HEADER TRANSFERASE 08-SEP-16 5T8O TITLE CRYSTAL STRUCTURE OF MURINE NF-KAPPAB INDUCING KINASE (NIK) BOUND TO TITLE 2 IMIDAZOBENZOXEPIN COMPOUND 3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NF-KAPPA-BETA-INDUCING KINASE,SERINE/THREONINE-PROTEIN COMPND 5 KINASE NIK; COMPND 6 EC: 2.7.11.25; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: MAP3K14, NIK; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: SF9 KEYWDS PROTEIN SERINE/THREONINE KINASE, NF-KAPPAB, MAP3K14, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.A.SMITH,P.MCEWAN,S.G.HYMOWITZ REVDAT 4 08-MAY-24 5T8O 1 REMARK REVDAT 3 08-FEB-17 5T8O 1 JRNL REVDAT 2 25-JAN-17 5T8O 1 JRNL REVDAT 1 11-JAN-17 5T8O 0 JRNL AUTH G.M.CASTANEDO,N.BLAQUIERE,M.BERESINI,B.BRAVO,H.BRIGHTBILL, JRNL AUTH 2 J.CHEN,H.F.CUI,C.EIGENBROT,C.EVERETT,J.FENG,R.GODEMANN, JRNL AUTH 3 E.GOGOL,S.HYMOWITZ,A.JOHNSON,N.KAYAGAKI,P.B.KOHLI,K.KNUPPEL, JRNL AUTH 4 J.KRAEMER,S.KRUGER,P.LOKE,P.MCEWAN,C.MONTALBETTI, JRNL AUTH 5 D.A.ROBERTS,M.SMITH,S.STEINBACHER,S.SUJATHA-BHASKAR, JRNL AUTH 6 R.TAKAHASHI,X.WANG,L.C.WU,Y.ZHANG,S.T.STABEN JRNL TITL STRUCTURE-BASED DESIGN OF TRICYCLIC NF-KAPPA B INDUCING JRNL TITL 2 KINASE (NIK) INHIBITORS THAT HAVE HIGH SELECTIVITY OVER JRNL TITL 3 PHOSPHOINOSITIDE-3-KINASE (PI3K). JRNL REF J. MED. CHEM. V. 60 627 2017 JRNL REFN ISSN 1520-4804 JRNL PMID 28005357 JRNL DOI 10.1021/ACS.JMEDCHEM.6B01363 REMARK 2 REMARK 2 RESOLUTION. 2.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 143.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 3 NUMBER OF REFLECTIONS : 31025 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.300 REMARK 3 FREE R VALUE TEST SET COUNT : 3549 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.41 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.47 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2259 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.65 REMARK 3 BIN R VALUE (WORKING SET) : 0.2920 REMARK 3 BIN FREE R VALUE SET COUNT : 271 REMARK 3 BIN FREE R VALUE : 0.3350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5067 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 81 REMARK 3 SOLVENT ATOMS : 286 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.08000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : -0.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.396 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.273 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.199 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.556 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.890 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5291 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5059 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7165 ; 1.373 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11684 ; 0.937 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 653 ; 6.284 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 220 ;35.963 ;23.318 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 912 ;15.209 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;17.682 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 768 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5854 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1166 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2609 ; 0.430 ; 1.670 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2610 ; 0.430 ; 1.670 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3256 ; 0.784 ; 2.501 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3256 ; 0.784 ; 2.502 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2682 ; 0.393 ; 1.761 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2683 ; 0.393 ; 1.761 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3907 ; 0.650 ; 2.623 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5948 ; 3.484 ;13.683 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5923 ; 3.410 ;13.606 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 334 A 410 REMARK 3 ORIGIN FOR THE GROUP (A): 28.3640 28.1400 2.8020 REMARK 3 T TENSOR REMARK 3 T11: 0.0075 T22: 0.0188 REMARK 3 T33: 0.0862 T12: -0.0033 REMARK 3 T13: 0.0010 T23: 0.0360 REMARK 3 L TENSOR REMARK 3 L11: 6.2268 L22: 4.0744 REMARK 3 L33: 4.3331 L12: -1.9214 REMARK 3 L13: 1.0599 L23: -0.6144 REMARK 3 S TENSOR REMARK 3 S11: -0.0708 S12: 0.0153 S13: -0.1183 REMARK 3 S21: 0.1149 S22: -0.0952 S23: 0.0411 REMARK 3 S31: -0.0043 S32: 0.0460 S33: 0.1660 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 411 A 543 REMARK 3 ORIGIN FOR THE GROUP (A): 45.2000 21.4910 0.5100 REMARK 3 T TENSOR REMARK 3 T11: 0.0641 T22: 0.0261 REMARK 3 T33: 0.0599 T12: 0.0113 REMARK 3 T13: -0.0105 T23: 0.0236 REMARK 3 L TENSOR REMARK 3 L11: 6.5094 L22: 0.6018 REMARK 3 L33: 0.8829 L12: -0.2684 REMARK 3 L13: -0.7782 L23: -0.1245 REMARK 3 S TENSOR REMARK 3 S11: -0.0409 S12: 0.1696 S13: 0.1690 REMARK 3 S21: -0.0360 S22: -0.0434 S23: 0.0871 REMARK 3 S31: -0.1388 S32: 0.0386 S33: 0.0842 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 544 A 675 REMARK 3 ORIGIN FOR THE GROUP (A): 62.9660 15.9490 7.5900 REMARK 3 T TENSOR REMARK 3 T11: 0.0677 T22: 0.1612 REMARK 3 T33: 0.0806 T12: 0.0054 REMARK 3 T13: -0.0284 T23: 0.0820 REMARK 3 L TENSOR REMARK 3 L11: 5.0717 L22: 3.4259 REMARK 3 L33: 7.5004 L12: 1.1022 REMARK 3 L13: -3.3336 L23: -0.8197 REMARK 3 S TENSOR REMARK 3 S11: -0.0227 S12: -0.6313 S13: -0.4236 REMARK 3 S21: 0.3025 S22: -0.1436 S23: -0.2633 REMARK 3 S31: 0.4494 S32: 0.4365 S33: 0.1662 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 334 B 410 REMARK 3 ORIGIN FOR THE GROUP (A): 0.1290 40.2190 -2.8910 REMARK 3 T TENSOR REMARK 3 T11: 0.0271 T22: 0.0054 REMARK 3 T33: 0.0787 T12: 0.0020 REMARK 3 T13: -0.0385 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 6.8228 L22: 3.6321 REMARK 3 L33: 4.5380 L12: -0.2225 REMARK 3 L13: -0.1983 L23: 0.5224 REMARK 3 S TENSOR REMARK 3 S11: -0.0281 S12: 0.0629 S13: -0.1005 REMARK 3 S21: -0.0217 S22: 0.0969 S23: -0.1273 REMARK 3 S31: -0.0287 S32: -0.0575 S33: -0.0688 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 411 B 554 REMARK 3 ORIGIN FOR THE GROUP (A): 17.0940 47.6610 -3.9330 REMARK 3 T TENSOR REMARK 3 T11: 0.1069 T22: 0.0143 REMARK 3 T33: 0.0254 T12: 0.0199 REMARK 3 T13: -0.0416 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 5.1098 L22: 4.5601 REMARK 3 L33: 0.7697 L12: 2.5091 REMARK 3 L13: -0.1117 L23: -0.4421 REMARK 3 S TENSOR REMARK 3 S11: -0.1259 S12: 0.1510 S13: 0.1301 REMARK 3 S21: -0.1272 S22: 0.0340 S23: 0.1935 REMARK 3 S31: -0.2405 S32: -0.0330 S33: 0.0918 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 555 B 674 REMARK 3 ORIGIN FOR THE GROUP (A): 34.2510 55.4200 0.8650 REMARK 3 T TENSOR REMARK 3 T11: 0.0912 T22: 0.0967 REMARK 3 T33: 0.1207 T12: -0.0315 REMARK 3 T13: -0.0197 T23: -0.0222 REMARK 3 L TENSOR REMARK 3 L11: 4.2773 L22: 5.9641 REMARK 3 L33: 6.5103 L12: -1.0178 REMARK 3 L13: -1.1250 L23: 0.7914 REMARK 3 S TENSOR REMARK 3 S11: 0.0143 S12: -0.1782 S13: 0.1418 REMARK 3 S21: 0.1083 S22: 0.1139 S23: -0.7742 REMARK 3 S31: 0.0104 S32: 0.7300 S33: -0.1282 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5T8O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1000213322. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-MAR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34595 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.410 REMARK 200 RESOLUTION RANGE LOW (A) : 50.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.41 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.39400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.3-0.9M AMMONIUM SULPHATE, 0.05-0.1M REMARK 280 SODIUM CITRATE, 0.7-1.0M LITHIUM SULPHATE, PH 6.2, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 22.73500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.10250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 11.36750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 327 REMARK 465 SER A 328 REMARK 465 ALA A 329 REMARK 465 LEU A 330 REMARK 465 GLU A 331 REMARK 465 LYS A 332 REMARK 465 VAL A 333 REMARK 465 SER A 364 REMARK 465 GLY A 365 REMARK 465 SER A 366 REMARK 465 ALA A 367 REMARK 465 LYS A 368 REMARK 465 LEU A 369 REMARK 465 GLN A 370 REMARK 465 ARG A 371 REMARK 465 LEU A 372 REMARK 465 GLY A 373 REMARK 465 PRO A 374 REMARK 465 GLU A 375 REMARK 465 THR A 376 REMARK 465 GLU A 377 REMARK 465 PRO A 545 REMARK 465 ASP A 546 REMARK 465 GLY A 547 REMARK 465 LEU A 548 REMARK 465 GLY B 327 REMARK 465 SER B 328 REMARK 465 ALA B 329 REMARK 465 LEU B 330 REMARK 465 GLU B 331 REMARK 465 LYS B 332 REMARK 465 VAL B 333 REMARK 465 SER B 364 REMARK 465 GLY B 365 REMARK 465 SER B 366 REMARK 465 ALA B 367 REMARK 465 LYS B 368 REMARK 465 LEU B 369 REMARK 465 GLN B 370 REMARK 465 ARG B 371 REMARK 465 LEU B 372 REMARK 465 GLY B 373 REMARK 465 PRO B 374 REMARK 465 GLU B 375 REMARK 465 THR B 376 REMARK 465 GLU B 377 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 517 54.81 -164.31 REMARK 500 ASP A 536 70.22 59.89 REMARK 500 TRP A 598 -24.95 71.25 REMARK 500 ARG A 603 -51.81 -138.35 REMARK 500 PRO A 605 119.92 -32.68 REMARK 500 PRO A 616 43.86 -81.42 REMARK 500 ASP B 392 61.25 37.98 REMARK 500 ASP B 517 52.17 -168.86 REMARK 500 ASP B 536 69.96 60.16 REMARK 500 PRO B 545 -63.90 -7.19 REMARK 500 ASP B 546 36.98 -92.90 REMARK 500 ASP B 576 -161.79 -129.71 REMARK 500 TRP B 598 -24.88 79.35 REMARK 500 PRO B 616 47.36 -80.13 REMARK 500 LYS B 668 -73.25 -107.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 543 GLN A 544 149.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 942 DISTANCE = 6.65 ANGSTROMS REMARK 525 HOH A 943 DISTANCE = 7.24 ANGSTROMS REMARK 525 HOH B 939 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH B 940 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH B 941 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH B 942 DISTANCE = 7.10 ANGSTROMS REMARK 525 HOH B 943 DISTANCE = 9.35 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 76Z A 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 76Z B 704 DBREF 5T8O A 329 675 UNP Q9WUL6 M3K14_MOUSE 329 675 DBREF 5T8O B 329 675 UNP Q9WUL6 M3K14_MOUSE 329 675 SEQADV 5T8O GLY A 327 UNP Q9WUL6 EXPRESSION TAG SEQADV 5T8O SER A 328 UNP Q9WUL6 EXPRESSION TAG SEQADV 5T8O GLY B 327 UNP Q9WUL6 EXPRESSION TAG SEQADV 5T8O SER B 328 UNP Q9WUL6 EXPRESSION TAG SEQRES 1 A 349 GLY SER ALA LEU GLU LYS VAL PRO VAL GLU GLU TYR LEU SEQRES 2 A 349 VAL HIS ALA LEU GLN GLY SER VAL SER SER GLY GLN ALA SEQRES 3 A 349 HIS SER LEU ALA SER LEU ALA LYS THR TRP SER SER GLY SEQRES 4 A 349 SER ALA LYS LEU GLN ARG LEU GLY PRO GLU THR GLU ASP SEQRES 5 A 349 ASN GLU GLY VAL LEU LEU THR GLU LYS LEU LYS PRO VAL SEQRES 6 A 349 ASP TYR GLU TYR ARG GLU GLU VAL HIS TRP MET THR HIS SEQRES 7 A 349 GLN PRO ARG VAL GLY ARG GLY SER PHE GLY GLU VAL HIS SEQRES 8 A 349 ARG MET LYS ASP LYS GLN THR GLY PHE GLN CYS ALA VAL SEQRES 9 A 349 LYS LYS VAL ARG LEU GLU VAL PHE ARG VAL GLU GLU LEU SEQRES 10 A 349 VAL ALA CYS ALA GLY LEU SER SER PRO ARG ILE VAL PRO SEQRES 11 A 349 LEU TYR GLY ALA VAL ARG GLU GLY PRO TRP VAL ASN ILE SEQRES 12 A 349 PHE MET GLU LEU LEU GLU GLY GLY SER LEU GLY GLN LEU SEQRES 13 A 349 ILE LYS GLN MET GLY CYS LEU PRO GLU ASP ARG ALA LEU SEQRES 14 A 349 TYR TYR LEU GLY GLN ALA LEU GLU GLY LEU GLU TYR LEU SEQRES 15 A 349 HIS THR ARG ARG ILE LEU HIS GLY ASP VAL LYS ALA ASP SEQRES 16 A 349 ASN VAL LEU LEU SER SER ASP GLY SER ARG ALA ALA LEU SEQRES 17 A 349 CYS ASP PHE GLY HIS ALA LEU CYS LEU GLN PRO ASP GLY SEQRES 18 A 349 LEU GLY LYS SER LEU LEU THR GLY ASP TYR ILE PRO GLY SEQRES 19 A 349 THR GLU THR HIS MET ALA PRO GLU VAL VAL MET GLY LYS SEQRES 20 A 349 PRO CYS ASP ALA LYS VAL ASP ILE TRP SER SER CYS CYS SEQRES 21 A 349 MET MET LEU HIS MET LEU ASN GLY CYS HIS PRO TRP THR SEQRES 22 A 349 GLN TYR PHE ARG GLY PRO LEU CYS LEU LYS ILE ALA SER SEQRES 23 A 349 GLU PRO PRO PRO ILE ARG GLU ILE PRO PRO SER CYS ALA SEQRES 24 A 349 PRO LEU THR ALA GLN ALA ILE GLN GLU GLY LEU ARG LYS SEQRES 25 A 349 GLU PRO VAL HIS ARG ALA SER ALA MET GLU LEU ARG ARG SEQRES 26 A 349 LYS VAL GLY LYS ALA LEU GLN GLU VAL GLY GLY LEU LYS SEQRES 27 A 349 SER PRO TRP LYS GLY GLU TYR LYS GLU PRO ARG SEQRES 1 B 349 GLY SER ALA LEU GLU LYS VAL PRO VAL GLU GLU TYR LEU SEQRES 2 B 349 VAL HIS ALA LEU GLN GLY SER VAL SER SER GLY GLN ALA SEQRES 3 B 349 HIS SER LEU ALA SER LEU ALA LYS THR TRP SER SER GLY SEQRES 4 B 349 SER ALA LYS LEU GLN ARG LEU GLY PRO GLU THR GLU ASP SEQRES 5 B 349 ASN GLU GLY VAL LEU LEU THR GLU LYS LEU LYS PRO VAL SEQRES 6 B 349 ASP TYR GLU TYR ARG GLU GLU VAL HIS TRP MET THR HIS SEQRES 7 B 349 GLN PRO ARG VAL GLY ARG GLY SER PHE GLY GLU VAL HIS SEQRES 8 B 349 ARG MET LYS ASP LYS GLN THR GLY PHE GLN CYS ALA VAL SEQRES 9 B 349 LYS LYS VAL ARG LEU GLU VAL PHE ARG VAL GLU GLU LEU SEQRES 10 B 349 VAL ALA CYS ALA GLY LEU SER SER PRO ARG ILE VAL PRO SEQRES 11 B 349 LEU TYR GLY ALA VAL ARG GLU GLY PRO TRP VAL ASN ILE SEQRES 12 B 349 PHE MET GLU LEU LEU GLU GLY GLY SER LEU GLY GLN LEU SEQRES 13 B 349 ILE LYS GLN MET GLY CYS LEU PRO GLU ASP ARG ALA LEU SEQRES 14 B 349 TYR TYR LEU GLY GLN ALA LEU GLU GLY LEU GLU TYR LEU SEQRES 15 B 349 HIS THR ARG ARG ILE LEU HIS GLY ASP VAL LYS ALA ASP SEQRES 16 B 349 ASN VAL LEU LEU SER SER ASP GLY SER ARG ALA ALA LEU SEQRES 17 B 349 CYS ASP PHE GLY HIS ALA LEU CYS LEU GLN PRO ASP GLY SEQRES 18 B 349 LEU GLY LYS SER LEU LEU THR GLY ASP TYR ILE PRO GLY SEQRES 19 B 349 THR GLU THR HIS MET ALA PRO GLU VAL VAL MET GLY LYS SEQRES 20 B 349 PRO CYS ASP ALA LYS VAL ASP ILE TRP SER SER CYS CYS SEQRES 21 B 349 MET MET LEU HIS MET LEU ASN GLY CYS HIS PRO TRP THR SEQRES 22 B 349 GLN TYR PHE ARG GLY PRO LEU CYS LEU LYS ILE ALA SER SEQRES 23 B 349 GLU PRO PRO PRO ILE ARG GLU ILE PRO PRO SER CYS ALA SEQRES 24 B 349 PRO LEU THR ALA GLN ALA ILE GLN GLU GLY LEU ARG LYS SEQRES 25 B 349 GLU PRO VAL HIS ARG ALA SER ALA MET GLU LEU ARG ARG SEQRES 26 B 349 LYS VAL GLY LYS ALA LEU GLN GLU VAL GLY GLY LEU LYS SEQRES 27 B 349 SER PRO TRP LYS GLY GLU TYR LYS GLU PRO ARG HET SO4 A 701 5 HET SO4 A 702 5 HET SO4 A 703 5 HET SO4 A 704 5 HET 76Z A 705 23 HET SO4 B 701 5 HET SO4 B 702 5 HET SO4 B 703 5 HET 76Z B 704 23 HETNAM SO4 SULFATE ION HETNAM 76Z 10-(3-METHYL-3-OXIDANYL-BUT-1-YNYL)-5,6- HETNAM 2 76Z DIHYDROIMIDAZO[1,2-D][1,4]BENZOXAZEPINE-2-CARBOXAMIDE FORMUL 3 SO4 7(O4 S 2-) FORMUL 7 76Z 2(C17 H17 N3 O3) FORMUL 12 HOH *286(H2 O) HELIX 1 AA1 PRO A 334 GLN A 344 1 11 HELIX 2 AA2 GLN A 351 SER A 363 1 13 HELIX 3 AA3 GLU A 436 ARG A 439 5 4 HELIX 4 AA4 VAL A 440 ALA A 445 1 6 HELIX 5 AA5 SER A 478 GLY A 487 1 10 HELIX 6 AA6 PRO A 490 ARG A 511 1 22 HELIX 7 AA7 LYS A 519 ASP A 521 5 3 HELIX 8 AA8 THR A 561 MET A 565 5 5 HELIX 9 AA9 ALA A 566 MET A 571 1 6 HELIX 10 AB1 LYS A 578 GLY A 594 1 17 HELIX 11 AB2 PRO A 605 GLU A 613 1 9 HELIX 12 AB3 PRO A 616 ILE A 620 5 5 HELIX 13 AB4 ALA A 625 LEU A 636 1 12 HELIX 14 AB5 GLU A 639 ARG A 643 5 5 HELIX 15 AB6 SER A 645 VAL A 660 1 16 HELIX 16 AB7 VAL B 335 GLN B 344 1 10 HELIX 17 AB8 GLN B 351 THR B 361 1 11 HELIX 18 AB9 GLU B 436 ARG B 439 5 4 HELIX 19 AC1 VAL B 440 ALA B 445 1 6 HELIX 20 AC2 SER B 478 GLY B 487 1 10 HELIX 21 AC3 PRO B 490 ARG B 511 1 22 HELIX 22 AC4 LYS B 519 ASP B 521 5 3 HELIX 23 AC5 THR B 561 MET B 565 5 5 HELIX 24 AC6 ALA B 566 MET B 571 1 6 HELIX 25 AC7 ALA B 577 GLY B 594 1 18 HELIX 26 AC8 PRO B 605 GLU B 613 1 9 HELIX 27 AC9 PRO B 616 ILE B 620 5 5 HELIX 28 AD1 ALA B 625 LEU B 636 1 12 HELIX 29 AD2 SER B 645 VAL B 660 1 16 SHEET 1 AA1 7 VAL A 347 SER A 349 0 SHEET 2 AA1 7 GLU A 380 LEU A 383 1 O LEU A 383 N SER A 348 SHEET 3 AA1 7 LEU A 457 GLU A 463 -1 O ARG A 462 N GLU A 380 SHEET 4 AA1 7 TRP A 466 MET A 471 -1 O PHE A 470 N GLY A 459 SHEET 5 AA1 7 GLN A 427 ARG A 434 -1 N VAL A 433 O VAL A 467 SHEET 6 AA1 7 VAL A 416 ASP A 421 -1 N HIS A 417 O VAL A 430 SHEET 7 AA1 7 TRP A 401 THR A 403 -1 N MET A 402 O LYS A 420 SHEET 1 AA2 2 ILE A 513 LEU A 514 0 SHEET 2 AA2 2 LEU A 541 CYS A 542 -1 O LEU A 541 N LEU A 514 SHEET 1 AA3 2 VAL A 523 LEU A 525 0 SHEET 2 AA3 2 ALA A 532 LEU A 534 -1 O ALA A 533 N LEU A 524 SHEET 1 AA4 2 LYS A 550 SER A 551 0 SHEET 2 AA4 2 PRO A 574 CYS A 575 -1 O CYS A 575 N LYS A 550 SHEET 1 AA5 7 VAL B 347 SER B 349 0 SHEET 2 AA5 7 ASN B 379 LEU B 383 1 O LEU B 383 N SER B 348 SHEET 3 AA5 7 LEU B 457 GLU B 463 -1 O ARG B 462 N GLU B 380 SHEET 4 AA5 7 TRP B 466 MET B 471 -1 O ASN B 468 N VAL B 461 SHEET 5 AA5 7 GLN B 427 ARG B 434 -1 N ALA B 429 O MET B 471 SHEET 6 AA5 7 VAL B 416 ASP B 421 -1 N HIS B 417 O VAL B 430 SHEET 7 AA5 7 TRP B 401 THR B 403 -1 N MET B 402 O LYS B 420 SHEET 1 AA6 2 ILE B 513 LEU B 514 0 SHEET 2 AA6 2 LEU B 541 CYS B 542 -1 O LEU B 541 N LEU B 514 SHEET 1 AA7 2 VAL B 523 LEU B 525 0 SHEET 2 AA7 2 ALA B 532 LEU B 534 -1 O ALA B 533 N LEU B 524 SHEET 1 AA8 2 LYS B 550 SER B 551 0 SHEET 2 AA8 2 PRO B 574 CYS B 575 -1 O CYS B 575 N LYS B 550 CISPEP 1 GLN A 405 PRO A 406 0 0.28 CISPEP 2 GLN B 405 PRO B 406 0 -2.77 SITE 1 AC1 3 ARG A 637 LYS A 638 GLU A 639 SITE 1 AC2 7 ARG A 410 GLY A 411 SER A 478 GLN A 481 SITE 2 AC2 7 76Z A 705 HOH A 830 HOH B 861 SITE 1 AC3 2 ARG A 650 ARG A 651 SITE 1 AC4 5 LYS A 519 HIS A 596 GLY B 350 GLN B 351 SITE 2 AC4 5 HOH B 816 SITE 1 AC5 14 GLY A 411 VAL A 416 ALA A 429 GLU A 442 SITE 2 AC5 14 VAL A 455 ILE A 469 MET A 471 GLU A 472 SITE 3 AC5 14 LEU A 473 LEU A 474 LEU A 524 ASP A 536 SITE 4 AC5 14 PHE A 537 SO4 A 702 SITE 1 AC6 4 GLY A 350 GLN A 351 LYS B 519 HIS B 596 SITE 1 AC7 5 ARG B 637 LYS B 638 GLU B 639 HIS B 642 SITE 2 AC7 5 HOH B 860 SITE 1 AC8 4 ARG B 410 GLY B 411 GLN B 481 76Z B 704 SITE 1 AC9 14 ARG B 410 GLY B 411 VAL B 416 ALA B 429 SITE 2 AC9 14 GLU B 442 ILE B 469 MET B 471 GLU B 472 SITE 3 AC9 14 LEU B 473 LEU B 474 LEU B 524 ASP B 536 SITE 4 AC9 14 PHE B 537 SO4 B 703 CRYST1 143.950 143.950 45.470 90.00 90.00 90.00 P 43 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006947 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006947 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021993 0.00000