HEADER TRANSFERASE 08-SEP-16 5T8P TITLE CRYSTAL STRUCTURE OF MURINE NF-KAPPAB INDUCING KINASE (NIK) BOUND TO TITLE 2 BENZOXEPIN COMPOUND 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 329-675; COMPND 5 SYNONYM: NF-KAPPA-BETA-INDUCING KINASE,SERINE/THREONINE-PROTEIN COMPND 6 KINASE NIK; COMPND 7 EC: 2.7.11.25; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: MAP3K14, NIK; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: SF9 KEYWDS PROTEIN SERINE/THREONINE KINASE, NF-KAPPAB, MAP3K14, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.A.SMITH,P.A.MCEWAN REVDAT 3 08-FEB-17 5T8P 1 JRNL REVDAT 2 25-JAN-17 5T8P 1 JRNL REVDAT 1 11-JAN-17 5T8P 0 JRNL AUTH G.M.CASTANEDO,N.BLAQUIERE,M.BERESINI,B.BRAVO,H.BRIGHTBILL, JRNL AUTH 2 J.CHEN,H.F.CUI,C.EIGENBROT,C.EVERETT,J.FENG,R.GODEMANN, JRNL AUTH 3 E.GOGOL,S.HYMOWITZ,A.JOHNSON,N.KAYAGAKI,P.B.KOHLI,K.KNUPPEL, JRNL AUTH 4 J.KRAEMER,S.KRUGER,P.LOKE,P.MCEWAN,C.MONTALBETTI, JRNL AUTH 5 D.A.ROBERTS,M.SMITH,S.STEINBACHER,S.SUJATHA-BHASKAR, JRNL AUTH 6 R.TAKAHASHI,X.WANG,L.C.WU,Y.ZHANG,S.T.STABEN JRNL TITL STRUCTURE-BASED DESIGN OF TRICYCLIC NF-KAPPA B INDUCING JRNL TITL 2 KINASE (NIK) INHIBITORS THAT HAVE HIGH SELECTIVITY OVER JRNL TITL 3 PHOSPHOINOSITIDE-3-KINASE (PI3K). JRNL REF J. MED. CHEM. V. 60 627 2017 JRNL REFN ISSN 1520-4804 JRNL PMID 28005357 JRNL DOI 10.1021/ACS.JMEDCHEM.6B01363 REMARK 2 REMARK 2 RESOLUTION. 2.32 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.32 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.43 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 38277 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1920 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.32 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.38 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2836 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE SET COUNT : 161 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5086 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.19000 REMARK 3 B22 (A**2) : -0.19000 REMARK 3 B33 (A**2) : 0.38000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.237 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.203 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.145 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.383 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5269 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5150 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7132 ; 1.519 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11763 ; 0.974 ; 3.004 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 652 ; 6.488 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 219 ;35.588 ;23.379 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 909 ;16.417 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;18.305 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 765 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5913 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1161 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2617 ; 1.336 ; 3.347 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2616 ; 1.336 ; 3.345 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3263 ; 2.233 ; 5.010 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3264 ; 2.233 ; 5.012 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2652 ; 1.706 ; 3.658 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2653 ; 1.705 ; 3.658 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3869 ; 2.785 ; 5.393 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5781 ; 5.025 ;26.926 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5782 ; 5.025 ;26.930 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 334 A 410 REMARK 3 ORIGIN FOR THE GROUP (A): 43.9123 43.0840 2.4654 REMARK 3 T TENSOR REMARK 3 T11: 0.0428 T22: 0.0753 REMARK 3 T33: 0.1582 T12: 0.0536 REMARK 3 T13: -0.0403 T23: -0.0730 REMARK 3 L TENSOR REMARK 3 L11: 6.2961 L22: 4.9512 REMARK 3 L33: 4.9429 L12: 0.7435 REMARK 3 L13: -0.7863 L23: -0.4981 REMARK 3 S TENSOR REMARK 3 S11: -0.0555 S12: -0.1116 S13: -0.0123 REMARK 3 S21: 0.1019 S22: 0.0385 S23: -0.2763 REMARK 3 S31: -0.0855 S32: -0.0444 S33: 0.0169 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 411 A 543 REMARK 3 ORIGIN FOR THE GROUP (A): 27.1008 49.2208 -0.1274 REMARK 3 T TENSOR REMARK 3 T11: 0.0788 T22: 0.0812 REMARK 3 T33: 0.1012 T12: 0.0307 REMARK 3 T13: 0.0041 T23: -0.0332 REMARK 3 L TENSOR REMARK 3 L11: 4.1639 L22: 0.9129 REMARK 3 L33: 0.8413 L12: -0.6086 REMARK 3 L13: 0.3887 L23: 0.4893 REMARK 3 S TENSOR REMARK 3 S11: -0.0071 S12: 0.1091 S13: 0.0991 REMARK 3 S21: 0.0033 S22: 0.0462 S23: -0.2563 REMARK 3 S31: 0.0427 S32: -0.0280 S33: -0.0391 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 544 A 675 REMARK 3 ORIGIN FOR THE GROUP (A): 9.9000 54.7894 6.6368 REMARK 3 T TENSOR REMARK 3 T11: 0.0617 T22: 0.2138 REMARK 3 T33: 0.0112 T12: 0.0520 REMARK 3 T13: -0.0068 T23: -0.0311 REMARK 3 L TENSOR REMARK 3 L11: 3.6770 L22: 3.6846 REMARK 3 L33: 5.5029 L12: 0.8839 REMARK 3 L13: 1.2607 L23: 1.4479 REMARK 3 S TENSOR REMARK 3 S11: -0.0553 S12: -0.3787 S13: 0.1825 REMARK 3 S21: 0.2853 S22: -0.0858 S23: 0.0844 REMARK 3 S31: -0.2665 S32: -0.1951 S33: 0.1411 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 334 B 410 REMARK 3 ORIGIN FOR THE GROUP (A): 71.9115 31.6462 -3.1898 REMARK 3 T TENSOR REMARK 3 T11: 0.0254 T22: 0.0221 REMARK 3 T33: 0.1116 T12: -0.0171 REMARK 3 T13: 0.0446 T23: -0.0407 REMARK 3 L TENSOR REMARK 3 L11: 5.9120 L22: 6.0121 REMARK 3 L33: 4.3653 L12: 0.3376 REMARK 3 L13: 0.0831 L23: -0.3125 REMARK 3 S TENSOR REMARK 3 S11: -0.0630 S12: -0.0383 S13: 0.1003 REMARK 3 S21: 0.0500 S22: 0.0158 S23: -0.1958 REMARK 3 S31: -0.0804 S32: 0.0358 S33: 0.0471 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 411 B 554 REMARK 3 ORIGIN FOR THE GROUP (A): 55.4106 23.7780 -4.7349 REMARK 3 T TENSOR REMARK 3 T11: 0.0966 T22: 0.0415 REMARK 3 T33: 0.0402 T12: 0.0109 REMARK 3 T13: 0.0123 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 3.6368 L22: 2.5181 REMARK 3 L33: 0.7534 L12: 1.5956 REMARK 3 L13: 0.1086 L23: 0.4412 REMARK 3 S TENSOR REMARK 3 S11: -0.0179 S12: 0.0089 S13: 0.1874 REMARK 3 S21: -0.0616 S22: 0.0538 S23: -0.1513 REMARK 3 S31: 0.1059 S32: -0.0515 S33: -0.0359 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 555 B 674 REMARK 3 ORIGIN FOR THE GROUP (A): 38.2288 16.5450 -0.4928 REMARK 3 T TENSOR REMARK 3 T11: 0.0441 T22: 0.1275 REMARK 3 T33: 0.0343 T12: -0.0525 REMARK 3 T13: -0.0183 T23: 0.0315 REMARK 3 L TENSOR REMARK 3 L11: 3.2902 L22: 3.2730 REMARK 3 L33: 5.3754 L12: -0.5312 REMARK 3 L13: 0.1851 L23: -0.1511 REMARK 3 S TENSOR REMARK 3 S11: -0.0806 S12: -0.0262 S13: 0.0787 REMARK 3 S21: 0.0040 S22: 0.1085 S23: 0.2746 REMARK 3 S31: 0.0176 S32: -0.5627 S33: -0.0279 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5T8P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1000213315. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97626 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40214 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.320 REMARK 200 RESOLUTION RANGE LOW (A) : 71.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : 0.08700 REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.32 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.69200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.3-0.9M AMMONIUM SULPHATE, 0.05-0.1M REMARK 280 SODIUM CITRATE, 0.7-1.0M LITHIUM SULPHATE, PH 6.2, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 22.63000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.94500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 11.31500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 327 REMARK 465 SER A 328 REMARK 465 ALA A 329 REMARK 465 LEU A 330 REMARK 465 GLU A 331 REMARK 465 LYS A 332 REMARK 465 SER A 364 REMARK 465 GLY A 365 REMARK 465 SER A 366 REMARK 465 ALA A 367 REMARK 465 LYS A 368 REMARK 465 LEU A 369 REMARK 465 GLN A 370 REMARK 465 ARG A 371 REMARK 465 LEU A 372 REMARK 465 GLY A 373 REMARK 465 PRO A 374 REMARK 465 GLU A 375 REMARK 465 THR A 376 REMARK 465 GLU A 377 REMARK 465 GLY A 549 REMARK 465 LYS A 550 REMARK 465 GLY B 327 REMARK 465 SER B 328 REMARK 465 ALA B 329 REMARK 465 LEU B 330 REMARK 465 GLU B 331 REMARK 465 LYS B 332 REMARK 465 VAL B 333 REMARK 465 SER B 364 REMARK 465 GLY B 365 REMARK 465 SER B 366 REMARK 465 ALA B 367 REMARK 465 LYS B 368 REMARK 465 LEU B 369 REMARK 465 GLN B 370 REMARK 465 ARG B 371 REMARK 465 LEU B 372 REMARK 465 GLY B 373 REMARK 465 PRO B 374 REMARK 465 GLU B 375 REMARK 465 THR B 376 REMARK 465 GLU B 377 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 333 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 493 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ARG B 493 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 337 -55.60 -28.54 REMARK 500 VAL A 399 -57.02 -120.97 REMARK 500 ASP A 517 57.71 -150.49 REMARK 500 ASP A 536 94.01 69.52 REMARK 500 LEU A 552 -77.05 46.26 REMARK 500 GLN A 600 150.83 154.32 REMARK 500 PRO A 616 38.82 -73.92 REMARK 500 LYS A 668 -115.95 58.24 REMARK 500 ASP B 392 57.27 37.69 REMARK 500 TYR B 395 96.81 -160.40 REMARK 500 GLU B 398 -6.82 75.48 REMARK 500 ASP B 517 58.67 -154.71 REMARK 500 ASP B 536 87.14 72.71 REMARK 500 LEU B 553 49.80 81.13 REMARK 500 PRO B 616 41.21 -79.87 REMARK 500 LYS B 668 -115.35 -127.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 774 A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 774 B 703 DBREF 5T8P A 329 675 UNP Q9WUL6 M3K14_MOUSE 329 675 DBREF 5T8P B 329 675 UNP Q9WUL6 M3K14_MOUSE 329 675 SEQADV 5T8P GLY A 327 UNP Q9WUL6 EXPRESSION TAG SEQADV 5T8P SER A 328 UNP Q9WUL6 EXPRESSION TAG SEQADV 5T8P GLY B 327 UNP Q9WUL6 EXPRESSION TAG SEQADV 5T8P SER B 328 UNP Q9WUL6 EXPRESSION TAG SEQRES 1 A 349 GLY SER ALA LEU GLU LYS VAL PRO VAL GLU GLU TYR LEU SEQRES 2 A 349 VAL HIS ALA LEU GLN GLY SER VAL SER SER GLY GLN ALA SEQRES 3 A 349 HIS SER LEU ALA SER LEU ALA LYS THR TRP SER SER GLY SEQRES 4 A 349 SER ALA LYS LEU GLN ARG LEU GLY PRO GLU THR GLU ASP SEQRES 5 A 349 ASN GLU GLY VAL LEU LEU THR GLU LYS LEU LYS PRO VAL SEQRES 6 A 349 ASP TYR GLU TYR ARG GLU GLU VAL HIS TRP MET THR HIS SEQRES 7 A 349 GLN PRO ARG VAL GLY ARG GLY SER PHE GLY GLU VAL HIS SEQRES 8 A 349 ARG MET LYS ASP LYS GLN THR GLY PHE GLN CYS ALA VAL SEQRES 9 A 349 LYS LYS VAL ARG LEU GLU VAL PHE ARG VAL GLU GLU LEU SEQRES 10 A 349 VAL ALA CYS ALA GLY LEU SER SER PRO ARG ILE VAL PRO SEQRES 11 A 349 LEU TYR GLY ALA VAL ARG GLU GLY PRO TRP VAL ASN ILE SEQRES 12 A 349 PHE MET GLU LEU LEU GLU GLY GLY SER LEU GLY GLN LEU SEQRES 13 A 349 ILE LYS GLN MET GLY CYS LEU PRO GLU ASP ARG ALA LEU SEQRES 14 A 349 TYR TYR LEU GLY GLN ALA LEU GLU GLY LEU GLU TYR LEU SEQRES 15 A 349 HIS THR ARG ARG ILE LEU HIS GLY ASP VAL LYS ALA ASP SEQRES 16 A 349 ASN VAL LEU LEU SER SER ASP GLY SER ARG ALA ALA LEU SEQRES 17 A 349 CYS ASP PHE GLY HIS ALA LEU CYS LEU GLN PRO ASP GLY SEQRES 18 A 349 LEU GLY LYS SER LEU LEU THR GLY ASP TYR ILE PRO GLY SEQRES 19 A 349 THR GLU THR HIS MET ALA PRO GLU VAL VAL MET GLY LYS SEQRES 20 A 349 PRO CYS ASP ALA LYS VAL ASP ILE TRP SER SER CYS CYS SEQRES 21 A 349 MET MET LEU HIS MET LEU ASN GLY CYS HIS PRO TRP THR SEQRES 22 A 349 GLN TYR PHE ARG GLY PRO LEU CYS LEU LYS ILE ALA SER SEQRES 23 A 349 GLU PRO PRO PRO ILE ARG GLU ILE PRO PRO SER CYS ALA SEQRES 24 A 349 PRO LEU THR ALA GLN ALA ILE GLN GLU GLY LEU ARG LYS SEQRES 25 A 349 GLU PRO VAL HIS ARG ALA SER ALA MET GLU LEU ARG ARG SEQRES 26 A 349 LYS VAL GLY LYS ALA LEU GLN GLU VAL GLY GLY LEU LYS SEQRES 27 A 349 SER PRO TRP LYS GLY GLU TYR LYS GLU PRO ARG SEQRES 1 B 349 GLY SER ALA LEU GLU LYS VAL PRO VAL GLU GLU TYR LEU SEQRES 2 B 349 VAL HIS ALA LEU GLN GLY SER VAL SER SER GLY GLN ALA SEQRES 3 B 349 HIS SER LEU ALA SER LEU ALA LYS THR TRP SER SER GLY SEQRES 4 B 349 SER ALA LYS LEU GLN ARG LEU GLY PRO GLU THR GLU ASP SEQRES 5 B 349 ASN GLU GLY VAL LEU LEU THR GLU LYS LEU LYS PRO VAL SEQRES 6 B 349 ASP TYR GLU TYR ARG GLU GLU VAL HIS TRP MET THR HIS SEQRES 7 B 349 GLN PRO ARG VAL GLY ARG GLY SER PHE GLY GLU VAL HIS SEQRES 8 B 349 ARG MET LYS ASP LYS GLN THR GLY PHE GLN CYS ALA VAL SEQRES 9 B 349 LYS LYS VAL ARG LEU GLU VAL PHE ARG VAL GLU GLU LEU SEQRES 10 B 349 VAL ALA CYS ALA GLY LEU SER SER PRO ARG ILE VAL PRO SEQRES 11 B 349 LEU TYR GLY ALA VAL ARG GLU GLY PRO TRP VAL ASN ILE SEQRES 12 B 349 PHE MET GLU LEU LEU GLU GLY GLY SER LEU GLY GLN LEU SEQRES 13 B 349 ILE LYS GLN MET GLY CYS LEU PRO GLU ASP ARG ALA LEU SEQRES 14 B 349 TYR TYR LEU GLY GLN ALA LEU GLU GLY LEU GLU TYR LEU SEQRES 15 B 349 HIS THR ARG ARG ILE LEU HIS GLY ASP VAL LYS ALA ASP SEQRES 16 B 349 ASN VAL LEU LEU SER SER ASP GLY SER ARG ALA ALA LEU SEQRES 17 B 349 CYS ASP PHE GLY HIS ALA LEU CYS LEU GLN PRO ASP GLY SEQRES 18 B 349 LEU GLY LYS SER LEU LEU THR GLY ASP TYR ILE PRO GLY SEQRES 19 B 349 THR GLU THR HIS MET ALA PRO GLU VAL VAL MET GLY LYS SEQRES 20 B 349 PRO CYS ASP ALA LYS VAL ASP ILE TRP SER SER CYS CYS SEQRES 21 B 349 MET MET LEU HIS MET LEU ASN GLY CYS HIS PRO TRP THR SEQRES 22 B 349 GLN TYR PHE ARG GLY PRO LEU CYS LEU LYS ILE ALA SER SEQRES 23 B 349 GLU PRO PRO PRO ILE ARG GLU ILE PRO PRO SER CYS ALA SEQRES 24 B 349 PRO LEU THR ALA GLN ALA ILE GLN GLU GLY LEU ARG LYS SEQRES 25 B 349 GLU PRO VAL HIS ARG ALA SER ALA MET GLU LEU ARG ARG SEQRES 26 B 349 LYS VAL GLY LYS ALA LEU GLN GLU VAL GLY GLY LEU LYS SEQRES 27 B 349 SER PRO TRP LYS GLY GLU TYR LYS GLU PRO ARG HET 774 A 701 17 HET SO4 A 702 5 HET SO4 A 703 5 HET SO4 B 701 5 HET SO4 B 702 5 HET 774 B 703 17 HETNAM 774 6,7-DIHYDROTHIENO[4,5]OXEPINO[1,2-~{C}]PYRIDINE-2- HETNAM 2 774 CARBOXAMIDE HETNAM SO4 SULFATE ION FORMUL 3 774 2(C12 H10 N2 O2 S) FORMUL 4 SO4 4(O4 S 2-) FORMUL 9 HOH *130(H2 O) HELIX 1 AA1 VAL A 335 GLN A 344 1 10 HELIX 2 AA2 GLN A 351 LYS A 360 1 10 HELIX 3 AA3 THR A 361 SER A 363 5 3 HELIX 4 AA4 GLU A 436 ARG A 439 5 4 HELIX 5 AA5 VAL A 440 ALA A 445 1 6 HELIX 6 AA6 LEU A 479 GLY A 487 1 9 HELIX 7 AA7 PRO A 490 ARG A 511 1 22 HELIX 8 AA8 LYS A 519 ASP A 521 5 3 HELIX 9 AA9 THR A 561 MET A 565 5 5 HELIX 10 AB1 ALA A 566 MET A 571 1 6 HELIX 11 AB2 ALA A 577 GLY A 594 1 18 HELIX 12 AB3 PRO A 605 GLU A 613 1 9 HELIX 13 AB4 PRO A 616 ILE A 620 5 5 HELIX 14 AB5 ALA A 625 LEU A 636 1 12 HELIX 15 AB6 GLU A 639 ARG A 643 5 5 HELIX 16 AB7 SER A 645 VAL A 660 1 16 HELIX 17 AB8 VAL B 335 GLN B 344 1 10 HELIX 18 AB9 GLN B 351 LYS B 360 1 10 HELIX 19 AC1 THR B 361 SER B 363 5 3 HELIX 20 AC2 GLU B 436 ARG B 439 5 4 HELIX 21 AC3 VAL B 440 ALA B 445 1 6 HELIX 22 AC4 SER B 478 GLY B 487 1 10 HELIX 23 AC5 PRO B 490 ARG B 511 1 22 HELIX 24 AC6 LYS B 519 ASP B 521 5 3 HELIX 25 AC7 THR B 561 MET B 565 5 5 HELIX 26 AC8 ALA B 566 MET B 571 1 6 HELIX 27 AC9 ALA B 577 GLY B 594 1 18 HELIX 28 AD1 PRO B 605 GLU B 613 1 9 HELIX 29 AD2 PRO B 616 ILE B 620 5 5 HELIX 30 AD3 ALA B 625 LEU B 636 1 12 HELIX 31 AD4 SER B 645 VAL B 660 1 16 SHEET 1 AA1 7 VAL A 347 SER A 349 0 SHEET 2 AA1 7 ASN A 379 LEU A 383 1 O LEU A 383 N SER A 348 SHEET 3 AA1 7 LEU A 457 GLU A 463 -1 O ARG A 462 N GLU A 380 SHEET 4 AA1 7 TRP A 466 MET A 471 -1 O ASN A 468 N VAL A 461 SHEET 5 AA1 7 GLN A 427 ARG A 434 -1 N VAL A 433 O VAL A 467 SHEET 6 AA1 7 VAL A 416 ASP A 421 -1 N MET A 419 O CYS A 428 SHEET 7 AA1 7 TRP A 401 THR A 403 -1 N MET A 402 O LYS A 420 SHEET 1 AA2 3 GLY A 477 SER A 478 0 SHEET 2 AA2 3 VAL A 523 LEU A 525 -1 O LEU A 525 N GLY A 477 SHEET 3 AA2 3 ALA A 532 LEU A 534 -1 O ALA A 533 N LEU A 524 SHEET 1 AA3 2 ILE A 513 LEU A 514 0 SHEET 2 AA3 2 LEU A 541 CYS A 542 -1 O LEU A 541 N LEU A 514 SHEET 1 AA4 7 VAL B 347 SER B 349 0 SHEET 2 AA4 7 ASN B 379 LEU B 383 1 O LEU B 383 N SER B 348 SHEET 3 AA4 7 LEU B 457 GLU B 463 -1 O ARG B 462 N GLU B 380 SHEET 4 AA4 7 TRP B 466 MET B 471 -1 O ASN B 468 N VAL B 461 SHEET 5 AA4 7 GLN B 427 ARG B 434 -1 N LYS B 431 O ILE B 469 SHEET 6 AA4 7 VAL B 416 ASP B 421 -1 N MET B 419 O CYS B 428 SHEET 7 AA4 7 TRP B 401 THR B 403 -1 N MET B 402 O LYS B 420 SHEET 1 AA5 2 ILE B 513 LEU B 514 0 SHEET 2 AA5 2 LEU B 541 CYS B 542 -1 O LEU B 541 N LEU B 514 SHEET 1 AA6 2 VAL B 523 LEU B 525 0 SHEET 2 AA6 2 ALA B 532 LEU B 534 -1 O ALA B 533 N LEU B 524 SHEET 1 AA7 2 LYS B 550 SER B 551 0 SHEET 2 AA7 2 PRO B 574 CYS B 575 -1 O CYS B 575 N LYS B 550 SITE 1 AC1 9 VAL A 416 ALA A 429 MET A 471 GLU A 472 SITE 2 AC1 9 LEU A 473 LEU A 474 ASP A 521 LEU A 524 SITE 3 AC1 9 ASP A 536 SITE 1 AC2 6 PRO A 406 VAL A 408 GLY A 409 ARG A 410 SITE 2 AC2 6 HIS A 417 ARG A 418 SITE 1 AC3 3 ARG A 637 LYS A 638 GLU A 639 SITE 1 AC4 4 ARG B 637 LYS B 638 GLU B 639 HIS B 642 SITE 1 AC5 8 HIS B 404 PRO B 406 VAL B 408 GLY B 409 SITE 2 AC5 8 VAL B 416 HIS B 417 ARG B 418 HOH B 846 SITE 1 AC6 9 VAL B 416 ALA B 429 MET B 471 GLU B 472 SITE 2 AC6 9 LEU B 473 LEU B 474 ASP B 521 LEU B 524 SITE 3 AC6 9 ASP B 536 CRYST1 142.850 142.850 45.260 90.00 90.00 90.00 P 43 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007000 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007000 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022095 0.00000