HEADER METAL TRANSPORT 29-AUG-16 5T4D TITLE CRYO-EM STRUCTURE OF POLYCYSTIC KIDNEY DISEASE PROTEIN 2 (PKD2), TITLE 2 RESIDUES 198-703 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HPKD:198-703, POLYCYSTIN-2; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: AUTOSOMAL DOMINANT POLYCYSTIC KIDNEY DISEASE TYPE II COMPND 5 PROTEIN,POLYCYSTIC KIDNEY DISEASE 2 PROTEIN,POLYCYSTWIN,R48321, COMPND 6 TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL SUBFAMILY P MEMBER 2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PKD2, TRPP2; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293S GNTI-/- KEYWDS TRP CHANNEL, PKD2, NANODISC, TRPP, METAL TRANSPORT EXPDTA ELECTRON MICROSCOPY AUTHOR P.S.SHEN,X.YANG,P.G.DECAEN,X.LIU,D.BULKLEY,D.E.CLAPHAM,E.CAO REVDAT 6 29-JUL-20 5T4D 1 COMPND REMARK HETNAM LINK REVDAT 6 2 1 SITE REVDAT 5 06-NOV-19 5T4D 1 CRYST1 SCALE REVDAT 4 08-NOV-17 5T4D 1 REMARK REVDAT 3 30-NOV-16 5T4D 1 COMPND REVDAT 2 09-NOV-16 5T4D 1 TITLE REVDAT 1 02-NOV-16 5T4D 0 JRNL AUTH P.S.SHEN,X.YANG,P.G.DECAEN,X.LIU,D.BULKLEY,D.E.CLAPHAM,E.CAO JRNL TITL THE STRUCTURE OF THE POLYCYSTIC KIDNEY DISEASE CHANNEL PKD2 JRNL TITL 2 IN LIPID NANODISCS. JRNL REF CELL V. 167 763 2016 JRNL REFN ISSN 1097-4172 JRNL PMID 27768895 JRNL DOI 10.1016/J.CELL.2016.09.048 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : SAMVIEWER, UCSFIMAGE4, CTFFIND4, COOT, REMARK 3 RELION, RELION, RELION, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : FOURIER SPACE REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.000 REMARK 3 NUMBER OF PARTICLES : 93805 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 5T4D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1000223685. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HPKD:198-703 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 2.00 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : BLOT FOR 7 SECONDS, -1 MM REMARK 245 OFFSET BEFORE PLUNGING REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 1500 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI POLARA 300 REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 600.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2400.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.00 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 1.35 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 31000 REMARK 245 CALIBRATED MAGNIFICATION : 41132 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 193 REMARK 465 ALA A 194 REMARK 465 MET A 195 REMARK 465 GLY A 196 REMARK 465 SER A 197 REMARK 465 ARG A 198 REMARK 465 GLY A 199 REMARK 465 LEU A 200 REMARK 465 TRP A 201 REMARK 465 GLY A 202 REMARK 465 THR A 203 REMARK 465 ARG A 204 REMARK 465 LEU A 205 REMARK 465 MET A 206 REMARK 465 GLU A 207 REMARK 465 GLU A 208 REMARK 465 SER A 209 REMARK 465 SER A 210 REMARK 465 THR A 211 REMARK 465 ASN A 212 REMARK 465 ARG A 213 REMARK 465 GLU A 214 REMARK 465 LYS A 215 REMARK 465 GLN A 296 REMARK 465 PRO A 297 REMARK 465 SER A 298 REMARK 465 ASN A 299 REMARK 465 GLN A 300 REMARK 465 THR A 301 REMARK 465 GLU A 494 REMARK 465 ILE A 495 REMARK 465 ARG A 496 REMARK 465 ILE A 497 REMARK 465 HIS A 498 REMARK 465 LYS A 499 REMARK 465 LEU A 500 REMARK 465 HIS A 501 REMARK 465 TYR A 502 REMARK 465 PHE A 503 REMARK 465 LYS A 695 REMARK 465 ALA A 696 REMARK 465 GLU A 697 REMARK 465 MET A 698 REMARK 465 GLU A 699 REMARK 465 LEU A 700 REMARK 465 SER A 701 REMARK 465 ASP A 702 REMARK 465 GLY B 193 REMARK 465 ALA B 194 REMARK 465 MET B 195 REMARK 465 GLY B 196 REMARK 465 SER B 197 REMARK 465 ARG B 198 REMARK 465 GLY B 199 REMARK 465 LEU B 200 REMARK 465 TRP B 201 REMARK 465 GLY B 202 REMARK 465 THR B 203 REMARK 465 ARG B 204 REMARK 465 LEU B 205 REMARK 465 MET B 206 REMARK 465 GLU B 207 REMARK 465 GLU B 208 REMARK 465 SER B 209 REMARK 465 SER B 210 REMARK 465 THR B 211 REMARK 465 ASN B 212 REMARK 465 ARG B 213 REMARK 465 GLU B 214 REMARK 465 LYS B 215 REMARK 465 GLN B 296 REMARK 465 PRO B 297 REMARK 465 SER B 298 REMARK 465 ASN B 299 REMARK 465 GLN B 300 REMARK 465 THR B 301 REMARK 465 GLU B 494 REMARK 465 ILE B 495 REMARK 465 ARG B 496 REMARK 465 ILE B 497 REMARK 465 HIS B 498 REMARK 465 LYS B 499 REMARK 465 LEU B 500 REMARK 465 HIS B 501 REMARK 465 TYR B 502 REMARK 465 PHE B 503 REMARK 465 LYS B 695 REMARK 465 ALA B 696 REMARK 465 GLU B 697 REMARK 465 MET B 698 REMARK 465 GLU B 699 REMARK 465 LEU B 700 REMARK 465 SER B 701 REMARK 465 ASP B 702 REMARK 465 GLY C 193 REMARK 465 ALA C 194 REMARK 465 MET C 195 REMARK 465 GLY C 196 REMARK 465 SER C 197 REMARK 465 ARG C 198 REMARK 465 GLY C 199 REMARK 465 LEU C 200 REMARK 465 TRP C 201 REMARK 465 GLY C 202 REMARK 465 THR C 203 REMARK 465 ARG C 204 REMARK 465 LEU C 205 REMARK 465 MET C 206 REMARK 465 GLU C 207 REMARK 465 GLU C 208 REMARK 465 SER C 209 REMARK 465 SER C 210 REMARK 465 THR C 211 REMARK 465 ASN C 212 REMARK 465 ARG C 213 REMARK 465 GLU C 214 REMARK 465 LYS C 215 REMARK 465 GLN C 296 REMARK 465 PRO C 297 REMARK 465 SER C 298 REMARK 465 ASN C 299 REMARK 465 GLN C 300 REMARK 465 THR C 301 REMARK 465 GLU C 494 REMARK 465 ILE C 495 REMARK 465 ARG C 496 REMARK 465 ILE C 497 REMARK 465 HIS C 498 REMARK 465 LYS C 499 REMARK 465 LEU C 500 REMARK 465 HIS C 501 REMARK 465 TYR C 502 REMARK 465 PHE C 503 REMARK 465 LYS C 695 REMARK 465 ALA C 696 REMARK 465 GLU C 697 REMARK 465 MET C 698 REMARK 465 GLU C 699 REMARK 465 LEU C 700 REMARK 465 SER C 701 REMARK 465 ASP C 702 REMARK 465 GLY D 193 REMARK 465 ALA D 194 REMARK 465 MET D 195 REMARK 465 GLY D 196 REMARK 465 SER D 197 REMARK 465 ARG D 198 REMARK 465 GLY D 199 REMARK 465 LEU D 200 REMARK 465 TRP D 201 REMARK 465 GLY D 202 REMARK 465 THR D 203 REMARK 465 ARG D 204 REMARK 465 LEU D 205 REMARK 465 MET D 206 REMARK 465 GLU D 207 REMARK 465 GLU D 208 REMARK 465 SER D 209 REMARK 465 SER D 210 REMARK 465 THR D 211 REMARK 465 ASN D 212 REMARK 465 ARG D 213 REMARK 465 GLU D 214 REMARK 465 LYS D 215 REMARK 465 GLN D 296 REMARK 465 PRO D 297 REMARK 465 SER D 298 REMARK 465 ASN D 299 REMARK 465 GLN D 300 REMARK 465 THR D 301 REMARK 465 GLU D 494 REMARK 465 ILE D 495 REMARK 465 ARG D 496 REMARK 465 ILE D 497 REMARK 465 HIS D 498 REMARK 465 LYS D 499 REMARK 465 LEU D 500 REMARK 465 HIS D 501 REMARK 465 TYR D 502 REMARK 465 PHE D 503 REMARK 465 LYS D 695 REMARK 465 ALA D 696 REMARK 465 GLU D 697 REMARK 465 MET D 698 REMARK 465 GLU D 699 REMARK 465 LEU D 700 REMARK 465 SER D 701 REMARK 465 ASP D 702 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 216 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 217 CG CD1 CD2 REMARK 470 LYS A 218 CG CD CE NZ REMARK 470 SER A 219 OG REMARK 470 VAL A 220 CG1 CG2 REMARK 470 ARG A 222 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 223 CG CD OE1 OE2 REMARK 470 MET A 241 CG SD CE REMARK 470 SER A 263 OG REMARK 470 LYS A 264 CG CD CE NZ REMARK 470 THR A 265 OG1 CG2 REMARK 470 LYS A 267 CG CD CE NZ REMARK 470 GLU A 277 CG CD OE1 OE2 REMARK 470 LYS A 294 CG CD CE NZ REMARK 470 MET A 295 CG SD CE REMARK 470 GLU A 302 CG CD OE1 OE2 REMARK 470 ASP A 304 CG OD1 OD2 REMARK 470 ASN A 305 CG OD1 ND2 REMARK 470 GLN A 335 CG CD OE1 NE2 REMARK 470 ASP A 336 CG OD1 OD2 REMARK 470 ASP A 339 CG OD1 OD2 REMARK 470 GLU A 340 CG CD OE1 OE2 REMARK 470 LYS A 342 CG CD CE NZ REMARK 470 LYS A 372 CG CD CE NZ REMARK 470 ASP A 373 CG OD1 OD2 REMARK 470 ASP A 416 CG OD1 OD2 REMARK 470 ASP A 425 CG OD1 OD2 REMARK 470 ASP A 470 CG OD1 OD2 REMARK 470 GLU A 477 CG CD OE1 OE2 REMARK 470 PHE A 482 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 490 CG CD OE1 OE2 REMARK 470 GLU A 491 CG CD OE1 OE2 REMARK 470 GLU A 533 CG CD OE1 OE2 REMARK 470 GLU A 540 CG CD OE1 OE2 REMARK 470 ASP A 541 CG OD1 OD2 REMARK 470 GLU A 549 CG CD OE1 OE2 REMARK 470 ASP A 596 CG OD1 OD2 REMARK 470 ASP A 624 CG OD1 OD2 REMARK 470 ASP A 625 CG OD1 OD2 REMARK 470 TYR B 216 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU B 217 CG CD1 CD2 REMARK 470 LYS B 218 CG CD CE NZ REMARK 470 SER B 219 OG REMARK 470 VAL B 220 CG1 CG2 REMARK 470 ARG B 222 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 223 CG CD OE1 OE2 REMARK 470 MET B 241 CG SD CE REMARK 470 SER B 263 OG REMARK 470 LYS B 264 CG CD CE NZ REMARK 470 THR B 265 OG1 CG2 REMARK 470 LYS B 267 CG CD CE NZ REMARK 470 GLU B 277 CG CD OE1 OE2 REMARK 470 LYS B 294 CG CD CE NZ REMARK 470 MET B 295 CG SD CE REMARK 470 GLU B 302 CG CD OE1 OE2 REMARK 470 ASP B 304 CG OD1 OD2 REMARK 470 ASN B 305 CG OD1 ND2 REMARK 470 GLN B 335 CG CD OE1 NE2 REMARK 470 ASP B 336 CG OD1 OD2 REMARK 470 ASP B 339 CG OD1 OD2 REMARK 470 GLU B 340 CG CD OE1 OE2 REMARK 470 LYS B 342 CG CD CE NZ REMARK 470 LYS B 372 CG CD CE NZ REMARK 470 ASP B 373 CG OD1 OD2 REMARK 470 ASP B 416 CG OD1 OD2 REMARK 470 ASP B 425 CG OD1 OD2 REMARK 470 ASP B 470 CG OD1 OD2 REMARK 470 GLU B 477 CG CD OE1 OE2 REMARK 470 PHE B 482 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 490 CG CD OE1 OE2 REMARK 470 GLU B 491 CG CD OE1 OE2 REMARK 470 GLU B 533 CG CD OE1 OE2 REMARK 470 GLU B 540 CG CD OE1 OE2 REMARK 470 ASP B 541 CG OD1 OD2 REMARK 470 GLU B 549 CG CD OE1 OE2 REMARK 470 ASP B 596 CG OD1 OD2 REMARK 470 ASP B 624 CG OD1 OD2 REMARK 470 ASP B 625 CG OD1 OD2 REMARK 470 TYR C 216 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU C 217 CG CD1 CD2 REMARK 470 LYS C 218 CG CD CE NZ REMARK 470 SER C 219 OG REMARK 470 VAL C 220 CG1 CG2 REMARK 470 ARG C 222 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 223 CG CD OE1 OE2 REMARK 470 MET C 241 CG SD CE REMARK 470 SER C 263 OG REMARK 470 LYS C 264 CG CD CE NZ REMARK 470 THR C 265 OG1 CG2 REMARK 470 LYS C 267 CG CD CE NZ REMARK 470 GLU C 277 CG CD OE1 OE2 REMARK 470 LYS C 294 CG CD CE NZ REMARK 470 MET C 295 CG SD CE REMARK 470 GLU C 302 CG CD OE1 OE2 REMARK 470 ASP C 304 CG OD1 OD2 REMARK 470 ASN C 305 CG OD1 ND2 REMARK 470 GLN C 335 CG CD OE1 NE2 REMARK 470 ASP C 336 CG OD1 OD2 REMARK 470 ASP C 339 CG OD1 OD2 REMARK 470 GLU C 340 CG CD OE1 OE2 REMARK 470 LYS C 342 CG CD CE NZ REMARK 470 LYS C 372 CG CD CE NZ REMARK 470 ASP C 373 CG OD1 OD2 REMARK 470 ASP C 416 CG OD1 OD2 REMARK 470 ASP C 425 CG OD1 OD2 REMARK 470 ASP C 470 CG OD1 OD2 REMARK 470 GLU C 477 CG CD OE1 OE2 REMARK 470 PHE C 482 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU C 490 CG CD OE1 OE2 REMARK 470 GLU C 491 CG CD OE1 OE2 REMARK 470 GLU C 533 CG CD OE1 OE2 REMARK 470 GLU C 540 CG CD OE1 OE2 REMARK 470 ASP C 541 CG OD1 OD2 REMARK 470 GLU C 549 CG CD OE1 OE2 REMARK 470 ASP C 596 CG OD1 OD2 REMARK 470 ASP C 624 CG OD1 OD2 REMARK 470 ASP C 625 CG OD1 OD2 REMARK 470 TYR D 216 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU D 217 CG CD1 CD2 REMARK 470 LYS D 218 CG CD CE NZ REMARK 470 SER D 219 OG REMARK 470 VAL D 220 CG1 CG2 REMARK 470 ARG D 222 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 223 CG CD OE1 OE2 REMARK 470 MET D 241 CG SD CE REMARK 470 SER D 263 OG REMARK 470 LYS D 264 CG CD CE NZ REMARK 470 THR D 265 OG1 CG2 REMARK 470 LYS D 267 CG CD CE NZ REMARK 470 GLU D 277 CG CD OE1 OE2 REMARK 470 LYS D 294 CG CD CE NZ REMARK 470 MET D 295 CG SD CE REMARK 470 GLU D 302 CG CD OE1 OE2 REMARK 470 ASP D 304 CG OD1 OD2 REMARK 470 ASN D 305 CG OD1 ND2 REMARK 470 GLN D 335 CG CD OE1 NE2 REMARK 470 ASP D 336 CG OD1 OD2 REMARK 470 ASP D 339 CG OD1 OD2 REMARK 470 GLU D 340 CG CD OE1 OE2 REMARK 470 LYS D 342 CG CD CE NZ REMARK 470 LYS D 372 CG CD CE NZ REMARK 470 ASP D 373 CG OD1 OD2 REMARK 470 ASP D 416 CG OD1 OD2 REMARK 470 ASP D 425 CG OD1 OD2 REMARK 470 ASP D 470 CG OD1 OD2 REMARK 470 GLU D 477 CG CD OE1 OE2 REMARK 470 PHE D 482 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU D 490 CG CD OE1 OE2 REMARK 470 GLU D 491 CG CD OE1 OE2 REMARK 470 GLU D 533 CG CD OE1 OE2 REMARK 470 GLU D 540 CG CD OE1 OE2 REMARK 470 ASP D 541 CG OD1 OD2 REMARK 470 GLU D 549 CG CD OE1 OE2 REMARK 470 ASP D 596 CG OD1 OD2 REMARK 470 ASP D 624 CG OD1 OD2 REMARK 470 ASP D 625 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR B 227 O VAL B 569 2.12 REMARK 500 OH TYR A 227 O VAL A 569 2.12 REMARK 500 OH TYR C 227 O VAL C 569 2.12 REMARK 500 OH TYR D 227 O VAL D 569 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 257 -61.44 -95.36 REMARK 500 PHE A 310 -0.33 64.94 REMARK 500 TYR A 311 -11.67 81.12 REMARK 500 ASN A 328 -71.76 -56.50 REMARK 500 LEU A 395 -163.94 -79.51 REMARK 500 LYS A 411 -71.61 -55.79 REMARK 500 ASN A 432 -73.40 -74.29 REMARK 500 VAL A 466 -67.70 -134.71 REMARK 500 ILE A 526 -77.63 -102.03 REMARK 500 ARG A 528 -75.59 -109.63 REMARK 500 GLN A 622 -63.49 -127.11 REMARK 500 PHE B 257 -61.38 -95.32 REMARK 500 PHE B 310 -0.28 64.87 REMARK 500 TYR B 311 -11.60 81.01 REMARK 500 ASN B 328 -71.71 -56.58 REMARK 500 LEU B 395 -163.99 -79.54 REMARK 500 LYS B 411 -71.56 -55.77 REMARK 500 ASN B 432 -73.40 -74.32 REMARK 500 VAL B 466 -67.76 -134.68 REMARK 500 ILE B 526 -77.65 -102.00 REMARK 500 ARG B 528 -75.61 -109.58 REMARK 500 GLN B 622 -63.44 -127.15 REMARK 500 PHE C 257 -61.37 -95.32 REMARK 500 PHE C 310 -0.35 64.90 REMARK 500 TYR C 311 -11.68 81.14 REMARK 500 ASN C 328 -71.82 -56.50 REMARK 500 LEU C 395 -164.00 -79.52 REMARK 500 LYS C 411 -71.54 -55.77 REMARK 500 ASN C 432 -73.41 -74.31 REMARK 500 VAL C 466 -67.78 -134.67 REMARK 500 ILE C 526 -77.66 -102.02 REMARK 500 ARG C 528 -75.57 -109.63 REMARK 500 GLN C 622 -63.56 -127.11 REMARK 500 PHE D 257 -61.43 -95.40 REMARK 500 PHE D 310 -0.33 64.94 REMARK 500 TYR D 311 -11.59 81.08 REMARK 500 ASN D 328 -71.72 -56.63 REMARK 500 LEU D 395 -163.96 -79.54 REMARK 500 LYS D 411 -71.55 -55.77 REMARK 500 ASN D 432 -73.40 -74.28 REMARK 500 VAL D 466 -67.74 -134.63 REMARK 500 ILE D 526 -77.68 -102.01 REMARK 500 ARG D 528 -75.58 -109.60 REMARK 500 GLN D 622 -63.57 -127.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 432 ILE A 433 148.08 REMARK 500 ASN B 432 ILE B 433 148.04 REMARK 500 ASN C 432 ILE C 433 148.09 REMARK 500 ASN D 432 ILE D 433 148.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-8354 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF POLYCYSTIC KIDNEY DISEASE PROTEIN 2 (PKD2) REMARK 900 RELATED ID: EMD-8355 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-8356 RELATED DB: EMDB DBREF 5T4D A 198 702 UNP Q13563 PKD2_HUMAN 198 702 DBREF 5T4D B 198 702 UNP Q13563 PKD2_HUMAN 198 702 DBREF 5T4D C 198 702 UNP Q13563 PKD2_HUMAN 198 702 DBREF 5T4D D 198 702 UNP Q13563 PKD2_HUMAN 198 702 SEQADV 5T4D GLY A 193 UNP Q13563 EXPRESSION TAG SEQADV 5T4D ALA A 194 UNP Q13563 EXPRESSION TAG SEQADV 5T4D MET A 195 UNP Q13563 EXPRESSION TAG SEQADV 5T4D GLY A 196 UNP Q13563 EXPRESSION TAG SEQADV 5T4D SER A 197 UNP Q13563 EXPRESSION TAG SEQADV 5T4D GLY B 193 UNP Q13563 EXPRESSION TAG SEQADV 5T4D ALA B 194 UNP Q13563 EXPRESSION TAG SEQADV 5T4D MET B 195 UNP Q13563 EXPRESSION TAG SEQADV 5T4D GLY B 196 UNP Q13563 EXPRESSION TAG SEQADV 5T4D SER B 197 UNP Q13563 EXPRESSION TAG SEQADV 5T4D GLY C 193 UNP Q13563 EXPRESSION TAG SEQADV 5T4D ALA C 194 UNP Q13563 EXPRESSION TAG SEQADV 5T4D MET C 195 UNP Q13563 EXPRESSION TAG SEQADV 5T4D GLY C 196 UNP Q13563 EXPRESSION TAG SEQADV 5T4D SER C 197 UNP Q13563 EXPRESSION TAG SEQADV 5T4D GLY D 193 UNP Q13563 EXPRESSION TAG SEQADV 5T4D ALA D 194 UNP Q13563 EXPRESSION TAG SEQADV 5T4D MET D 195 UNP Q13563 EXPRESSION TAG SEQADV 5T4D GLY D 196 UNP Q13563 EXPRESSION TAG SEQADV 5T4D SER D 197 UNP Q13563 EXPRESSION TAG SEQRES 1 A 510 GLY ALA MET GLY SER ARG GLY LEU TRP GLY THR ARG LEU SEQRES 2 A 510 MET GLU GLU SER SER THR ASN ARG GLU LYS TYR LEU LYS SEQRES 3 A 510 SER VAL LEU ARG GLU LEU VAL THR TYR LEU LEU PHE LEU SEQRES 4 A 510 ILE VAL LEU CYS ILE LEU THR TYR GLY MET MET SER SER SEQRES 5 A 510 ASN VAL TYR TYR TYR THR ARG MET MET SER GLN LEU PHE SEQRES 6 A 510 LEU ASP THR PRO VAL SER LYS THR GLU LYS THR ASN PHE SEQRES 7 A 510 LYS THR LEU SER SER MET GLU ASP PHE TRP LYS PHE THR SEQRES 8 A 510 GLU GLY SER LEU LEU ASP GLY LEU TYR TRP LYS MET GLN SEQRES 9 A 510 PRO SER ASN GLN THR GLU ALA ASP ASN ARG SER PHE ILE SEQRES 10 A 510 PHE TYR GLU ASN LEU LEU LEU GLY VAL PRO ARG ILE ARG SEQRES 11 A 510 GLN LEU ARG VAL ARG ASN GLY SER CYS SER ILE PRO GLN SEQRES 12 A 510 ASP LEU ARG ASP GLU ILE LYS GLU CYS TYR ASP VAL TYR SEQRES 13 A 510 SER VAL SER SER GLU ASP ARG ALA PRO PHE GLY PRO ARG SEQRES 14 A 510 ASN GLY THR ALA TRP ILE TYR THR SER GLU LYS ASP LEU SEQRES 15 A 510 ASN GLY SER SER HIS TRP GLY ILE ILE ALA THR TYR SER SEQRES 16 A 510 GLY ALA GLY TYR TYR LEU ASP LEU SER ARG THR ARG GLU SEQRES 17 A 510 GLU THR ALA ALA GLN VAL ALA SER LEU LYS LYS ASN VAL SEQRES 18 A 510 TRP LEU ASP ARG GLY THR ARG ALA THR PHE ILE ASP PHE SEQRES 19 A 510 SER VAL TYR ASN ALA ASN ILE ASN LEU PHE CYS VAL VAL SEQRES 20 A 510 ARG LEU LEU VAL GLU PHE PRO ALA THR GLY GLY VAL ILE SEQRES 21 A 510 PRO SER TRP GLN PHE GLN PRO LEU LYS LEU ILE ARG TYR SEQRES 22 A 510 VAL THR THR PHE ASP PHE PHE LEU ALA ALA CYS GLU ILE SEQRES 23 A 510 ILE PHE CYS PHE PHE ILE PHE TYR TYR VAL VAL GLU GLU SEQRES 24 A 510 ILE LEU GLU ILE ARG ILE HIS LYS LEU HIS TYR PHE ARG SEQRES 25 A 510 SER PHE TRP ASN CYS LEU ASP VAL VAL ILE VAL VAL LEU SEQRES 26 A 510 SER VAL VAL ALA ILE GLY ILE ASN ILE TYR ARG THR SER SEQRES 27 A 510 ASN VAL GLU VAL LEU LEU GLN PHE LEU GLU ASP GLN ASN SEQRES 28 A 510 THR PHE PRO ASN PHE GLU HIS LEU ALA TYR TRP GLN ILE SEQRES 29 A 510 GLN PHE ASN ASN ILE ALA ALA VAL THR VAL PHE PHE VAL SEQRES 30 A 510 TRP ILE LYS LEU PHE LYS PHE ILE ASN PHE ASN ARG THR SEQRES 31 A 510 MET SER GLN LEU SER THR THR MET SER ARG CYS ALA LYS SEQRES 32 A 510 ASP LEU PHE GLY PHE ALA ILE MET PHE PHE ILE ILE PHE SEQRES 33 A 510 LEU ALA TYR ALA GLN LEU ALA TYR LEU VAL PHE GLY THR SEQRES 34 A 510 GLN VAL ASP ASP PHE SER THR PHE GLN GLU CYS ILE PHE SEQRES 35 A 510 THR GLN PHE ARG ILE ILE LEU GLY ASP ILE ASN PHE ALA SEQRES 36 A 510 GLU ILE GLU GLU ALA ASN ARG VAL LEU GLY PRO ILE TYR SEQRES 37 A 510 PHE THR THR PHE VAL PHE PHE MET PHE PHE ILE LEU LEU SEQRES 38 A 510 ASN MET PHE LEU ALA ILE ILE ASN ASP THR TYR SER GLU SEQRES 39 A 510 VAL LYS SER ASP LEU ALA GLN GLN LYS ALA GLU MET GLU SEQRES 40 A 510 LEU SER ASP SEQRES 1 B 510 GLY ALA MET GLY SER ARG GLY LEU TRP GLY THR ARG LEU SEQRES 2 B 510 MET GLU GLU SER SER THR ASN ARG GLU LYS TYR LEU LYS SEQRES 3 B 510 SER VAL LEU ARG GLU LEU VAL THR TYR LEU LEU PHE LEU SEQRES 4 B 510 ILE VAL LEU CYS ILE LEU THR TYR GLY MET MET SER SER SEQRES 5 B 510 ASN VAL TYR TYR TYR THR ARG MET MET SER GLN LEU PHE SEQRES 6 B 510 LEU ASP THR PRO VAL SER LYS THR GLU LYS THR ASN PHE SEQRES 7 B 510 LYS THR LEU SER SER MET GLU ASP PHE TRP LYS PHE THR SEQRES 8 B 510 GLU GLY SER LEU LEU ASP GLY LEU TYR TRP LYS MET GLN SEQRES 9 B 510 PRO SER ASN GLN THR GLU ALA ASP ASN ARG SER PHE ILE SEQRES 10 B 510 PHE TYR GLU ASN LEU LEU LEU GLY VAL PRO ARG ILE ARG SEQRES 11 B 510 GLN LEU ARG VAL ARG ASN GLY SER CYS SER ILE PRO GLN SEQRES 12 B 510 ASP LEU ARG ASP GLU ILE LYS GLU CYS TYR ASP VAL TYR SEQRES 13 B 510 SER VAL SER SER GLU ASP ARG ALA PRO PHE GLY PRO ARG SEQRES 14 B 510 ASN GLY THR ALA TRP ILE TYR THR SER GLU LYS ASP LEU SEQRES 15 B 510 ASN GLY SER SER HIS TRP GLY ILE ILE ALA THR TYR SER SEQRES 16 B 510 GLY ALA GLY TYR TYR LEU ASP LEU SER ARG THR ARG GLU SEQRES 17 B 510 GLU THR ALA ALA GLN VAL ALA SER LEU LYS LYS ASN VAL SEQRES 18 B 510 TRP LEU ASP ARG GLY THR ARG ALA THR PHE ILE ASP PHE SEQRES 19 B 510 SER VAL TYR ASN ALA ASN ILE ASN LEU PHE CYS VAL VAL SEQRES 20 B 510 ARG LEU LEU VAL GLU PHE PRO ALA THR GLY GLY VAL ILE SEQRES 21 B 510 PRO SER TRP GLN PHE GLN PRO LEU LYS LEU ILE ARG TYR SEQRES 22 B 510 VAL THR THR PHE ASP PHE PHE LEU ALA ALA CYS GLU ILE SEQRES 23 B 510 ILE PHE CYS PHE PHE ILE PHE TYR TYR VAL VAL GLU GLU SEQRES 24 B 510 ILE LEU GLU ILE ARG ILE HIS LYS LEU HIS TYR PHE ARG SEQRES 25 B 510 SER PHE TRP ASN CYS LEU ASP VAL VAL ILE VAL VAL LEU SEQRES 26 B 510 SER VAL VAL ALA ILE GLY ILE ASN ILE TYR ARG THR SER SEQRES 27 B 510 ASN VAL GLU VAL LEU LEU GLN PHE LEU GLU ASP GLN ASN SEQRES 28 B 510 THR PHE PRO ASN PHE GLU HIS LEU ALA TYR TRP GLN ILE SEQRES 29 B 510 GLN PHE ASN ASN ILE ALA ALA VAL THR VAL PHE PHE VAL SEQRES 30 B 510 TRP ILE LYS LEU PHE LYS PHE ILE ASN PHE ASN ARG THR SEQRES 31 B 510 MET SER GLN LEU SER THR THR MET SER ARG CYS ALA LYS SEQRES 32 B 510 ASP LEU PHE GLY PHE ALA ILE MET PHE PHE ILE ILE PHE SEQRES 33 B 510 LEU ALA TYR ALA GLN LEU ALA TYR LEU VAL PHE GLY THR SEQRES 34 B 510 GLN VAL ASP ASP PHE SER THR PHE GLN GLU CYS ILE PHE SEQRES 35 B 510 THR GLN PHE ARG ILE ILE LEU GLY ASP ILE ASN PHE ALA SEQRES 36 B 510 GLU ILE GLU GLU ALA ASN ARG VAL LEU GLY PRO ILE TYR SEQRES 37 B 510 PHE THR THR PHE VAL PHE PHE MET PHE PHE ILE LEU LEU SEQRES 38 B 510 ASN MET PHE LEU ALA ILE ILE ASN ASP THR TYR SER GLU SEQRES 39 B 510 VAL LYS SER ASP LEU ALA GLN GLN LYS ALA GLU MET GLU SEQRES 40 B 510 LEU SER ASP SEQRES 1 C 510 GLY ALA MET GLY SER ARG GLY LEU TRP GLY THR ARG LEU SEQRES 2 C 510 MET GLU GLU SER SER THR ASN ARG GLU LYS TYR LEU LYS SEQRES 3 C 510 SER VAL LEU ARG GLU LEU VAL THR TYR LEU LEU PHE LEU SEQRES 4 C 510 ILE VAL LEU CYS ILE LEU THR TYR GLY MET MET SER SER SEQRES 5 C 510 ASN VAL TYR TYR TYR THR ARG MET MET SER GLN LEU PHE SEQRES 6 C 510 LEU ASP THR PRO VAL SER LYS THR GLU LYS THR ASN PHE SEQRES 7 C 510 LYS THR LEU SER SER MET GLU ASP PHE TRP LYS PHE THR SEQRES 8 C 510 GLU GLY SER LEU LEU ASP GLY LEU TYR TRP LYS MET GLN SEQRES 9 C 510 PRO SER ASN GLN THR GLU ALA ASP ASN ARG SER PHE ILE SEQRES 10 C 510 PHE TYR GLU ASN LEU LEU LEU GLY VAL PRO ARG ILE ARG SEQRES 11 C 510 GLN LEU ARG VAL ARG ASN GLY SER CYS SER ILE PRO GLN SEQRES 12 C 510 ASP LEU ARG ASP GLU ILE LYS GLU CYS TYR ASP VAL TYR SEQRES 13 C 510 SER VAL SER SER GLU ASP ARG ALA PRO PHE GLY PRO ARG SEQRES 14 C 510 ASN GLY THR ALA TRP ILE TYR THR SER GLU LYS ASP LEU SEQRES 15 C 510 ASN GLY SER SER HIS TRP GLY ILE ILE ALA THR TYR SER SEQRES 16 C 510 GLY ALA GLY TYR TYR LEU ASP LEU SER ARG THR ARG GLU SEQRES 17 C 510 GLU THR ALA ALA GLN VAL ALA SER LEU LYS LYS ASN VAL SEQRES 18 C 510 TRP LEU ASP ARG GLY THR ARG ALA THR PHE ILE ASP PHE SEQRES 19 C 510 SER VAL TYR ASN ALA ASN ILE ASN LEU PHE CYS VAL VAL SEQRES 20 C 510 ARG LEU LEU VAL GLU PHE PRO ALA THR GLY GLY VAL ILE SEQRES 21 C 510 PRO SER TRP GLN PHE GLN PRO LEU LYS LEU ILE ARG TYR SEQRES 22 C 510 VAL THR THR PHE ASP PHE PHE LEU ALA ALA CYS GLU ILE SEQRES 23 C 510 ILE PHE CYS PHE PHE ILE PHE TYR TYR VAL VAL GLU GLU SEQRES 24 C 510 ILE LEU GLU ILE ARG ILE HIS LYS LEU HIS TYR PHE ARG SEQRES 25 C 510 SER PHE TRP ASN CYS LEU ASP VAL VAL ILE VAL VAL LEU SEQRES 26 C 510 SER VAL VAL ALA ILE GLY ILE ASN ILE TYR ARG THR SER SEQRES 27 C 510 ASN VAL GLU VAL LEU LEU GLN PHE LEU GLU ASP GLN ASN SEQRES 28 C 510 THR PHE PRO ASN PHE GLU HIS LEU ALA TYR TRP GLN ILE SEQRES 29 C 510 GLN PHE ASN ASN ILE ALA ALA VAL THR VAL PHE PHE VAL SEQRES 30 C 510 TRP ILE LYS LEU PHE LYS PHE ILE ASN PHE ASN ARG THR SEQRES 31 C 510 MET SER GLN LEU SER THR THR MET SER ARG CYS ALA LYS SEQRES 32 C 510 ASP LEU PHE GLY PHE ALA ILE MET PHE PHE ILE ILE PHE SEQRES 33 C 510 LEU ALA TYR ALA GLN LEU ALA TYR LEU VAL PHE GLY THR SEQRES 34 C 510 GLN VAL ASP ASP PHE SER THR PHE GLN GLU CYS ILE PHE SEQRES 35 C 510 THR GLN PHE ARG ILE ILE LEU GLY ASP ILE ASN PHE ALA SEQRES 36 C 510 GLU ILE GLU GLU ALA ASN ARG VAL LEU GLY PRO ILE TYR SEQRES 37 C 510 PHE THR THR PHE VAL PHE PHE MET PHE PHE ILE LEU LEU SEQRES 38 C 510 ASN MET PHE LEU ALA ILE ILE ASN ASP THR TYR SER GLU SEQRES 39 C 510 VAL LYS SER ASP LEU ALA GLN GLN LYS ALA GLU MET GLU SEQRES 40 C 510 LEU SER ASP SEQRES 1 D 510 GLY ALA MET GLY SER ARG GLY LEU TRP GLY THR ARG LEU SEQRES 2 D 510 MET GLU GLU SER SER THR ASN ARG GLU LYS TYR LEU LYS SEQRES 3 D 510 SER VAL LEU ARG GLU LEU VAL THR TYR LEU LEU PHE LEU SEQRES 4 D 510 ILE VAL LEU CYS ILE LEU THR TYR GLY MET MET SER SER SEQRES 5 D 510 ASN VAL TYR TYR TYR THR ARG MET MET SER GLN LEU PHE SEQRES 6 D 510 LEU ASP THR PRO VAL SER LYS THR GLU LYS THR ASN PHE SEQRES 7 D 510 LYS THR LEU SER SER MET GLU ASP PHE TRP LYS PHE THR SEQRES 8 D 510 GLU GLY SER LEU LEU ASP GLY LEU TYR TRP LYS MET GLN SEQRES 9 D 510 PRO SER ASN GLN THR GLU ALA ASP ASN ARG SER PHE ILE SEQRES 10 D 510 PHE TYR GLU ASN LEU LEU LEU GLY VAL PRO ARG ILE ARG SEQRES 11 D 510 GLN LEU ARG VAL ARG ASN GLY SER CYS SER ILE PRO GLN SEQRES 12 D 510 ASP LEU ARG ASP GLU ILE LYS GLU CYS TYR ASP VAL TYR SEQRES 13 D 510 SER VAL SER SER GLU ASP ARG ALA PRO PHE GLY PRO ARG SEQRES 14 D 510 ASN GLY THR ALA TRP ILE TYR THR SER GLU LYS ASP LEU SEQRES 15 D 510 ASN GLY SER SER HIS TRP GLY ILE ILE ALA THR TYR SER SEQRES 16 D 510 GLY ALA GLY TYR TYR LEU ASP LEU SER ARG THR ARG GLU SEQRES 17 D 510 GLU THR ALA ALA GLN VAL ALA SER LEU LYS LYS ASN VAL SEQRES 18 D 510 TRP LEU ASP ARG GLY THR ARG ALA THR PHE ILE ASP PHE SEQRES 19 D 510 SER VAL TYR ASN ALA ASN ILE ASN LEU PHE CYS VAL VAL SEQRES 20 D 510 ARG LEU LEU VAL GLU PHE PRO ALA THR GLY GLY VAL ILE SEQRES 21 D 510 PRO SER TRP GLN PHE GLN PRO LEU LYS LEU ILE ARG TYR SEQRES 22 D 510 VAL THR THR PHE ASP PHE PHE LEU ALA ALA CYS GLU ILE SEQRES 23 D 510 ILE PHE CYS PHE PHE ILE PHE TYR TYR VAL VAL GLU GLU SEQRES 24 D 510 ILE LEU GLU ILE ARG ILE HIS LYS LEU HIS TYR PHE ARG SEQRES 25 D 510 SER PHE TRP ASN CYS LEU ASP VAL VAL ILE VAL VAL LEU SEQRES 26 D 510 SER VAL VAL ALA ILE GLY ILE ASN ILE TYR ARG THR SER SEQRES 27 D 510 ASN VAL GLU VAL LEU LEU GLN PHE LEU GLU ASP GLN ASN SEQRES 28 D 510 THR PHE PRO ASN PHE GLU HIS LEU ALA TYR TRP GLN ILE SEQRES 29 D 510 GLN PHE ASN ASN ILE ALA ALA VAL THR VAL PHE PHE VAL SEQRES 30 D 510 TRP ILE LYS LEU PHE LYS PHE ILE ASN PHE ASN ARG THR SEQRES 31 D 510 MET SER GLN LEU SER THR THR MET SER ARG CYS ALA LYS SEQRES 32 D 510 ASP LEU PHE GLY PHE ALA ILE MET PHE PHE ILE ILE PHE SEQRES 33 D 510 LEU ALA TYR ALA GLN LEU ALA TYR LEU VAL PHE GLY THR SEQRES 34 D 510 GLN VAL ASP ASP PHE SER THR PHE GLN GLU CYS ILE PHE SEQRES 35 D 510 THR GLN PHE ARG ILE ILE LEU GLY ASP ILE ASN PHE ALA SEQRES 36 D 510 GLU ILE GLU GLU ALA ASN ARG VAL LEU GLY PRO ILE TYR SEQRES 37 D 510 PHE THR THR PHE VAL PHE PHE MET PHE PHE ILE LEU LEU SEQRES 38 D 510 ASN MET PHE LEU ALA ILE ILE ASN ASP THR TYR SER GLU SEQRES 39 D 510 VAL LYS SER ASP LEU ALA GLN GLN LYS ALA GLU MET GLU SEQRES 40 D 510 LEU SER ASP HET NAG A 801 14 HET NAG A 802 14 HET NAG A 803 14 HET NAG B 801 14 HET NAG B 802 14 HET NAG B 803 14 HET NAG C 801 14 HET NAG C 802 14 HET NAG C 803 14 HET NAG D 801 14 HET NAG D 802 14 HET NAG D 803 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE FORMUL 5 NAG 12(C8 H15 N O6) HELIX 1 AA1 TYR A 216 MET A 242 1 27 HELIX 2 AA2 ASN A 245 LEU A 258 1 14 HELIX 3 AA3 SER A 275 GLU A 284 1 10 HELIX 4 AA4 GLY A 285 TYR A 292 1 8 HELIX 5 AA5 ARG A 327 CYS A 331 5 5 HELIX 6 AA6 PRO A 334 ARG A 338 5 5 HELIX 7 AA7 THR A 398 ASN A 412 1 15 HELIX 8 AA8 THR A 467 ILE A 492 1 26 HELIX 9 AA9 SER A 505 ARG A 528 1 24 HELIX 10 AB1 VAL A 532 ASP A 541 1 10 HELIX 11 AB2 PHE A 548 LYS A 572 1 25 HELIX 12 AB3 LEU A 573 PHE A 579 5 7 HELIX 13 AB4 ASN A 580 PHE A 619 1 40 HELIX 14 AB5 VAL A 623 SER A 627 5 5 HELIX 15 AB6 THR A 628 GLY A 642 1 15 HELIX 16 AB7 PHE A 646 ASN A 653 1 8 HELIX 17 AB8 VAL A 655 PHE A 670 1 16 HELIX 18 AB9 LEU A 672 GLN A 693 1 22 HELIX 19 AC1 LEU B 217 MET B 242 1 26 HELIX 20 AC2 ASN B 245 LEU B 258 1 14 HELIX 21 AC3 SER B 275 GLU B 284 1 10 HELIX 22 AC4 GLY B 285 TYR B 292 1 8 HELIX 23 AC5 ARG B 327 CYS B 331 5 5 HELIX 24 AC6 PRO B 334 ARG B 338 5 5 HELIX 25 AC7 THR B 398 ASN B 412 1 15 HELIX 26 AC8 THR B 467 ILE B 492 1 26 HELIX 27 AC9 SER B 505 ARG B 528 1 24 HELIX 28 AD1 VAL B 532 ASP B 541 1 10 HELIX 29 AD2 PHE B 548 LYS B 572 1 25 HELIX 30 AD3 LEU B 573 PHE B 579 5 7 HELIX 31 AD4 ASN B 580 PHE B 619 1 40 HELIX 32 AD5 VAL B 623 SER B 627 5 5 HELIX 33 AD6 THR B 628 GLY B 642 1 15 HELIX 34 AD7 PHE B 646 ASN B 653 1 8 HELIX 35 AD8 VAL B 655 PHE B 670 1 16 HELIX 36 AD9 LEU B 672 GLN B 693 1 22 HELIX 37 AE1 LEU C 217 MET C 242 1 26 HELIX 38 AE2 ASN C 245 LEU C 258 1 14 HELIX 39 AE3 SER C 275 GLU C 284 1 10 HELIX 40 AE4 GLY C 285 TYR C 292 1 8 HELIX 41 AE5 ARG C 327 CYS C 331 5 5 HELIX 42 AE6 PRO C 334 ARG C 338 5 5 HELIX 43 AE7 THR C 398 ASN C 412 1 15 HELIX 44 AE8 THR C 467 ILE C 492 1 26 HELIX 45 AE9 SER C 505 ARG C 528 1 24 HELIX 46 AF1 VAL C 532 ASP C 541 1 10 HELIX 47 AF2 PHE C 548 LYS C 572 1 25 HELIX 48 AF3 LEU C 573 PHE C 579 5 7 HELIX 49 AF4 ASN C 580 PHE C 619 1 40 HELIX 50 AF5 VAL C 623 SER C 627 5 5 HELIX 51 AF6 THR C 628 GLY C 642 1 15 HELIX 52 AF7 PHE C 646 ASN C 653 1 8 HELIX 53 AF8 VAL C 655 PHE C 670 1 16 HELIX 54 AF9 LEU C 672 GLN C 693 1 22 HELIX 55 AG1 LEU D 217 MET D 242 1 26 HELIX 56 AG2 ASN D 245 LEU D 258 1 14 HELIX 57 AG3 SER D 275 GLU D 284 1 10 HELIX 58 AG4 GLY D 285 TYR D 292 1 8 HELIX 59 AG5 ARG D 327 CYS D 331 5 5 HELIX 60 AG6 PRO D 334 ARG D 338 5 5 HELIX 61 AG7 THR D 398 ASN D 412 1 15 HELIX 62 AG8 THR D 467 ILE D 492 1 26 HELIX 63 AG9 SER D 505 ARG D 528 1 24 HELIX 64 AH1 VAL D 532 ASP D 541 1 10 HELIX 65 AH2 PHE D 548 LYS D 572 1 25 HELIX 66 AH3 LEU D 573 PHE D 579 5 7 HELIX 67 AH4 ASN D 580 PHE D 619 1 40 HELIX 68 AH5 VAL D 623 SER D 627 5 5 HELIX 69 AH6 THR D 628 GLY D 642 1 15 HELIX 70 AH7 PHE D 646 ASN D 653 1 8 HELIX 71 AH8 VAL D 655 PHE D 670 1 16 HELIX 72 AH9 LEU D 672 GLN D 693 1 22 SHEET 1 AA1 3 PHE A 308 ILE A 309 0 SHEET 2 AA1 3 ASN A 313 ARG A 325 -1 O ASN A 313 N ILE A 309 SHEET 3 AA1 3 TYR A 391 ASP A 394 -1 O TYR A 391 N GLN A 323 SHEET 1 AA2 5 PHE A 308 ILE A 309 0 SHEET 2 AA2 5 ASN A 313 ARG A 325 -1 O ASN A 313 N ILE A 309 SHEET 3 AA2 5 THR A 419 ASN A 430 -1 O PHE A 423 N ARG A 322 SHEET 4 AA2 5 LEU A 435 GLU A 444 -1 O CYS A 437 N VAL A 428 SHEET 5 AA2 5 ILE A 452 LEU A 460 -1 O GLN A 458 N VAL A 438 SHEET 1 AA3 2 HIS A 379 TRP A 380 0 SHEET 2 AA3 2 THR A 385 TYR A 386 -1 O TYR A 386 N HIS A 379 SHEET 1 AA4 3 PHE B 308 ILE B 309 0 SHEET 2 AA4 3 ASN B 313 ARG B 325 -1 O ASN B 313 N ILE B 309 SHEET 3 AA4 3 TYR B 391 ASP B 394 -1 O TYR B 391 N GLN B 323 SHEET 1 AA5 5 PHE B 308 ILE B 309 0 SHEET 2 AA5 5 ASN B 313 ARG B 325 -1 O ASN B 313 N ILE B 309 SHEET 3 AA5 5 THR B 419 ASN B 430 -1 O PHE B 423 N ARG B 322 SHEET 4 AA5 5 LEU B 435 GLU B 444 -1 O CYS B 437 N VAL B 428 SHEET 5 AA5 5 ILE B 452 LEU B 460 -1 O GLN B 458 N VAL B 438 SHEET 1 AA6 2 HIS B 379 TRP B 380 0 SHEET 2 AA6 2 THR B 385 TYR B 386 -1 O TYR B 386 N HIS B 379 SHEET 1 AA7 3 PHE C 308 ILE C 309 0 SHEET 2 AA7 3 ASN C 313 ARG C 325 -1 O ASN C 313 N ILE C 309 SHEET 3 AA7 3 TYR C 391 ASP C 394 -1 O TYR C 391 N GLN C 323 SHEET 1 AA8 5 PHE C 308 ILE C 309 0 SHEET 2 AA8 5 ASN C 313 ARG C 325 -1 O ASN C 313 N ILE C 309 SHEET 3 AA8 5 THR C 419 ASN C 430 -1 O PHE C 423 N ARG C 322 SHEET 4 AA8 5 LEU C 435 GLU C 444 -1 O CYS C 437 N VAL C 428 SHEET 5 AA8 5 ILE C 452 LEU C 460 -1 O GLN C 458 N VAL C 438 SHEET 1 AA9 2 HIS C 379 TRP C 380 0 SHEET 2 AA9 2 THR C 385 TYR C 386 -1 O TYR C 386 N HIS C 379 SHEET 1 AB1 3 PHE D 308 ILE D 309 0 SHEET 2 AB1 3 ASN D 313 ARG D 325 -1 O ASN D 313 N ILE D 309 SHEET 3 AB1 3 TYR D 391 ASP D 394 -1 O TYR D 391 N GLN D 323 SHEET 1 AB2 5 PHE D 308 ILE D 309 0 SHEET 2 AB2 5 ASN D 313 ARG D 325 -1 O ASN D 313 N ILE D 309 SHEET 3 AB2 5 THR D 419 ASN D 430 -1 O PHE D 423 N ARG D 322 SHEET 4 AB2 5 LEU D 435 GLU D 444 -1 O CYS D 437 N VAL D 428 SHEET 5 AB2 5 ILE D 452 LEU D 460 -1 O GLN D 458 N VAL D 438 SHEET 1 AB3 2 HIS D 379 TRP D 380 0 SHEET 2 AB3 2 THR D 385 TYR D 386 -1 O TYR D 386 N HIS D 379 SSBOND 1 CYS A 331 CYS A 344 1555 1555 2.03 SSBOND 2 CYS B 331 CYS B 344 1555 1555 2.03 SSBOND 3 CYS C 331 CYS C 344 1555 1555 2.03 SSBOND 4 CYS D 331 CYS D 344 1555 1555 2.03 LINK ND2 ASN A 328 C1 NAG A 801 1555 1555 1.43 LINK ND2 ASN A 362 C1 NAG A 802 1555 1555 1.45 LINK ND2 ASN A 375 C1 NAG A 803 1555 1555 1.43 LINK ND2 ASN B 328 C1 NAG B 801 1555 1555 1.43 LINK ND2 ASN B 362 C1 NAG B 802 1555 1555 1.44 LINK ND2 ASN B 375 C1 NAG B 803 1555 1555 1.43 LINK ND2 ASN C 328 C1 NAG C 801 1555 1555 1.43 LINK ND2 ASN C 362 C1 NAG C 802 1555 1555 1.45 LINK ND2 ASN C 375 C1 NAG C 803 1555 1555 1.44 LINK ND2 ASN D 328 C1 NAG D 801 1555 1555 1.43 LINK ND2 ASN D 362 C1 NAG D 802 1555 1555 1.45 LINK ND2 ASN D 375 C1 NAG D 803 1555 1555 1.43 CISPEP 1 LYS A 294 MET A 295 0 0.21 CISPEP 2 ALA A 303 ASP A 304 0 1.98 CISPEP 3 ARG A 504 SER A 505 0 -5.06 CISPEP 4 LYS B 294 MET B 295 0 0.18 CISPEP 5 ALA B 303 ASP B 304 0 2.06 CISPEP 6 ARG B 504 SER B 505 0 -5.05 CISPEP 7 LYS C 294 MET C 295 0 0.19 CISPEP 8 ALA C 303 ASP C 304 0 2.02 CISPEP 9 ARG C 504 SER C 505 0 -5.11 CISPEP 10 LYS D 294 MET D 295 0 0.30 CISPEP 11 ALA D 303 ASP D 304 0 1.98 CISPEP 12 ARG D 504 SER D 505 0 -5.05 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000