HEADER TRANSLATION 02-SEP-16 5T79 TITLE X-RAY CRYSTAL STRUCTURE OF A NOVEL ALDO-KETO REDUCTASES FOR THE TITLE 2 BIOCATALYTIC CONVERSION OF 3-HYDROXYBUTANAL TO 1,3-BUTANEDIOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALDO-KETO REDUCTASE, OXIDOREDUCTASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM (STRAIN LT2 / SGSC1412 / SOURCE 3 ATCC 700720); SOURCE 4 ORGANISM_TAXID: 99287; SOURCE 5 STRAIN: LT2 / SGSC1412 / ATCC 700720; SOURCE 6 GENE: STM2406; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIPL; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: P15TVLIC KEYWDS CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, CSGID, NIAID, KEYWDS 2 NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES, NADP- KEYWDS 3 DEPENDENT OXIDOREDUCTASE, TRANSLATION EXPDTA X-RAY DIFFRACTION AUTHOR J.S.BRUNZELLE,Z.WAWRZAK,E.EVDOKIMOVA,M.KUDRITSKA,A.SAVCHENKO, AUTHOR 2 A.F.YAKUNIN,W.F.ANDERSON,CENTER FOR STRUCTURAL GENOMICS OF AUTHOR 3 INFECTIOUS DISEASES (CSGID) REVDAT 2 04-OCT-23 5T79 1 REMARK REVDAT 1 15-FEB-17 5T79 0 JRNL AUTH T.KIM,R.FLICK,J.BRUNZELLE,A.SINGER,E.EVDOKIMOVA,G.BROWN, JRNL AUTH 2 J.C.JOO,G.A.MINASOV,W.F.ANDERSON,R.MAHADEVAN,A.SAVCHENKO, JRNL AUTH 3 A.F.YAKUNIN JRNL TITL STRUCTURAL AND BIOCHEMICAL STUDIES OF NOVEL ALDO-KETO JRNL TITL 2 REDUCTASES FOR THE BIOCATALYTIC CONVERSION OF JRNL TITL 3 3-HYDROXYBUTANAL TO 1,3-BUTANEDIOL. JRNL REF APPL. ENVIRON. MICROBIOL. 2017 JRNL REFN ESSN 1098-5336 JRNL PMID 28130301 JRNL DOI 10.1128/AEM.03172-16 REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 34852 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.740 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 17 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.92 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.15 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2681 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2570 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2527 REMARK 3 BIN R VALUE (WORKING SET) : 0.2570 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.74 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 154 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2499 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 59 REMARK 3 SOLVENT ATOMS : 448 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.73 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.21260 REMARK 3 B22 (A**2) : 0.21260 REMARK 3 B33 (A**2) : -0.42520 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.180 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.132 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.117 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.115 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.108 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2761 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3790 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1290 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 68 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 431 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2761 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 340 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3496 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.95 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.85 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.74 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|1 - A|8} REMARK 3 ORIGIN FOR THE GROUP (A): 97.5885 60.6890 96.3062 REMARK 3 T TENSOR REMARK 3 T11: 0.0364 T22: 0.0302 REMARK 3 T33: 0.0390 T12: -0.0301 REMARK 3 T13: -0.0650 T23: -0.0506 REMARK 3 L TENSOR REMARK 3 L11: 4.1580 L22: 5.1865 REMARK 3 L33: 3.2594 L12: -1.1093 REMARK 3 L13: 5.5573 L23: 3.3275 REMARK 3 S TENSOR REMARK 3 S11: -0.0805 S12: 0.6798 S13: -0.3128 REMARK 3 S21: -0.1365 S22: -0.1074 S23: 0.4284 REMARK 3 S31: 0.1384 S32: 0.0540 S33: 0.1879 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|9 - A|75} REMARK 3 ORIGIN FOR THE GROUP (A): 108.2710 67.7621 106.6660 REMARK 3 T TENSOR REMARK 3 T11: -0.0123 T22: -0.0579 REMARK 3 T33: -0.0426 T12: 0.0256 REMARK 3 T13: -0.0151 T23: 0.0111 REMARK 3 L TENSOR REMARK 3 L11: 1.2317 L22: 0.5748 REMARK 3 L33: 1.1049 L12: -0.0246 REMARK 3 L13: -0.4211 L23: 0.0041 REMARK 3 S TENSOR REMARK 3 S11: -0.0032 S12: 0.0073 S13: -0.0931 REMARK 3 S21: -0.0381 S22: -0.0032 S23: 0.0031 REMARK 3 S31: 0.1380 S32: 0.0432 S33: 0.0065 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {A|76 - A|84} REMARK 3 ORIGIN FOR THE GROUP (A): 105.9120 73.4869 95.4434 REMARK 3 T TENSOR REMARK 3 T11: 0.0491 T22: 0.0613 REMARK 3 T33: -0.0137 T12: 0.0403 REMARK 3 T13: 0.0179 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 2.1290 L22: 2.0271 REMARK 3 L33: 0.5596 L12: 3.7650 REMARK 3 L13: 0.6964 L23: -0.0919 REMARK 3 S TENSOR REMARK 3 S11: 0.0623 S12: 0.0361 S13: 0.0277 REMARK 3 S21: -0.0522 S22: -0.0554 S23: 0.0833 REMARK 3 S31: 0.0316 S32: -0.1837 S33: -0.0069 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {A|85 - A|142} REMARK 3 ORIGIN FOR THE GROUP (A): 109.6820 82.5806 109.0320 REMARK 3 T TENSOR REMARK 3 T11: 0.0106 T22: -0.0009 REMARK 3 T33: 0.0065 T12: 0.0156 REMARK 3 T13: -0.0061 T23: 0.0237 REMARK 3 L TENSOR REMARK 3 L11: 0.6896 L22: 0.9241 REMARK 3 L33: 0.4092 L12: 0.3230 REMARK 3 L13: -0.0409 L23: 0.2093 REMARK 3 S TENSOR REMARK 3 S11: 0.0318 S12: -0.0066 S13: 0.0498 REMARK 3 S21: 0.0010 S22: -0.0145 S23: -0.0318 REMARK 3 S31: -0.0314 S32: -0.0446 S33: -0.0173 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: {A|143 - A|151} REMARK 3 ORIGIN FOR THE GROUP (A): 113.7050 90.6210 123.8210 REMARK 3 T TENSOR REMARK 3 T11: 0.0106 T22: -0.0504 REMARK 3 T33: -0.0767 T12: -0.0094 REMARK 3 T13: -0.0101 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 1.0680 L22: 4.2075 REMARK 3 L33: 1.6982 L12: -1.5858 REMARK 3 L13: 1.4208 L23: -0.5073 REMARK 3 S TENSOR REMARK 3 S11: 0.0399 S12: 0.0035 S13: 0.0216 REMARK 3 S21: 0.4499 S22: -0.0173 S23: -0.2500 REMARK 3 S31: -0.0778 S32: 0.0272 S33: -0.0226 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: {A|152 - A|185} REMARK 3 ORIGIN FOR THE GROUP (A): 106.4470 83.2281 122.9360 REMARK 3 T TENSOR REMARK 3 T11: -0.0198 T22: -0.0555 REMARK 3 T33: -0.0764 T12: -0.0072 REMARK 3 T13: 0.0065 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 2.0435 L22: 1.7740 REMARK 3 L33: 1.7738 L12: -0.3854 REMARK 3 L13: 0.4373 L23: -0.6369 REMARK 3 S TENSOR REMARK 3 S11: 0.0159 S12: -0.1827 S13: 0.1120 REMARK 3 S21: 0.2470 S22: 0.0116 S23: 0.0747 REMARK 3 S31: -0.1442 S32: -0.0262 S33: -0.0275 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: {A|186 - A|230} REMARK 3 ORIGIN FOR THE GROUP (A): 114.0220 68.1423 123.2630 REMARK 3 T TENSOR REMARK 3 T11: -0.0510 T22: -0.0599 REMARK 3 T33: -0.0853 T12: 0.0056 REMARK 3 T13: -0.0160 T23: 0.0494 REMARK 3 L TENSOR REMARK 3 L11: 1.5835 L22: 2.7679 REMARK 3 L33: 0.4755 L12: -0.7122 REMARK 3 L13: -0.4580 L23: 0.5565 REMARK 3 S TENSOR REMARK 3 S11: 0.0032 S12: -0.1764 S13: -0.0967 REMARK 3 S21: 0.0943 S22: -0.0015 S23: -0.1868 REMARK 3 S31: 0.0036 S32: 0.0202 S33: -0.0017 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: {A|231 - A|255} REMARK 3 ORIGIN FOR THE GROUP (A): 131.4150 58.9998 110.4210 REMARK 3 T TENSOR REMARK 3 T11: 0.0705 T22: 0.0907 REMARK 3 T33: 0.1875 T12: 0.0154 REMARK 3 T13: -0.0056 T23: 0.0612 REMARK 3 L TENSOR REMARK 3 L11: 1.9908 L22: 0.0000 REMARK 3 L33: 4.8414 L12: -1.7485 REMARK 3 L13: -4.4755 L23: 5.4289 REMARK 3 S TENSOR REMARK 3 S11: 0.0028 S12: 0.2288 S13: -0.1266 REMARK 3 S21: -0.1823 S22: -0.0693 S23: 0.0005 REMARK 3 S31: -0.0012 S32: 0.1873 S33: 0.0666 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: {A|256 - A|265} REMARK 3 ORIGIN FOR THE GROUP (A): 131.5400 54.0831 119.7660 REMARK 3 T TENSOR REMARK 3 T11: -0.0239 T22: -0.0127 REMARK 3 T33: 0.2245 T12: 0.0067 REMARK 3 T13: 0.0151 T23: 0.0701 REMARK 3 L TENSOR REMARK 3 L11: 3.9037 L22: 0.4390 REMARK 3 L33: 0.0000 L12: 0.5330 REMARK 3 L13: 0.9024 L23: -0.5824 REMARK 3 S TENSOR REMARK 3 S11: 0.0225 S12: -0.1452 S13: -0.2393 REMARK 3 S21: -0.0002 S22: 0.0074 S23: -0.0618 REMARK 3 S31: -0.1713 S32: 0.3852 S33: -0.0298 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: {A|266 - A|297} REMARK 3 ORIGIN FOR THE GROUP (A): 114.6950 54.7836 118.9800 REMARK 3 T TENSOR REMARK 3 T11: -0.0775 T22: -0.1201 REMARK 3 T33: 0.0073 T12: 0.0029 REMARK 3 T13: -0.0076 T23: 0.0791 REMARK 3 L TENSOR REMARK 3 L11: 1.5494 L22: 1.6992 REMARK 3 L33: 1.3844 L12: -0.3652 REMARK 3 L13: -0.1014 L23: -0.1569 REMARK 3 S TENSOR REMARK 3 S11: 0.0249 S12: -0.1598 S13: -0.3924 REMARK 3 S21: -0.0576 S22: -0.0348 S23: -0.1546 REMARK 3 S31: 0.1653 S32: 0.0255 S33: 0.0100 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: {A|298 - A|312} REMARK 3 ORIGIN FOR THE GROUP (A): 111.9050 55.9147 106.9440 REMARK 3 T TENSOR REMARK 3 T11: -0.0228 T22: -0.0920 REMARK 3 T33: 0.0631 T12: 0.0398 REMARK 3 T13: -0.0039 T23: -0.0120 REMARK 3 L TENSOR REMARK 3 L11: 3.1740 L22: 1.4860 REMARK 3 L33: 6.4186 L12: 1.4750 REMARK 3 L13: -2.6478 L23: -2.8605 REMARK 3 S TENSOR REMARK 3 S11: 0.0659 S12: 0.2616 S13: -0.3200 REMARK 3 S21: -0.2396 S22: -0.0985 S23: -0.1596 REMARK 3 S31: 0.3634 S32: 0.0077 S33: 0.0327 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: {A|313 - A|321} REMARK 3 ORIGIN FOR THE GROUP (A): 111.6540 49.5403 125.2160 REMARK 3 T TENSOR REMARK 3 T11: -0.0164 T22: -0.0610 REMARK 3 T33: 0.0663 T12: -0.0265 REMARK 3 T13: -0.0034 T23: 0.1662 REMARK 3 L TENSOR REMARK 3 L11: 4.5658 L22: 2.3905 REMARK 3 L33: 2.1739 L12: -0.3610 REMARK 3 L13: -2.5376 L23: 2.5866 REMARK 3 S TENSOR REMARK 3 S11: 0.0155 S12: -0.6153 S13: -0.3946 REMARK 3 S21: 0.3527 S22: -0.3025 S23: 0.3403 REMARK 3 S31: -0.0257 S32: -0.0868 S33: 0.2870 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: {A|322 - A|330} REMARK 3 ORIGIN FOR THE GROUP (A): 124.5400 52.5534 128.5310 REMARK 3 T TENSOR REMARK 3 T11: 0.0009 T22: 0.0007 REMARK 3 T33: 0.1050 T12: 0.0402 REMARK 3 T13: -0.0713 T23: 0.1987 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.1846 REMARK 3 L33: 1.7740 L12: -3.7788 REMARK 3 L13: 0.1049 L23: 1.9604 REMARK 3 S TENSOR REMARK 3 S11: 0.0425 S12: -0.3046 S13: -0.0420 REMARK 3 S21: 0.1339 S22: 0.0731 S23: -0.3512 REMARK 3 S31: 0.1781 S32: 0.0725 S33: -0.1156 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5T79 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1000223833. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-AUG-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97917 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35207 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 0.56300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3ERP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5M NH4SULFATE, 12% SUCROSE, 0.1M REMARK 280 HEPES PH7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 33750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 89510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -344.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 188.77400 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 188.77400 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 188.77400 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 188.77400 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 188.77400 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 183.35400 REMARK 350 BIOMT1 6 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 188.77400 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 183.35400 REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 183.35400 REMARK 350 BIOMT1 8 0.000000 -1.000000 0.000000 188.77400 REMARK 350 BIOMT2 8 -1.000000 0.000000 0.000000 188.77400 REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 183.35400 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 235 REMARK 465 GLY A 236 REMARK 465 ILE A 237 REMARK 465 PRO A 238 REMARK 465 GLU A 239 REMARK 465 ASP A 240 REMARK 465 SER A 241 REMARK 465 ARG A 242 REMARK 465 ALA A 243 REMARK 465 ALA A 244 REMARK 465 SER A 245 REMARK 465 GLY A 246 REMARK 465 SER A 247 REMARK 465 ARG A 248 REMARK 465 PHE A 249 REMARK 465 ARG A 331 REMARK 465 PHE A 332 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 251 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN A 212 C GLU A 213 N 0.193 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 110 -148.31 72.46 REMARK 500 ASN A 313 68.61 -152.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 942 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A 943 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH A 944 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH A 945 DISTANCE = 6.86 ANGSTROMS REMARK 525 HOH A 946 DISTANCE = 7.29 ANGSTROMS REMARK 525 HOH A 947 DISTANCE = 7.44 ANGSTROMS REMARK 525 HOH A 948 DISTANCE = 8.10 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NDP A 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ERP RELATED DB: PDB REMARK 900 RELATED ID: CSGID-IDP01002 RELATED DB: TARGETTRACK DBREF 5T79 A 1 332 UNP Q8ZNA1 Q8ZNA1_SALTY 1 332 SEQRES 1 A 332 MET ILE TYR GLN PRO ASP GLU ASN ARG TYR HIS THR MET SEQRES 2 A 332 GLU TYR ARG ARG CYS GLY ARG SER GLY VAL LYS LEU PRO SEQRES 3 A 332 ALA ILE SER LEU GLY LEU TRP HIS ASN PHE GLY ASP THR SEQRES 4 A 332 THR ARG VAL GLU ASN SER ARG ALA LEU LEU GLN ARG ALA SEQRES 5 A 332 PHE ASP LEU GLY ILE THR HIS PHE ASP LEU ALA ASN ASN SEQRES 6 A 332 TYR GLY PRO PRO PRO GLY SER ALA GLU CYS ASN PHE GLY SEQRES 7 A 332 ARG ILE LEU GLN GLU ASP PHE LEU PRO TRP ARG ASP GLU SEQRES 8 A 332 LEU ILE ILE SER THR LYS ALA GLY TYR THR MET TRP ASP SEQRES 9 A 332 GLY PRO TYR GLY ASP TRP GLY SER ARG LYS TYR LEU ILE SEQRES 10 A 332 ALA SER LEU ASP GLN SER LEU LYS ARG MET GLY LEU GLU SEQRES 11 A 332 TYR VAL ASP ILE PHE TYR HIS HIS ARG PRO ASP PRO GLU SEQRES 12 A 332 THR PRO LEU LYS GLU THR MET LYS ALA LEU ASP HIS LEU SEQRES 13 A 332 VAL ARG HIS GLY LYS ALA LEU TYR VAL GLY ILE SER ASN SEQRES 14 A 332 TYR PRO ALA ASP LEU ALA ARG GLN ALA ILE ASP ILE LEU SEQRES 15 A 332 GLU ASP LEU GLY THR PRO CYS LEU ILE HIS GLN PRO LYS SEQRES 16 A 332 TYR SER LEU PHE GLU ARG TRP VAL GLU ASP GLY LEU LEU SEQRES 17 A 332 ALA LEU LEU GLN GLU LYS GLY VAL GLY SER ILE ALA PHE SEQRES 18 A 332 SER PRO LEU ALA GLY GLY GLN LEU THR ASP ARG TYR LEU SEQRES 19 A 332 ASN GLY ILE PRO GLU ASP SER ARG ALA ALA SER GLY SER SEQRES 20 A 332 ARG PHE LEU LYS PRO GLU GLN ILE THR ALA ASP LYS LEU SEQRES 21 A 332 GLU LYS VAL ARG ARG LEU ASN GLU LEU ALA ALA ARG ARG SEQRES 22 A 332 GLY GLN LYS LEU SER GLN MET ALA LEU ALA TRP VAL LEU SEQRES 23 A 332 ARG ASN ASP ASN VAL THR SER VAL LEU ILE GLY ALA SER SEQRES 24 A 332 LYS PRO SER GLN ILE GLU ASP ALA VAL GLY MET LEU ALA SEQRES 25 A 332 ASN ARG ARG PHE SER ALA ALA GLU CYS ALA GLU ILE ASP SEQRES 26 A 332 ALA ILE LEU GLU GLY ARG PHE HET SO4 A 401 5 HET SO4 A 402 5 HET CL A 403 1 HET NDP A 404 78 HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 CL CL 1- FORMUL 5 NDP C21 H30 N7 O17 P3 FORMUL 6 HOH *448(H2 O) HELIX 1 AA1 ASN A 8 MET A 13 1 6 HELIX 2 AA2 ARG A 41 LEU A 55 1 15 HELIX 3 AA3 GLY A 71 PHE A 85 1 15 HELIX 4 AA4 LEU A 86 LEU A 92 5 7 HELIX 5 AA5 SER A 112 GLY A 128 1 17 HELIX 6 AA6 PRO A 145 HIS A 159 1 15 HELIX 7 AA7 PRO A 171 GLY A 186 1 16 HELIX 8 AA8 ARG A 201 ASP A 205 5 5 HELIX 9 AA9 GLY A 206 GLY A 215 1 10 HELIX 10 AB1 LEU A 224 GLN A 228 5 5 HELIX 11 AB2 THR A 256 ARG A 273 1 18 HELIX 12 AB3 LYS A 276 LEU A 286 1 11 HELIX 13 AB4 LYS A 300 GLY A 309 1 10 HELIX 14 AB5 MET A 310 ASN A 313 5 4 HELIX 15 AB6 SER A 317 GLY A 330 1 14 SHEET 1 AA1 2 TYR A 15 ARG A 17 0 SHEET 2 AA1 2 LYS A 24 PRO A 26 -1 O LEU A 25 N ARG A 16 SHEET 1 AA2 9 ILE A 28 GLY A 31 0 SHEET 2 AA2 9 HIS A 59 ASP A 61 1 O HIS A 59 N LEU A 30 SHEET 3 AA2 9 ILE A 93 ALA A 98 1 O ILE A 93 N PHE A 60 SHEET 4 AA2 9 VAL A 132 HIS A 137 1 O TYR A 136 N THR A 96 SHEET 5 AA2 9 ALA A 162 SER A 168 1 O TYR A 164 N PHE A 135 SHEET 6 AA2 9 ILE A 191 GLN A 193 1 O GLN A 193 N ILE A 167 SHEET 7 AA2 9 GLY A 217 ALA A 220 1 O ILE A 219 N HIS A 192 SHEET 8 AA2 9 SER A 293 ILE A 296 1 O LEU A 295 N ALA A 220 SHEET 9 AA2 9 ILE A 28 GLY A 31 1 N GLY A 31 O ILE A 296 CISPEP 1 GLY A 67 PRO A 68 0 2.70 CISPEP 2 PRO A 68 PRO A 69 0 -2.07 SITE 1 AC1 8 ARG A 201 ARG A 287 ASN A 288 CYS A 321 SITE 2 AC1 8 HOH A 504 HOH A 516 HOH A 671 HOH A 733 SITE 1 AC2 7 PRO A 145 LEU A 146 HOH A 550 HOH A 551 SITE 2 AC2 7 HOH A 615 HOH A 650 HOH A 667 SITE 1 AC3 3 ARG A 89 GLU A 130 TYR A 131 SITE 1 AC4 31 GLY A 31 LEU A 32 TRP A 33 ASP A 61 SITE 2 AC4 31 TYR A 66 HIS A 138 SER A 168 ASN A 169 SITE 3 AC4 31 GLN A 193 PHE A 221 SER A 222 PRO A 223 SITE 4 AC4 31 LEU A 224 GLY A 226 GLY A 227 THR A 230 SITE 5 AC4 31 ARG A 232 SER A 278 LEU A 295 ILE A 296 SITE 6 AC4 31 GLY A 297 SER A 299 GLN A 303 ASP A 306 SITE 7 AC4 31 HOH A 507 HOH A 569 HOH A 575 HOH A 587 SITE 8 AC4 31 HOH A 597 HOH A 707 HOH A 753 CRYST1 94.387 94.387 91.677 90.00 90.00 90.00 P 4 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010595 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010595 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010908 0.00000