data_5TBA # _entry.id 5TBA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5TBA pdb_00005tba 10.2210/pdb5tba/pdb WWPDB D_1000223990 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 5TBC unspecified PDB . 5TB8 unspecified PDB . 5TBB unspecified PDB . 5TB9 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5TBA _pdbx_database_status.recvd_initial_deposition_date 2016-09-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Vyas, R.' 1 ? 'Suo, Z.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Am. Chem. Soc.' _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 139 _citation.language ? _citation.page_first 465 _citation.page_last 471 _citation.title 'Structural Insights into the Post-Chemistry Steps of Nucleotide Incorporation Catalyzed by a DNA Polymerase.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.6b11258 _citation.pdbx_database_id_PubMed 27959534 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Reed, A.J.' 1 ? primary 'Vyas, R.' 2 ? primary 'Raper, A.T.' 3 ? primary 'Suo, Z.' 4 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 107.03 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5TBA _cell.details ? _cell.formula_units_Z ? _cell.length_a 54.697 _cell.length_a_esd ? _cell.length_b 79.325 _cell.length_b_esd ? _cell.length_c 54.947 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TBA _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase beta' 39258.785 1 2.7.7.7,4.2.99.- ? ? ? 2 polymer syn '5-MER PHOSPHORYLATED DOWNSTREAM PRIMER' 1536.035 1 ? ? ? 'synthetic DNA' 3 polymer syn '10-MER PRIMER' 3061.004 1 ? ? ? 'Synthetic DNA' 4 polymer syn '16-MER TEMPLATE' 4869.157 1 ? ? ? 'synthetic DNA' 5 non-polymer syn PYROPHOSPHATE 177.975 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 5 ? ? ? ? 7 non-polymer syn '[(2R,5S)-5-(4-amino-2-oxopyrimidin-1(2H)-yl)-1,3-oxathiolan-2-yl]methyl dihydrogen phosphate' 309.236 1 ? ? ? ? 8 water nat water 18.015 59 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGMSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLA TGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQM QDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGV CQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKD IFDYIQWKYREPKDRSEHHHHHH ; ;MGMSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLA TGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQM QDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGV CQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKD IFDYIQWKYREPKDRSEHHHHHH ; A ? 2 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? 3 polydeoxyribonucleotide no no '(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DC)' GCTGATGCGC P ? 4 polydeoxyribonucleotide no no '(DC)(DC)(DG)(DA)(DC)(DG)(DG)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)' CCGACGGCGCATCAGC T ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 MET n 1 4 SER n 1 5 LYS n 1 6 ARG n 1 7 LYS n 1 8 ALA n 1 9 PRO n 1 10 GLN n 1 11 GLU n 1 12 THR n 1 13 LEU n 1 14 ASN n 1 15 GLY n 1 16 GLY n 1 17 ILE n 1 18 THR n 1 19 ASP n 1 20 MET n 1 21 LEU n 1 22 THR n 1 23 GLU n 1 24 LEU n 1 25 ALA n 1 26 ASN n 1 27 PHE n 1 28 GLU n 1 29 LYS n 1 30 ASN n 1 31 VAL n 1 32 SER n 1 33 GLN n 1 34 ALA n 1 35 ILE n 1 36 HIS n 1 37 LYS n 1 38 TYR n 1 39 ASN n 1 40 ALA n 1 41 TYR n 1 42 ARG n 1 43 LYS n 1 44 ALA n 1 45 ALA n 1 46 SER n 1 47 VAL n 1 48 ILE n 1 49 ALA n 1 50 LYS n 1 51 TYR n 1 52 PRO n 1 53 HIS n 1 54 LYS n 1 55 ILE n 1 56 LYS n 1 57 SER n 1 58 GLY n 1 59 ALA n 1 60 GLU n 1 61 ALA n 1 62 LYS n 1 63 LYS n 1 64 LEU n 1 65 PRO n 1 66 GLY n 1 67 VAL n 1 68 GLY n 1 69 THR n 1 70 LYS n 1 71 ILE n 1 72 ALA n 1 73 GLU n 1 74 LYS n 1 75 ILE n 1 76 ASP n 1 77 GLU n 1 78 PHE n 1 79 LEU n 1 80 ALA n 1 81 THR n 1 82 GLY n 1 83 LYS n 1 84 LEU n 1 85 ARG n 1 86 LYS n 1 87 LEU n 1 88 GLU n 1 89 LYS n 1 90 ILE n 1 91 ARG n 1 92 GLN n 1 93 ASP n 1 94 ASP n 1 95 THR n 1 96 SER n 1 97 SER n 1 98 SER n 1 99 ILE n 1 100 ASN n 1 101 PHE n 1 102 LEU n 1 103 THR n 1 104 ARG n 1 105 VAL n 1 106 SER n 1 107 GLY n 1 108 ILE n 1 109 GLY n 1 110 PRO n 1 111 SER n 1 112 ALA n 1 113 ALA n 1 114 ARG n 1 115 LYS n 1 116 PHE n 1 117 VAL n 1 118 ASP n 1 119 GLU n 1 120 GLY n 1 121 ILE n 1 122 LYS n 1 123 THR n 1 124 LEU n 1 125 GLU n 1 126 ASP n 1 127 LEU n 1 128 ARG n 1 129 LYS n 1 130 ASN n 1 131 GLU n 1 132 ASP n 1 133 LYS n 1 134 LEU n 1 135 ASN n 1 136 HIS n 1 137 HIS n 1 138 GLN n 1 139 ARG n 1 140 ILE n 1 141 GLY n 1 142 LEU n 1 143 LYS n 1 144 TYR n 1 145 PHE n 1 146 GLY n 1 147 ASP n 1 148 PHE n 1 149 GLU n 1 150 LYS n 1 151 ARG n 1 152 ILE n 1 153 PRO n 1 154 ARG n 1 155 GLU n 1 156 GLU n 1 157 MET n 1 158 LEU n 1 159 GLN n 1 160 MET n 1 161 GLN n 1 162 ASP n 1 163 ILE n 1 164 VAL n 1 165 LEU n 1 166 ASN n 1 167 GLU n 1 168 VAL n 1 169 LYS n 1 170 LYS n 1 171 VAL n 1 172 ASP n 1 173 SER n 1 174 GLU n 1 175 TYR n 1 176 ILE n 1 177 ALA n 1 178 THR n 1 179 VAL n 1 180 CYS n 1 181 GLY n 1 182 SER n 1 183 PHE n 1 184 ARG n 1 185 ARG n 1 186 GLY n 1 187 ALA n 1 188 GLU n 1 189 SER n 1 190 SER n 1 191 GLY n 1 192 ASP n 1 193 MET n 1 194 ASP n 1 195 VAL n 1 196 LEU n 1 197 LEU n 1 198 THR n 1 199 HIS n 1 200 PRO n 1 201 SER n 1 202 PHE n 1 203 THR n 1 204 SER n 1 205 GLU n 1 206 SER n 1 207 THR n 1 208 LYS n 1 209 GLN n 1 210 PRO n 1 211 LYS n 1 212 LEU n 1 213 LEU n 1 214 HIS n 1 215 GLN n 1 216 VAL n 1 217 VAL n 1 218 GLU n 1 219 GLN n 1 220 LEU n 1 221 GLN n 1 222 LYS n 1 223 VAL n 1 224 HIS n 1 225 PHE n 1 226 ILE n 1 227 THR n 1 228 ASP n 1 229 THR n 1 230 LEU n 1 231 SER n 1 232 LYS n 1 233 GLY n 1 234 GLU n 1 235 THR n 1 236 LYS n 1 237 PHE n 1 238 MET n 1 239 GLY n 1 240 VAL n 1 241 CYS n 1 242 GLN n 1 243 LEU n 1 244 PRO n 1 245 SER n 1 246 LYS n 1 247 ASN n 1 248 ASP n 1 249 GLU n 1 250 LYS n 1 251 GLU n 1 252 TYR n 1 253 PRO n 1 254 HIS n 1 255 ARG n 1 256 ARG n 1 257 ILE n 1 258 ASP n 1 259 ILE n 1 260 ARG n 1 261 LEU n 1 262 ILE n 1 263 PRO n 1 264 LYS n 1 265 ASP n 1 266 GLN n 1 267 TYR n 1 268 TYR n 1 269 CYS n 1 270 GLY n 1 271 VAL n 1 272 LEU n 1 273 TYR n 1 274 PHE n 1 275 THR n 1 276 GLY n 1 277 SER n 1 278 ASP n 1 279 ILE n 1 280 PHE n 1 281 ASN n 1 282 LYS n 1 283 ASN n 1 284 MET n 1 285 ARG n 1 286 ALA n 1 287 HIS n 1 288 ALA n 1 289 LEU n 1 290 GLU n 1 291 LYS n 1 292 GLY n 1 293 PHE n 1 294 THR n 1 295 ILE n 1 296 ASN n 1 297 GLU n 1 298 TYR n 1 299 THR n 1 300 ILE n 1 301 ARG n 1 302 PRO n 1 303 LEU n 1 304 GLY n 1 305 VAL n 1 306 THR n 1 307 GLY n 1 308 VAL n 1 309 ALA n 1 310 GLY n 1 311 GLU n 1 312 PRO n 1 313 LEU n 1 314 PRO n 1 315 VAL n 1 316 ASP n 1 317 SER n 1 318 GLU n 1 319 LYS n 1 320 ASP n 1 321 ILE n 1 322 PHE n 1 323 ASP n 1 324 TYR n 1 325 ILE n 1 326 GLN n 1 327 TRP n 1 328 LYS n 1 329 TYR n 1 330 ARG n 1 331 GLU n 1 332 PRO n 1 333 LYS n 1 334 ASP n 1 335 ARG n 1 336 SER n 1 337 GLU n 1 338 HIS n 1 339 HIS n 1 340 HIS n 1 341 HIS n 1 342 HIS n 1 343 HIS n 2 1 DG n 2 2 DT n 2 3 DC n 2 4 DG n 2 5 DG n 3 1 DG n 3 2 DC n 3 3 DT n 3 4 DG n 3 5 DA n 3 6 DT n 3 7 DG n 3 8 DC n 3 9 DG n 3 10 DC n 4 1 DC n 4 2 DC n 4 3 DG n 4 4 DA n 4 5 DC n 4 6 DG n 4 7 DG n 4 8 DC n 4 9 DG n 4 10 DC n 4 11 DA n 4 12 DT n 4 13 DC n 4 14 DA n 4 15 DG n 4 16 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 343 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene POLB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET28B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? 'Synthetic construct' ? 32630 ? 3 1 sample ? ? 'Synthetic construct' ? 32630 ? 4 1 sample ? ? 'Synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP DPOLB_HUMAN P06746 ? 1 ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; 1 2 PDB 5TBA 5TBA ? 2 ? 1 3 PDB 5TBA 5TBA ? 3 ? 1 4 PDB 5TBA 5TBA ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5TBA A 3 ? 337 ? P06746 1 ? 335 ? 1 335 2 2 5TBA D 1 ? 5 ? 5TBA 1 ? 5 ? 1 5 3 3 5TBA P 1 ? 10 ? 5TBA 1 ? 10 ? 1 10 4 4 5TBA T 1 ? 16 ? 5TBA 1 ? 16 ? 1 16 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5TBA MET A 1 ? UNP P06746 ? ? 'initiating methionine' -1 1 1 5TBA GLY A 2 ? UNP P06746 ? ? 'expression tag' 0 2 1 5TBA HIS A 338 ? UNP P06746 ? ? 'expression tag' 336 3 1 5TBA HIS A 339 ? UNP P06746 ? ? 'expression tag' 337 4 1 5TBA HIS A 340 ? UNP P06746 ? ? 'expression tag' 338 5 1 5TBA HIS A 341 ? UNP P06746 ? ? 'expression tag' 339 6 1 5TBA HIS A 342 ? UNP P06746 ? ? 'expression tag' 340 7 1 5TBA HIS A 343 ? UNP P06746 ? ? 'expression tag' 341 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 42E non-polymer . '[(2R,5S)-5-(4-amino-2-oxopyrimidin-1(2H)-yl)-1,3-oxathiolan-2-yl]methyl dihydrogen phosphate' 3TC-MP 'C8 H12 N3 O6 P S' 309.236 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PPV non-polymer . PYROPHOSPHATE ? 'H4 O7 P2' 177.975 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5TBA _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.34 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47.42 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;50 MM IMIDAZOLE, 350 MM SODIUM ACETATE, 17% PEG3350 , PH 8.0 ; _exptl_crystal_grow.pdbx_pH_range 8.0 # _diffrn.ambient_environment ? _diffrn.ambient_temp 193 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX225HE' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-10-11 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97931 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 31-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97931 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 31-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5TBA _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.490 _reflns.d_resolution_low 25.18 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 15629 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.600 _reflns.pdbx_Rmerge_I_obs 0.16800 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.59 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.70800 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 5.8 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.14000 _refine.aniso_B[1][2] -0.00000 _refine.aniso_B[1][3] -0.12000 _refine.aniso_B[2][2] 0.06000 _refine.aniso_B[2][3] 0.00000 _refine.aniso_B[3][3] 0.13000 _refine.B_iso_max ? _refine.B_iso_mean 41.50 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.932 _refine.correlation_coeff_Fo_to_Fc_free 0.876 _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS ; _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5TBA _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.49 _refine.ls_d_res_low 25.18 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 14831 _refine.ls_number_reflns_R_free 781 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.1 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.208 _refine.ls_R_factor_R_free 0.273 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.205 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4RQ7 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.702 _refine.pdbx_overall_ESU_R_Free 0.325 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 10.760 _refine.overall_SU_ML 0.242 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2537 _refine_hist.pdbx_number_atoms_nucleic_acid 632 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 59 _refine_hist.number_atoms_total 3260 _refine_hist.d_res_high 2.49 _refine_hist.d_res_low 25.18 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 0.018 3317 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 2874 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.464 1.788 4593 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.897 3.000 6659 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.516 5.000 313 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.345 24.344 122 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 16.114 15.000 493 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 19.166 15.000 17 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.074 0.200 474 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.020 3255 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 744 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 2.781 4.206 1264 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 2.782 4.202 1263 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 4.632 6.270 1573 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 4.631 6.275 1574 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.735 4.115 2053 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 2.735 4.116 2052 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 4.247 6.075 3020 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 6.750 32.487 4045 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 6.752 32.501 4037 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.49 _refine_ls_shell.d_res_low 2.56 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 53 _refine_ls_shell.number_reflns_R_work 1009 _refine_ls_shell.percent_reflns_obs 93.24 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3520 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2590 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5TBA _struct.title 'Postcatalytic ternary complex of Human DNA Polymerase Beta with Gapped DNA substrate, incorporated (-)3TC and PPi.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5TBA _struct_keywords.text 'X-FAMILY, POL BETA, DNA POLYMERASE BETA, TRANSFERASE-DNA COMPLEX' _struct_keywords.pdbx_keywords TRANSFERASE/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? I N N 6 ? J N N 6 ? K N N 7 ? L N N 8 ? M N N 8 ? N N N 8 ? O N N 8 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 14 ? VAL A 31 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 AA2 ALA A 34 ? LYS A 50 ? ALA A 32 LYS A 48 1 ? 17 HELX_P HELX_P3 AA3 SER A 57 ? LYS A 63 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 AA4 GLY A 68 ? GLY A 82 ? GLY A 66 GLY A 80 1 ? 15 HELX_P HELX_P5 AA5 LEU A 84 ? ASP A 93 ? LEU A 82 ASP A 91 1 ? 10 HELX_P HELX_P6 AA6 ASP A 93 ? THR A 103 ? ASP A 91 THR A 101 1 ? 11 HELX_P HELX_P7 AA7 GLY A 109 ? GLU A 119 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 AA8 THR A 123 ? ASN A 130 ? THR A 121 ASN A 128 1 ? 8 HELX_P HELX_P9 AA9 GLU A 131 ? LEU A 134 ? GLU A 129 LEU A 132 5 ? 4 HELX_P HELX_P10 AB1 ASN A 135 ? TYR A 144 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 AB2 TYR A 144 ? GLU A 149 ? TYR A 142 GLU A 147 1 ? 6 HELX_P HELX_P12 AB3 ARG A 154 ? ASP A 172 ? ARG A 152 ASP A 170 1 ? 19 HELX_P HELX_P13 AB4 GLY A 181 ? GLY A 186 ? GLY A 179 GLY A 184 5 ? 6 HELX_P HELX_P14 AB5 LYS A 211 ? VAL A 223 ? LYS A 209 VAL A 221 1 ? 13 HELX_P HELX_P15 AB6 PRO A 263 ? ASP A 265 ? PRO A 261 ASP A 263 5 ? 3 HELX_P HELX_P16 AB7 GLN A 266 ? GLY A 276 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P17 AB8 SER A 277 ? HIS A 287 ? SER A 275 HIS A 285 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? K 42E . PA ? ? ? 1_555 C DC 10 "O3'" ? ? A 42E 407 P DC 10 1_555 ? ? ? ? ? ? ? 1.516 ? ? metalc1 metalc ? ? A SER 32 O ? ? ? 1_555 I NA . NA ? ? A SER 30 A NA 405 1_555 ? ? ? ? ? ? ? 2.409 ? ? metalc2 metalc ? ? A LYS 62 O ? ? ? 1_555 H NA . NA ? ? A LYS 60 A NA 404 1_555 ? ? ? ? ? ? ? 2.452 ? ? metalc3 metalc ? ? A LEU 64 O ? ? ? 1_555 H NA . NA ? ? A LEU 62 A NA 404 1_555 ? ? ? ? ? ? ? 2.587 ? ? metalc4 metalc ? ? A VAL 67 O ? ? ? 1_555 H NA . NA ? ? A VAL 65 A NA 404 1_555 ? ? ? ? ? ? ? 2.522 ? ? metalc5 metalc ? ? A THR 103 O ? ? ? 1_555 G NA . NA ? ? A THR 101 A NA 403 1_555 ? ? ? ? ? ? ? 2.150 ? ? metalc6 metalc ? ? A VAL 105 O ? ? ? 1_555 G NA . NA ? ? A VAL 103 A NA 403 1_555 ? ? ? ? ? ? ? 2.516 ? ? metalc7 metalc ? ? A ILE 108 O ? ? ? 1_555 G NA . NA ? ? A ILE 106 A NA 403 1_555 ? ? ? ? ? ? ? 2.242 ? ? metalc8 metalc ? ? A SER 173 OG ? ? ? 1_555 I NA . NA ? ? A SER 171 A NA 405 1_455 ? ? ? ? ? ? ? 2.156 ? ? metalc9 metalc ? ? A ASP 192 OD1 ? ? ? 1_555 F NA . NA ? ? A ASP 190 A NA 402 1_555 ? ? ? ? ? ? ? 2.412 ? ? metalc10 metalc ? ? A ASP 194 OD2 ? ? ? 1_555 F NA . NA ? ? A ASP 192 A NA 402 1_555 ? ? ? ? ? ? ? 2.791 ? ? metalc11 metalc ? ? E PPV . O11 ? ? ? 1_555 F NA . NA ? ? A PPV 401 A NA 402 1_555 ? ? ? ? ? ? ? 3.096 ? ? metalc12 metalc ? ? E PPV . O21 ? ? ? 1_555 F NA . NA ? ? A PPV 401 A NA 402 1_555 ? ? ? ? ? ? ? 2.402 ? ? metalc13 metalc ? ? E PPV . O21 ? ? ? 1_555 J NA . NA ? ? A PPV 401 A NA 406 1_555 ? ? ? ? ? ? ? 2.260 ? ? metalc14 metalc ? ? F NA . NA ? ? ? 1_555 K 42E . O2A ? ? A NA 402 A 42E 407 1_555 ? ? ? ? ? ? ? 2.279 ? ? metalc15 metalc ? ? G NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 403 A HOH 538 1_555 ? ? ? ? ? ? ? 2.492 ? ? metalc16 metalc ? ? G NA . NA ? ? ? 1_555 C DG 9 OP1 ? ? A NA 403 P DG 9 1_555 ? ? ? ? ? ? ? 2.264 ? ? metalc17 metalc ? ? G NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 403 P HOH 103 1_555 ? ? ? ? ? ? ? 2.264 ? ? metalc18 metalc ? ? H NA . NA ? ? ? 1_555 B DC 3 OP1 ? ? A NA 404 D DC 3 1_555 ? ? ? ? ? ? ? 2.948 ? ? metalc19 metalc ? ? H NA . NA ? ? ? 1_555 M HOH . O ? ? A NA 404 D HOH 101 1_555 ? ? ? ? ? ? ? 2.343 ? ? metalc20 metalc ? ? I NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 405 A HOH 509 1_655 ? ? ? ? ? ? ? 2.478 ? ? metalc21 metalc ? ? I NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 405 A HOH 516 1_555 ? ? ? ? ? ? ? 2.196 ? ? metalc22 metalc ? ? I NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 405 A HOH 518 1_655 ? ? ? ? ? ? ? 2.629 ? ? metalc23 metalc ? ? J NA . NA ? ? ? 1_555 K 42E . O1A ? ? A NA 406 A 42E 407 1_555 ? ? ? ? ? ? ? 2.816 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 D DC 5 N3 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 D DC 5 O2 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 D DC 5 N4 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DT 2 N3 ? ? ? 1_555 D DA 4 N1 ? ? D DT 2 T DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DT 2 O4 ? ? ? 1_555 D DA 4 N6 ? ? D DT 2 T DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 3 N3 ? ? ? 1_555 D DG 3 N1 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 3 N4 ? ? ? 1_555 D DG 3 O6 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 3 O2 ? ? ? 1_555 D DG 3 N2 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 4 N1 ? ? ? 1_555 D DC 2 N3 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 4 N2 ? ? ? 1_555 D DC 2 O2 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 4 O6 ? ? ? 1_555 D DC 2 N4 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DG 5 N1 ? ? ? 1_555 D DC 1 N3 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 5 N2 ? ? ? 1_555 D DC 1 O2 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 5 O6 ? ? ? 1_555 D DC 1 N4 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 16 N3 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 16 O2 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 16 N4 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 15 N1 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 15 O6 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 15 N2 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 14 N1 ? ? P DT 3 T DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 14 N6 ? ? P DT 3 T DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D DC 13 N3 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D DC 13 O2 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DC 13 N4 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 12 N3 ? ? P DA 5 T DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 12 O4 ? ? P DA 5 T DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 11 N1 ? ? P DT 6 T DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 11 N6 ? ? P DT 6 T DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D DC 10 N3 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DC 10 O2 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DG 7 O6 ? ? ? 1_555 D DC 10 N4 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 9 N1 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 9 O6 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 9 N2 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DG 9 N1 ? ? ? 1_555 D DC 8 N3 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DG 9 N2 ? ? ? 1_555 D DC 8 O2 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DG 9 O6 ? ? ? 1_555 D DC 8 N4 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DC 10 N3 ? ? ? 1_555 D DG 7 N1 ? ? P DC 10 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DC 10 N4 ? ? ? 1_555 D DG 7 O6 ? ? P DC 10 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DC 10 O2 ? ? ? 1_555 D DG 7 N2 ? ? P DC 10 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 276 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 274 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 277 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 275 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -4.57 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 5 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 152 ? PRO A 153 ? ILE A 150 PRO A 151 AA1 2 SER A 189 ? SER A 190 ? SER A 187 SER A 188 AA2 1 ILE A 176 ? VAL A 179 ? ILE A 174 VAL A 177 AA2 2 MET A 193 ? THR A 198 ? MET A 191 THR A 196 AA2 3 ARG A 255 ? LEU A 261 ? ARG A 253 LEU A 259 AA2 4 LYS A 236 ? CYS A 241 ? LYS A 234 CYS A 239 AA2 5 ILE A 226 ? LYS A 232 ? ILE A 224 LYS A 230 AA3 1 PHE A 293 ? ILE A 295 ? PHE A 291 ILE A 293 AA3 2 ILE A 300 ? PRO A 302 ? ILE A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 152 ? N ILE A 150 O SER A 190 ? O SER A 188 AA2 1 2 N THR A 178 ? N THR A 176 O LEU A 196 ? O LEU A 194 AA2 2 3 N LEU A 197 ? N LEU A 195 O ARG A 260 ? O ARG A 258 AA2 3 4 O ARG A 255 ? O ARG A 253 N CYS A 241 ? N CYS A 239 AA2 4 5 O MET A 238 ? O MET A 236 N SER A 231 ? N SER A 229 AA3 1 2 N THR A 294 ? N THR A 292 O ARG A 301 ? O ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PPV 401 ? 8 'binding site for residue PPV A 401' AC2 Software A NA 402 ? 4 'binding site for residue NA A 402' AC3 Software A NA 403 ? 6 'binding site for residue NA A 403' AC4 Software A NA 404 ? 5 'binding site for residue NA A 404' AC5 Software A NA 405 ? 5 'binding site for residue NA A 405' AC6 Software A NA 406 ? 2 'binding site for residue NA A 406' AC7 Software A 42E 407 ? 8 'binding site for residue 42E A 407' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 SER A 182 ? SER A 180 . ? 1_555 ? 2 AC1 8 ARG A 185 ? ARG A 183 . ? 1_555 ? 3 AC1 8 SER A 190 ? SER A 188 . ? 1_555 ? 4 AC1 8 GLY A 191 ? GLY A 189 . ? 1_555 ? 5 AC1 8 ASP A 192 ? ASP A 190 . ? 1_555 ? 6 AC1 8 NA F . ? NA A 402 . ? 1_555 ? 7 AC1 8 NA J . ? NA A 406 . ? 1_555 ? 8 AC1 8 42E K . ? 42E A 407 . ? 1_555 ? 9 AC2 4 ASP A 192 ? ASP A 190 . ? 1_555 ? 10 AC2 4 ASP A 194 ? ASP A 192 . ? 1_555 ? 11 AC2 4 PPV E . ? PPV A 401 . ? 1_555 ? 12 AC2 4 42E K . ? 42E A 407 . ? 1_555 ? 13 AC3 6 THR A 103 ? THR A 101 . ? 1_555 ? 14 AC3 6 VAL A 105 ? VAL A 103 . ? 1_555 ? 15 AC3 6 ILE A 108 ? ILE A 106 . ? 1_555 ? 16 AC3 6 HOH L . ? HOH A 538 . ? 1_555 ? 17 AC3 6 DG C 9 ? DG P 9 . ? 1_555 ? 18 AC3 6 HOH N . ? HOH P 103 . ? 1_555 ? 19 AC4 5 LYS A 62 ? LYS A 60 . ? 1_555 ? 20 AC4 5 LEU A 64 ? LEU A 62 . ? 1_555 ? 21 AC4 5 VAL A 67 ? VAL A 65 . ? 1_555 ? 22 AC4 5 DC B 3 ? DC D 3 . ? 1_555 ? 23 AC4 5 HOH M . ? HOH D 101 . ? 1_555 ? 24 AC5 5 SER A 32 ? SER A 30 . ? 1_555 ? 25 AC5 5 SER A 173 ? SER A 171 . ? 1_655 ? 26 AC5 5 HOH L . ? HOH A 509 . ? 1_655 ? 27 AC5 5 HOH L . ? HOH A 516 . ? 1_555 ? 28 AC5 5 HOH L . ? HOH A 518 . ? 1_655 ? 29 AC6 2 PPV E . ? PPV A 401 . ? 1_555 ? 30 AC6 2 42E K . ? 42E A 407 . ? 1_555 ? 31 AC7 8 ASP A 192 ? ASP A 190 . ? 1_555 ? 32 AC7 8 ASP A 194 ? ASP A 192 . ? 1_555 ? 33 AC7 8 TYR A 273 ? TYR A 271 . ? 1_555 ? 34 AC7 8 PPV E . ? PPV A 401 . ? 1_555 ? 35 AC7 8 NA F . ? NA A 402 . ? 1_555 ? 36 AC7 8 NA J . ? NA A 406 . ? 1_555 ? 37 AC7 8 DC C 10 ? DC P 10 . ? 1_555 ? 38 AC7 8 DG D 6 ? DG T 6 . ? 1_555 ? # _database_PDB_matrix.entry_id 5TBA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 5TBA _atom_sites.fract_transf_matrix[1][1] 0.018283 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005601 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012606 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019034 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -1 ? ? ? A . n A 1 2 GLY 2 0 ? ? ? A . n A 1 3 MET 3 1 ? ? ? A . n A 1 4 SER 4 2 ? ? ? A . n A 1 5 LYS 5 3 ? ? ? A . n A 1 6 ARG 6 4 ? ? ? A . n A 1 7 LYS 7 5 ? ? ? A . n A 1 8 ALA 8 6 ? ? ? A . n A 1 9 PRO 9 7 ? ? ? A . n A 1 10 GLN 10 8 ? ? ? A . n A 1 11 GLU 11 9 9 GLU GLU A . n A 1 12 THR 12 10 10 THR THR A . n A 1 13 LEU 13 11 11 LEU LEU A . n A 1 14 ASN 14 12 12 ASN ASN A . n A 1 15 GLY 15 13 13 GLY GLY A . n A 1 16 GLY 16 14 14 GLY GLY A . n A 1 17 ILE 17 15 15 ILE ILE A . n A 1 18 THR 18 16 16 THR THR A . n A 1 19 ASP 19 17 17 ASP ASP A . n A 1 20 MET 20 18 18 MET MET A . n A 1 21 LEU 21 19 19 LEU LEU A . n A 1 22 THR 22 20 20 THR THR A . n A 1 23 GLU 23 21 21 GLU GLU A . n A 1 24 LEU 24 22 22 LEU LEU A . n A 1 25 ALA 25 23 23 ALA ALA A . n A 1 26 ASN 26 24 24 ASN ASN A . n A 1 27 PHE 27 25 25 PHE PHE A . n A 1 28 GLU 28 26 26 GLU GLU A . n A 1 29 LYS 29 27 27 LYS LYS A . n A 1 30 ASN 30 28 28 ASN ASN A . n A 1 31 VAL 31 29 29 VAL VAL A . n A 1 32 SER 32 30 30 SER SER A . n A 1 33 GLN 33 31 31 GLN GLN A . n A 1 34 ALA 34 32 32 ALA ALA A . n A 1 35 ILE 35 33 33 ILE ILE A . n A 1 36 HIS 36 34 34 HIS HIS A . n A 1 37 LYS 37 35 35 LYS LYS A . n A 1 38 TYR 38 36 36 TYR TYR A . n A 1 39 ASN 39 37 37 ASN ASN A . n A 1 40 ALA 40 38 38 ALA ALA A . n A 1 41 TYR 41 39 39 TYR TYR A . n A 1 42 ARG 42 40 40 ARG ARG A . n A 1 43 LYS 43 41 41 LYS LYS A . n A 1 44 ALA 44 42 42 ALA ALA A . n A 1 45 ALA 45 43 43 ALA ALA A . n A 1 46 SER 46 44 44 SER SER A . n A 1 47 VAL 47 45 45 VAL VAL A . n A 1 48 ILE 48 46 46 ILE ILE A . n A 1 49 ALA 49 47 47 ALA ALA A . n A 1 50 LYS 50 48 48 LYS LYS A . n A 1 51 TYR 51 49 49 TYR TYR A . n A 1 52 PRO 52 50 50 PRO PRO A . n A 1 53 HIS 53 51 51 HIS HIS A . n A 1 54 LYS 54 52 52 LYS LYS A . n A 1 55 ILE 55 53 53 ILE ILE A . n A 1 56 LYS 56 54 54 LYS LYS A . n A 1 57 SER 57 55 55 SER SER A . n A 1 58 GLY 58 56 56 GLY GLY A . n A 1 59 ALA 59 57 57 ALA ALA A . n A 1 60 GLU 60 58 58 GLU GLU A . n A 1 61 ALA 61 59 59 ALA ALA A . n A 1 62 LYS 62 60 60 LYS LYS A . n A 1 63 LYS 63 61 61 LYS LYS A . n A 1 64 LEU 64 62 62 LEU LEU A . n A 1 65 PRO 65 63 63 PRO PRO A . n A 1 66 GLY 66 64 64 GLY GLY A . n A 1 67 VAL 67 65 65 VAL VAL A . n A 1 68 GLY 68 66 66 GLY GLY A . n A 1 69 THR 69 67 67 THR THR A . n A 1 70 LYS 70 68 68 LYS LYS A . n A 1 71 ILE 71 69 69 ILE ILE A . n A 1 72 ALA 72 70 70 ALA ALA A . n A 1 73 GLU 73 71 71 GLU GLU A . n A 1 74 LYS 74 72 72 LYS LYS A . n A 1 75 ILE 75 73 73 ILE ILE A . n A 1 76 ASP 76 74 74 ASP ASP A . n A 1 77 GLU 77 75 75 GLU GLU A . n A 1 78 PHE 78 76 76 PHE PHE A . n A 1 79 LEU 79 77 77 LEU LEU A . n A 1 80 ALA 80 78 78 ALA ALA A . n A 1 81 THR 81 79 79 THR THR A . n A 1 82 GLY 82 80 80 GLY GLY A . n A 1 83 LYS 83 81 81 LYS LYS A . n A 1 84 LEU 84 82 82 LEU LEU A . n A 1 85 ARG 85 83 83 ARG ARG A . n A 1 86 LYS 86 84 84 LYS LYS A . n A 1 87 LEU 87 85 85 LEU LEU A . n A 1 88 GLU 88 86 86 GLU GLU A . n A 1 89 LYS 89 87 87 LYS LYS A . n A 1 90 ILE 90 88 88 ILE ILE A . n A 1 91 ARG 91 89 89 ARG ARG A . n A 1 92 GLN 92 90 90 GLN GLN A . n A 1 93 ASP 93 91 91 ASP ASP A . n A 1 94 ASP 94 92 92 ASP ASP A . n A 1 95 THR 95 93 93 THR THR A . n A 1 96 SER 96 94 94 SER SER A . n A 1 97 SER 97 95 95 SER SER A . n A 1 98 SER 98 96 96 SER SER A . n A 1 99 ILE 99 97 97 ILE ILE A . n A 1 100 ASN 100 98 98 ASN ASN A . n A 1 101 PHE 101 99 99 PHE PHE A . n A 1 102 LEU 102 100 100 LEU LEU A . n A 1 103 THR 103 101 101 THR THR A . n A 1 104 ARG 104 102 102 ARG ARG A . n A 1 105 VAL 105 103 103 VAL VAL A . n A 1 106 SER 106 104 104 SER SER A . n A 1 107 GLY 107 105 105 GLY GLY A . n A 1 108 ILE 108 106 106 ILE ILE A . n A 1 109 GLY 109 107 107 GLY GLY A . n A 1 110 PRO 110 108 108 PRO PRO A . n A 1 111 SER 111 109 109 SER SER A . n A 1 112 ALA 112 110 110 ALA ALA A . n A 1 113 ALA 113 111 111 ALA ALA A . n A 1 114 ARG 114 112 112 ARG ARG A . n A 1 115 LYS 115 113 113 LYS LYS A . n A 1 116 PHE 116 114 114 PHE PHE A . n A 1 117 VAL 117 115 115 VAL VAL A . n A 1 118 ASP 118 116 116 ASP ASP A . n A 1 119 GLU 119 117 117 GLU GLU A . n A 1 120 GLY 120 118 118 GLY GLY A . n A 1 121 ILE 121 119 119 ILE ILE A . n A 1 122 LYS 122 120 120 LYS LYS A . n A 1 123 THR 123 121 121 THR THR A . n A 1 124 LEU 124 122 122 LEU LEU A . n A 1 125 GLU 125 123 123 GLU GLU A . n A 1 126 ASP 126 124 124 ASP ASP A . n A 1 127 LEU 127 125 125 LEU LEU A . n A 1 128 ARG 128 126 126 ARG ARG A . n A 1 129 LYS 129 127 127 LYS LYS A . n A 1 130 ASN 130 128 128 ASN ASN A . n A 1 131 GLU 131 129 129 GLU GLU A . n A 1 132 ASP 132 130 130 ASP ASP A . n A 1 133 LYS 133 131 131 LYS LYS A . n A 1 134 LEU 134 132 132 LEU LEU A . n A 1 135 ASN 135 133 133 ASN ASN A . n A 1 136 HIS 136 134 134 HIS HIS A . n A 1 137 HIS 137 135 135 HIS HIS A . n A 1 138 GLN 138 136 136 GLN GLN A . n A 1 139 ARG 139 137 137 ARG ARG A . n A 1 140 ILE 140 138 138 ILE ILE A . n A 1 141 GLY 141 139 139 GLY GLY A . n A 1 142 LEU 142 140 140 LEU LEU A . n A 1 143 LYS 143 141 141 LYS LYS A . n A 1 144 TYR 144 142 142 TYR TYR A . n A 1 145 PHE 145 143 143 PHE PHE A . n A 1 146 GLY 146 144 144 GLY GLY A . n A 1 147 ASP 147 145 145 ASP ASP A . n A 1 148 PHE 148 146 146 PHE PHE A . n A 1 149 GLU 149 147 147 GLU GLU A . n A 1 150 LYS 150 148 148 LYS LYS A . n A 1 151 ARG 151 149 149 ARG ARG A . n A 1 152 ILE 152 150 150 ILE ILE A . n A 1 153 PRO 153 151 151 PRO PRO A . n A 1 154 ARG 154 152 152 ARG ARG A . n A 1 155 GLU 155 153 153 GLU GLU A . n A 1 156 GLU 156 154 154 GLU GLU A . n A 1 157 MET 157 155 155 MET MET A . n A 1 158 LEU 158 156 156 LEU LEU A . n A 1 159 GLN 159 157 157 GLN GLN A . n A 1 160 MET 160 158 158 MET MET A . n A 1 161 GLN 161 159 159 GLN GLN A . n A 1 162 ASP 162 160 160 ASP ASP A . n A 1 163 ILE 163 161 161 ILE ILE A . n A 1 164 VAL 164 162 162 VAL VAL A . n A 1 165 LEU 165 163 163 LEU LEU A . n A 1 166 ASN 166 164 164 ASN ASN A . n A 1 167 GLU 167 165 165 GLU GLU A . n A 1 168 VAL 168 166 166 VAL VAL A . n A 1 169 LYS 169 167 167 LYS LYS A . n A 1 170 LYS 170 168 168 LYS LYS A . n A 1 171 VAL 171 169 169 VAL VAL A . n A 1 172 ASP 172 170 170 ASP ASP A . n A 1 173 SER 173 171 171 SER SER A . n A 1 174 GLU 174 172 172 GLU GLU A . n A 1 175 TYR 175 173 173 TYR TYR A . n A 1 176 ILE 176 174 174 ILE ILE A . n A 1 177 ALA 177 175 175 ALA ALA A . n A 1 178 THR 178 176 176 THR THR A . n A 1 179 VAL 179 177 177 VAL VAL A . n A 1 180 CYS 180 178 178 CYS CYS A . n A 1 181 GLY 181 179 179 GLY GLY A . n A 1 182 SER 182 180 180 SER SER A . n A 1 183 PHE 183 181 181 PHE PHE A . n A 1 184 ARG 184 182 182 ARG ARG A . n A 1 185 ARG 185 183 183 ARG ARG A . n A 1 186 GLY 186 184 184 GLY GLY A . n A 1 187 ALA 187 185 185 ALA ALA A . n A 1 188 GLU 188 186 186 GLU GLU A . n A 1 189 SER 189 187 187 SER SER A . n A 1 190 SER 190 188 188 SER SER A . n A 1 191 GLY 191 189 189 GLY GLY A . n A 1 192 ASP 192 190 190 ASP ASP A . n A 1 193 MET 193 191 191 MET MET A . n A 1 194 ASP 194 192 192 ASP ASP A . n A 1 195 VAL 195 193 193 VAL VAL A . n A 1 196 LEU 196 194 194 LEU LEU A . n A 1 197 LEU 197 195 195 LEU LEU A . n A 1 198 THR 198 196 196 THR THR A . n A 1 199 HIS 199 197 197 HIS HIS A . n A 1 200 PRO 200 198 198 PRO PRO A . n A 1 201 SER 201 199 199 SER SER A . n A 1 202 PHE 202 200 200 PHE PHE A . n A 1 203 THR 203 201 201 THR THR A . n A 1 204 SER 204 202 202 SER SER A . n A 1 205 GLU 205 203 203 GLU GLU A . n A 1 206 SER 206 204 204 SER SER A . n A 1 207 THR 207 205 ? ? ? A . n A 1 208 LYS 208 206 ? ? ? A . n A 1 209 GLN 209 207 207 GLN GLN A . n A 1 210 PRO 210 208 208 PRO PRO A . n A 1 211 LYS 211 209 209 LYS LYS A . n A 1 212 LEU 212 210 210 LEU LEU A . n A 1 213 LEU 213 211 211 LEU LEU A . n A 1 214 HIS 214 212 212 HIS HIS A . n A 1 215 GLN 215 213 213 GLN GLN A . n A 1 216 VAL 216 214 214 VAL VAL A . n A 1 217 VAL 217 215 215 VAL VAL A . n A 1 218 GLU 218 216 216 GLU GLU A . n A 1 219 GLN 219 217 217 GLN GLN A . n A 1 220 LEU 220 218 218 LEU LEU A . n A 1 221 GLN 221 219 219 GLN GLN A . n A 1 222 LYS 222 220 220 LYS LYS A . n A 1 223 VAL 223 221 221 VAL VAL A . n A 1 224 HIS 224 222 222 HIS HIS A . n A 1 225 PHE 225 223 223 PHE PHE A . n A 1 226 ILE 226 224 224 ILE ILE A . n A 1 227 THR 227 225 225 THR THR A . n A 1 228 ASP 228 226 226 ASP ASP A . n A 1 229 THR 229 227 227 THR THR A . n A 1 230 LEU 230 228 228 LEU LEU A . n A 1 231 SER 231 229 229 SER SER A . n A 1 232 LYS 232 230 230 LYS LYS A . n A 1 233 GLY 233 231 231 GLY GLY A . n A 1 234 GLU 234 232 232 GLU GLU A . n A 1 235 THR 235 233 233 THR THR A . n A 1 236 LYS 236 234 234 LYS LYS A . n A 1 237 PHE 237 235 235 PHE PHE A . n A 1 238 MET 238 236 236 MET MET A . n A 1 239 GLY 239 237 237 GLY GLY A . n A 1 240 VAL 240 238 238 VAL VAL A . n A 1 241 CYS 241 239 239 CYS CYS A . n A 1 242 GLN 242 240 240 GLN GLN A . n A 1 243 LEU 243 241 241 LEU LEU A . n A 1 244 PRO 244 242 242 PRO PRO A . n A 1 245 SER 245 243 243 SER SER A . n A 1 246 LYS 246 244 244 LYS LYS A . n A 1 247 ASN 247 245 245 ASN ASN A . n A 1 248 ASP 248 246 246 ASP ASP A . n A 1 249 GLU 249 247 247 GLU GLU A . n A 1 250 LYS 250 248 248 LYS LYS A . n A 1 251 GLU 251 249 249 GLU GLU A . n A 1 252 TYR 252 250 250 TYR TYR A . n A 1 253 PRO 253 251 251 PRO PRO A . n A 1 254 HIS 254 252 252 HIS HIS A . n A 1 255 ARG 255 253 253 ARG ARG A . n A 1 256 ARG 256 254 254 ARG ARG A . n A 1 257 ILE 257 255 255 ILE ILE A . n A 1 258 ASP 258 256 256 ASP ASP A . n A 1 259 ILE 259 257 257 ILE ILE A . n A 1 260 ARG 260 258 258 ARG ARG A . n A 1 261 LEU 261 259 259 LEU LEU A . n A 1 262 ILE 262 260 260 ILE ILE A . n A 1 263 PRO 263 261 261 PRO PRO A . n A 1 264 LYS 264 262 262 LYS LYS A . n A 1 265 ASP 265 263 263 ASP ASP A . n A 1 266 GLN 266 264 264 GLN GLN A . n A 1 267 TYR 267 265 265 TYR TYR A . n A 1 268 TYR 268 266 266 TYR TYR A . n A 1 269 CYS 269 267 267 CYS CYS A . n A 1 270 GLY 270 268 268 GLY GLY A . n A 1 271 VAL 271 269 269 VAL VAL A . n A 1 272 LEU 272 270 270 LEU LEU A . n A 1 273 TYR 273 271 271 TYR TYR A . n A 1 274 PHE 274 272 272 PHE PHE A . n A 1 275 THR 275 273 273 THR THR A . n A 1 276 GLY 276 274 274 GLY GLY A . n A 1 277 SER 277 275 275 SER SER A . n A 1 278 ASP 278 276 276 ASP ASP A . n A 1 279 ILE 279 277 277 ILE ILE A . n A 1 280 PHE 280 278 278 PHE PHE A . n A 1 281 ASN 281 279 279 ASN ASN A . n A 1 282 LYS 282 280 280 LYS LYS A . n A 1 283 ASN 283 281 281 ASN ASN A . n A 1 284 MET 284 282 282 MET MET A . n A 1 285 ARG 285 283 283 ARG ARG A . n A 1 286 ALA 286 284 284 ALA ALA A . n A 1 287 HIS 287 285 285 HIS HIS A . n A 1 288 ALA 288 286 ? ? ? A . n A 1 289 LEU 289 287 ? ? ? A . n A 1 290 GLU 290 288 ? ? ? A . n A 1 291 LYS 291 289 289 LYS LYS A . n A 1 292 GLY 292 290 290 GLY GLY A . n A 1 293 PHE 293 291 291 PHE PHE A . n A 1 294 THR 294 292 292 THR THR A . n A 1 295 ILE 295 293 293 ILE ILE A . n A 1 296 ASN 296 294 294 ASN ASN A . n A 1 297 GLU 297 295 295 GLU GLU A . n A 1 298 TYR 298 296 296 TYR TYR A . n A 1 299 THR 299 297 297 THR THR A . n A 1 300 ILE 300 298 298 ILE ILE A . n A 1 301 ARG 301 299 299 ARG ARG A . n A 1 302 PRO 302 300 300 PRO PRO A . n A 1 303 LEU 303 301 301 LEU LEU A . n A 1 304 GLY 304 302 302 GLY GLY A . n A 1 305 VAL 305 303 303 VAL VAL A . n A 1 306 THR 306 304 304 THR THR A . n A 1 307 GLY 307 305 305 GLY GLY A . n A 1 308 VAL 308 306 306 VAL VAL A . n A 1 309 ALA 309 307 307 ALA ALA A . n A 1 310 GLY 310 308 308 GLY GLY A . n A 1 311 GLU 311 309 309 GLU GLU A . n A 1 312 PRO 312 310 310 PRO PRO A . n A 1 313 LEU 313 311 311 LEU LEU A . n A 1 314 PRO 314 312 312 PRO PRO A . n A 1 315 VAL 315 313 313 VAL VAL A . n A 1 316 ASP 316 314 314 ASP ASP A . n A 1 317 SER 317 315 315 SER SER A . n A 1 318 GLU 318 316 316 GLU GLU A . n A 1 319 LYS 319 317 317 LYS LYS A . n A 1 320 ASP 320 318 318 ASP ASP A . n A 1 321 ILE 321 319 319 ILE ILE A . n A 1 322 PHE 322 320 320 PHE PHE A . n A 1 323 ASP 323 321 321 ASP ASP A . n A 1 324 TYR 324 322 322 TYR TYR A . n A 1 325 ILE 325 323 323 ILE ILE A . n A 1 326 GLN 326 324 324 GLN GLN A . n A 1 327 TRP 327 325 325 TRP TRP A . n A 1 328 LYS 328 326 ? ? ? A . n A 1 329 TYR 329 327 ? ? ? A . n A 1 330 ARG 330 328 ? ? ? A . n A 1 331 GLU 331 329 329 GLU GLU A . n A 1 332 PRO 332 330 330 PRO PRO A . n A 1 333 LYS 333 331 331 LYS LYS A . n A 1 334 ASP 334 332 332 ASP ASP A . n A 1 335 ARG 335 333 333 ARG ARG A . n A 1 336 SER 336 334 ? ? ? A . n A 1 337 GLU 337 335 ? ? ? A . n A 1 338 HIS 338 336 ? ? ? A . n A 1 339 HIS 339 337 ? ? ? A . n A 1 340 HIS 340 338 ? ? ? A . n A 1 341 HIS 341 339 ? ? ? A . n A 1 342 HIS 342 340 ? ? ? A . n A 1 343 HIS 343 341 ? ? ? A . n B 2 1 DG 1 1 1 DG DG D . n B 2 2 DT 2 2 2 DT DT D . n B 2 3 DC 3 3 3 DC DC D . n B 2 4 DG 4 4 4 DG DG D . n B 2 5 DG 5 5 5 DG DG D . n C 3 1 DG 1 1 1 DG DG P . n C 3 2 DC 2 2 2 DC DC P . n C 3 3 DT 3 3 3 DT DT P . n C 3 4 DG 4 4 4 DG DG P . n C 3 5 DA 5 5 5 DA DA P . n C 3 6 DT 6 6 6 DT DT P . n C 3 7 DG 7 7 7 DG DG P . n C 3 8 DC 8 8 8 DC DC P . n C 3 9 DG 9 9 9 DG DG P . n C 3 10 DC 10 10 10 DC DC P . n D 4 1 DC 1 1 1 DC DC T . n D 4 2 DC 2 2 2 DC DC T . n D 4 3 DG 3 3 3 DG DG T . n D 4 4 DA 4 4 4 DA DA T . n D 4 5 DC 5 5 5 DC DC T . n D 4 6 DG 6 6 6 DG DG T . n D 4 7 DG 7 7 7 DG DG T . n D 4 8 DC 8 8 8 DC DC T . n D 4 9 DG 9 9 9 DG DG T . n D 4 10 DC 10 10 10 DC DC T . n D 4 11 DA 11 11 11 DA DA T . n D 4 12 DT 12 12 12 DT DT T . n D 4 13 DC 13 13 13 DC DC T . n D 4 14 DA 14 14 14 DA DA T . n D 4 15 DG 15 15 15 DG DG T . n D 4 16 DC 16 16 16 DC DC T . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 PPV 1 401 401 PPV PPV A . F 6 NA 1 402 402 NA NA A . G 6 NA 1 403 403 NA NA A . H 6 NA 1 404 404 NA NA A . I 6 NA 1 405 405 NA NA A . J 6 NA 1 406 406 NA NA A . K 7 42E 1 407 101 42E 42E A . L 8 HOH 1 501 524 HOH HOH A . L 8 HOH 2 502 509 HOH HOH A . L 8 HOH 3 503 538 HOH HOH A . L 8 HOH 4 504 531 HOH HOH A . L 8 HOH 5 505 506 HOH HOH A . L 8 HOH 6 506 520 HOH HOH A . L 8 HOH 7 507 542 HOH HOH A . L 8 HOH 8 508 515 HOH HOH A . L 8 HOH 9 509 537 HOH HOH A . L 8 HOH 10 510 523 HOH HOH A . L 8 HOH 11 511 539 HOH HOH A . L 8 HOH 12 512 501 HOH HOH A . L 8 HOH 13 513 516 HOH HOH A . L 8 HOH 14 514 541 HOH HOH A . L 8 HOH 15 515 527 HOH HOH A . L 8 HOH 16 516 536 HOH HOH A . L 8 HOH 17 517 533 HOH HOH A . L 8 HOH 18 518 502 HOH HOH A . L 8 HOH 19 519 514 HOH HOH A . L 8 HOH 20 520 503 HOH HOH A . L 8 HOH 21 521 513 HOH HOH A . L 8 HOH 22 522 511 HOH HOH A . L 8 HOH 23 523 507 HOH HOH A . L 8 HOH 24 524 510 HOH HOH A . L 8 HOH 25 525 543 HOH HOH A . L 8 HOH 26 526 521 HOH HOH A . L 8 HOH 27 527 534 HOH HOH A . L 8 HOH 28 528 544 HOH HOH A . L 8 HOH 29 529 504 HOH HOH A . L 8 HOH 30 530 540 HOH HOH A . L 8 HOH 31 531 528 HOH HOH A . L 8 HOH 32 532 517 HOH HOH A . L 8 HOH 33 533 518 HOH HOH A . L 8 HOH 34 534 525 HOH HOH A . L 8 HOH 35 535 529 HOH HOH A . L 8 HOH 36 536 522 HOH HOH A . L 8 HOH 37 537 519 HOH HOH A . L 8 HOH 38 538 505 HOH HOH A . L 8 HOH 39 539 526 HOH HOH A . L 8 HOH 40 540 535 HOH HOH A . L 8 HOH 41 541 512 HOH HOH A . L 8 HOH 42 542 508 HOH HOH A . L 8 HOH 43 543 530 HOH HOH A . L 8 HOH 44 544 532 HOH HOH A . M 8 HOH 1 101 101 HOH HOH D . N 8 HOH 1 101 203 HOH HOH P . N 8 HOH 2 102 207 HOH HOH P . N 8 HOH 3 103 209 HOH HOH P . N 8 HOH 4 104 201 HOH HOH P . N 8 HOH 5 105 204 HOH HOH P . N 8 HOH 6 106 205 HOH HOH P . N 8 HOH 7 107 206 HOH HOH P . N 8 HOH 8 108 208 HOH HOH P . N 8 HOH 9 109 202 HOH HOH P . O 8 HOH 1 101 105 HOH HOH T . O 8 HOH 2 102 104 HOH HOH T . O 8 HOH 3 103 102 HOH HOH T . O 8 HOH 4 104 101 HOH HOH T . O 8 HOH 5 105 103 HOH HOH T . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5080 ? 1 MORE -85 ? 1 'SSA (A^2)' 21190 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A SER 32 ? A SER 30 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 OG ? A SER 173 ? A SER 171 ? 1_555 45.9 ? 2 O ? A SER 32 ? A SER 30 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? L HOH . ? A HOH 509 ? 1_655 169.5 ? 3 OG ? A SER 173 ? A SER 171 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? L HOH . ? A HOH 509 ? 1_655 136.1 ? 4 O ? A SER 32 ? A SER 30 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? L HOH . ? A HOH 516 ? 1_555 82.0 ? 5 OG ? A SER 173 ? A SER 171 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? L HOH . ? A HOH 516 ? 1_555 44.8 ? 6 O ? L HOH . ? A HOH 509 ? 1_655 NA ? I NA . ? A NA 405 ? 1_555 O ? L HOH . ? A HOH 516 ? 1_555 105.5 ? 7 O ? A SER 32 ? A SER 30 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? L HOH . ? A HOH 518 ? 1_655 89.0 ? 8 OG ? A SER 173 ? A SER 171 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? L HOH . ? A HOH 518 ? 1_655 126.0 ? 9 O ? L HOH . ? A HOH 509 ? 1_655 NA ? I NA . ? A NA 405 ? 1_555 O ? L HOH . ? A HOH 518 ? 1_655 83.0 ? 10 O ? L HOH . ? A HOH 516 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? L HOH . ? A HOH 518 ? 1_655 170.6 ? 11 O ? A LYS 62 ? A LYS 60 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? A LEU 64 ? A LEU 62 ? 1_555 91.3 ? 12 O ? A LYS 62 ? A LYS 60 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? A VAL 67 ? A VAL 65 ? 1_555 81.3 ? 13 O ? A LEU 64 ? A LEU 62 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? A VAL 67 ? A VAL 65 ? 1_555 82.3 ? 14 O ? A LYS 62 ? A LYS 60 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 160.7 ? 15 O ? A LEU 64 ? A LEU 62 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 81.5 ? 16 O ? A VAL 67 ? A VAL 65 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 80.0 ? 17 O ? A LYS 62 ? A LYS 60 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? M HOH . ? D HOH 101 ? 1_555 87.5 ? 18 O ? A LEU 64 ? A LEU 62 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? M HOH . ? D HOH 101 ? 1_555 165.5 ? 19 O ? A VAL 67 ? A VAL 65 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? M HOH . ? D HOH 101 ? 1_555 83.2 ? 20 OP1 ? B DC 3 ? D DC 3 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? M HOH . ? D HOH 101 ? 1_555 95.0 ? 21 O ? A THR 103 ? A THR 101 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? A VAL 105 ? A VAL 103 ? 1_555 85.9 ? 22 O ? A THR 103 ? A THR 101 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? A ILE 108 ? A ILE 106 ? 1_555 93.4 ? 23 O ? A VAL 105 ? A VAL 103 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? A ILE 108 ? A ILE 106 ? 1_555 87.8 ? 24 O ? A THR 103 ? A THR 101 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? L HOH . ? A HOH 538 ? 1_555 82.3 ? 25 O ? A VAL 105 ? A VAL 103 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? L HOH . ? A HOH 538 ? 1_555 86.3 ? 26 O ? A ILE 108 ? A ILE 106 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? L HOH . ? A HOH 538 ? 1_555 172.9 ? 27 O ? A THR 103 ? A THR 101 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 168.2 ? 28 O ? A VAL 105 ? A VAL 103 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 96.7 ? 29 O ? A ILE 108 ? A ILE 106 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 98.2 ? 30 O ? L HOH . ? A HOH 538 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 86.4 ? 31 O ? A THR 103 ? A THR 101 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? N HOH . ? P HOH 103 ? 1_555 86.5 ? 32 O ? A VAL 105 ? A VAL 103 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? N HOH . ? P HOH 103 ? 1_555 172.4 ? 33 O ? A ILE 108 ? A ILE 106 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? N HOH . ? P HOH 103 ? 1_555 92.0 ? 34 O ? L HOH . ? A HOH 538 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? N HOH . ? P HOH 103 ? 1_555 93.4 ? 35 OP1 ? C DG 9 ? P DG 9 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? N HOH . ? P HOH 103 ? 1_555 90.8 ? 36 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 97.8 ? 37 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O11 ? E PPV . ? A PPV 401 ? 1_555 78.3 ? 38 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O11 ? E PPV . ? A PPV 401 ? 1_555 125.9 ? 39 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O21 ? E PPV . ? A PPV 401 ? 1_555 87.2 ? 40 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O21 ? E PPV . ? A PPV 401 ? 1_555 174.9 ? 41 O11 ? E PPV . ? A PPV 401 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O21 ? E PPV . ? A PPV 401 ? 1_555 54.0 ? 42 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O2A ? K 42E . ? A 42E 407 ? 1_555 94.9 ? 43 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O2A ? K 42E . ? A 42E 407 ? 1_555 74.2 ? 44 O11 ? E PPV . ? A PPV 401 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O2A ? K 42E . ? A 42E 407 ? 1_555 159.2 ? 45 O21 ? E PPV . ? A PPV 401 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O2A ? K 42E . ? A 42E 407 ? 1_555 106.5 ? 46 O21 ? E PPV . ? A PPV 401 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O1A ? K 42E . ? A 42E 407 ? 1_555 102.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-01-11 2 'Structure model' 1 1 2017-01-25 3 'Structure model' 1 2 2017-09-13 4 'Structure model' 1 3 2019-11-27 5 'Structure model' 1 4 2023-02-01 6 'Structure model' 1 5 2023-10-04 7 'Structure model' 1 6 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Author supporting evidence' 5 5 'Structure model' Advisory 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 6 'Structure model' 'Data collection' 9 7 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_audit_support 2 3 'Structure model' pdbx_database_PDB_obs_spr 3 4 'Structure model' pdbx_audit_support 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_database_PDB_obs_spr 6 5 'Structure model' pdbx_struct_conn_angle 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_conn_type 9 6 'Structure model' chem_comp_atom 10 6 'Structure model' chem_comp_bond 11 7 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_audit_support.funding_organization' 2 4 'Structure model' '_pdbx_audit_support.funding_organization' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 21 5 'Structure model' '_pdbx_struct_conn_angle.value' 22 5 'Structure model' '_struct_conn.conn_type_id' 23 5 'Structure model' '_struct_conn.id' 24 5 'Structure model' '_struct_conn.pdbx_dist_value' 25 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 26 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 27 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 28 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 33 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 34 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 35 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 36 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 37 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 38 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 39 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 40 5 'Structure model' '_struct_conn.ptnr2_symmetry' 41 5 'Structure model' '_struct_conn_type.id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 3 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0073 4 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.479 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.128 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 170 ? ? -168.63 118.31 2 1 CYS A 178 ? ? -100.09 -147.45 3 1 ASP A 190 ? ? -165.22 -166.96 4 1 PRO A 208 ? ? -67.69 48.78 5 1 ASN A 281 ? ? -57.28 -71.27 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLN _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 207 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 PRO _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 208 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 147.71 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -1 ? A MET 1 2 1 Y 1 A GLY 0 ? A GLY 2 3 1 Y 1 A MET 1 ? A MET 3 4 1 Y 1 A SER 2 ? A SER 4 5 1 Y 1 A LYS 3 ? A LYS 5 6 1 Y 1 A ARG 4 ? A ARG 6 7 1 Y 1 A LYS 5 ? A LYS 7 8 1 Y 1 A ALA 6 ? A ALA 8 9 1 Y 1 A PRO 7 ? A PRO 9 10 1 Y 1 A GLN 8 ? A GLN 10 11 1 Y 1 A THR 205 ? A THR 207 12 1 Y 1 A LYS 206 ? A LYS 208 13 1 Y 1 A ALA 286 ? A ALA 288 14 1 Y 1 A LEU 287 ? A LEU 289 15 1 Y 1 A GLU 288 ? A GLU 290 16 1 Y 1 A LYS 326 ? A LYS 328 17 1 Y 1 A TYR 327 ? A TYR 329 18 1 Y 1 A ARG 328 ? A ARG 330 19 1 Y 1 A SER 334 ? A SER 336 20 1 Y 1 A GLU 335 ? A GLU 337 21 1 Y 1 A HIS 336 ? A HIS 338 22 1 Y 1 A HIS 337 ? A HIS 339 23 1 Y 1 A HIS 338 ? A HIS 340 24 1 Y 1 A HIS 339 ? A HIS 341 25 1 Y 1 A HIS 340 ? A HIS 342 26 1 Y 1 A HIS 341 ? A HIS 343 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 42E PA P N N 1 42E O1A O N N 2 42E O2A O N N 3 42E "O5'" O N N 4 42E "C5'" C N N 5 42E "C4'" C N R 6 42E "O4'" O N N 7 42E "S3'" S N N 8 42E "C2'" C N N 9 42E "C1'" C N S 10 42E N1 N N N 11 42E C2 C N N 12 42E O2 O N N 13 42E N3 N N N 14 42E C4 C N N 15 42E N4 N N N 16 42E C5 C N N 17 42E C6 C N N 18 42E H2 H N N 19 42E H3 H N N 20 42E H4 H N N 21 42E H5 H N N 22 42E H6 H N N 23 42E H7 H N N 24 42E H8 H N N 25 42E H9 H N N 26 42E H10 H N N 27 42E H11 H N N 28 42E H12 H N N 29 42E OP3 O N N 30 42E H1 H N N 31 ALA N N N N 32 ALA CA C N S 33 ALA C C N N 34 ALA O O N N 35 ALA CB C N N 36 ALA OXT O N N 37 ALA H H N N 38 ALA H2 H N N 39 ALA HA H N N 40 ALA HB1 H N N 41 ALA HB2 H N N 42 ALA HB3 H N N 43 ALA HXT H N N 44 ARG N N N N 45 ARG CA C N S 46 ARG C C N N 47 ARG O O N N 48 ARG CB C N N 49 ARG CG C N N 50 ARG CD C N N 51 ARG NE N N N 52 ARG CZ C N N 53 ARG NH1 N N N 54 ARG NH2 N N N 55 ARG OXT O N N 56 ARG H H N N 57 ARG H2 H N N 58 ARG HA H N N 59 ARG HB2 H N N 60 ARG HB3 H N N 61 ARG HG2 H N N 62 ARG HG3 H N N 63 ARG HD2 H N N 64 ARG HD3 H N N 65 ARG HE H N N 66 ARG HH11 H N N 67 ARG HH12 H N N 68 ARG HH21 H N N 69 ARG HH22 H N N 70 ARG HXT H N N 71 ASN N N N N 72 ASN CA C N S 73 ASN C C N N 74 ASN O O N N 75 ASN CB C N N 76 ASN CG C N N 77 ASN OD1 O N N 78 ASN ND2 N N N 79 ASN OXT O N N 80 ASN H H N N 81 ASN H2 H N N 82 ASN HA H N N 83 ASN HB2 H N N 84 ASN HB3 H N N 85 ASN HD21 H N N 86 ASN HD22 H N N 87 ASN HXT H N N 88 ASP N N N N 89 ASP CA C N S 90 ASP C C N N 91 ASP O O N N 92 ASP CB C N N 93 ASP CG C N N 94 ASP OD1 O N N 95 ASP OD2 O N N 96 ASP OXT O N N 97 ASP H H N N 98 ASP H2 H N N 99 ASP HA H N N 100 ASP HB2 H N N 101 ASP HB3 H N N 102 ASP HD2 H N N 103 ASP HXT H N N 104 CYS N N N N 105 CYS CA C N R 106 CYS C C N N 107 CYS O O N N 108 CYS CB C N N 109 CYS SG S N N 110 CYS OXT O N N 111 CYS H H N N 112 CYS H2 H N N 113 CYS HA H N N 114 CYS HB2 H N N 115 CYS HB3 H N N 116 CYS HG H N N 117 CYS HXT H N N 118 DA OP3 O N N 119 DA P P N N 120 DA OP1 O N N 121 DA OP2 O N N 122 DA "O5'" O N N 123 DA "C5'" C N N 124 DA "C4'" C N R 125 DA "O4'" O N N 126 DA "C3'" C N S 127 DA "O3'" O N N 128 DA "C2'" C N N 129 DA "C1'" C N R 130 DA N9 N Y N 131 DA C8 C Y N 132 DA N7 N Y N 133 DA C5 C Y N 134 DA C6 C Y N 135 DA N6 N N N 136 DA N1 N Y N 137 DA C2 C Y N 138 DA N3 N Y N 139 DA C4 C Y N 140 DA HOP3 H N N 141 DA HOP2 H N N 142 DA "H5'" H N N 143 DA "H5''" H N N 144 DA "H4'" H N N 145 DA "H3'" H N N 146 DA "HO3'" H N N 147 DA "H2'" H N N 148 DA "H2''" H N N 149 DA "H1'" H N N 150 DA H8 H N N 151 DA H61 H N N 152 DA H62 H N N 153 DA H2 H N N 154 DC OP3 O N N 155 DC P P N N 156 DC OP1 O N N 157 DC OP2 O N N 158 DC "O5'" O N N 159 DC "C5'" C N N 160 DC "C4'" C N R 161 DC "O4'" O N N 162 DC "C3'" C N S 163 DC "O3'" O N N 164 DC "C2'" C N N 165 DC "C1'" C N R 166 DC N1 N N N 167 DC C2 C N N 168 DC O2 O N N 169 DC N3 N N N 170 DC C4 C N N 171 DC N4 N N N 172 DC C5 C N N 173 DC C6 C N N 174 DC HOP3 H N N 175 DC HOP2 H N N 176 DC "H5'" H N N 177 DC "H5''" H N N 178 DC "H4'" H N N 179 DC "H3'" H N N 180 DC "HO3'" H N N 181 DC "H2'" H N N 182 DC "H2''" H N N 183 DC "H1'" H N N 184 DC H41 H N N 185 DC H42 H N N 186 DC H5 H N N 187 DC H6 H N N 188 DG OP3 O N N 189 DG P P N N 190 DG OP1 O N N 191 DG OP2 O N N 192 DG "O5'" O N N 193 DG "C5'" C N N 194 DG "C4'" C N R 195 DG "O4'" O N N 196 DG "C3'" C N S 197 DG "O3'" O N N 198 DG "C2'" C N N 199 DG "C1'" C N R 200 DG N9 N Y N 201 DG C8 C Y N 202 DG N7 N Y N 203 DG C5 C Y N 204 DG C6 C N N 205 DG O6 O N N 206 DG N1 N N N 207 DG C2 C N N 208 DG N2 N N N 209 DG N3 N N N 210 DG C4 C Y N 211 DG HOP3 H N N 212 DG HOP2 H N N 213 DG "H5'" H N N 214 DG "H5''" H N N 215 DG "H4'" H N N 216 DG "H3'" H N N 217 DG "HO3'" H N N 218 DG "H2'" H N N 219 DG "H2''" H N N 220 DG "H1'" H N N 221 DG H8 H N N 222 DG H1 H N N 223 DG H21 H N N 224 DG H22 H N N 225 DT OP3 O N N 226 DT P P N N 227 DT OP1 O N N 228 DT OP2 O N N 229 DT "O5'" O N N 230 DT "C5'" C N N 231 DT "C4'" C N R 232 DT "O4'" O N N 233 DT "C3'" C N S 234 DT "O3'" O N N 235 DT "C2'" C N N 236 DT "C1'" C N R 237 DT N1 N N N 238 DT C2 C N N 239 DT O2 O N N 240 DT N3 N N N 241 DT C4 C N N 242 DT O4 O N N 243 DT C5 C N N 244 DT C7 C N N 245 DT C6 C N N 246 DT HOP3 H N N 247 DT HOP2 H N N 248 DT "H5'" H N N 249 DT "H5''" H N N 250 DT "H4'" H N N 251 DT "H3'" H N N 252 DT "HO3'" H N N 253 DT "H2'" H N N 254 DT "H2''" H N N 255 DT "H1'" H N N 256 DT H3 H N N 257 DT H71 H N N 258 DT H72 H N N 259 DT H73 H N N 260 DT H6 H N N 261 GLN N N N N 262 GLN CA C N S 263 GLN C C N N 264 GLN O O N N 265 GLN CB C N N 266 GLN CG C N N 267 GLN CD C N N 268 GLN OE1 O N N 269 GLN NE2 N N N 270 GLN OXT O N N 271 GLN H H N N 272 GLN H2 H N N 273 GLN HA H N N 274 GLN HB2 H N N 275 GLN HB3 H N N 276 GLN HG2 H N N 277 GLN HG3 H N N 278 GLN HE21 H N N 279 GLN HE22 H N N 280 GLN HXT H N N 281 GLU N N N N 282 GLU CA C N S 283 GLU C C N N 284 GLU O O N N 285 GLU CB C N N 286 GLU CG C N N 287 GLU CD C N N 288 GLU OE1 O N N 289 GLU OE2 O N N 290 GLU OXT O N N 291 GLU H H N N 292 GLU H2 H N N 293 GLU HA H N N 294 GLU HB2 H N N 295 GLU HB3 H N N 296 GLU HG2 H N N 297 GLU HG3 H N N 298 GLU HE2 H N N 299 GLU HXT H N N 300 GLY N N N N 301 GLY CA C N N 302 GLY C C N N 303 GLY O O N N 304 GLY OXT O N N 305 GLY H H N N 306 GLY H2 H N N 307 GLY HA2 H N N 308 GLY HA3 H N N 309 GLY HXT H N N 310 HIS N N N N 311 HIS CA C N S 312 HIS C C N N 313 HIS O O N N 314 HIS CB C N N 315 HIS CG C Y N 316 HIS ND1 N Y N 317 HIS CD2 C Y N 318 HIS CE1 C Y N 319 HIS NE2 N Y N 320 HIS OXT O N N 321 HIS H H N N 322 HIS H2 H N N 323 HIS HA H N N 324 HIS HB2 H N N 325 HIS HB3 H N N 326 HIS HD1 H N N 327 HIS HD2 H N N 328 HIS HE1 H N N 329 HIS HE2 H N N 330 HIS HXT H N N 331 HOH O O N N 332 HOH H1 H N N 333 HOH H2 H N N 334 ILE N N N N 335 ILE CA C N S 336 ILE C C N N 337 ILE O O N N 338 ILE CB C N S 339 ILE CG1 C N N 340 ILE CG2 C N N 341 ILE CD1 C N N 342 ILE OXT O N N 343 ILE H H N N 344 ILE H2 H N N 345 ILE HA H N N 346 ILE HB H N N 347 ILE HG12 H N N 348 ILE HG13 H N N 349 ILE HG21 H N N 350 ILE HG22 H N N 351 ILE HG23 H N N 352 ILE HD11 H N N 353 ILE HD12 H N N 354 ILE HD13 H N N 355 ILE HXT H N N 356 LEU N N N N 357 LEU CA C N S 358 LEU C C N N 359 LEU O O N N 360 LEU CB C N N 361 LEU CG C N N 362 LEU CD1 C N N 363 LEU CD2 C N N 364 LEU OXT O N N 365 LEU H H N N 366 LEU H2 H N N 367 LEU HA H N N 368 LEU HB2 H N N 369 LEU HB3 H N N 370 LEU HG H N N 371 LEU HD11 H N N 372 LEU HD12 H N N 373 LEU HD13 H N N 374 LEU HD21 H N N 375 LEU HD22 H N N 376 LEU HD23 H N N 377 LEU HXT H N N 378 LYS N N N N 379 LYS CA C N S 380 LYS C C N N 381 LYS O O N N 382 LYS CB C N N 383 LYS CG C N N 384 LYS CD C N N 385 LYS CE C N N 386 LYS NZ N N N 387 LYS OXT O N N 388 LYS H H N N 389 LYS H2 H N N 390 LYS HA H N N 391 LYS HB2 H N N 392 LYS HB3 H N N 393 LYS HG2 H N N 394 LYS HG3 H N N 395 LYS HD2 H N N 396 LYS HD3 H N N 397 LYS HE2 H N N 398 LYS HE3 H N N 399 LYS HZ1 H N N 400 LYS HZ2 H N N 401 LYS HZ3 H N N 402 LYS HXT H N N 403 MET N N N N 404 MET CA C N S 405 MET C C N N 406 MET O O N N 407 MET CB C N N 408 MET CG C N N 409 MET SD S N N 410 MET CE C N N 411 MET OXT O N N 412 MET H H N N 413 MET H2 H N N 414 MET HA H N N 415 MET HB2 H N N 416 MET HB3 H N N 417 MET HG2 H N N 418 MET HG3 H N N 419 MET HE1 H N N 420 MET HE2 H N N 421 MET HE3 H N N 422 MET HXT H N N 423 NA NA NA N N 424 PHE N N N N 425 PHE CA C N S 426 PHE C C N N 427 PHE O O N N 428 PHE CB C N N 429 PHE CG C Y N 430 PHE CD1 C Y N 431 PHE CD2 C Y N 432 PHE CE1 C Y N 433 PHE CE2 C Y N 434 PHE CZ C Y N 435 PHE OXT O N N 436 PHE H H N N 437 PHE H2 H N N 438 PHE HA H N N 439 PHE HB2 H N N 440 PHE HB3 H N N 441 PHE HD1 H N N 442 PHE HD2 H N N 443 PHE HE1 H N N 444 PHE HE2 H N N 445 PHE HZ H N N 446 PHE HXT H N N 447 PPV O11 O N N 448 PPV P1 P N N 449 PPV O21 O N N 450 PPV O31 O N N 451 PPV OPP O N N 452 PPV P2 P N N 453 PPV O12 O N N 454 PPV O22 O N N 455 PPV O32 O N N 456 PPV H11 H N N 457 PPV H21 H N N 458 PPV H12 H N N 459 PPV H32 H N N 460 PRO N N N N 461 PRO CA C N S 462 PRO C C N N 463 PRO O O N N 464 PRO CB C N N 465 PRO CG C N N 466 PRO CD C N N 467 PRO OXT O N N 468 PRO H H N N 469 PRO HA H N N 470 PRO HB2 H N N 471 PRO HB3 H N N 472 PRO HG2 H N N 473 PRO HG3 H N N 474 PRO HD2 H N N 475 PRO HD3 H N N 476 PRO HXT H N N 477 SER N N N N 478 SER CA C N S 479 SER C C N N 480 SER O O N N 481 SER CB C N N 482 SER OG O N N 483 SER OXT O N N 484 SER H H N N 485 SER H2 H N N 486 SER HA H N N 487 SER HB2 H N N 488 SER HB3 H N N 489 SER HG H N N 490 SER HXT H N N 491 THR N N N N 492 THR CA C N S 493 THR C C N N 494 THR O O N N 495 THR CB C N R 496 THR OG1 O N N 497 THR CG2 C N N 498 THR OXT O N N 499 THR H H N N 500 THR H2 H N N 501 THR HA H N N 502 THR HB H N N 503 THR HG1 H N N 504 THR HG21 H N N 505 THR HG22 H N N 506 THR HG23 H N N 507 THR HXT H N N 508 TRP N N N N 509 TRP CA C N S 510 TRP C C N N 511 TRP O O N N 512 TRP CB C N N 513 TRP CG C Y N 514 TRP CD1 C Y N 515 TRP CD2 C Y N 516 TRP NE1 N Y N 517 TRP CE2 C Y N 518 TRP CE3 C Y N 519 TRP CZ2 C Y N 520 TRP CZ3 C Y N 521 TRP CH2 C Y N 522 TRP OXT O N N 523 TRP H H N N 524 TRP H2 H N N 525 TRP HA H N N 526 TRP HB2 H N N 527 TRP HB3 H N N 528 TRP HD1 H N N 529 TRP HE1 H N N 530 TRP HE3 H N N 531 TRP HZ2 H N N 532 TRP HZ3 H N N 533 TRP HH2 H N N 534 TRP HXT H N N 535 TYR N N N N 536 TYR CA C N S 537 TYR C C N N 538 TYR O O N N 539 TYR CB C N N 540 TYR CG C Y N 541 TYR CD1 C Y N 542 TYR CD2 C Y N 543 TYR CE1 C Y N 544 TYR CE2 C Y N 545 TYR CZ C Y N 546 TYR OH O N N 547 TYR OXT O N N 548 TYR H H N N 549 TYR H2 H N N 550 TYR HA H N N 551 TYR HB2 H N N 552 TYR HB3 H N N 553 TYR HD1 H N N 554 TYR HD2 H N N 555 TYR HE1 H N N 556 TYR HE2 H N N 557 TYR HH H N N 558 TYR HXT H N N 559 VAL N N N N 560 VAL CA C N S 561 VAL C C N N 562 VAL O O N N 563 VAL CB C N N 564 VAL CG1 C N N 565 VAL CG2 C N N 566 VAL OXT O N N 567 VAL H H N N 568 VAL H2 H N N 569 VAL HA H N N 570 VAL HB H N N 571 VAL HG11 H N N 572 VAL HG12 H N N 573 VAL HG13 H N N 574 VAL HG21 H N N 575 VAL HG22 H N N 576 VAL HG23 H N N 577 VAL HXT H N N 578 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 42E O1A PA doub N N 1 42E O2A PA sing N N 2 42E PA "O5'" sing N N 3 42E "O5'" "C5'" sing N N 4 42E "C5'" "C4'" sing N N 5 42E "S3'" "C4'" sing N N 6 42E "S3'" "C2'" sing N N 7 42E C5 C6 doub N N 8 42E C5 C4 sing N N 9 42E "C4'" "O4'" sing N N 10 42E C6 N1 sing N N 11 42E N4 C4 sing N N 12 42E C4 N3 doub N N 13 42E "C2'" "C1'" sing N N 14 42E "O4'" "C1'" sing N N 15 42E N1 "C1'" sing N N 16 42E N1 C2 sing N N 17 42E N3 C2 sing N N 18 42E C2 O2 doub N N 19 42E O2A H2 sing N N 20 42E "C5'" H3 sing N N 21 42E "C5'" H4 sing N N 22 42E "C4'" H5 sing N N 23 42E "C2'" H6 sing N N 24 42E "C2'" H7 sing N N 25 42E "C1'" H8 sing N N 26 42E N4 H9 sing N N 27 42E N4 H10 sing N N 28 42E C5 H11 sing N N 29 42E C6 H12 sing N N 30 42E PA OP3 sing N N 31 42E OP3 H1 sing N N 32 ALA N CA sing N N 33 ALA N H sing N N 34 ALA N H2 sing N N 35 ALA CA C sing N N 36 ALA CA CB sing N N 37 ALA CA HA sing N N 38 ALA C O doub N N 39 ALA C OXT sing N N 40 ALA CB HB1 sing N N 41 ALA CB HB2 sing N N 42 ALA CB HB3 sing N N 43 ALA OXT HXT sing N N 44 ARG N CA sing N N 45 ARG N H sing N N 46 ARG N H2 sing N N 47 ARG CA C sing N N 48 ARG CA CB sing N N 49 ARG CA HA sing N N 50 ARG C O doub N N 51 ARG C OXT sing N N 52 ARG CB CG sing N N 53 ARG CB HB2 sing N N 54 ARG CB HB3 sing N N 55 ARG CG CD sing N N 56 ARG CG HG2 sing N N 57 ARG CG HG3 sing N N 58 ARG CD NE sing N N 59 ARG CD HD2 sing N N 60 ARG CD HD3 sing N N 61 ARG NE CZ sing N N 62 ARG NE HE sing N N 63 ARG CZ NH1 sing N N 64 ARG CZ NH2 doub N N 65 ARG NH1 HH11 sing N N 66 ARG NH1 HH12 sing N N 67 ARG NH2 HH21 sing N N 68 ARG NH2 HH22 sing N N 69 ARG OXT HXT sing N N 70 ASN N CA sing N N 71 ASN N H sing N N 72 ASN N H2 sing N N 73 ASN CA C sing N N 74 ASN CA CB sing N N 75 ASN CA HA sing N N 76 ASN C O doub N N 77 ASN C OXT sing N N 78 ASN CB CG sing N N 79 ASN CB HB2 sing N N 80 ASN CB HB3 sing N N 81 ASN CG OD1 doub N N 82 ASN CG ND2 sing N N 83 ASN ND2 HD21 sing N N 84 ASN ND2 HD22 sing N N 85 ASN OXT HXT sing N N 86 ASP N CA sing N N 87 ASP N H sing N N 88 ASP N H2 sing N N 89 ASP CA C sing N N 90 ASP CA CB sing N N 91 ASP CA HA sing N N 92 ASP C O doub N N 93 ASP C OXT sing N N 94 ASP CB CG sing N N 95 ASP CB HB2 sing N N 96 ASP CB HB3 sing N N 97 ASP CG OD1 doub N N 98 ASP CG OD2 sing N N 99 ASP OD2 HD2 sing N N 100 ASP OXT HXT sing N N 101 CYS N CA sing N N 102 CYS N H sing N N 103 CYS N H2 sing N N 104 CYS CA C sing N N 105 CYS CA CB sing N N 106 CYS CA HA sing N N 107 CYS C O doub N N 108 CYS C OXT sing N N 109 CYS CB SG sing N N 110 CYS CB HB2 sing N N 111 CYS CB HB3 sing N N 112 CYS SG HG sing N N 113 CYS OXT HXT sing N N 114 DA OP3 P sing N N 115 DA OP3 HOP3 sing N N 116 DA P OP1 doub N N 117 DA P OP2 sing N N 118 DA P "O5'" sing N N 119 DA OP2 HOP2 sing N N 120 DA "O5'" "C5'" sing N N 121 DA "C5'" "C4'" sing N N 122 DA "C5'" "H5'" sing N N 123 DA "C5'" "H5''" sing N N 124 DA "C4'" "O4'" sing N N 125 DA "C4'" "C3'" sing N N 126 DA "C4'" "H4'" sing N N 127 DA "O4'" "C1'" sing N N 128 DA "C3'" "O3'" sing N N 129 DA "C3'" "C2'" sing N N 130 DA "C3'" "H3'" sing N N 131 DA "O3'" "HO3'" sing N N 132 DA "C2'" "C1'" sing N N 133 DA "C2'" "H2'" sing N N 134 DA "C2'" "H2''" sing N N 135 DA "C1'" N9 sing N N 136 DA "C1'" "H1'" sing N N 137 DA N9 C8 sing Y N 138 DA N9 C4 sing Y N 139 DA C8 N7 doub Y N 140 DA C8 H8 sing N N 141 DA N7 C5 sing Y N 142 DA C5 C6 sing Y N 143 DA C5 C4 doub Y N 144 DA C6 N6 sing N N 145 DA C6 N1 doub Y N 146 DA N6 H61 sing N N 147 DA N6 H62 sing N N 148 DA N1 C2 sing Y N 149 DA C2 N3 doub Y N 150 DA C2 H2 sing N N 151 DA N3 C4 sing Y N 152 DC OP3 P sing N N 153 DC OP3 HOP3 sing N N 154 DC P OP1 doub N N 155 DC P OP2 sing N N 156 DC P "O5'" sing N N 157 DC OP2 HOP2 sing N N 158 DC "O5'" "C5'" sing N N 159 DC "C5'" "C4'" sing N N 160 DC "C5'" "H5'" sing N N 161 DC "C5'" "H5''" sing N N 162 DC "C4'" "O4'" sing N N 163 DC "C4'" "C3'" sing N N 164 DC "C4'" "H4'" sing N N 165 DC "O4'" "C1'" sing N N 166 DC "C3'" "O3'" sing N N 167 DC "C3'" "C2'" sing N N 168 DC "C3'" "H3'" sing N N 169 DC "O3'" "HO3'" sing N N 170 DC "C2'" "C1'" sing N N 171 DC "C2'" "H2'" sing N N 172 DC "C2'" "H2''" sing N N 173 DC "C1'" N1 sing N N 174 DC "C1'" "H1'" sing N N 175 DC N1 C2 sing N N 176 DC N1 C6 sing N N 177 DC C2 O2 doub N N 178 DC C2 N3 sing N N 179 DC N3 C4 doub N N 180 DC C4 N4 sing N N 181 DC C4 C5 sing N N 182 DC N4 H41 sing N N 183 DC N4 H42 sing N N 184 DC C5 C6 doub N N 185 DC C5 H5 sing N N 186 DC C6 H6 sing N N 187 DG OP3 P sing N N 188 DG OP3 HOP3 sing N N 189 DG P OP1 doub N N 190 DG P OP2 sing N N 191 DG P "O5'" sing N N 192 DG OP2 HOP2 sing N N 193 DG "O5'" "C5'" sing N N 194 DG "C5'" "C4'" sing N N 195 DG "C5'" "H5'" sing N N 196 DG "C5'" "H5''" sing N N 197 DG "C4'" "O4'" sing N N 198 DG "C4'" "C3'" sing N N 199 DG "C4'" "H4'" sing N N 200 DG "O4'" "C1'" sing N N 201 DG "C3'" "O3'" sing N N 202 DG "C3'" "C2'" sing N N 203 DG "C3'" "H3'" sing N N 204 DG "O3'" "HO3'" sing N N 205 DG "C2'" "C1'" sing N N 206 DG "C2'" "H2'" sing N N 207 DG "C2'" "H2''" sing N N 208 DG "C1'" N9 sing N N 209 DG "C1'" "H1'" sing N N 210 DG N9 C8 sing Y N 211 DG N9 C4 sing Y N 212 DG C8 N7 doub Y N 213 DG C8 H8 sing N N 214 DG N7 C5 sing Y N 215 DG C5 C6 sing N N 216 DG C5 C4 doub Y N 217 DG C6 O6 doub N N 218 DG C6 N1 sing N N 219 DG N1 C2 sing N N 220 DG N1 H1 sing N N 221 DG C2 N2 sing N N 222 DG C2 N3 doub N N 223 DG N2 H21 sing N N 224 DG N2 H22 sing N N 225 DG N3 C4 sing N N 226 DT OP3 P sing N N 227 DT OP3 HOP3 sing N N 228 DT P OP1 doub N N 229 DT P OP2 sing N N 230 DT P "O5'" sing N N 231 DT OP2 HOP2 sing N N 232 DT "O5'" "C5'" sing N N 233 DT "C5'" "C4'" sing N N 234 DT "C5'" "H5'" sing N N 235 DT "C5'" "H5''" sing N N 236 DT "C4'" "O4'" sing N N 237 DT "C4'" "C3'" sing N N 238 DT "C4'" "H4'" sing N N 239 DT "O4'" "C1'" sing N N 240 DT "C3'" "O3'" sing N N 241 DT "C3'" "C2'" sing N N 242 DT "C3'" "H3'" sing N N 243 DT "O3'" "HO3'" sing N N 244 DT "C2'" "C1'" sing N N 245 DT "C2'" "H2'" sing N N 246 DT "C2'" "H2''" sing N N 247 DT "C1'" N1 sing N N 248 DT "C1'" "H1'" sing N N 249 DT N1 C2 sing N N 250 DT N1 C6 sing N N 251 DT C2 O2 doub N N 252 DT C2 N3 sing N N 253 DT N3 C4 sing N N 254 DT N3 H3 sing N N 255 DT C4 O4 doub N N 256 DT C4 C5 sing N N 257 DT C5 C7 sing N N 258 DT C5 C6 doub N N 259 DT C7 H71 sing N N 260 DT C7 H72 sing N N 261 DT C7 H73 sing N N 262 DT C6 H6 sing N N 263 GLN N CA sing N N 264 GLN N H sing N N 265 GLN N H2 sing N N 266 GLN CA C sing N N 267 GLN CA CB sing N N 268 GLN CA HA sing N N 269 GLN C O doub N N 270 GLN C OXT sing N N 271 GLN CB CG sing N N 272 GLN CB HB2 sing N N 273 GLN CB HB3 sing N N 274 GLN CG CD sing N N 275 GLN CG HG2 sing N N 276 GLN CG HG3 sing N N 277 GLN CD OE1 doub N N 278 GLN CD NE2 sing N N 279 GLN NE2 HE21 sing N N 280 GLN NE2 HE22 sing N N 281 GLN OXT HXT sing N N 282 GLU N CA sing N N 283 GLU N H sing N N 284 GLU N H2 sing N N 285 GLU CA C sing N N 286 GLU CA CB sing N N 287 GLU CA HA sing N N 288 GLU C O doub N N 289 GLU C OXT sing N N 290 GLU CB CG sing N N 291 GLU CB HB2 sing N N 292 GLU CB HB3 sing N N 293 GLU CG CD sing N N 294 GLU CG HG2 sing N N 295 GLU CG HG3 sing N N 296 GLU CD OE1 doub N N 297 GLU CD OE2 sing N N 298 GLU OE2 HE2 sing N N 299 GLU OXT HXT sing N N 300 GLY N CA sing N N 301 GLY N H sing N N 302 GLY N H2 sing N N 303 GLY CA C sing N N 304 GLY CA HA2 sing N N 305 GLY CA HA3 sing N N 306 GLY C O doub N N 307 GLY C OXT sing N N 308 GLY OXT HXT sing N N 309 HIS N CA sing N N 310 HIS N H sing N N 311 HIS N H2 sing N N 312 HIS CA C sing N N 313 HIS CA CB sing N N 314 HIS CA HA sing N N 315 HIS C O doub N N 316 HIS C OXT sing N N 317 HIS CB CG sing N N 318 HIS CB HB2 sing N N 319 HIS CB HB3 sing N N 320 HIS CG ND1 sing Y N 321 HIS CG CD2 doub Y N 322 HIS ND1 CE1 doub Y N 323 HIS ND1 HD1 sing N N 324 HIS CD2 NE2 sing Y N 325 HIS CD2 HD2 sing N N 326 HIS CE1 NE2 sing Y N 327 HIS CE1 HE1 sing N N 328 HIS NE2 HE2 sing N N 329 HIS OXT HXT sing N N 330 HOH O H1 sing N N 331 HOH O H2 sing N N 332 ILE N CA sing N N 333 ILE N H sing N N 334 ILE N H2 sing N N 335 ILE CA C sing N N 336 ILE CA CB sing N N 337 ILE CA HA sing N N 338 ILE C O doub N N 339 ILE C OXT sing N N 340 ILE CB CG1 sing N N 341 ILE CB CG2 sing N N 342 ILE CB HB sing N N 343 ILE CG1 CD1 sing N N 344 ILE CG1 HG12 sing N N 345 ILE CG1 HG13 sing N N 346 ILE CG2 HG21 sing N N 347 ILE CG2 HG22 sing N N 348 ILE CG2 HG23 sing N N 349 ILE CD1 HD11 sing N N 350 ILE CD1 HD12 sing N N 351 ILE CD1 HD13 sing N N 352 ILE OXT HXT sing N N 353 LEU N CA sing N N 354 LEU N H sing N N 355 LEU N H2 sing N N 356 LEU CA C sing N N 357 LEU CA CB sing N N 358 LEU CA HA sing N N 359 LEU C O doub N N 360 LEU C OXT sing N N 361 LEU CB CG sing N N 362 LEU CB HB2 sing N N 363 LEU CB HB3 sing N N 364 LEU CG CD1 sing N N 365 LEU CG CD2 sing N N 366 LEU CG HG sing N N 367 LEU CD1 HD11 sing N N 368 LEU CD1 HD12 sing N N 369 LEU CD1 HD13 sing N N 370 LEU CD2 HD21 sing N N 371 LEU CD2 HD22 sing N N 372 LEU CD2 HD23 sing N N 373 LEU OXT HXT sing N N 374 LYS N CA sing N N 375 LYS N H sing N N 376 LYS N H2 sing N N 377 LYS CA C sing N N 378 LYS CA CB sing N N 379 LYS CA HA sing N N 380 LYS C O doub N N 381 LYS C OXT sing N N 382 LYS CB CG sing N N 383 LYS CB HB2 sing N N 384 LYS CB HB3 sing N N 385 LYS CG CD sing N N 386 LYS CG HG2 sing N N 387 LYS CG HG3 sing N N 388 LYS CD CE sing N N 389 LYS CD HD2 sing N N 390 LYS CD HD3 sing N N 391 LYS CE NZ sing N N 392 LYS CE HE2 sing N N 393 LYS CE HE3 sing N N 394 LYS NZ HZ1 sing N N 395 LYS NZ HZ2 sing N N 396 LYS NZ HZ3 sing N N 397 LYS OXT HXT sing N N 398 MET N CA sing N N 399 MET N H sing N N 400 MET N H2 sing N N 401 MET CA C sing N N 402 MET CA CB sing N N 403 MET CA HA sing N N 404 MET C O doub N N 405 MET C OXT sing N N 406 MET CB CG sing N N 407 MET CB HB2 sing N N 408 MET CB HB3 sing N N 409 MET CG SD sing N N 410 MET CG HG2 sing N N 411 MET CG HG3 sing N N 412 MET SD CE sing N N 413 MET CE HE1 sing N N 414 MET CE HE2 sing N N 415 MET CE HE3 sing N N 416 MET OXT HXT sing N N 417 PHE N CA sing N N 418 PHE N H sing N N 419 PHE N H2 sing N N 420 PHE CA C sing N N 421 PHE CA CB sing N N 422 PHE CA HA sing N N 423 PHE C O doub N N 424 PHE C OXT sing N N 425 PHE CB CG sing N N 426 PHE CB HB2 sing N N 427 PHE CB HB3 sing N N 428 PHE CG CD1 doub Y N 429 PHE CG CD2 sing Y N 430 PHE CD1 CE1 sing Y N 431 PHE CD1 HD1 sing N N 432 PHE CD2 CE2 doub Y N 433 PHE CD2 HD2 sing N N 434 PHE CE1 CZ doub Y N 435 PHE CE1 HE1 sing N N 436 PHE CE2 CZ sing Y N 437 PHE CE2 HE2 sing N N 438 PHE CZ HZ sing N N 439 PHE OXT HXT sing N N 440 PPV O11 P1 sing N N 441 PPV O11 H11 sing N N 442 PPV P1 O21 sing N N 443 PPV P1 O31 doub N N 444 PPV P1 OPP sing N N 445 PPV O21 H21 sing N N 446 PPV OPP P2 sing N N 447 PPV P2 O12 sing N N 448 PPV P2 O22 doub N N 449 PPV P2 O32 sing N N 450 PPV O12 H12 sing N N 451 PPV O32 H32 sing N N 452 PRO N CA sing N N 453 PRO N CD sing N N 454 PRO N H sing N N 455 PRO CA C sing N N 456 PRO CA CB sing N N 457 PRO CA HA sing N N 458 PRO C O doub N N 459 PRO C OXT sing N N 460 PRO CB CG sing N N 461 PRO CB HB2 sing N N 462 PRO CB HB3 sing N N 463 PRO CG CD sing N N 464 PRO CG HG2 sing N N 465 PRO CG HG3 sing N N 466 PRO CD HD2 sing N N 467 PRO CD HD3 sing N N 468 PRO OXT HXT sing N N 469 SER N CA sing N N 470 SER N H sing N N 471 SER N H2 sing N N 472 SER CA C sing N N 473 SER CA CB sing N N 474 SER CA HA sing N N 475 SER C O doub N N 476 SER C OXT sing N N 477 SER CB OG sing N N 478 SER CB HB2 sing N N 479 SER CB HB3 sing N N 480 SER OG HG sing N N 481 SER OXT HXT sing N N 482 THR N CA sing N N 483 THR N H sing N N 484 THR N H2 sing N N 485 THR CA C sing N N 486 THR CA CB sing N N 487 THR CA HA sing N N 488 THR C O doub N N 489 THR C OXT sing N N 490 THR CB OG1 sing N N 491 THR CB CG2 sing N N 492 THR CB HB sing N N 493 THR OG1 HG1 sing N N 494 THR CG2 HG21 sing N N 495 THR CG2 HG22 sing N N 496 THR CG2 HG23 sing N N 497 THR OXT HXT sing N N 498 TRP N CA sing N N 499 TRP N H sing N N 500 TRP N H2 sing N N 501 TRP CA C sing N N 502 TRP CA CB sing N N 503 TRP CA HA sing N N 504 TRP C O doub N N 505 TRP C OXT sing N N 506 TRP CB CG sing N N 507 TRP CB HB2 sing N N 508 TRP CB HB3 sing N N 509 TRP CG CD1 doub Y N 510 TRP CG CD2 sing Y N 511 TRP CD1 NE1 sing Y N 512 TRP CD1 HD1 sing N N 513 TRP CD2 CE2 doub Y N 514 TRP CD2 CE3 sing Y N 515 TRP NE1 CE2 sing Y N 516 TRP NE1 HE1 sing N N 517 TRP CE2 CZ2 sing Y N 518 TRP CE3 CZ3 doub Y N 519 TRP CE3 HE3 sing N N 520 TRP CZ2 CH2 doub Y N 521 TRP CZ2 HZ2 sing N N 522 TRP CZ3 CH2 sing Y N 523 TRP CZ3 HZ3 sing N N 524 TRP CH2 HH2 sing N N 525 TRP OXT HXT sing N N 526 TYR N CA sing N N 527 TYR N H sing N N 528 TYR N H2 sing N N 529 TYR CA C sing N N 530 TYR CA CB sing N N 531 TYR CA HA sing N N 532 TYR C O doub N N 533 TYR C OXT sing N N 534 TYR CB CG sing N N 535 TYR CB HB2 sing N N 536 TYR CB HB3 sing N N 537 TYR CG CD1 doub Y N 538 TYR CG CD2 sing Y N 539 TYR CD1 CE1 sing Y N 540 TYR CD1 HD1 sing N N 541 TYR CD2 CE2 doub Y N 542 TYR CD2 HD2 sing N N 543 TYR CE1 CZ doub Y N 544 TYR CE1 HE1 sing N N 545 TYR CE2 CZ sing Y N 546 TYR CE2 HE2 sing N N 547 TYR CZ OH sing N N 548 TYR OH HH sing N N 549 TYR OXT HXT sing N N 550 VAL N CA sing N N 551 VAL N H sing N N 552 VAL N H2 sing N N 553 VAL CA C sing N N 554 VAL CA CB sing N N 555 VAL CA HA sing N N 556 VAL C O doub N N 557 VAL C OXT sing N N 558 VAL CB CG1 sing N N 559 VAL CB CG2 sing N N 560 VAL CB HB sing N N 561 VAL CG1 HG11 sing N N 562 VAL CG1 HG12 sing N N 563 VAL CG1 HG13 sing N N 564 VAL CG2 HG21 sing N N 565 VAL CG2 HG22 sing N N 566 VAL CG2 HG23 sing N N 567 VAL OXT HXT sing N N 568 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5TBA 'double helix' 5TBA 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 D DC 5 1_555 0.007 -0.105 -0.448 -12.577 0.342 -1.205 1 D_DG1:DC5_T D 1 ? T 5 ? 19 1 1 B DT 2 1_555 D DA 4 1_555 -0.001 -0.014 0.063 -4.749 -5.302 -5.152 2 D_DT2:DA4_T D 2 ? T 4 ? 20 1 1 B DC 3 1_555 D DG 3 1_555 0.148 -0.153 0.121 -1.613 -6.076 -2.659 3 D_DC3:DG3_T D 3 ? T 3 ? 19 1 1 B DG 4 1_555 D DC 2 1_555 0.057 -0.357 -0.081 3.421 -2.699 -2.544 4 D_DG4:DC2_T D 4 ? T 2 ? 19 1 1 B DG 5 1_555 D DC 1 1_555 0.144 -0.345 0.361 11.044 -9.519 -3.026 5 D_DG5:DC1_T D 5 ? T 1 ? 19 1 1 C DG 1 1_555 D DC 16 1_555 0.048 -0.236 0.139 -6.200 -9.577 0.988 6 P_DG1:DC16_T P 1 ? T 16 ? 19 1 1 C DC 2 1_555 D DG 15 1_555 0.254 -0.209 0.015 -6.263 -7.607 0.317 7 P_DC2:DG15_T P 2 ? T 15 ? 19 1 1 C DT 3 1_555 D DA 14 1_555 -0.060 -0.103 -0.085 -0.048 -12.069 -5.128 8 P_DT3:DA14_T P 3 ? T 14 ? 20 1 1 C DG 4 1_555 D DC 13 1_555 -0.025 0.016 -0.042 1.702 -14.157 3.185 9 P_DG4:DC13_T P 4 ? T 13 ? 19 1 1 C DA 5 1_555 D DT 12 1_555 0.049 0.045 -0.103 -6.109 -9.537 2.061 10 P_DA5:DT12_T P 5 ? T 12 ? 20 1 1 C DT 6 1_555 D DA 11 1_555 -0.244 -0.041 0.013 -2.755 -12.085 0.086 11 P_DT6:DA11_T P 6 ? T 11 ? 20 1 1 C DG 7 1_555 D DC 10 1_555 -0.263 0.025 -0.073 -9.606 -12.819 -0.203 12 P_DG7:DC10_T P 7 ? T 10 ? 19 1 1 C DC 8 1_555 D DG 9 1_555 0.414 -0.149 0.011 -3.379 -7.793 0.227 13 P_DC8:DG9_T P 8 ? T 9 ? 19 1 1 C DG 9 1_555 D DC 8 1_555 -0.080 0.026 -0.435 -8.927 -10.997 -0.625 14 P_DG9:DC8_T P 9 ? T 8 ? 19 1 1 C DC 10 1_555 D DG 7 1_555 -0.071 0.020 -0.562 13.226 -1.758 -1.279 15 P_DC10:DG7_T P 10 ? T 7 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 D DC 5 1_555 B DT 2 1_555 D DA 4 1_555 -0.889 -0.338 3.124 -2.908 2.113 27.536 -1.195 1.177 3.165 4.415 6.077 27.765 1 DD_DG1DT2:DA4DC5_TT D 1 ? T 5 ? D 2 ? T 4 ? 1 B DT 2 1_555 D DA 4 1_555 B DC 3 1_555 D DG 3 1_555 0.662 -0.177 3.194 1.327 -2.546 36.518 0.062 -0.874 3.220 -4.055 -2.113 36.627 2 DD_DT2DC3:DG3DA4_TT D 2 ? T 4 ? D 3 ? T 3 ? 1 B DC 3 1_555 D DG 3 1_555 B DG 4 1_555 D DC 2 1_555 0.856 0.647 3.183 5.711 9.652 33.794 -0.380 -0.549 3.334 16.063 -9.505 35.555 3 DD_DC3DG4:DC2DG3_TT D 3 ? T 3 ? D 4 ? T 2 ? 1 B DG 4 1_555 D DC 2 1_555 B DG 5 1_555 D DC 1 1_555 -0.950 0.611 3.052 -5.823 -0.388 38.685 0.957 0.752 3.151 -0.582 8.729 39.106 4 DD_DG4DG5:DC1DC2_TT D 4 ? T 2 ? D 5 ? T 1 ? 1 C DG 1 1_555 D DC 16 1_555 C DC 2 1_555 D DG 15 1_555 -0.116 -0.465 3.237 3.686 7.787 35.281 -1.808 0.689 3.043 12.616 -5.972 36.285 5 PP_DG1DC2:DG15DC16_TT P 1 ? T 16 ? P 2 ? T 15 ? 1 C DC 2 1_555 D DG 15 1_555 C DT 3 1_555 D DA 14 1_555 -0.718 -0.378 3.159 2.766 1.656 31.004 -1.004 1.839 3.061 3.087 -5.156 31.167 6 PP_DC2DT3:DA14DG15_TT P 2 ? T 15 ? P 3 ? T 14 ? 1 C DT 3 1_555 D DA 14 1_555 C DG 4 1_555 D DC 13 1_555 0.718 0.112 3.283 0.679 6.974 35.133 -0.831 -1.070 3.258 11.414 -1.112 35.803 7 PP_DT3DG4:DC13DA14_TT P 3 ? T 14 ? P 4 ? T 13 ? 1 C DG 4 1_555 D DC 13 1_555 C DA 5 1_555 D DT 12 1_555 -0.216 -0.050 3.288 -2.432 0.645 41.542 -0.140 0.045 3.294 0.909 3.425 41.614 8 PP_DG4DA5:DT12DC13_TT P 4 ? T 13 ? P 5 ? T 12 ? 1 C DA 5 1_555 D DT 12 1_555 C DT 6 1_555 D DA 11 1_555 -0.476 -0.497 3.233 -1.877 -1.872 29.223 -0.579 0.537 3.281 -3.701 3.710 29.340 9 PP_DA5DT6:DA11DT12_TT P 5 ? T 12 ? P 6 ? T 11 ? 1 C DT 6 1_555 D DA 11 1_555 C DG 7 1_555 D DC 10 1_555 0.028 -0.043 3.391 -0.749 7.213 38.262 -0.972 -0.136 3.328 10.884 1.131 38.918 10 PP_DT6DG7:DC10DA11_TT P 6 ? T 11 ? P 7 ? T 10 ? 1 C DG 7 1_555 D DC 10 1_555 C DC 8 1_555 D DG 9 1_555 0.281 -0.322 3.153 -0.779 4.130 31.583 -1.308 -0.648 3.080 7.546 1.423 31.854 11 PP_DG7DC8:DG9DC10_TT P 7 ? T 10 ? P 8 ? T 9 ? 1 C DC 8 1_555 D DG 9 1_555 C DG 9 1_555 D DC 8 1_555 0.510 0.618 3.550 4.811 15.013 35.298 -1.178 -0.096 3.554 23.374 -7.490 38.556 12 PP_DC8DG9:DC8DG9_TT P 8 ? T 9 ? P 9 ? T 8 ? 1 C DG 9 1_555 D DC 8 1_555 C DC 10 1_555 D DG 7 1_555 0.624 0.062 2.798 1.509 2.729 24.934 -0.551 -1.051 2.820 6.289 -3.478 25.126 13 PP_DG9DC10:DG7DC8_TT P 9 ? T 8 ? P 10 ? T 7 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)' 'United States' ES024585 1 'National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)' 'United States' ES026821 2 'National Science Foundation (NSF, United States)' 'United States' MCB-0960961 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 PYROPHOSPHATE PPV 6 'SODIUM ION' NA 7 '[(2R,5S)-5-(4-amino-2-oxopyrimidin-1(2H)-yl)-1,3-oxathiolan-2-yl]methyl dihydrogen phosphate' 42E 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4RQ7 _pdbx_initial_refinement_model.details ? #