SER PRO ASN LEU VAL ALA TYR ASN GLU ALA SEQRES 4 F 119 VAL ASN ASN GLN ASP ARG VAL PRO VAL GLN ILE LEU PRO SEQRES 5 F 119 SER LEU SER ARG TYR GLN LEU LYS LEU ALA ALA GLU LEU SEQRES 6 F 119 LYS THR LEU HIS ASP LEU LYS LYS ASP ALA ILE LEU THR SEQRES 7 F 119 GLU ILE THR ASP TYR GLU ASN GLU PHE ASP THR GLU GLN SEQRES 8 F 119 LYS GLN PRO ILE LEU GLN GLU ILE SER LYS ALA ASP MET SEQRES 9 F 119 GLU LYS LEU GLU LYS LEU GLU GLN VAL LYS ARG GLU LYS SEQRES 10 F 119 ARG GLU SEQRES 1 G 34 G C 73W A U G U C A U G U C SEQRES 2 G 34 A U G A G U C C A U G G C SEQRES 3 G 34 A U G G C A U G SEQRES 1 H 34 G C 73W A U G U C A U G U C SEQRES 2 H 34 A U G A G U C C A U G G C SEQRES 3 H 34 A U G G C A U G SEQRES 1 I 276 TYR ASP PRO THR LYS ALA GLY ASP ILE VAL LYS ALA THR SEQRES 2 I 276 LYS TRP PRO PRO LYS LEU PRO GLU ILE GLN ASP LEU ALA SEQRES 3 I 276 ILE ARG ALA ARG VAL PHE ILE HIS LYS SER THR ILE LYS SEQRES 4 I 276 ASP LYS VAL TYR LEU SER GLY SER GLU MET ILE ASN ALA SEQRES 5 I 276 HIS ASN GLU ARG LEU GLU PHE LEU GLY ASP SER ILE LEU SEQRES 6 I 276 ASN SER VAL MET THR LEU ILE ILE TYR ASN LYS PHE PRO SEQRES 7 I 276 ASP TYR SER GLU GLY GLN LEU SER THR LEU ARG MET ASN SEQRES 8 I 276 LEU VAL SER ASN GLU GLN ILE LYS GLN TRP SER ILE MET SEQRES 9 I 276 TYR ASN PHE HIS GLU LYS LEU LYS THR ASN PHE ASP LEU SEQRES 10 I 276 LYS ASP GLU ASN SER ASN PHE GLN ASN GLY LYS LEU LYS SEQRES 11 I 276 LEU TYR ALA ASP VAL PHE GLU ALA TYR ILE GLY GLY LEU SEQRES 12 I 276 MET GLU ASP ASP PRO ARG ASN ASN LEU PRO LYS ILE ARG SEQRES 13 I 276 LYS TRP LEU ARG LYS LEU ALA LYS PRO VAL ILE GLU GLU SEQRES 14 I 276 ALA THR ARG ASN GLN VAL ALA LEU GLU LYS THR ASP LYS SEQRES 15 I 276 LEU ASP MET ASN ALA LYS ARG GLN LEU TYR SER LEU ILE SEQRES 16 I 276 GLY TYR ALA SER LEU ARG LEU HIS TYR VAL THR VAL LYS SEQRES 17 I 276 LYS PRO THR ALA VAL ASP PRO ASN SER ILE VAL GLU CYS SEQRES 18 I 276 ARG VAL GLY ASP GLY THR VAL LEU GLY THR GLY VAL GLY SEQRES 19 I 276 ARG ASN ILE LYS ILE ALA GLY ILE ARG ALA ALA GLU ASN SEQRES 20 I 276 ALA LEU ARG ASP LYS LYS MET LEU ASP PHE TYR ALA LYS SEQRES 21 I 276 GLN ARG ALA ALA ILE PRO ARG SER GLU SER VAL LEU LYS SEQRES 22 I 276 ASP PRO SER SEQRES 1 J 276 TYR ASP PRO THR LYS ALA GLY ASP ILE VAL LYS ALA THR SEQRES 2 J 276 LYS TRP PRO PRO LYS LEU PRO GLU ILE GLN ASP LEU ALA SEQRES 3 J 276 ILE ARG ALA ARG VAL PHE ILE HIS LYS SER THR ILE LYS SEQRES 4 J 276 ASP LYS VAL TYR LEU SER GLY SER GLU MET ILE ASN ALA SEQRES 5 J 276 HIS ASN GLU ARG LEU GLU PHE LEU GLY ASP SER ILE LEU SEQRES 6 J 276 ASN SER VAL MET THR LEU ILE ILE TYR ASN LYS PHE PRO SEQRES 7 J 276 ASP TYR SER GLU GLY GLN LEU SER THR LEU ARG MET ASN SEQRES 8 J 276 LEU VAL SER ASN GLU GLN ILE LYS GLN TRP SER ILE MET SEQRES 9 J 276 TYR ASN PHE HIS GLU LYS LEU LYS THR ASN PHE ASP LEU SEQRES 10 J 276 LYS ASP GLU ASN SER ASN PHE GLN ASN GLY LYS LEU LYS SEQRES 11 J 276 LEU TYR ALA ASP VAL PHE GLU ALA TYR ILE GLY GLY LEU SEQRES 12 J 276 MET GLU ASP ASP PRO ARG ASN ASN LEU PRO LYS ILE ARG SEQRES 13 J 276 LYS TRP LEU ARG LYS LEU ALA LYS PRO VAL ILE GLU GLU SEQRES 14 J 276 ALA THR ARG ASN GLN VAL ALA LEU GLU LYS THR ASP LYS SEQRES 15 J 276 LEU ASP MET ASN ALA LYS ARG GLN LEU TYR SER LEU ILE SEQRES 16 J 276 GLY TYR ALA SER LEU ARG LEU HIS TYR VAL THR VAL LYS SEQRES 17 J 276 LYS PRO THR ALA VAL ASP PRO ASN SER ILE VAL GLU CYS SEQRES 18 J 276 ARG VAL GLY ASP GLY THR VAL LEU GLY THR GLY VAL GLY SEQRES 19 J 276 ARG ASN ILE LYS ILE ALA GLY ILE ARG ALA ALA GLU ASN SEQRES 20 J 276 ALA LEU ARG ASP LYS LYS MET LEU ASP PHE TYR ALA LYS SEQRES 21 J 276 GLN ARG ALA ALA ILE PRO ARG SER GLU SER VAL LEU LYS SEQRES 22 J 276 ASP PRO SER SEQRES 1 K 119 ILE SER ASN TYR LYS TYR LEU GLU VAL ILE GLN LEU GLU SEQRES 2 K 119 HIS ALA VAL THR LYS LEU VAL GLU SER TYR ASN LYS ILE SEQRES 3 K 119 ILE GLU LEU SER PRO ASN LEU VAL ALA TYR ASN GLU ALA SEQRES 4 K 119 VAL ASN ASN GLN ASP ARG VAL PRO VAL GLN ILE LEU PRO SEQRES 5 K 119 SER LEU SER ARG TYR GLN LEU LYS LEU ALA ALA GLU LEU SEQRES 6 K 119 LYS THR LEU HIS ASP LEU LYS LYS ASP ALA ILE LEU THR SEQRES 7 K 119 GLU ILE THR ASP TYR GLU ASN GLU PHE ASP THR GLU GLN SEQRES 8 K 119 LYS GLN PRO ILE LEU GLN GLU ILE SER LYS ALA ASP MET SEQRES 9 K 119 GLU LYS LEU GLU LYS LEU GLU GLN VAL LYS ARG GLU LYS SEQRES 10 K 119 ARG GLU SEQRES 1 L 119 ILE SER ASN TYR LYS TYR LEU GLU VAL ILE GLN LEU GLU SEQRES 2 L 119 HIS ALA VAL THR LYS LEU VAL GLU SER TYR ASN LYS ILE SEQRES 3 L 119 ILE GLU LEU SER PRO ASN LEU VAL ALA TYR ASN GLU ALA SEQRES 4 L 119 VAL ASN ASN GLN ASP ARG VAL PRO VAL GLN ILE LEU PRO SEQRES 5 L 119 SER LEU SER ARG TYR GLN LEU LYS LEU ALA ALA GLU LEU SEQRES 6 L 119 LYS THR LEU HIS ASP LEU LYS LYS ASP ALA ILE LEU THR SEQRES 7 L 119 GLU ILE THR ASP TYR GLU ASN GLU PHE ASP THR GLU GLN SEQRES 8 L 119 LYS GLN PRO ILE LEU GLN GLU ILE SER LYS ALA ASP MET SEQRES 9 L 119 GLU LYS LEU GLU LYS LEU GLU GLN VAL LYS ARG GLU LYS SEQRES 10 L 119 ARG GLU SEQRES 1 M 119 ILE SER ASN TYR LYS TYR LEU GLU VAL ILE GLN LEU GLU SEQRES 2 M 119 HIS ALA VAL THR LYS LEU VAL GLU SER TYR ASN LYS ILE SEQRES 3 M 119 ILE GLU LEU SER PRO ASN LEU VAL ALA TYR ASN GLU ALA SEQRES 4 M 119 VAL ASN ASN GLN ASP ARG VAL PRO VAL GLN ILE LEU PRO SEQRES 5 M 119 SER LEU SER ARG TYR GLN LEU LYS LEU ALA ALA GLU LEU SEQRES 6 M 119 LYS THR LEU HIS ASP LEU LYS LYS ASP ALA ILE LEU THR SEQRES 7 M 119 GLU ILE THR ASP TYR GLU ASN GLU PHE ASP THR GLU GLN SEQRES 8 M 119 LYS GLN PRO ILE LEU GLN GLU ILE SER LYS ALA ASP MET SEQRES 9 M 119 GLU LYS LEU GLU LYS LEU GLU GLN VAL LYS ARG GLU LYS SEQRES 10 M 119 ARG GLU SEQRES 1 N 119 ILE SER ASN TYR LYS TYR LEU GLU VAL ILE GLN LEU GLU SEQRES 2 N 119 HIS ALA VAL THR LYS LEU VAL GLU SER TYR ASN LYS ILE SEQRES 3 N 119 ILE GLU LEU SER PRO ASN LEU VAL ALA TYR ASN GLU ALA SEQRES 4 N 119 VAL ASN ASN GLN ASP ARG VAL PRO VAL GLN ILE LEU PRO SEQRES 5 N 119 SER LEU SER ARG TYR GLN LEU LYS LEU ALA ALA GLU LEU SEQRES 6 N 119 LYS THR LEU HIS ASP LEU LYS LYS ASP ALA ILE LEU THR SEQRES 7 N 119 GLU ILE THR ASP TYR GLU ASN GLU PHE ASP THR GLU GLN SEQRES 8 N 119 LYS GLN PRO ILE LEU GLN GLU ILE SER LYS ALA ASP MET SEQRES 9 N 119 GLU LYS LEU GLU LYS LEU GLU GLN VAL LYS ARG GLU LYS SEQRES 10 N 119 ARG GLU SEQRES 1 O 34 G C 73W A U G U C A U G U C SEQRES 2 O 34 A U G A G U C C A U G G C SEQRES 3 O 34 A U G G C A U G SEQRES 1 P 34 G C 73W A U G U C A U G U C SEQRES 2 P 34 A U G A G U C C A U G G C SEQRES 3 P 34 A U G G C A U G HET 73W G 3 20 HET 73W H 3 20 HET 73W O 3 20 HET 73W P 3 20 HET EDO A 501 4 HET EDO E 201 4 HET EDO F 201 4 HET EDO H 101 4 HET EDO I 501 4 HET EDO I 502 4 HET EDO I 503 4 HET EDO I 504 4 HET EDO I 505 4 HET EDO J 501 4 HETNAM 73W 5'-O-[(DITHIOPHOSPHONO)]CYTIDINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 7 73W 4(C9 H14 N3 O6 P S2) FORMUL 17 EDO 10(C2 H6 O2) FORMUL 27 HOH *358(H2 O) HELIX 1 AA1 ASP A 207 VAL A 214 1 8 HELIX 2 AA2 PHE A 215 ILE A 216 5 2 HELIX 3 AA3 HIS A 217 ILE A 221 5 5 HELIX 4 AA4 SER A 228 ASN A 234 1 7 HELIX 5 AA5 ASN A 237 PHE A 260 1 24 HELIX 6 AA6 SER A 264 SER A 277 1 14 HELIX 7 AA7 SER A 277 TYR A 288 1 12 HELIX 8 AA8 ASN A 289 LEU A 294 1 6 HELIX 9 AA9 LEU A 312 ASP A 330 1 19 HELIX 10 AB1 ASP A 330 GLN A 357 1 28 HELIX 11 AB2 ASN A 369 GLY A 379 1 11 HELIX 12 AB3 TYR A 380 ARG A 384 5 5 HELIX 13 AB4 ASN A 419 ASP A 434 1 16 HELIX 14 AB5 ASP A 434 ILE A 448 1 15 HELIX 15 AB6 ASP B 207 VAL B 214 1 8 HELIX 16 AB7 PHE B 215 ILE B 216 5 2 HELIX 17 AB8 HIS B 217 ILE B 221 5 5 HELIX 18 AB9 SER B 228 ASN B 234 1 7 HELIX 19 AC1 ASN B 237 PHE B 260 1 24 HELIX 20 AC2 SER B 264 SER B 277 1 14 HELIX 21 AC3 SER B 277 TYR B 288 1 12 HELIX 22 AC4 ASN B 289 LEU B 294 1 6 HELIX 23 AC5 SER B 305 ASN B 309 5 5 HELIX 24 AC6 LEU B 312 ASP B 330 1 19 HELIX 25 AC7 ASP B 330 ASN B 356 1 27 HELIX 26 AC8 ASN B 369 GLY B 379 1 11 HELIX 27 AC9 TYR B 380 ARG B 384 5 5 HELIX 28 AD1 ASN B 419 ASP B 434 1 16 HELIX 29 AD2 ASP B 434 ALA B 447 1 14 HELIX 30 AD3 PRO B 449 VAL B 454 1 6 HELIX 31 AD4 LYS C 45 SER C 70 1 26 HELIX 32 AD5 ASN C 72 ASN C 82 1 11 HELIX 33 AD6 GLN C 83 VAL C 86 5 4 HELIX 34 AD7 PRO C 87 ARG C 96 5 10 HELIX 35 AD8 TYR C 97 LEU C 111 1 15 HELIX 36 AD9 ALA C 115 PHE C 127 1 13 HELIX 37 AE1 SER C 140 VAL C 153 1 14 HELIX 38 AE2 LYS D 45 SER D 70 1 26 HELIX 39 AE3 ASN D 72 ASN D 82 1 11 HELIX 40 AE4 PRO D 87 GLN D 89 5 3 HELIX 41 AE5 ILE D 90 SER D 95 1 6 HELIX 42 AE6 ARG D 96 LYS D 112 1 17 HELIX 43 AE7 ALA D 115 PHE D 127 1 13 HELIX 44 AE8 SER D 140 ARG D 158 1 19 HELIX 45 AE9 LYS E 45 SER E 70 1 26 HELIX 46 AF1 ASN E 72 ASN E 82 1 11 HELIX 47 AF2 PRO E 87 SER E 95 5 9 HELIX 48 AF3 ARG E 96 LEU E 111 1 16 HELIX 49 AF4 ALA E 115 PHE E 127 1 13 HELIX 50 AF5 SER E 140 LYS E 157 1 18 HELIX 51 AF6 LYS F 45 SER F 70 1 26 HELIX 52 AF7 ASN F 72 ASN F 82 1 11 HELIX 53 AF8 PRO F 87 GLN F 89 5 3 HELIX 54 AF9 ILE F 90 SER F 95 1 6 HELIX 55 AG1 ARG F 96 LEU F 111 1 16 HELIX 56 AG2 ALA F 115 PHE F 127 1 13 HELIX 57 AG3 ASP F 143 LYS F 157 1 15 HELIX 58 AG4 ASP I 207 VAL I 214 1 8 HELIX 59 AG5 PHE I 215 ILE I 216 5 2 HELIX 60 AG6 HIS I 217 ILE I 221 5 5 HELIX 61 AG7 SER I 228 ASN I 234 1 7 HELIX 62 AG8 ASN I 237 PHE I 260 1 24 HELIX 63 AG9 SER I 264 SER I 277 1 14 HELIX 64 AH1 SER I 277 TYR I 288 1 12 HELIX 65 AH2 ASN I 289 LEU I 294 1 6 HELIX 66 AH3 SER I 305 GLY I 310 5 6 HELIX 67 AH4 LEU I 312 ASP I 330 1 19 HELIX 68 AH5 ASP I 330 GLN I 357 1 28 HELIX 69 AH6 ASN I 369 GLY I 379 1 11 HELIX 70 AH7 TYR I 380 ARG I 384 5 5 HELIX 71 AH8 ASN I 419 ASP I 434 1 16 HELIX 72 AH9 ASP I 434 ILE I 448 1 15 HELIX 73 AI1 PRO I 449 VAL I 454 1 6 HELIX 74 AI2 ASP J 207 PHE J 215 1 9 HELIX 75 AI3 ILE J 216 ILE J 221 5 6 HELIX 76 AI4 SER J 228 ASN J 234 1 7 HELIX 77 AI5 ASN J 237 PHE J 260 1 24 HELIX 78 AI6 SER J 264 SER J 277 1 14 HELIX 79 AI7 SER J 277 TYR J 288 1 12 HELIX 80 AI8 ASN J 289 LEU J 294 1 6 HELIX 81 AI9 SER J 305 ASN J 309 5 5 HELIX 82 AJ1 LEU J 312 ASP J 330 1 19 HELIX 83 AJ2 ASP J 330 GLN J 357 1 28 HELIX 84 AJ3 ASN J 369 GLY J 379 1 11 HELIX 85 AJ4 TYR J 380 ARG J 384 5 5 HELIX 86 AJ5 ASN J 419 ASP J 434 1 16 HELIX 87 AJ6 ASP J 434 ALA J 447 1 14 HELIX 88 AJ7 PRO J 449 VAL J 454 1 6 HELIX 89 AJ8 LYS K 45 SER K 70 1 26 HELIX 90 AJ9 ASN K 72 ASN K 82 1 11 HELIX 91 AK1 GLN K 83 VAL K 86 5 4 HELIX 92 AK2 PRO K 87 ARG K 96 5 10 HELIX 93 AK3 TYR K 97 LEU K 111 1 15 HELIX 94 AK4 ALA K 115 GLU K 124 1 10 HELIX 95 AK5 ASN K 125 PHE K 127 5 3 HELIX 96 AK6 SER K 140 VAL K 153 1 14 HELIX 97 AK7 LYS L 45 SER L 70 1 26 HELIX 98 AK8 ASN L 72 ASN L 82 1 11 HELIX 99 AK9 GLN L 83 VAL L 86 5 4 HELIX 100 AL1 PRO L 87 GLN L 89 5 3 HELIX 101 AL2 ILE L 90 SER L 95 1 6 HELIX 102 AL3 ARG L 96 LYS L 112 1 17 HELIX 103 AL4 ALA L 115 PHE L 127 1 13 HELIX 104 AL5 SER L 140 LYS L 157 1 18 HELIX 105 AL6 LYS M 45 SER M 70 1 26 HELIX 106 AL7 ASN M 72 ASN M 82 1 11 HELIX 107 AL8 GLN M 83 VAL M 86 5 4 HELIX 108 AL9 PRO M 87 ARG M 96 5 10 HELIX 109 AM1 TYR M 97 LEU M 111 1 15 HELIX 110 AM2 ALA M 115 PHE M 127 1 13 HELIX 111 AM3 SER M 140 GLU M 151 1 12 HELIX 112 AM4 LYS N 45 SER N 70 1 26 HELIX 113 AM5 ASN N 72 ASN N 82 1 11 HELIX 114 AM6 PRO N 87 GLN N 89 5 3 HELIX 115 AM7 ILE N 90 SER N 95 1 6 HELIX 116 AM8 ARG N 96 LEU N 111 1 16 HELIX 117 AM9 ALA N 115 PHE N 127 1 13 HELIX 118 AN1 SER N 140 LYS N 154 1 15 HELIX 119 AN2 ARG N 155 GLU N 159 5 5 SHEET 1 AA1 3 HIS A 386 LYS A 391 0 SHEET 2 AA1 3 SER A 400 ARG A 405 -1 O ARG A 405 N HIS A 386 SHEET 3 AA1 3 VAL A 411 GLY A 417 -1 O LEU A 412 N CYS A 404 SHEET 1 AA2 3 HIS B 386 LYS B 391 0 SHEET 2 AA2 3 SER B 400 ARG B 405 -1 O GLU B 403 N VAL B 388 SHEET 3 AA2 3 VAL B 411 GLY B 417 -1 O GLY B 415 N VAL B 402 SHEET 1 AA3 3 HIS I 386 LYS I 391 0 SHEET 2 AA3 3 SER I 400 ARG I 405 -1 O GLU I 403 N VAL I 388 SHEET 3 AA3 3 VAL I 411 GLY I 417 -1 O GLY I 417 N SER I 400 SHEET 1 AA4 3 HIS J 386 LYS J 391 0 SHEET 2 AA4 3 SER J 400 ARG J 405 -1 O ARG J 405 N HIS J 386 SHEET 3 AA4 3 VAL J 411 GLY J 417 -1 O LEU J 412 N CYS J 404 LINK O3' C G 2 P 73W G 3 1555 1555 1.58 LINK O3' 73W G 3 P A G 4 1555 1555 1.58 LINK O3' C H 2 P 73W H 3 1555 1555 1.58 LINK O3' 73W H 3 P A H 4 1555 1555 1.58 LINK O3' C O 2 P 73W O 3 1555 1555 1.58 LINK O3' 73W O 3 P A O 4 1555 1555 1.59 LINK O3' C P 2 P 73W P 3 1555 1555 1.58 LINK O3' 73W P 3 P A P 4 1555 1555 1.58 CISPEP 1 TYR A 184 ASP A 185 0 26.33 CISPEP 2 TRP A 198 PRO A 199 0 -6.49 CISPEP 3 TRP B 198 PRO B 199 0 -3.76 CISPEP 4 ASP I 185 PRO I 186 0 -13.45 CISPEP 5 TRP I 198 PRO I 199 0 -6.13 CISPEP 6 TRP J 198 PRO J 199 0 -4.92 SITE 1 AC1 1 TYR A 226 SITE 1 AC2 2 ARG E 85 ASN F 43 SITE 1 AC3 4 LYS E 113 ALA E 115 ILE F 116 GLU F 138 SITE 1 AC4 5 PHE A 298 SER A 305 ASN A 306 G H 11 SITE 2 AC4 5 U H 12 SITE 1 AC5 4 ARG I 213 ASN I 234 HIS I 236 ARG I 239 SITE 1 AC6 3 SER I 250 LEU I 254 ARG I 339 SITE 1 AC7 3 ARG I 239 GLU I 328 HOH I 641 SITE 1 AC8 3 TYR I 226 SER I 228 HOH N 201 SITE 1 AC9 1 ASP I 408 SITE 1 AD1 3 THR J 394 ALA J 395 VAL J 396 CRYST1 62.037 164.065 176.855 90.00 96.78 90.00 P 1 21 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016119 0.000000 0.001917 0.00000 SCALE2 0.000000 0.006095 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005694 0.00000