data_5T83 # _entry.id 5T83 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5T83 pdb_00005t83 10.2210/pdb5t83/pdb WWPDB D_1000223845 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-01-11 2 'Structure model' 1 1 2017-09-27 3 'Structure model' 1 2 2019-12-25 4 'Structure model' 1 3 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 2 'Structure model' 'Refinement description' 3 3 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 2 'Structure model' software 3 3 'Structure model' pdbx_audit_support 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 7 4 'Structure model' diffrn_radiation_wavelength 8 4 'Structure model' pdbx_struct_conn_angle 9 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 2 'Structure model' '_software.version' 3 3 'Structure model' '_pdbx_audit_support.funding_organization' 4 4 'Structure model' '_database_2.pdbx_DOI' 5 4 'Structure model' '_database_2.pdbx_database_accession' 6 4 'Structure model' '_diffrn_radiation_wavelength.wavelength' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_symmetry' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 22 4 'Structure model' '_pdbx_struct_conn_angle.value' 23 4 'Structure model' '_struct_conn.pdbx_dist_value' 24 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 25 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 31 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 4 'Structure model' '_struct_conn.ptnr2_symmetry' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5T83 _pdbx_database_status.recvd_initial_deposition_date 2016-09-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Reiss, C.W.' 1 'Xiong, Y.' 2 'Strobel, S.A.' 3 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? UK ? ? primary Structure STRUE6 2005 1878-4186 ? ? 25 ? 195 202 'Structural Basis for Ligand Binding to the Guanidine-I Riboswitch.' 2017 ? 10.1016/j.str.2016.11.020 28017522 ? ? ? ? ? ? ? ? ? ? ? 1 'to be published' ? 0353 ? ? ? ? ? ? ? 'Metabolism of Free Guanidine in Bacteria is Regulated by Widespread Riboswitch Classes' ? ? ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Reiss, C.W.' 1 ? primary 'Xiong, Y.' 2 ? primary 'Strobel, S.A.' 3 ? 1 'Nelson, J.W.' 4 ? 1 'Atilho, R.M.' 5 ? 1 'Sherlock, M.E.' 6 ? 1 'Reiss, C.W.' 7 ? 1 'Strobel, S.A.' 8 ? 1 'Stockbridge, R.B.' 9 ? 1 'Breaker, R.R.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (95-MER)' 30736.305 1 ? 'U24G, A25U, G26C, C30G, U31G, A32U' ? ? 2 non-polymer syn 'STRONTIUM ION' 87.620 9 ? ? ? ? 3 non-polymer syn 'SPERMINE (FULLY PROTONATED FORM)' 206.372 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 5 non-polymer syn 'IRIDIUM HEXAMMINE ION' 294.400 3 ? ? ? ? 6 non-polymer syn GUANIDINE 59.070 1 ? ? ? ? 7 water nat water 18.015 18 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GUCUAAAGUUUGCUAGGGUUCCGCGUCAUAGGUGGUCUGGUCCAAGAGCAAACGGCUUUCACAAAGCCACACGGAAGGAU AAAAGCCUGGGAGAU ; _entity_poly.pdbx_seq_one_letter_code_can ;GUCUAAAGUUUGCUAGGGUUCCGCGUCAUAGGUGGUCUGGUCCAAGAGCAAACGGCUUUCACAAAGCCACACGGAAGGAU AAAAGCCUGGGAGAU ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'STRONTIUM ION' SR 3 'SPERMINE (FULLY PROTONATED FORM)' SPK 4 'MAGNESIUM ION' MG 5 'IRIDIUM HEXAMMINE ION' IRI 6 GUANIDINE GAI 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 U n 1 3 C n 1 4 U n 1 5 A n 1 6 A n 1 7 A n 1 8 G n 1 9 U n 1 10 U n 1 11 U n 1 12 G n 1 13 C n 1 14 U n 1 15 A n 1 16 G n 1 17 G n 1 18 G n 1 19 U n 1 20 U n 1 21 C n 1 22 C n 1 23 G n 1 24 C n 1 25 G n 1 26 U n 1 27 C n 1 28 A n 1 29 U n 1 30 A n 1 31 G n 1 32 G n 1 33 U n 1 34 G n 1 35 G n 1 36 U n 1 37 C n 1 38 U n 1 39 G n 1 40 G n 1 41 U n 1 42 C n 1 43 C n 1 44 A n 1 45 A n 1 46 G n 1 47 A n 1 48 G n 1 49 C n 1 50 A n 1 51 A n 1 52 A n 1 53 C n 1 54 G n 1 55 G n 1 56 C n 1 57 U n 1 58 U n 1 59 U n 1 60 C n 1 61 A n 1 62 C n 1 63 A n 1 64 A n 1 65 A n 1 66 G n 1 67 C n 1 68 C n 1 69 A n 1 70 C n 1 71 A n 1 72 C n 1 73 G n 1 74 G n 1 75 A n 1 76 A n 1 77 G n 1 78 G n 1 79 A n 1 80 U n 1 81 A n 1 82 A n 1 83 A n 1 84 A n 1 85 G n 1 86 C n 1 87 C n 1 88 U n 1 89 G n 1 90 G n 1 91 G n 1 92 A n 1 93 G n 1 94 A n 1 95 U n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 95 _pdbx_entity_src_syn.organism_scientific 'Sulfobacillus acidophilus DSM 10332' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 679936 _pdbx_entity_src_syn.details 'RNA was prepared by in vitro transcription with T7 RNA polymerase' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GAI non-polymer . GUANIDINE ? 'C H5 N3' 59.070 HOH non-polymer . WATER ? 'H2 O' 18.015 IRI non-polymer . 'IRIDIUM HEXAMMINE ION' ? 'H18 Ir N6 3' 294.400 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 SPK non-polymer . 'SPERMINE (FULLY PROTONATED FORM)' ? 'C10 H30 N4 4' 206.372 SR non-polymer . 'STRONTIUM ION' ? 'Sr 2' 87.620 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 0 ? ? ? A . n A 1 2 U 2 1 ? ? ? A . n A 1 3 C 3 2 ? ? ? A . n A 1 4 U 4 3 ? ? ? A . n A 1 5 A 5 4 ? ? ? A . n A 1 6 A 6 5 5 A A A . n A 1 7 A 7 6 6 A A A . n A 1 8 G 8 7 7 G G A . n A 1 9 U 9 8 8 U U A . n A 1 10 U 10 9 9 U U A . n A 1 11 U 11 10 10 U U A . n A 1 12 G 12 11 11 G G A . n A 1 13 C 13 12 12 C C A . n A 1 14 U 14 13 13 U U A . n A 1 15 A 15 14 14 A A A . n A 1 16 G 16 15 15 G G A . n A 1 17 G 17 16 16 G G A . n A 1 18 G 18 17 17 G G A . n A 1 19 U 19 18 18 U U A . n A 1 20 U 20 19 19 U U A . n A 1 21 C 21 20 20 C C A . n A 1 22 C 22 21 21 C C A . n A 1 23 G 23 22 22 G G A . n A 1 24 C 24 23 23 C C A . n A 1 25 G 25 24 24 G G A . n A 1 26 U 26 25 25 U U A . n A 1 27 C 27 26 26 C C A . n A 1 28 A 28 27 27 A A A . n A 1 29 U 29 28 28 U U A . n A 1 30 A 30 29 29 A A A . n A 1 31 G 31 30 30 G G A . n A 1 32 G 32 31 31 G G A . n A 1 33 U 33 32 32 U U A . n A 1 34 G 34 33 33 G G A . n A 1 35 G 35 34 34 G G A . n A 1 36 U 36 35 35 U U A . n A 1 37 C 37 36 36 C C A . n A 1 38 U 38 37 37 U U A . n A 1 39 G 39 38 38 G G A . n A 1 40 G 40 39 39 G G A . n A 1 41 U 41 40 40 U U A . n A 1 42 C 42 41 41 C C A . n A 1 43 C 43 42 42 C C A . n A 1 44 A 44 43 43 A A A . n A 1 45 A 45 44 44 A A A . n A 1 46 G 46 45 45 G G A . n A 1 47 A 47 46 46 A A A . n A 1 48 G 48 47 47 G G A . n A 1 49 C 49 48 48 C C A . n A 1 50 A 50 49 49 A A A . n A 1 51 A 51 50 50 A A A . n A 1 52 A 52 51 51 A A A . n A 1 53 C 53 52 52 C C A . n A 1 54 G 54 53 53 G G A . n A 1 55 G 55 54 54 G G A . n A 1 56 C 56 55 55 C C A . n A 1 57 U 57 56 56 U U A . n A 1 58 U 58 57 57 U U A . n A 1 59 U 59 58 58 U U A . n A 1 60 C 60 59 59 C C A . n A 1 61 A 61 60 60 A A A . n A 1 62 C 62 61 61 C C A . n A 1 63 A 63 62 62 A A A . n A 1 64 A 64 63 63 A A A . n A 1 65 A 65 64 64 A A A . n A 1 66 G 66 65 65 G G A . n A 1 67 C 67 66 66 C C A . n A 1 68 C 68 67 67 C C A . n A 1 69 A 69 68 68 A A A . n A 1 70 C 70 69 69 C C A . n A 1 71 A 71 70 70 A A A . n A 1 72 C 72 71 71 C C A . n A 1 73 G 73 72 72 G G A . n A 1 74 G 74 73 73 G G A . n A 1 75 A 75 74 74 A A A . n A 1 76 A 76 75 75 A A A . n A 1 77 G 77 76 76 G G A . n A 1 78 G 78 77 77 G G A . n A 1 79 A 79 78 78 A A A . n A 1 80 U 80 79 79 U U A . n A 1 81 A 81 80 80 A A A . n A 1 82 A 82 81 81 A A A . n A 1 83 A 83 82 82 A A A . n A 1 84 A 84 83 83 A A A . n A 1 85 G 85 84 84 G G A . n A 1 86 C 86 85 85 C C A . n A 1 87 C 87 86 86 C C A . n A 1 88 U 88 87 87 U U A . n A 1 89 G 89 88 88 G G A . n A 1 90 G 90 89 89 G G A . n A 1 91 G 91 90 90 G G A . n A 1 92 A 92 91 91 A A A . n A 1 93 G 93 92 92 G G A . n A 1 94 A 94 93 93 A A A . n A 1 95 U 95 94 94 U U A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SR 1 101 1 SR SR A . C 2 SR 1 102 2 SR SR A . D 2 SR 1 103 3 SR SR A . E 2 SR 1 104 4 SR SR A . F 2 SR 1 105 5 SR SR A . G 2 SR 1 106 6 SR SR A . H 2 SR 1 107 7 SR SR A . I 2 SR 1 108 8 SR SR A . J 2 SR 1 109 9 SR SR A . K 3 SPK 1 110 13 SPK SPK A . L 4 MG 1 111 16 MG MG A . M 4 MG 1 112 17 MG MG A . N 5 IRI 1 113 21 IRI IRI A . O 5 IRI 1 114 22 IRI IRI A . P 5 IRI 1 115 23 IRI IRI A . Q 6 GAI 1 116 1 GAI GAI A . R 7 HOH 1 201 4 HOH HOH A . R 7 HOH 2 202 16 HOH HOH A . R 7 HOH 3 203 5 HOH HOH A . R 7 HOH 4 204 1 HOH HOH A . R 7 HOH 5 205 2 HOH HOH A . R 7 HOH 6 206 15 HOH HOH A . R 7 HOH 7 207 13 HOH HOH A . R 7 HOH 8 208 6 HOH HOH A . R 7 HOH 9 209 3 HOH HOH A . R 7 HOH 10 210 17 HOH HOH A . R 7 HOH 11 211 18 HOH HOH A . R 7 HOH 12 212 12 HOH HOH A . R 7 HOH 13 213 8 HOH HOH A . R 7 HOH 14 214 9 HOH HOH A . R 7 HOH 15 215 14 HOH HOH A . R 7 HOH 16 216 11 HOH HOH A . R 7 HOH 17 217 10 HOH HOH A . R 7 HOH 18 218 7 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A U 28 ? "C5'" ? A U 29 "C5'" 2 1 Y 1 A U 28 ? "C4'" ? A U 29 "C4'" 3 1 Y 1 A U 28 ? "O4'" ? A U 29 "O4'" 4 1 Y 1 A U 28 ? "C3'" ? A U 29 "C3'" 5 1 Y 1 A U 28 ? "O3'" ? A U 29 "O3'" 6 1 Y 1 A U 28 ? "C2'" ? A U 29 "C2'" 7 1 Y 1 A U 28 ? "O2'" ? A U 29 "O2'" 8 1 Y 1 A U 28 ? "C1'" ? A U 29 "C1'" 9 1 Y 1 A U 28 ? N1 ? A U 29 N1 10 1 Y 1 A U 28 ? C2 ? A U 29 C2 11 1 Y 1 A U 28 ? O2 ? A U 29 O2 12 1 Y 1 A U 28 ? N3 ? A U 29 N3 13 1 Y 1 A U 28 ? C4 ? A U 29 C4 14 1 Y 1 A U 28 ? O4 ? A U 29 O4 15 1 Y 1 A U 28 ? C5 ? A U 29 C5 16 1 Y 1 A U 28 ? C6 ? A U 29 C6 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0155 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.20 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 5 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 6 # _cell.entry_id 5T83 _cell.length_a 49.091 _cell.length_b 49.091 _cell.length_c 246.341 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5T83 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5T83 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.40 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.8 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method MICROBATCH _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 296 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;RNA solution: 130 uM RNA in 10 mM MgCl2, 10 mM KCl, and 10 mM HEPES-KOH, pH 7.5; Reagent: 32% MPD, 40 mM SrCl2, 12 mM spermine, 40 mM sodium acetate, pH 4.6, and 0.8 mM iridium (III) hexamine; RNA solution and reagent mixed 1:1 ; _exptl_crystal_grow.pdbx_pH_range ? # loop_ _diffrn.ambient_environment _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.ambient_temp_esd _diffrn.crystal_id _diffrn.crystal_support _diffrn.crystal_treatment _diffrn.details _diffrn.id _diffrn.ambient_pressure _diffrn.ambient_pressure_esd _diffrn.ambient_pressure_gt _diffrn.ambient_pressure_lt _diffrn.ambient_temp_gt _diffrn.ambient_temp_lt ? 100 ? ? 1 ? ? ? 1 ? ? ? ? ? ? ? 100 ? ? 1 ? ? ? 2 ? ? ? ? ? ? # loop_ _diffrn_detector.details _diffrn_detector.detector _diffrn_detector.diffrn_id _diffrn_detector.type _diffrn_detector.area_resol_mean _diffrn_detector.dtime _diffrn_detector.pdbx_frames_total _diffrn_detector.pdbx_collection_time_total _diffrn_detector.pdbx_collection_date ? CCD 1 'ADSC QUANTUM 315' ? ? ? ? 2016-05-25 ? CCD 2 'ADSC QUANTUM 210r' ? ? ? ? 2016-03-17 # loop_ _diffrn_radiation.collimation _diffrn_radiation.diffrn_id _diffrn_radiation.filter_edge _diffrn_radiation.inhomogeneity _diffrn_radiation.monochromator _diffrn_radiation.polarisn_norm _diffrn_radiation.polarisn_ratio _diffrn_radiation.probe _diffrn_radiation.type _diffrn_radiation.xray_symbol _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_wavelength_list _diffrn_radiation.pdbx_wavelength _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_analyzer _diffrn_radiation.pdbx_scattering_type ? 1 ? ? ? ? ? ? ? ? 1 M ? ? MAD ? x-ray ? 2 ? ? 'Double crystal, Si(111)' ? ? ? ? ? 2 M ? ? 'SINGLE WAVELENGTH' ? x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.999946 1.0 2 1.10532 1.0 3 1.10482 1.0 4 1.10062 1.0 # loop_ _diffrn_source.current _diffrn_source.details _diffrn_source.diffrn_id _diffrn_source.power _diffrn_source.size _diffrn_source.source _diffrn_source.target _diffrn_source.type _diffrn_source.voltage _diffrn_source.take-off_angle _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_synchrotron_site ? ? 1 ? ? SYNCHROTRON ? 'ALS BEAMLINE 8.2.2' ? ? '0.999946, 1.10532, 1.10482' ? 8.2.2 ALS ? ? 2 ? ? SYNCHROTRON ? 'APS BEAMLINE 19-BM' ? ? 1.10062 ? 19-BM APS # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5T83 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.000 _reflns.d_resolution_high 2.700 _reflns.number_obs 15638 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.07400 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.2000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.900 _reflns.pdbx_CC_half ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.70 _reflns_shell.d_res_low 2.75 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.71200 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 6.70 _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_CC_half ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5T83 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 8451 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.00 _refine.ls_d_res_high 2.71 _refine.ls_percent_reflns_obs 99.1 _refine.ls_R_factor_obs 0.202 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.200 _refine.ls_R_factor_R_free 0.226 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.900 _refine.ls_number_reflns_R_free 434 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 83.61 _refine.aniso_B[1][1] 4.35000 _refine.aniso_B[2][2] 4.35000 _refine.aniso_B[3][3] -8.70000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 1.091 _refine.pdbx_overall_ESU_R_Free 0.302 _refine.overall_SU_ML 0.272 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 14.244 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1917 _refine_hist.pdbx_number_atoms_ligand 62 _refine_hist.number_atoms_solvent 6 _refine_hist.number_atoms_total 1985 _refine_hist.d_res_high 2.71 _refine_hist.d_res_low 40.00 # _struct.entry_id 5T83 _struct.title 'Structure of a guanidine-I riboswitch from S. acidophilus' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5T83 _struct_keywords.text 'riboswitch, guanidine, s-turn, a-minor, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 3 ? L N N 4 ? M N N 4 ? N N N 5 ? O N N 5 ? P N N 5 ? Q N N 6 ? R N N 7 ? # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code CP003179.1 _struct_ref.pdbx_db_accession 361052061 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;UCUAAAGUUUGCUAGGGUUCCGCUAGAUACUAGGUCUGGUCCAAGAGCAAACGGCUUUCACAAAGCCACACGGAAGGAUA AAAGCCUGGGAGAU ; _struct_ref.pdbx_align_begin 1011131 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5T83 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 95 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 361052061 _struct_ref_seq.db_align_beg 1011131 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1011224 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 94 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5T83 G A 1 ? GB 361052061 ? ? insertion 0 1 1 5T83 G A 25 ? GB 361052061 U 1011154 'engineered mutation' 24 2 1 5T83 U A 26 ? GB 361052061 A 1011155 'engineered mutation' 25 3 1 5T83 C A 27 ? GB 361052061 G 1011156 'engineered mutation' 26 4 1 5T83 G A 31 ? GB 361052061 C 1011160 'engineered mutation' 30 5 1 5T83 G A 32 ? GB 361052061 U 1011161 'engineered mutation' 31 6 1 5T83 U A 33 ? GB 361052061 A 1011162 'engineered mutation' 32 7 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 8 OP1 ? ? ? 1_555 J SR . SR ? ? A G 7 A SR 109 1_555 ? ? ? ? ? ? ? 2.453 ? ? metalc2 metalc ? ? A A 15 OP2 ? ? ? 1_555 B SR . SR ? ? A A 14 A SR 101 1_555 ? ? ? ? ? ? ? 2.548 ? ? metalc3 metalc ? ? A G 16 N7 ? ? ? 1_555 B SR . SR ? ? A G 15 A SR 101 1_555 ? ? ? ? ? ? ? 2.645 ? ? metalc4 metalc ? ? A G 16 O6 ? ? ? 1_555 B SR . SR ? ? A G 15 A SR 101 1_555 ? ? ? ? ? ? ? 2.774 ? ? metalc5 metalc ? ? A G 18 O6 ? ? ? 1_555 E SR . SR ? ? A G 17 A SR 104 1_555 ? ? ? ? ? ? ? 2.769 ? ? metalc6 metalc ? ? A U 36 O4 ? ? ? 1_555 I SR . SR ? ? A U 35 A SR 108 7_466 ? ? ? ? ? ? ? 2.848 ? ? metalc7 metalc ? ? A G 46 OP2 ? ? ? 1_555 D SR . SR ? ? A G 45 A SR 103 1_555 ? ? ? ? ? ? ? 2.327 ? ? metalc8 metalc ? ? A G 46 OP1 ? ? ? 1_555 H SR . SR ? ? A G 45 A SR 107 1_555 ? ? ? ? ? ? ? 2.318 ? ? metalc9 metalc ? ? A G 77 O6 ? ? ? 1_555 C SR . SR ? ? A G 76 A SR 102 1_555 ? ? ? ? ? ? ? 2.502 ? ? metalc10 metalc ? ? A G 85 OP1 ? ? ? 1_555 I SR . SR ? ? A G 84 A SR 108 1_555 ? ? ? ? ? ? ? 2.506 ? ? metalc11 metalc ? ? A C 86 OP1 ? ? ? 1_555 H SR . SR ? ? A C 85 A SR 107 1_555 ? ? ? ? ? ? ? 2.337 ? ? metalc12 metalc ? ? A G 93 N7 ? ? ? 1_555 G SR . SR ? ? A G 92 A SR 106 1_555 ? ? ? ? ? ? ? 2.772 ? ? metalc13 metalc ? ? A G 93 O6 ? ? ? 1_555 G SR . SR ? ? A G 92 A SR 106 1_555 ? ? ? ? ? ? ? 2.608 ? ? metalc14 metalc ? ? B SR . SR ? ? ? 1_555 R HOH . O ? ? A SR 101 A HOH 204 1_555 ? ? ? ? ? ? ? 2.719 ? ? metalc15 metalc ? ? B SR . SR ? ? ? 1_555 R HOH . O ? ? A SR 101 A HOH 205 1_555 ? ? ? ? ? ? ? 2.369 ? ? metalc16 metalc ? ? B SR . SR ? ? ? 1_555 R HOH . O ? ? A SR 101 A HOH 209 1_555 ? ? ? ? ? ? ? 2.598 ? ? metalc17 metalc ? ? G SR . SR ? ? ? 1_555 R HOH . O ? ? A SR 106 A HOH 201 1_555 ? ? ? ? ? ? ? 2.786 ? ? metalc18 metalc ? ? L MG . MG ? ? ? 1_555 R HOH . O ? ? A MG 111 A HOH 212 4_445 ? ? ? ? ? ? ? 2.204 ? ? metalc19 metalc ? ? L MG . MG ? ? ? 1_555 R HOH . O ? ? A MG 111 A HOH 213 1_555 ? ? ? ? ? ? ? 2.191 ? ? metalc20 metalc ? ? L MG . MG ? ? ? 1_555 R HOH . O ? ? A MG 111 A HOH 214 1_555 ? ? ? ? ? ? ? 2.190 ? ? metalc21 metalc ? ? L MG . MG ? ? ? 1_555 R HOH . O ? ? A MG 111 A HOH 216 1_555 ? ? ? ? ? ? ? 2.179 ? ? metalc22 metalc ? ? L MG . MG ? ? ? 1_555 R HOH . O ? ? A MG 111 A HOH 217 4_445 ? ? ? ? ? ? ? 2.183 ? ? metalc23 metalc ? ? L MG . MG ? ? ? 1_555 R HOH . O ? ? A MG 111 A HOH 218 7_466 ? ? ? ? ? ? ? 2.183 ? ? metalc24 metalc ? ? M MG . MG ? ? ? 1_555 R HOH . O ? ? A MG 112 A HOH 202 1_555 ? ? ? ? ? ? ? 2.165 ? ? metalc25 metalc ? ? M MG . MG ? ? ? 1_555 R HOH . O ? ? A MG 112 A HOH 206 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc26 metalc ? ? M MG . MG ? ? ? 1_555 R HOH . O ? ? A MG 112 A HOH 207 1_555 ? ? ? ? ? ? ? 2.188 ? ? metalc27 metalc ? ? M MG . MG ? ? ? 1_555 R HOH . O ? ? A MG 112 A HOH 210 1_555 ? ? ? ? ? ? ? 2.191 ? ? metalc28 metalc ? ? M MG . MG ? ? ? 1_555 R HOH . O ? ? A MG 112 A HOH 211 1_555 ? ? ? ? ? ? ? 2.190 ? ? metalc29 metalc ? ? M MG . MG ? ? ? 1_555 R HOH . O ? ? A MG 112 A HOH 215 1_555 ? ? ? ? ? ? ? 2.190 ? ? hydrog1 hydrog ? ? A A 6 N1 ? ? ? 1_555 A G 54 N2 ? ? A A 5 A G 53 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog2 hydrog ? ? A A 6 N6 ? ? ? 1_555 A G 54 N3 ? ? A A 5 A G 53 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog3 hydrog ? ? A A 7 N3 ? ? ? 1_555 A A 69 N6 ? ? A A 6 A A 68 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog4 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 53 N3 ? ? A G 7 A C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 53 O2 ? ? A G 7 A C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 53 N4 ? ? A G 7 A C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A U 9 N3 ? ? ? 1_555 A A 52 N1 ? ? A U 8 A A 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A U 9 O4 ? ? ? 1_555 A A 52 N6 ? ? A U 8 A A 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A U 10 N3 ? ? ? 1_555 A A 51 N1 ? ? A U 9 A A 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 10 O4 ? ? ? 1_555 A A 51 N6 ? ? A U 9 A A 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A U 11 N3 ? ? ? 1_555 A A 50 N1 ? ? A U 10 A A 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A U 11 O4 ? ? ? 1_555 A A 50 N6 ? ? A U 10 A A 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 12 N1 ? ? ? 1_555 A C 49 N3 ? ? A G 11 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 12 N2 ? ? ? 1_555 A C 49 O2 ? ? A G 11 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 12 O6 ? ? ? 1_555 A C 49 N4 ? ? A G 11 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 48 N1 ? ? A C 12 A G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 48 O6 ? ? A C 12 A G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 48 N2 ? ? A C 12 A G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A U 14 N3 ? ? ? 1_555 A A 45 N7 ? ? A U 13 A A 44 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog20 hydrog ? ? A U 14 O2 ? ? ? 1_555 A A 45 N6 ? ? A U 13 A A 44 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog21 hydrog ? ? A A 15 N6 ? ? ? 1_555 A A 44 N3 ? ? A A 14 A A 43 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog22 hydrog ? ? A G 16 N1 ? ? ? 1_555 A C 43 N3 ? ? A G 15 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 16 N2 ? ? ? 1_555 A C 43 O2 ? ? A G 15 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 16 O6 ? ? ? 1_555 A C 43 N4 ? ? A G 15 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 16 N2 ? ? ? 1_555 A A 84 N3 ? ? A G 15 A A 83 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog26 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 42 N3 ? ? A G 16 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 42 O2 ? ? A G 16 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 42 N4 ? ? A G 16 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 18 N2 ? ? ? 1_555 A U 20 O4 ? ? A G 17 A U 19 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog30 hydrog ? ? A G 18 N1 ? ? ? 1_555 A U 41 O4 ? ? A G 17 A U 40 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog31 hydrog ? ? A G 18 N2 ? ? ? 1_555 A A 81 N1 ? ? A G 17 A A 80 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog32 hydrog ? ? A U 19 O2 ? ? ? 1_555 A C 21 N4 ? ? A U 18 A C 20 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog33 hydrog ? ? A U 20 O4 ? ? ? 1_555 A U 41 N3 ? ? A U 19 A U 40 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog34 hydrog ? ? A C 21 N3 ? ? ? 1_555 A G 40 N1 ? ? A C 20 A G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A C 21 N4 ? ? ? 1_555 A G 40 O6 ? ? A C 20 A G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A C 21 O2 ? ? ? 1_555 A G 40 N2 ? ? A C 20 A G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A C 22 N4 ? ? ? 1_555 A G 35 O6 ? ? A C 21 A G 34 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog38 hydrog ? ? A C 22 N3 ? ? ? 1_555 A G 39 N1 ? ? A C 21 A G 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 22 N4 ? ? ? 1_555 A G 39 O6 ? ? A C 21 A G 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 22 O2 ? ? ? 1_555 A G 39 N2 ? ? A C 21 A G 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 23 N1 ? ? ? 1_555 A C 37 N3 ? ? A G 22 A C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 23 N2 ? ? ? 1_555 A C 37 O2 ? ? A G 22 A C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 23 O6 ? ? ? 1_555 A C 37 N4 ? ? A G 22 A C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 23 N2 ? ? ? 1_555 A U 38 O4 ? ? A G 22 A U 37 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog45 hydrog ? ? A C 24 N3 ? ? ? 1_555 A G 34 N1 ? ? A C 23 A G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 24 N4 ? ? ? 1_555 A G 34 O6 ? ? A C 23 A G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A C 24 O2 ? ? ? 1_555 A G 34 N2 ? ? A C 23 A G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 25 N1 ? ? ? 1_555 A U 33 O2 ? ? A G 24 A U 32 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog49 hydrog ? ? A G 25 O6 ? ? ? 1_555 A U 33 N3 ? ? A G 24 A U 32 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog50 hydrog ? ? A U 26 N3 ? ? ? 1_555 A G 32 O6 ? ? A U 25 A G 31 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog51 hydrog ? ? A U 26 O2 ? ? ? 1_555 A G 32 N1 ? ? A U 25 A G 31 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog52 hydrog ? ? A C 27 N3 ? ? ? 1_555 A G 31 N1 ? ? A C 26 A G 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A C 27 N4 ? ? ? 1_555 A G 31 O6 ? ? A C 26 A G 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A C 27 O2 ? ? ? 1_555 A G 31 N2 ? ? A C 26 A G 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A A 28 N1 ? ? ? 1_555 A A 30 N6 ? ? A A 27 A A 29 1_555 ? ? ? ? ? ? TYPE_1_PAIR ? ? ? hydrog56 hydrog ? ? A A 28 N6 ? ? ? 1_555 A A 30 N1 ? ? A A 27 A A 29 1_555 ? ? ? ? ? ? TYPE_1_PAIR ? ? ? hydrog57 hydrog ? ? A G 35 N1 ? ? ? 1_555 A G 39 O6 ? ? A G 34 A G 38 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog58 hydrog ? ? A G 35 N2 ? ? ? 1_555 A G 39 N7 ? ? A G 34 A G 38 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog59 hydrog ? ? A G 46 N2 ? ? ? 1_555 A A 71 N3 ? ? A G 45 A A 70 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog60 hydrog ? ? A G 54 N1 ? ? ? 1_555 A C 68 N3 ? ? A G 53 A C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A G 54 N2 ? ? ? 1_555 A C 68 O2 ? ? A G 53 A C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A G 54 O6 ? ? ? 1_555 A C 68 N4 ? ? A G 53 A C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A G 55 N1 ? ? ? 1_555 A C 67 N3 ? ? A G 54 A C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A G 55 N2 ? ? ? 1_555 A C 67 O2 ? ? A G 54 A C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A G 55 O6 ? ? ? 1_555 A C 67 N4 ? ? A G 54 A C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A C 56 N3 ? ? ? 1_555 A G 66 N1 ? ? A C 55 A G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A C 56 N4 ? ? ? 1_555 A G 66 O6 ? ? A C 55 A G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A C 56 O2 ? ? ? 1_555 A G 66 N2 ? ? A C 55 A G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A U 57 N3 ? ? ? 1_555 A A 65 N1 ? ? A U 56 A A 64 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog70 hydrog ? ? A U 58 O2 ? ? ? 1_555 A A 64 N6 ? ? A U 57 A A 63 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog71 hydrog ? ? A C 70 N3 ? ? ? 1_555 A G 90 N1 ? ? A C 69 A G 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A C 70 N4 ? ? ? 1_555 A G 90 O6 ? ? A C 69 A G 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A C 70 O2 ? ? ? 1_555 A G 90 N2 ? ? A C 69 A G 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A C 72 N3 ? ? ? 1_555 A G 93 N1 ? ? A C 71 A G 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 72 N4 ? ? ? 1_555 A G 93 O6 ? ? A C 71 A G 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A C 72 O2 ? ? ? 1_555 A G 93 N2 ? ? A C 71 A G 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A G 73 N2 ? ? ? 1_555 A A 92 N7 ? ? A G 72 A A 91 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog78 hydrog ? ? A G 73 N3 ? ? ? 1_555 A A 92 N6 ? ? A G 72 A A 91 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog79 hydrog ? ? A G 74 N7 ? ? ? 1_555 A G 91 N1 ? ? A G 73 A G 90 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog80 hydrog ? ? A G 74 O6 ? ? ? 1_555 A G 91 N2 ? ? A G 73 A G 90 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog81 hydrog ? ? A A 75 N6 ? ? ? 1_555 A G 89 O6 ? ? A A 74 A G 88 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog82 hydrog ? ? A A 76 N6 ? ? ? 1_555 A U 88 O2 ? ? A A 75 A U 87 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog83 hydrog ? ? A G 77 N1 ? ? ? 1_555 A C 87 N3 ? ? A G 76 A C 86 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog84 hydrog ? ? A G 78 N1 ? ? ? 1_555 A C 86 N3 ? ? A G 77 A C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A G 78 N2 ? ? ? 1_555 A C 86 O2 ? ? A G 77 A C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A G 78 O6 ? ? ? 1_555 A C 86 N4 ? ? A G 77 A C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A A 79 N1 ? ? ? 1_555 A A 84 N6 ? ? A A 78 A A 83 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog88 hydrog ? ? A U 80 N3 ? ? ? 1_555 A A 83 N7 ? ? A U 79 A A 82 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog89 hydrog ? ? A U 80 O2 ? ? ? 1_555 A A 83 N6 ? ? A U 79 A A 82 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP2 ? A A 15 ? A A 14 ? 1_555 SR ? B SR . ? A SR 101 ? 1_555 N7 ? A G 16 ? A G 15 ? 1_555 85.4 ? 2 OP2 ? A A 15 ? A A 14 ? 1_555 SR ? B SR . ? A SR 101 ? 1_555 O6 ? A G 16 ? A G 15 ? 1_555 125.3 ? 3 N7 ? A G 16 ? A G 15 ? 1_555 SR ? B SR . ? A SR 101 ? 1_555 O6 ? A G 16 ? A G 15 ? 1_555 69.7 ? 4 OP2 ? A A 15 ? A A 14 ? 1_555 SR ? B SR . ? A SR 101 ? 1_555 O ? R HOH . ? A HOH 204 ? 1_555 140.8 ? 5 N7 ? A G 16 ? A G 15 ? 1_555 SR ? B SR . ? A SR 101 ? 1_555 O ? R HOH . ? A HOH 204 ? 1_555 74.7 ? 6 O6 ? A G 16 ? A G 15 ? 1_555 SR ? B SR . ? A SR 101 ? 1_555 O ? R HOH . ? A HOH 204 ? 1_555 78.9 ? 7 OP2 ? A A 15 ? A A 14 ? 1_555 SR ? B SR . ? A SR 101 ? 1_555 O ? R HOH . ? A HOH 205 ? 1_555 66.4 ? 8 N7 ? A G 16 ? A G 15 ? 1_555 SR ? B SR . ? A SR 101 ? 1_555 O ? R HOH . ? A HOH 205 ? 1_555 79.2 ? 9 O6 ? A G 16 ? A G 15 ? 1_555 SR ? B SR . ? A SR 101 ? 1_555 O ? R HOH . ? A HOH 205 ? 1_555 144.5 ? 10 O ? R HOH . ? A HOH 204 ? 1_555 SR ? B SR . ? A SR 101 ? 1_555 O ? R HOH . ? A HOH 205 ? 1_555 76.8 ? 11 OP2 ? A A 15 ? A A 14 ? 1_555 SR ? B SR . ? A SR 101 ? 1_555 O ? R HOH . ? A HOH 209 ? 1_555 105.9 ? 12 N7 ? A G 16 ? A G 15 ? 1_555 SR ? B SR . ? A SR 101 ? 1_555 O ? R HOH . ? A HOH 209 ? 1_555 168.7 ? 13 O6 ? A G 16 ? A G 15 ? 1_555 SR ? B SR . ? A SR 101 ? 1_555 O ? R HOH . ? A HOH 209 ? 1_555 103.4 ? 14 O ? R HOH . ? A HOH 204 ? 1_555 SR ? B SR . ? A SR 101 ? 1_555 O ? R HOH . ? A HOH 209 ? 1_555 95.5 ? 15 O ? R HOH . ? A HOH 205 ? 1_555 SR ? B SR . ? A SR 101 ? 1_555 O ? R HOH . ? A HOH 209 ? 1_555 104.3 ? 16 O4 ? A U 36 ? A U 35 ? 1_555 SR ? I SR . ? A SR 108 ? 7_466 OP1 ? A G 85 ? A G 84 ? 1_555 108.9 ? 17 OP1 ? A G 46 ? A G 45 ? 1_555 SR ? H SR . ? A SR 107 ? 1_555 OP1 ? A C 86 ? A C 85 ? 1_555 77.1 ? 18 N7 ? A G 93 ? A G 92 ? 1_555 SR ? G SR . ? A SR 106 ? 1_555 O6 ? A G 93 ? A G 92 ? 1_555 69.9 ? 19 N7 ? A G 93 ? A G 92 ? 1_555 SR ? G SR . ? A SR 106 ? 1_555 O ? R HOH . ? A HOH 201 ? 1_555 77.0 ? 20 O6 ? A G 93 ? A G 92 ? 1_555 SR ? G SR . ? A SR 106 ? 1_555 O ? R HOH . ? A HOH 201 ? 1_555 53.8 ? 21 O ? R HOH . ? A HOH 212 ? 4_445 MG ? L MG . ? A MG 111 ? 1_555 O ? R HOH . ? A HOH 213 ? 1_555 92.8 ? 22 O ? R HOH . ? A HOH 212 ? 4_445 MG ? L MG . ? A MG 111 ? 1_555 O ? R HOH . ? A HOH 214 ? 1_555 86.4 ? 23 O ? R HOH . ? A HOH 213 ? 1_555 MG ? L MG . ? A MG 111 ? 1_555 O ? R HOH . ? A HOH 214 ? 1_555 88.4 ? 24 O ? R HOH . ? A HOH 212 ? 4_445 MG ? L MG . ? A MG 111 ? 1_555 O ? R HOH . ? A HOH 216 ? 1_555 179.8 ? 25 O ? R HOH . ? A HOH 213 ? 1_555 MG ? L MG . ? A MG 111 ? 1_555 O ? R HOH . ? A HOH 216 ? 1_555 87.2 ? 26 O ? R HOH . ? A HOH 214 ? 1_555 MG ? L MG . ? A MG 111 ? 1_555 O ? R HOH . ? A HOH 216 ? 1_555 93.8 ? 27 O ? R HOH . ? A HOH 212 ? 4_445 MG ? L MG . ? A MG 111 ? 1_555 O ? R HOH . ? A HOH 217 ? 4_445 93.3 ? 28 O ? R HOH . ? A HOH 213 ? 1_555 MG ? L MG . ? A MG 111 ? 1_555 O ? R HOH . ? A HOH 217 ? 4_445 91.8 ? 29 O ? R HOH . ? A HOH 214 ? 1_555 MG ? L MG . ? A MG 111 ? 1_555 O ? R HOH . ? A HOH 217 ? 4_445 179.6 ? 30 O ? R HOH . ? A HOH 216 ? 1_555 MG ? L MG . ? A MG 111 ? 1_555 O ? R HOH . ? A HOH 217 ? 4_445 86.6 ? 31 O ? R HOH . ? A HOH 212 ? 4_445 MG ? L MG . ? A MG 111 ? 1_555 O ? R HOH . ? A HOH 218 ? 7_466 87.4 ? 32 O ? R HOH . ? A HOH 213 ? 1_555 MG ? L MG . ? A MG 111 ? 1_555 O ? R HOH . ? A HOH 218 ? 7_466 179.8 ? 33 O ? R HOH . ? A HOH 214 ? 1_555 MG ? L MG . ? A MG 111 ? 1_555 O ? R HOH . ? A HOH 218 ? 7_466 91.7 ? 34 O ? R HOH . ? A HOH 216 ? 1_555 MG ? L MG . ? A MG 111 ? 1_555 O ? R HOH . ? A HOH 218 ? 7_466 92.7 ? 35 O ? R HOH . ? A HOH 217 ? 4_445 MG ? L MG . ? A MG 111 ? 1_555 O ? R HOH . ? A HOH 218 ? 7_466 88.1 ? 36 O ? R HOH . ? A HOH 202 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? R HOH . ? A HOH 206 ? 1_555 179.8 ? 37 O ? R HOH . ? A HOH 202 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? R HOH . ? A HOH 207 ? 1_555 89.5 ? 38 O ? R HOH . ? A HOH 206 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? R HOH . ? A HOH 207 ? 1_555 90.6 ? 39 O ? R HOH . ? A HOH 202 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? R HOH . ? A HOH 210 ? 1_555 93.0 ? 40 O ? R HOH . ? A HOH 206 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? R HOH . ? A HOH 210 ? 1_555 86.8 ? 41 O ? R HOH . ? A HOH 207 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? R HOH . ? A HOH 210 ? 1_555 87.2 ? 42 O ? R HOH . ? A HOH 202 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? R HOH . ? A HOH 211 ? 1_555 86.9 ? 43 O ? R HOH . ? A HOH 206 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? R HOH . ? A HOH 211 ? 1_555 93.3 ? 44 O ? R HOH . ? A HOH 207 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? R HOH . ? A HOH 211 ? 1_555 92.7 ? 45 O ? R HOH . ? A HOH 210 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? R HOH . ? A HOH 211 ? 1_555 179.8 ? 46 O ? R HOH . ? A HOH 202 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? R HOH . ? A HOH 215 ? 1_555 90.4 ? 47 O ? R HOH . ? A HOH 206 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? R HOH . ? A HOH 215 ? 1_555 89.6 ? 48 O ? R HOH . ? A HOH 207 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? R HOH . ? A HOH 215 ? 1_555 179.8 ? 49 O ? R HOH . ? A HOH 210 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? R HOH . ? A HOH 215 ? 1_555 93.0 ? 50 O ? R HOH . ? A HOH 211 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? R HOH . ? A HOH 215 ? 1_555 87.2 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SR 101 ? 6 'binding site for residue SR A 101' AC2 Software A SR 102 ? 1 'binding site for residue SR A 102' AC3 Software A SR 103 ? 4 'binding site for residue SR A 103' AC4 Software A SR 104 ? 4 'binding site for residue SR A 104' AC5 Software A SR 106 ? 4 'binding site for residue SR A 106' AC6 Software A SR 107 ? 3 'binding site for residue SR A 107' AC7 Software A SR 108 ? 2 'binding site for residue SR A 108' AC8 Software A SR 109 ? 1 'binding site for residue SR A 109' AC9 Software A SPK 110 ? 7 'binding site for residue SPK A 110' AD1 Software A MG 111 ? 6 'binding site for residue MG A 111' AD2 Software A MG 112 ? 7 'binding site for residue MG A 112' AD3 Software A IRI 113 ? 7 'binding site for residue IRI A 113' AD4 Software A IRI 114 ? 5 'binding site for residue IRI A 114' AD5 Software A IRI 115 ? 5 'binding site for residue IRI A 115' AD6 Software A GAI 116 ? 6 'binding site for residue GAI A 116' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 A A 15 ? A A 14 . ? 1_555 ? 2 AC1 6 G A 16 ? G A 15 . ? 1_555 ? 3 AC1 6 SPK K . ? SPK A 110 . ? 1_555 ? 4 AC1 6 HOH R . ? HOH A 204 . ? 1_555 ? 5 AC1 6 HOH R . ? HOH A 205 . ? 1_555 ? 6 AC1 6 HOH R . ? HOH A 209 . ? 1_555 ? 7 AC2 1 G A 77 ? G A 76 . ? 1_555 ? 8 AC3 4 A A 45 ? A A 44 . ? 1_555 ? 9 AC3 4 G A 46 ? G A 45 . ? 1_555 ? 10 AC3 4 C A 86 ? C A 85 . ? 1_555 ? 11 AC3 4 C A 87 ? C A 86 . ? 1_555 ? 12 AC4 4 G A 18 ? G A 17 . ? 1_555 ? 13 AC4 4 U A 19 ? U A 18 . ? 1_555 ? 14 AC4 4 G A 39 ? G A 38 . ? 1_555 ? 15 AC4 4 SPK K . ? SPK A 110 . ? 1_555 ? 16 AC5 4 G A 91 ? G A 90 . ? 1_555 ? 17 AC5 4 A A 92 ? A A 91 . ? 1_555 ? 18 AC5 4 G A 93 ? G A 92 . ? 1_555 ? 19 AC5 4 HOH R . ? HOH A 201 . ? 1_555 ? 20 AC6 3 G A 46 ? G A 45 . ? 1_555 ? 21 AC6 3 C A 86 ? C A 85 . ? 1_555 ? 22 AC6 3 C A 87 ? C A 86 . ? 1_555 ? 23 AC7 2 U A 36 ? U A 35 . ? 7_466 ? 24 AC7 2 G A 85 ? G A 84 . ? 1_555 ? 25 AC8 1 G A 8 ? G A 7 . ? 1_555 ? 26 AC9 7 G A 17 ? G A 16 . ? 7_466 ? 27 AC9 7 G A 17 ? G A 16 . ? 1_555 ? 28 AC9 7 G A 18 ? G A 17 . ? 1_555 ? 29 AC9 7 G A 39 ? G A 38 . ? 1_555 ? 30 AC9 7 SR B . ? SR A 101 . ? 1_555 ? 31 AC9 7 SR E . ? SR A 104 . ? 1_555 ? 32 AC9 7 HOH R . ? HOH A 204 . ? 1_555 ? 33 AD1 6 HOH R . ? HOH A 212 . ? 4_445 ? 34 AD1 6 HOH R . ? HOH A 213 . ? 1_555 ? 35 AD1 6 HOH R . ? HOH A 214 . ? 1_555 ? 36 AD1 6 HOH R . ? HOH A 216 . ? 1_555 ? 37 AD1 6 HOH R . ? HOH A 217 . ? 4_445 ? 38 AD1 6 HOH R . ? HOH A 218 . ? 7_466 ? 39 AD2 7 A A 71 ? A A 70 . ? 1_555 ? 40 AD2 7 HOH R . ? HOH A 202 . ? 1_555 ? 41 AD2 7 HOH R . ? HOH A 206 . ? 1_555 ? 42 AD2 7 HOH R . ? HOH A 207 . ? 1_555 ? 43 AD2 7 HOH R . ? HOH A 210 . ? 1_555 ? 44 AD2 7 HOH R . ? HOH A 211 . ? 1_555 ? 45 AD2 7 HOH R . ? HOH A 215 . ? 1_555 ? 46 AD3 7 C A 49 ? C A 48 . ? 5_445 ? 47 AD3 7 A A 50 ? A A 49 . ? 5_445 ? 48 AD3 7 C A 56 ? C A 55 . ? 1_555 ? 49 AD3 7 U A 57 ? U A 56 . ? 1_555 ? 50 AD3 7 U A 58 ? U A 57 . ? 1_555 ? 51 AD3 7 U A 59 ? U A 58 . ? 1_555 ? 52 AD3 7 C A 62 ? C A 61 . ? 1_555 ? 53 AD4 5 G A 25 ? G A 24 . ? 1_555 ? 54 AD4 5 U A 26 ? U A 25 . ? 1_555 ? 55 AD4 5 G A 31 ? G A 30 . ? 1_555 ? 56 AD4 5 G A 32 ? G A 31 . ? 1_555 ? 57 AD4 5 U A 33 ? U A 32 . ? 1_555 ? 58 AD5 5 G A 12 ? G A 11 . ? 1_555 ? 59 AD5 5 C A 13 ? C A 12 . ? 1_555 ? 60 AD5 5 C A 43 ? C A 42 . ? 1_555 ? 61 AD5 5 A A 44 ? A A 43 . ? 1_555 ? 62 AD5 5 A A 45 ? A A 44 . ? 1_555 ? 63 AD6 6 G A 46 ? G A 45 . ? 1_555 ? 64 AD6 6 A A 47 ? A A 46 . ? 1_555 ? 65 AD6 6 G A 73 ? G A 72 . ? 1_555 ? 66 AD6 6 G A 74 ? G A 73 . ? 1_555 ? 67 AD6 6 G A 89 ? G A 88 . ? 1_555 ? 68 AD6 6 G A 91 ? G A 90 . ? 1_555 ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 "O2'" _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 G _pdbx_validate_symm_contact.auth_seq_id_1 47 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 "O2'" _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 A _pdbx_validate_symm_contact.auth_seq_id_2 60 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 5_455 _pdbx_validate_symm_contact.dist 2.01 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" A G 17 ? ? P A G 17 ? ? OP2 A G 17 ? ? 97.38 105.70 -8.32 0.90 N 2 1 "C2'" A A 43 ? ? "C3'" A A 43 ? ? "O3'" A A 43 ? ? 123.38 113.70 9.68 1.60 N 3 1 "O5'" A A 44 ? ? P A A 44 ? ? OP2 A A 44 ? ? 100.26 105.70 -5.44 0.90 N 4 1 "O5'" A G 47 ? ? P A G 47 ? ? OP2 A G 47 ? ? 98.75 105.70 -6.95 0.90 N 5 1 "O5'" A A 49 ? ? P A A 49 ? ? OP2 A A 49 ? ? 96.28 105.70 -9.42 0.90 N 6 1 "O5'" A C 61 ? ? P A C 61 ? ? OP2 A C 61 ? ? 99.23 105.70 -6.47 0.90 N 7 1 "O5'" A G 72 ? ? P A G 72 ? ? OP2 A G 72 ? ? 98.31 105.70 -7.39 0.90 N 8 1 "O5'" A G 73 ? ? P A G 73 ? ? OP1 A G 73 ? ? 98.58 105.70 -7.12 0.90 N 9 1 "C2'" A A 80 ? ? "C3'" A A 80 ? ? "O3'" A A 80 ? ? 127.13 113.70 13.43 1.60 N 10 1 "O5'" A A 93 ? ? P A A 93 ? ? OP2 A A 93 ? ? 118.18 110.70 7.48 1.20 N # _phasing.method MAD # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A G 0 ? A G 1 2 1 Y 1 A U 1 ? A U 2 3 1 Y 1 A C 2 ? A C 3 4 1 Y 1 A U 3 ? A U 4 5 1 Y 1 A A 4 ? A A 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 GAI C C N N 111 GAI N1 N N N 112 GAI N2 N N N 113 GAI N3 N N N 114 GAI HN1 H N N 115 GAI HN21 H N N 116 GAI HN22 H N N 117 GAI HN31 H N N 118 GAI HN32 H N N 119 HOH O O N N 120 HOH H1 H N N 121 HOH H2 H N N 122 IRI IR IR N N 123 IRI N1 N N N 124 IRI N2 N N N 125 IRI N3 N N N 126 IRI N4 N N N 127 IRI N5 N N N 128 IRI N6 N N N 129 IRI HN11 H N N 130 IRI HN12 H N N 131 IRI HN13 H N N 132 IRI HN21 H N N 133 IRI HN22 H N N 134 IRI HN23 H N N 135 IRI HN31 H N N 136 IRI HN32 H N N 137 IRI HN33 H N N 138 IRI HN41 H N N 139 IRI HN42 H N N 140 IRI HN43 H N N 141 IRI HN51 H N N 142 IRI HN52 H N N 143 IRI HN53 H N N 144 IRI HN61 H N N 145 IRI HN62 H N N 146 IRI HN63 H N N 147 MG MG MG N N 148 SPK N1 N N N 149 SPK C2 C N N 150 SPK C3 C N N 151 SPK C4 C N N 152 SPK N5 N N N 153 SPK C6 C N N 154 SPK C7 C N N 155 SPK C8 C N N 156 SPK C9 C N N 157 SPK N10 N N N 158 SPK C11 C N N 159 SPK C12 C N N 160 SPK C13 C N N 161 SPK N14 N N N 162 SPK H1A H N N 163 SPK H1B H N N 164 SPK H1C H N N 165 SPK H2A H N N 166 SPK H2B H N N 167 SPK H3A H N N 168 SPK H3B H N N 169 SPK H4A H N N 170 SPK H4B H N N 171 SPK H5A H N N 172 SPK H5B H N N 173 SPK H6A H N N 174 SPK H6B H N N 175 SPK H7A H N N 176 SPK H7B H N N 177 SPK H8A H N N 178 SPK H8B H N N 179 SPK H9A H N N 180 SPK H9B H N N 181 SPK H101 H N N 182 SPK H102 H N N 183 SPK H111 H N N 184 SPK H112 H N N 185 SPK H121 H N N 186 SPK H122 H N N 187 SPK H131 H N N 188 SPK H132 H N N 189 SPK H141 H N N 190 SPK H142 H N N 191 SPK H143 H N N 192 SR SR SR N N 193 U OP3 O N N 194 U P P N N 195 U OP1 O N N 196 U OP2 O N N 197 U "O5'" O N N 198 U "C5'" C N N 199 U "C4'" C N R 200 U "O4'" O N N 201 U "C3'" C N S 202 U "O3'" O N N 203 U "C2'" C N R 204 U "O2'" O N N 205 U "C1'" C N R 206 U N1 N N N 207 U C2 C N N 208 U O2 O N N 209 U N3 N N N 210 U C4 C N N 211 U O4 O N N 212 U C5 C N N 213 U C6 C N N 214 U HOP3 H N N 215 U HOP2 H N N 216 U "H5'" H N N 217 U "H5''" H N N 218 U "H4'" H N N 219 U "H3'" H N N 220 U "HO3'" H N N 221 U "H2'" H N N 222 U "HO2'" H N N 223 U "H1'" H N N 224 U H3 H N N 225 U H5 H N N 226 U H6 H N N 227 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 GAI C N1 doub N N 116 GAI C N2 sing N N 117 GAI C N3 sing N N 118 GAI N1 HN1 sing N N 119 GAI N2 HN21 sing N N 120 GAI N2 HN22 sing N N 121 GAI N3 HN31 sing N N 122 GAI N3 HN32 sing N N 123 HOH O H1 sing N N 124 HOH O H2 sing N N 125 IRI IR N1 sing N N 126 IRI IR N2 sing N N 127 IRI IR N3 sing N N 128 IRI IR N4 sing N N 129 IRI IR N5 sing N N 130 IRI IR N6 sing N N 131 IRI N1 HN11 sing N N 132 IRI N1 HN12 sing N N 133 IRI N1 HN13 sing N N 134 IRI N2 HN21 sing N N 135 IRI N2 HN22 sing N N 136 IRI N2 HN23 sing N N 137 IRI N3 HN31 sing N N 138 IRI N3 HN32 sing N N 139 IRI N3 HN33 sing N N 140 IRI N4 HN41 sing N N 141 IRI N4 HN42 sing N N 142 IRI N4 HN43 sing N N 143 IRI N5 HN51 sing N N 144 IRI N5 HN52 sing N N 145 IRI N5 HN53 sing N N 146 IRI N6 HN61 sing N N 147 IRI N6 HN62 sing N N 148 IRI N6 HN63 sing N N 149 SPK N1 C2 sing N N 150 SPK N1 H1A sing N N 151 SPK N1 H1B sing N N 152 SPK N1 H1C sing N N 153 SPK C2 C3 sing N N 154 SPK C2 H2A sing N N 155 SPK C2 H2B sing N N 156 SPK C3 C4 sing N N 157 SPK C3 H3A sing N N 158 SPK C3 H3B sing N N 159 SPK C4 N5 sing N N 160 SPK C4 H4A sing N N 161 SPK C4 H4B sing N N 162 SPK N5 C6 sing N N 163 SPK N5 H5A sing N N 164 SPK N5 H5B sing N N 165 SPK C6 C7 sing N N 166 SPK C6 H6A sing N N 167 SPK C6 H6B sing N N 168 SPK C7 C8 sing N N 169 SPK C7 H7A sing N N 170 SPK C7 H7B sing N N 171 SPK C8 C9 sing N N 172 SPK C8 H8A sing N N 173 SPK C8 H8B sing N N 174 SPK C9 N10 sing N N 175 SPK C9 H9A sing N N 176 SPK C9 H9B sing N N 177 SPK N10 C11 sing N N 178 SPK N10 H101 sing N N 179 SPK N10 H102 sing N N 180 SPK C11 C12 sing N N 181 SPK C11 H111 sing N N 182 SPK C11 H112 sing N N 183 SPK C12 C13 sing N N 184 SPK C12 H121 sing N N 185 SPK C12 H122 sing N N 186 SPK C13 N14 sing N N 187 SPK C13 H131 sing N N 188 SPK C13 H132 sing N N 189 SPK N14 H141 sing N N 190 SPK N14 H142 sing N N 191 SPK N14 H143 sing N N 192 U OP3 P sing N N 193 U OP3 HOP3 sing N N 194 U P OP1 doub N N 195 U P OP2 sing N N 196 U P "O5'" sing N N 197 U OP2 HOP2 sing N N 198 U "O5'" "C5'" sing N N 199 U "C5'" "C4'" sing N N 200 U "C5'" "H5'" sing N N 201 U "C5'" "H5''" sing N N 202 U "C4'" "O4'" sing N N 203 U "C4'" "C3'" sing N N 204 U "C4'" "H4'" sing N N 205 U "O4'" "C1'" sing N N 206 U "C3'" "O3'" sing N N 207 U "C3'" "C2'" sing N N 208 U "C3'" "H3'" sing N N 209 U "O3'" "HO3'" sing N N 210 U "C2'" "O2'" sing N N 211 U "C2'" "C1'" sing N N 212 U "C2'" "H2'" sing N N 213 U "O2'" "HO2'" sing N N 214 U "C1'" N1 sing N N 215 U "C1'" "H1'" sing N N 216 U N1 C2 sing N N 217 U N1 C6 sing N N 218 U C2 O2 doub N N 219 U C2 N3 sing N N 220 U N3 C4 sing N N 221 U N3 H3 sing N N 222 U C4 O4 doub N N 223 U C4 C5 sing N N 224 U C5 C6 doub N N 225 U C5 H5 sing N N 226 U C6 H6 sing N N 227 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5T83 'double helix' 5T83 'a-form double helix' 5T83 'hairpin loop' 5T83 'bulge loop' 5T83 'mismatched base pair' 5T83 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A A 7 1_555 A A 69 1_555 4.099 -3.396 1.372 -30.905 -5.254 -57.519 1 A_A6:A68_A A 6 ? A 68 ? ? 6 1 A G 90 1_555 A C 70 1_555 0.139 0.045 -0.475 -24.285 -25.049 0.577 2 A_G89:C69_A A 89 ? A 69 ? 19 1 1 A G 46 1_555 A A 71 1_555 -2.878 -7.212 1.197 -51.004 -13.791 -151.704 3 A_G45:A70_A A 45 ? A 70 ? ? 12 1 A A 30 1_555 A A 28 1_555 -1.463 -1.615 -0.254 12.797 -14.234 163.950 4 A_A29:A27_A A 29 ? A 27 ? 1 2 1 A G 31 1_555 A C 27 1_555 -0.014 -0.175 0.224 -1.442 -7.950 -0.699 5 A_G30:C26_A A 30 ? A 26 ? 19 1 1 A G 32 1_555 A U 26 1_555 -2.553 -0.578 0.117 -1.325 -20.162 2.931 6 A_G31:U25_A A 31 ? A 25 ? 28 1 1 A U 33 1_555 A G 25 1_555 1.957 -0.559 0.254 -2.545 -18.762 -1.826 7 A_U32:G24_A A 32 ? A 24 ? 28 1 1 A G 34 1_555 A C 24 1_555 -0.455 -0.206 0.305 -7.300 -16.138 -4.645 8 A_G33:C23_A A 33 ? A 23 ? 19 1 1 A C 37 1_555 A G 23 1_555 -0.009 -0.041 0.227 -9.454 -14.680 3.168 9 A_C36:G22_A A 36 ? A 22 ? 19 1 1 A G 39 1_555 A C 22 1_555 -0.401 -0.149 0.066 3.991 -6.931 2.162 10 A_G38:C21_A A 38 ? A 21 ? 19 1 1 A G 40 1_555 A C 21 1_555 -0.520 -0.422 -0.363 -7.979 -1.968 2.526 11 A_G39:C20_A A 39 ? A 20 ? 19 1 1 A U 41 1_555 A G 18 1_555 -3.729 0.923 -0.571 20.388 -5.485 -49.279 12 A_U40:G17_A A 40 ? A 17 ? ? ? 1 A C 42 1_555 A G 17 1_555 -0.331 0.207 -0.404 17.216 -11.202 -0.406 13 A_C41:G16_A A 41 ? A 16 ? 19 1 1 A C 43 1_555 A G 16 1_555 0.055 -0.119 0.101 8.037 -13.195 2.582 14 A_C42:G15_A A 42 ? A 15 ? 19 1 1 A A 44 1_555 A A 15 1_555 6.388 -4.494 -0.249 0.274 -11.720 -20.070 15 A_A43:A14_A A 43 ? A 14 ? ? 10 1 A A 45 1_555 A U 14 1_555 -4.253 -2.088 -0.457 2.990 -13.341 -98.630 16 A_A44:U13_A A 44 ? A 13 ? 24 4 1 A G 48 1_555 A C 13 1_555 0.223 -0.076 -0.105 -1.114 -11.134 -2.752 17 A_G47:C12_A A 47 ? A 12 ? 19 1 1 A C 49 1_555 A G 12 1_555 0.044 -0.185 -0.153 4.967 -17.224 -2.311 18 A_C48:G11_A A 48 ? A 11 ? 19 1 1 A A 50 1_555 A U 11 1_555 0.276 -0.227 0.102 1.810 -10.609 -1.539 19 A_A49:U10_A A 49 ? A 10 ? 20 1 1 A A 51 1_555 A U 10 1_555 -0.183 -0.169 0.178 -1.249 -13.945 0.587 20 A_A50:U9_A A 50 ? A 9 ? 20 1 1 A A 52 1_555 A U 9 1_555 0.372 -0.186 0.593 7.279 -11.046 -1.507 21 A_A51:U8_A A 51 ? A 8 ? 20 1 1 A C 53 1_555 A G 8 1_555 0.692 0.044 0.469 4.698 -5.217 1.595 22 A_C52:G7_A A 52 ? A 7 ? 19 1 1 A G 54 1_555 A C 68 1_555 -0.343 -0.363 0.360 5.947 -0.857 -0.488 23 A_G53:C67_A A 53 ? A 67 ? 19 1 1 A G 55 1_555 A C 67 1_555 -0.468 -0.365 -0.108 3.831 -16.490 1.144 24 A_G54:C66_A A 54 ? A 66 ? 19 1 1 A C 56 1_555 A G 66 1_555 -0.147 -0.153 0.040 0.751 -20.546 -7.665 25 A_C55:G65_A A 55 ? A 65 ? 19 1 1 A U 57 1_555 A A 65 1_555 0.752 0.244 0.301 -16.855 -14.265 8.698 26 A_U56:A64_A A 56 ? A 64 ? ? ? 1 A U 58 1_555 A A 64 1_555 4.925 -1.092 0.814 -7.426 -7.092 4.571 27 A_U57:A63_A A 57 ? A 63 ? ? ? 1 A C 72 1_555 A G 93 1_555 -0.422 0.224 0.411 -5.344 -0.167 7.761 28 A_C71:G92_A A 71 ? A 92 ? 19 1 1 A G 73 1_555 A A 92 1_555 6.995 -4.187 0.429 2.680 7.083 -4.854 29 A_G72:A91_A A 72 ? A 91 ? 11 10 1 A G 74 1_555 A G 91 1_555 -5.653 -0.139 -0.142 -11.570 -16.305 -118.294 30 A_G73:G90_A A 73 ? A 90 ? 7 4 1 A A 75 1_555 A G 89 1_555 2.573 -6.428 -0.370 8.453 -8.805 157.868 31 A_A74:G88_A A 74 ? A 88 ? ? ? 1 A A 76 1_555 A U 88 1_555 -5.052 -0.749 -0.187 -4.200 -10.630 11.103 32 A_A75:U87_A A 75 ? A 87 ? ? ? 1 A G 77 1_555 A C 87 1_555 0.683 0.474 0.777 -1.194 -14.882 7.449 33 A_G76:C86_A A 76 ? A 86 ? ? 1 1 A G 78 1_555 A C 86 1_555 -0.122 0.106 0.020 -12.950 -14.159 3.925 34 A_G77:C85_A A 77 ? A 85 ? 19 1 1 A A 79 1_555 A A 84 1_555 4.394 1.065 0.004 -0.078 -4.374 -95.705 35 A_A78:A83_A A 78 ? A 83 ? ? ? 1 A U 80 1_555 A A 83 1_555 4.491 -2.000 -0.382 27.966 -15.896 -94.921 36 A_U79:A82_A A 79 ? A 82 ? 24 4 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A A 7 1_555 A A 69 1_555 A G 90 1_555 A C 70 1_555 0.979 -2.535 1.646 -134.478 -109.984 -176.117 1.285 0.468 1.616 54.993 -67.241 -179.788 1 AA_A6G89:C69A68_AA A 6 ? A 68 ? A 89 ? A 69 ? 1 A G 90 1_555 A C 70 1_555 A G 46 1_555 A A 71 1_555 1.020 -4.709 -3.193 159.848 38.674 -3.130 2.741 -0.996 0.028 -21.114 87.269 -164.466 2 AA_G89G45:A70C69_AA A 89 ? A 69 ? A 45 ? A 70 ? 1 A A 30 1_555 A A 28 1_555 A G 31 1_555 A C 27 1_555 0.291 0.093 3.122 -7.545 -3.756 120.076 0.087 -0.236 3.107 -2.166 4.352 120.254 3 AA_A29G30:C26A27_AA A 29 ? A 27 ? A 30 ? A 26 ? 1 A G 31 1_555 A C 27 1_555 A G 32 1_555 A U 26 1_555 0.346 -1.930 3.036 -3.332 7.936 23.238 -6.491 -1.643 2.196 18.891 7.932 24.760 4 AA_G30G31:U25C26_AA A 30 ? A 26 ? A 31 ? A 25 ? 1 A G 32 1_555 A U 26 1_555 A U 33 1_555 A G 25 1_555 0.194 -1.066 3.304 -1.412 5.789 51.031 -1.624 -0.319 3.168 6.693 1.633 51.354 5 AA_G31U32:G24U25_AA A 31 ? A 25 ? A 32 ? A 24 ? 1 A U 33 1_555 A G 25 1_555 A G 34 1_555 A C 24 1_555 -0.945 -2.394 3.127 0.994 11.998 23.340 -7.800 2.291 1.673 27.439 -2.273 26.224 6 AA_U32G33:C23G24_AA A 32 ? A 24 ? A 33 ? A 23 ? 1 A G 34 1_555 A C 24 1_555 A C 37 1_555 A G 23 1_555 -1.115 -1.419 3.182 0.975 3.307 50.804 -1.872 1.362 3.070 3.849 -1.135 50.913 7 AA_G33C36:G22C23_AA A 33 ? A 23 ? A 36 ? A 22 ? 1 A C 37 1_555 A G 23 1_555 A G 39 1_555 A C 22 1_555 -2.572 -1.314 3.129 7.857 4.941 44.656 -2.076 3.923 2.514 6.421 -10.210 45.562 8 AA_C36G38:C21G22_AA A 36 ? A 22 ? A 38 ? A 21 ? 1 A G 39 1_555 A C 22 1_555 A G 40 1_555 A C 21 1_555 -0.572 -2.284 3.444 -1.643 5.981 33.464 -4.857 0.716 3.027 10.277 2.824 34.018 9 AA_G38G39:C20C21_AA A 38 ? A 21 ? A 39 ? A 20 ? 1 A G 40 1_555 A C 21 1_555 A U 41 1_555 A G 18 1_555 2.943 -2.125 2.954 -13.745 3.848 63.041 -2.123 -3.227 2.219 3.631 12.969 64.474 10 AA_G39U40:G17C20_AA A 39 ? A 20 ? A 40 ? A 17 ? 1 A U 41 1_555 A G 18 1_555 A C 42 1_555 A G 17 1_555 2.038 -1.660 3.528 -6.612 6.824 44.319 -2.764 -3.236 2.937 8.924 8.646 45.276 11 AA_U40C41:G16G17_AA A 40 ? A 17 ? A 41 ? A 16 ? 1 A C 42 1_555 A G 17 1_555 A C 43 1_555 A G 16 1_555 -0.413 -2.259 3.512 -7.173 8.056 32.796 -5.074 -0.426 2.916 13.810 12.296 34.478 12 AA_C41C42:G15G16_AA A 41 ? A 16 ? A 42 ? A 15 ? 1 A C 43 1_555 A G 16 1_555 A A 44 1_555 A A 15 1_555 -2.013 -1.039 3.670 3.144 5.620 58.534 -1.374 2.226 3.463 5.729 -3.205 58.856 13 AA_C42A43:A14G15_AA A 42 ? A 15 ? A 43 ? A 14 ? 1 A A 44 1_555 A A 15 1_555 A A 45 1_555 A U 14 1_555 -4.244 -0.459 3.388 -2.384 1.929 -7.062 -1.731 -37.972 1.911 -14.778 -18.264 -7.699 14 AA_A43A44:U13A14_AA A 43 ? A 14 ? A 44 ? A 13 ? 1 A A 45 1_555 A U 14 1_555 A G 48 1_555 A C 13 1_555 3.275 -2.811 3.524 1.786 4.124 74.387 -2.459 -2.646 3.453 3.408 -1.476 74.503 15 AA_A44G47:C12U13_AA A 44 ? A 13 ? A 47 ? A 12 ? 1 A G 48 1_555 A C 13 1_555 A C 49 1_555 A G 12 1_555 -0.661 -1.639 3.148 -0.531 1.565 32.101 -3.227 1.104 3.077 2.827 0.960 32.142 16 AA_G47C48:G11C12_AA A 47 ? A 12 ? A 48 ? A 11 ? 1 A C 49 1_555 A G 12 1_555 A A 50 1_555 A U 11 1_555 0.158 -1.639 3.349 0.200 6.877 32.046 -4.060 -0.247 2.944 12.280 -0.358 32.757 17 AA_C48A49:U10G11_AA A 48 ? A 11 ? A 49 ? A 10 ? 1 A A 50 1_555 A U 11 1_555 A A 51 1_555 A U 10 1_555 0.179 -1.350 3.318 2.425 6.482 28.940 -3.951 0.146 2.957 12.742 -4.767 29.739 18 AA_A49A50:U9U10_AA A 49 ? A 10 ? A 50 ? A 9 ? 1 A A 51 1_555 A U 10 1_555 A A 52 1_555 A U 9 1_555 -0.045 -1.436 2.909 -0.851 1.205 37.219 -2.389 -0.029 2.863 1.887 1.333 37.247 19 AA_A50A51:U8U9_AA A 50 ? A 9 ? A 51 ? A 8 ? 1 A A 52 1_555 A U 9 1_555 A C 53 1_555 A G 8 1_555 0.766 -1.865 3.265 1.621 1.527 29.529 -3.968 -1.159 3.204 2.990 -3.174 29.611 20 AA_A51C52:G7U8_AA A 51 ? A 8 ? A 52 ? A 7 ? 1 A C 53 1_555 A G 8 1_555 A G 54 1_555 A C 68 1_555 3.333 -1.595 3.118 0.576 -2.356 50.585 -1.704 -3.857 3.220 -2.756 -0.674 50.639 21 AA_C52G53:C67G7_AA A 52 ? A 7 ? A 53 ? A 67 ? 1 A G 54 1_555 A C 68 1_555 A G 55 1_555 A C 67 1_555 -0.311 -1.596 3.212 -0.702 11.453 34.437 -4.026 0.411 2.574 18.713 1.147 36.244 22 AA_G53G54:C66C67_AA A 53 ? A 67 ? A 54 ? A 66 ? 1 A G 55 1_555 A C 67 1_555 A C 56 1_555 A G 66 1_555 -0.501 -1.347 3.257 -3.294 4.472 35.120 -2.845 0.351 3.100 7.354 5.417 35.543 23 AA_G54C55:G65C66_AA A 54 ? A 66 ? A 55 ? A 65 ? 1 A C 56 1_555 A G 66 1_555 A U 57 1_555 A A 65 1_555 0.536 -1.590 3.594 1.090 14.294 40.519 -3.634 -0.622 2.910 19.902 -1.518 42.879 24 AA_C55U56:A64G65_AA A 55 ? A 65 ? A 56 ? A 64 ? 1 A U 57 1_555 A A 65 1_555 A U 58 1_555 A A 64 1_555 -0.021 -0.739 3.180 1.127 8.295 43.599 -1.712 0.127 2.996 11.047 -1.501 44.357 25 AA_U56U57:A63A64_AA A 56 ? A 64 ? A 57 ? A 63 ? 1 A C 72 1_555 A G 93 1_555 A G 73 1_555 A A 92 1_555 -1.616 -1.077 2.936 -1.868 -1.251 60.646 -1.011 1.518 2.999 -1.238 1.849 60.684 26 AA_C71G72:A91G92_AA A 71 ? A 92 ? A 72 ? A 91 ? 1 A G 73 1_555 A A 92 1_555 A G 74 1_555 A G 91 1_555 -5.918 -1.136 3.163 -2.589 -7.832 -14.379 7.836 -21.827 1.293 28.436 -9.402 -16.566 27 AA_G72G73:G90A91_AA A 72 ? A 91 ? A 73 ? A 90 ? 1 A G 74 1_555 A G 91 1_555 A A 75 1_555 A G 89 1_555 2.172 0.825 3.459 2.969 6.574 -79.867 -0.821 1.769 3.326 -5.111 2.308 -80.138 28 AA_G73A74:G88G90_AA A 73 ? A 90 ? A 74 ? A 88 ? 1 A A 75 1_555 A G 89 1_555 A A 76 1_555 A U 88 1_555 0.980 -0.015 3.236 -4.722 -1.102 119.595 0.002 -0.611 3.212 -0.637 2.731 119.654 29 AA_A74A75:U87G88_AA A 74 ? A 88 ? A 75 ? A 87 ? 1 A A 76 1_555 A U 88 1_555 A G 77 1_555 A C 87 1_555 0.165 -1.069 3.170 -8.463 4.255 50.975 -1.497 -0.733 3.016 4.895 9.737 51.790 30 AA_A75G76:C86U87_AA A 75 ? A 87 ? A 76 ? A 86 ? 1 A G 77 1_555 A C 87 1_555 A G 78 1_555 A C 86 1_555 -0.368 -2.030 3.232 6.198 6.095 33.676 -4.261 1.494 2.725 10.308 -10.482 34.748 31 AA_G76G77:C85C86_AA A 76 ? A 86 ? A 77 ? A 85 ? 1 A G 78 1_555 A C 86 1_555 A A 79 1_555 A A 84 1_555 -3.448 -2.158 2.921 0.070 1.474 68.786 -1.958 3.053 2.877 1.305 -0.062 68.800 32 AA_G77A78:A83C85_AA A 77 ? A 85 ? A 78 ? A 83 ? 1 A A 79 1_555 A A 84 1_555 A U 80 1_555 A A 83 1_555 0.706 -0.790 2.840 2.158 -1.451 29.117 -1.289 -0.986 2.919 -2.878 -4.281 29.230 33 AA_A78U79:A82A83_AA A 78 ? A 83 ? A 79 ? A 82 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM022778 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 5T83 _atom_sites.fract_transf_matrix[1][1] 0.020370 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020370 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004059 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C IR MG N O P SR # loop_