HEADER HYDROLASE/DNA 23-AUG-16 5T2N TITLE ENGINEERED VARIANT OF I-ONUI MEGANUCLEASE TARGETING THE ANOPHELES TITLE 2 AGAP007280 GENE; HARBORS 38 POINT MUTATIONS RELATIVE TO WILD-TYPE I- TITLE 3 ONUI COMPND MOL_ID: 1; COMPND 2 MOLECULE: I-ONUI_E-AG007820; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (26-MER); COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: DNA (26-MER); COMPND 11 CHAIN: C; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)RIL; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 10 ORGANISM_TAXID: 32630; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS MEGANUCLEASE, ENGINEERED PROTEIN, DNA COMPLEX, HOMING ENDONUCLEASE, KEYWDS 2 HYDROLASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR B.L.STODDARD,R.WERTHER REVDAT 5 04-OCT-23 5T2N 1 REMARK REVDAT 4 23-JUN-21 5T2N 1 JRNL LINK REVDAT 3 25-DEC-19 5T2N 1 REMARK REVDAT 2 27-SEP-17 5T2N 1 REMARK REVDAT 1 03-MAY-17 5T2N 0 JRNL AUTH R.WERTHER,J.P.HALLINAN,A.R.LAMBERT,K.HAVENS,M.POGSON, JRNL AUTH 2 J.JARJOUR,R.GALIZI,N.WINDBICHLER,A.CRISANTI,T.NOLAN, JRNL AUTH 3 B.L.STODDARD JRNL TITL CRYSTALLOGRAPHIC ANALYSES ILLUSTRATE SIGNIFICANT PLASTICITY JRNL TITL 2 AND EFFICIENT RECODING OF MEGANUCLEASE TARGET SPECIFICITY. JRNL REF NUCLEIC ACIDS RES. V. 45 8621 2017 JRNL REFN ESSN 1362-4962 JRNL PMID 28637173 JRNL DOI 10.1093/NAR/GKX544 REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 28473 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1997 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.9172 - 5.0070 0.99 2054 155 0.1741 0.1913 REMARK 3 2 5.0070 - 3.9751 0.99 1933 147 0.1879 0.2143 REMARK 3 3 3.9751 - 3.4729 0.99 1919 144 0.2094 0.2636 REMARK 3 4 3.4729 - 3.1555 0.98 1849 139 0.2337 0.2765 REMARK 3 5 3.1555 - 2.9294 1.00 1897 144 0.2534 0.3176 REMARK 3 6 2.9294 - 2.7567 1.00 1915 145 0.2714 0.3237 REMARK 3 7 2.7567 - 2.6187 1.00 1887 141 0.2777 0.3527 REMARK 3 8 2.6187 - 2.5047 1.00 1885 143 0.2698 0.3051 REMARK 3 9 2.5047 - 2.4083 1.00 1840 138 0.2921 0.3650 REMARK 3 10 2.4083 - 2.3252 1.00 1893 143 0.2830 0.3218 REMARK 3 11 2.3252 - 2.2525 1.00 1849 140 0.2795 0.3530 REMARK 3 12 2.2525 - 2.1881 1.00 1890 140 0.2849 0.2970 REMARK 3 13 2.1881 - 2.1305 1.00 1852 140 0.2805 0.3531 REMARK 3 14 2.1305 - 2.0785 0.97 1813 138 0.2973 0.3418 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.660 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.74 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3505 REMARK 3 ANGLE : 0.697 4961 REMARK 3 CHIRALITY : 0.029 561 REMARK 3 PLANARITY : 0.003 446 REMARK 3 DIHEDRAL : 22.446 1344 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5T2N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1000223557. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAY-16 REMARK 200 TEMPERATURE (KELVIN) : 108 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.084 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28554 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.080 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 11.90 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.08 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.90 REMARK 200 R MERGE FOR SHELL (I) : 0.79300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: 3QQY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05M AMMONIUM SULFATE, 0.05M BIS-TRIS REMARK 280 PH 6.5, 35% PENTAERYTHRITOL ETHOXYLATE (15/4 EO/OH), VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.41700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.44150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.71050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 83.44150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.41700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.71050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -114.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 6 REMARK 465 ALA A 7 REMARK 465 SER A 8 REMARK 465 SER A 155 REMARK 465 LYS A 156 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 36 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 65 CG CD CE NZ REMARK 470 GLU A 85 CG CD OE1 OE2 REMARK 470 LYS A 88 CG CD CE NZ REMARK 470 ASP A 92 CG OD1 OD2 REMARK 470 LYS A 124 CG CD CE NZ REMARK 470 GLU A 125 CG CD OE1 OE2 REMARK 470 ASN A 126 CG OD1 ND2 REMARK 470 LYS A 129 CG CD CE NZ REMARK 470 LYS A 137 CG CD CE NZ REMARK 470 GLU A 145 CG CD OE1 OE2 REMARK 470 LYS A 148 CG CD CE NZ REMARK 470 GLU A 152 CG CD OE1 OE2 REMARK 470 ILE A 154 CG1 CG2 CD1 REMARK 470 GLU A 157 CG CD OE1 OE2 REMARK 470 LEU A 160 CG CD1 CD2 REMARK 470 LYS A 187 CG CD CE NZ REMARK 470 LYS A 189 CG CD CE NZ REMARK 470 THR A 192 OG1 CG2 REMARK 470 LYS A 209 CG CD CE NZ REMARK 470 SER A 230 OG REMARK 470 GLU A 231 CG CD OE1 OE2 REMARK 470 ASP A 247 CG OD1 OD2 REMARK 470 LYS A 274 CG CD CE NZ REMARK 470 GLU A 284 CG CD OE1 OE2 REMARK 470 LYS A 291 CG CD CE NZ REMARK 470 LYS A 292 CG CD CE NZ REMARK 470 ASN A 296 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA C 7 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG C 18 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DG C 24 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 120 33.67 74.05 REMARK 500 ASN A 139 -110.98 46.98 REMARK 500 PRO A 151 92.24 -66.68 REMARK 500 ILE A 153 146.39 45.39 REMARK 500 SER A 230 -113.56 56.46 REMARK 500 LYS A 279 15.32 59.20 REMARK 500 ASN A 298 -130.46 56.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 21 O REMARK 620 2 GLU A 178 OE2 90.9 REMARK 620 3 HOH A 508 O 92.2 83.7 REMARK 620 4 DC B 14 OP1 169.0 79.3 91.5 REMARK 620 5 HOH B 107 O 111.8 156.3 88.7 78.5 REMARK 620 6 DG C 16 OP2 79.9 104.1 168.9 97.7 87.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 22 OE2 REMARK 620 2 GLY A 177 O 85.0 REMARK 620 3 HOH A 507 O 86.2 87.7 REMARK 620 4 HOH A 533 O 168.2 89.3 83.3 REMARK 620 5 DT B 15 OP2 99.2 78.2 164.3 89.7 REMARK 620 6 DA C 15 OP1 91.4 176.1 90.6 93.9 103.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 22 OE1 REMARK 620 2 GLU A 22 OE2 43.9 REMARK 620 3 GLU A 178 OE1 119.1 102.0 REMARK 620 4 DC B 14 O3' 159.9 134.4 80.8 REMARK 620 5 DT B 15 OP2 114.7 78.5 96.5 56.1 REMARK 620 6 DA C 15 O3' 75.1 107.6 146.3 89.6 104.7 REMARK 620 7 DG C 16 OP2 84.2 127.1 94.9 97.4 148.7 54.1 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5T2H RELATED DB: PDB REMARK 900 RELATED ID: 5T2J RELATED DB: PDB REMARK 900 RELATED ID: 5T2O RELATED DB: PDB DBREF 5T2N A 6 301 PDB 5T2N 5T2N 6 301 DBREF 5T2N B -1 24 PDB 5T2N 5T2N -1 24 DBREF 5T2N C 1 26 PDB 5T2N 5T2N 1 26 SEQRES 1 A 296 MET ALA SER SER ILE ASN PRO TRP ILE LEU THR GLY PHE SEQRES 2 A 296 ALA ASP ALA GLU GLY SER PHE ILE LEU ARG ILE ARG ASN SEQRES 3 A 296 ASN ASN GLY MET ARG VAL GLY TYR LEU THR GLU LEU ILE SEQRES 4 A 296 PHE SER ILE LYS LEU HIS ASN LYS ASP LYS SER ILE LEU SEQRES 5 A 296 GLU ASN ILE GLN SER THR TRP LYS VAL GLY LYS ILE THR SEQRES 6 A 296 ASN ASN GLY ASP GLN ALA VAL MET LEU ARG VAL SER ARG SEQRES 7 A 296 PHE GLU ASP LEU LYS VAL ILE ILE ASP HIS PHE GLU LYS SEQRES 8 A 296 TYR PRO LEU ILE THR GLN LYS LEU GLY ASP TYR LYS LEU SEQRES 9 A 296 PHE LYS GLN ALA TYR SER VAL MET GLU ASN LYS GLU HIS SEQRES 10 A 296 LEU LYS GLU ASN GLY ILE LYS GLU LEU VAL ARG ILE LYS SEQRES 11 A 296 ALA LYS MET ASN TRP GLY LEU THR ASP GLU LEU LYS LYS SEQRES 12 A 296 ALA PHE PRO GLU ILE ILE SER LYS GLU ARG PRO LEU ILE SEQRES 13 A 296 ASN LYS ASN ILE PRO ASN LEU LYS TRP LEU ALA GLY PHE SEQRES 14 A 296 THR SER GLY GLU GLY HIS PHE GLY VAL ASN LEU TRP LYS SEQRES 15 A 296 ARG LYS GLY GLY THR HIS VAL GLY VAL GLN LEU VAL PHE SEQRES 16 A 296 GLY ILE SER GLN HIS ILE ARG ASP LYS ASN LEU MET ASN SEQRES 17 A 296 SER LEU ILE THR TYR LEU GLY CYS GLY TYR ILE LEU GLU SEQRES 18 A 296 LYS ASN ARG SER GLU LEU SER TRP LEU ASP PHE ARG VAL SEQRES 19 A 296 THR LYS PHE SER ASP ILE ASN ASP LYS ILE ILE PRO VAL SEQRES 20 A 296 PHE GLN GLU ASN THR LEU ILE GLY VAL LYS LEU GLU ASP SEQRES 21 A 296 PHE GLU ASP TRP CYS LYS VAL ALA LYS LEU ILE GLU GLU SEQRES 22 A 296 LYS LYS HIS LEU THR GLU SER GLY LEU ASP GLU ILE LYS SEQRES 23 A 296 LYS ILE LYS LEU ASN MET ASN LYS GLY ARG SEQRES 1 B 26 DG DG DG DC DC DT DC DC DT DC DA DC DT SEQRES 2 B 26 DT DT DC DT DT DC DC DT DC DA DC DC DG SEQRES 1 C 26 DC DC DG DG DT DG DA DG DG DA DA DG DA SEQRES 2 C 26 DA DA DG DT DG DA DG DG DA DG DG DC DC HET CA A 401 1 HET CA A 402 1 HET CA A 403 1 HET CA A 404 1 HETNAM CA CALCIUM ION FORMUL 4 CA 4(CA 2+) FORMUL 8 HOH *59(H2 O) HELIX 1 AA1 ASN A 11 GLU A 22 1 12 HELIX 2 AA2 ASP A 53 LYS A 65 1 13 HELIX 3 AA3 ASP A 86 TYR A 97 1 12 HELIX 4 AA4 GLN A 102 ASN A 119 1 18 HELIX 5 AA5 LYS A 120 LEU A 123 5 4 HELIX 6 AA6 LYS A 124 ALA A 136 1 13 HELIX 7 AA7 THR A 143 PHE A 150 1 8 HELIX 8 AA8 ASN A 167 GLU A 178 1 12 HELIX 9 AA9 ASP A 208 GLY A 220 1 13 HELIX 10 AB1 LYS A 241 LYS A 248 1 8 HELIX 11 AB2 LYS A 248 ASN A 256 1 9 HELIX 12 AB3 GLY A 260 GLU A 278 1 19 HELIX 13 AB4 LYS A 279 LEU A 282 5 4 HELIX 14 AB5 THR A 283 MET A 297 1 15 HELIX 15 AB6 ASN A 298 ARG A 301 5 4 SHEET 1 AA1 4 GLY A 23 ASN A 31 0 SHEET 2 AA1 4 TYR A 39 HIS A 50 -1 O ILE A 44 N ILE A 26 SHEET 3 AA1 4 ALA A 76 VAL A 81 -1 O VAL A 77 N LEU A 49 SHEET 4 AA1 4 LYS A 68 ASN A 71 -1 N THR A 70 O MET A 78 SHEET 1 AA2 4 GLY A 179 LYS A 187 0 SHEET 2 AA2 4 VAL A 194 HIS A 205 -1 O GLY A 195 N TRP A 186 SHEET 3 AA2 4 LEU A 232 VAL A 239 -1 O PHE A 237 N ILE A 202 SHEET 4 AA2 4 TYR A 223 ARG A 229 -1 N ARG A 229 O LEU A 232 LINK O ALA A 21 CA CA A 402 1555 1555 2.38 LINK OE2 GLU A 22 CA CA A 401 1555 1555 2.33 LINK OE1 GLU A 22 CA CA A 403 1555 1555 2.35 LINK OE2 GLU A 22 CA CA A 403 1555 1555 3.16 LINK O GLY A 177 CA CA A 401 1555 1555 2.39 LINK OE2 GLU A 178 CA CA A 402 1555 1555 2.33 LINK OE1 GLU A 178 CA CA A 403 1555 1555 2.33 LINK CA CA A 401 O HOH A 507 1555 1555 2.51 LINK CA CA A 401 O HOH A 533 1555 1555 2.39 LINK CA CA A 401 OP2 DT B 15 1555 1555 2.36 LINK CA CA A 401 OP1 DA C 15 1555 1555 2.37 LINK CA CA A 402 O HOH A 508 1555 1555 2.40 LINK CA CA A 402 OP1 DC B 14 1555 1555 2.33 LINK CA CA A 402 O HOH B 107 1555 1555 2.52 LINK CA CA A 402 OP2 DG C 16 1555 1555 2.34 LINK CA CA A 403 O3' DC B 14 1555 1555 2.83 LINK CA CA A 403 OP2 DT B 15 1555 1555 2.42 LINK CA CA A 403 O3' DA C 15 1555 1555 2.88 LINK CA CA A 403 OP2 DG C 16 1555 1555 2.48 LINK CA CA A 404 O HOH A 531 1555 1555 2.45 SITE 1 AC1 7 GLU A 22 GLY A 177 CA A 403 HOH A 507 SITE 2 AC1 7 HOH A 533 DT B 15 DA C 15 SITE 1 AC2 6 ALA A 21 GLU A 178 HOH A 508 DC B 14 SITE 2 AC2 6 HOH B 107 DG C 16 SITE 1 AC3 7 GLU A 22 GLU A 178 CA A 401 DC B 14 SITE 2 AC3 7 DT B 15 DA C 15 DG C 16 SITE 1 AC4 2 LYS A 299 HOH A 531 CRYST1 40.834 67.421 166.883 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024489 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014832 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005992 0.00000