data_5TBN # _entry.id 5TBN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.319 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5TBN WWPDB D_1000223981 BMRB 30177 # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution NMR structure of PHF20 PHD domain in complex with a histone H3K4me2 peptide' _pdbx_database_related.db_id 30177 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5TBN _pdbx_database_status.recvd_initial_deposition_date 2016-09-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cui, G.' 1 'Botuyan, M.V.' 2 'Mer, G.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2211-1247 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 17 _citation.language ? _citation.page_first 1158 _citation.page_last 1170 _citation.title 'PHF20 Readers Link Methylation of Histone H3K4 and p53 with H4K16 Acetylation.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.celrep.2016.09.056 _citation.pdbx_database_id_PubMed 27760318 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Klein, B.J.' 1 ? primary 'Wang, X.' 2 ? primary 'Cui, G.' 3 ? primary 'Yuan, C.' 4 ? primary 'Botuyan, M.V.' 5 ? primary 'Lin, K.' 6 ? primary 'Lu, Y.' 7 ? primary 'Wang, X.' 8 ? primary 'Zhao, Y.' 9 ? primary 'Bruns, C.J.' 10 ? primary 'Mer, G.' 11 ? primary 'Shi, X.' 12 ? primary 'Kutateladze, T.G.' 13 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PHD finger protein 20' 6834.700 1 ? ? 'residues 646-699' ? 2 polymer syn 'Histone H3.1' 1276.490 1 ? ? 'residues 2-12' ? 3 non-polymer man 'ZINC ION' 65.409 2 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Glioma-expressed antigen 2,Hepatocellular carcinoma-associated antigen 58,Novel zinc finger protein,Transcription factor TZP' 2 'Histone H3/a,Histone H3/b,Histone H3/c,Histone H3/d,Histone H3/f,Histone H3/h,Histone H3/i,Histone H3/j,Histone H3/k,Histone H3/l' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no GHMDRYDFEVVRCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQD GHMDRYDFEVVRCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQD A ? 2 'polypeptide(L)' no yes 'ART(MLY)QTARKST(NH2)' ARTKQTARKSTX C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MET n 1 4 ASP n 1 5 ARG n 1 6 TYR n 1 7 ASP n 1 8 PHE n 1 9 GLU n 1 10 VAL n 1 11 VAL n 1 12 ARG n 1 13 CYS n 1 14 ILE n 1 15 CYS n 1 16 GLU n 1 17 VAL n 1 18 GLN n 1 19 GLU n 1 20 GLU n 1 21 ASN n 1 22 ASP n 1 23 PHE n 1 24 MET n 1 25 ILE n 1 26 GLN n 1 27 CYS n 1 28 GLU n 1 29 GLU n 1 30 CYS n 1 31 GLN n 1 32 CYS n 1 33 TRP n 1 34 GLN n 1 35 HIS n 1 36 GLY n 1 37 VAL n 1 38 CYS n 1 39 MET n 1 40 GLY n 1 41 LEU n 1 42 LEU n 1 43 GLU n 1 44 GLU n 1 45 ASN n 1 46 VAL n 1 47 PRO n 1 48 GLU n 1 49 LYS n 1 50 TYR n 1 51 THR n 1 52 CYS n 1 53 TYR n 1 54 VAL n 1 55 CYS n 1 56 GLN n 1 57 ASP n 2 1 ALA n 2 2 ARG n 2 3 THR n 2 4 MLY n 2 5 GLN n 2 6 THR n 2 7 ALA n 2 8 ARG n 2 9 LYS n 2 10 SER n 2 11 THR n 2 12 NH2 n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 57 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PHF20, C20orf104, GLEA2, HCA58, NZF, TZP' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 12 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name Human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP PHF20_HUMAN Q9BVI0 ? 1 DRYDFEVVRCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQD 646 2 UNP H31_HUMAN P68431 ? 2 ARTKQTARKST 2 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5TBN A 4 ? 57 ? Q9BVI0 646 ? 699 ? 0 53 2 2 5TBN C 1 ? 11 ? P68431 2 ? 12 ? 1 11 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5TBN GLY A 1 ? UNP Q9BVI0 ? ? 'expression tag' -3 1 1 5TBN HIS A 2 ? UNP Q9BVI0 ? ? 'expression tag' -2 2 1 5TBN MET A 3 ? UNP Q9BVI0 ? ? 'expression tag' -1 3 2 5TBN NH2 C 12 ? UNP P68431 ? ? amidation 12 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MLY 'L-peptide linking' n N-DIMETHYL-LYSINE ? 'C8 H18 N2 O2' 174.241 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N HSQC' 1 isotropic 2 1 1 '3D 1H-15N NOESY' 1 isotropic 3 1 2 '2D 1H-13C HSQC' 1 isotropic 4 1 2 '3D HNCACB' 1 isotropic 5 1 2 '3D CBCA(CO)NH' 1 isotropic 6 1 2 '3D HNCO' 1 isotropic 7 1 2 '3D NH(CA)CO' 1 isotropic 8 1 2 '3D HBHA(CO)NH' 1 isotropic 9 1 2 '3D CCH-TOCSY' 1 isotropic 10 1 2 '3D 1H-15N NOESY' 1 isotropic 11 1 2 '3D 1H-13C NOESY aliphatic' 1 isotropic 12 1 2 '3D 1H-13C NOESY aromatic' 1 isotropic 13 1 2 '3D 13C,15N-filtered, 13C/15N-edited NOESY' 1 isotropic 14 1 3 '2D 1H-13C HSQC' 1 isotropic 15 1 3 '2D 1H-1H NOESY' 1 isotropic 16 1 3 '2D 1H-1H COSY' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units Pa _pdbx_nmr_exptl_sample_conditions.pressure 101325 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength '20 mM sodium phosphate' _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err 0.2 _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '1.5 mM [U-15N] PHF20 PHD domain, 6.0 mM H3K4me2 peptide, 25 mM sodium phosphate, 0.3 mM DSS, 1.5 mM sodium azide, 90% H2O/10% D2O' '90% H2O/10% D2O' 15N_sample solution ? 2 ;1.5 mM [U-13C; U-15N] PHF20 PHD domain, 6.0 mM H3K4me2 peptide, 25 mM sodium phosphate, 0.3 mM DSS, 1.5 mM sodium azide, 90% H2O/10% D2O ; '90% H2O/10% D2O' 15N_13C_sample solution ? 3 '2 mM H3K4me2 peptide, 25 mM sodium phosphate, 0.3 mM DSS, 1.5 mM sodium azide, 90% H2O/10% D2O' '90% H2O/10% D2O' Natural_abundance solution ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE III' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.details Cryoprobe # _pdbx_nmr_refine.entry_id 5TBN _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 9 # _pdbx_nmr_ensemble.entry_id 5TBN _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5TBN _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 collection TopSpin ? 'Bruker Biospin' 2 'chemical shift assignment' NMRDraw ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 5 'chemical shift assignment' NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 3 'chemical shift assignment' NMRView ? 'Johnson, One Moon Scientific' 4 'peak picking' NMRView ? 'Johnson, One Moon Scientific' 6 'chemical shift assignment' SANE ? 'Duggan, Legge, Dyson & Wright' 7 processing NMRDraw ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 8 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 10 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 9 refinement Amber 14 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, and Kollman' 11 'data analysis' TALOS ? 'Cornilescu, Delaglio and Bax' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5TBN _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5TBN _struct.title 'Solution NMR structure of PHF20 PHD domain in complex with a histone H3K4me2 peptide' _struct.pdbx_descriptor 'PHD finger protein 20, Histone H3.1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5TBN _struct_keywords.text 'PHD finger, Methylated lysine, TRANSCRIPTION - STRUCTURAL PROTEIN complex' _struct_keywords.pdbx_keywords 'TRANSCRIPTION / STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id HIS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 35 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLY _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 40 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id HIS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 31 _struct_conf.end_auth_comp_id GLY _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 36 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A CYS 13 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 9 A ZN 801 1_555 ? ? ? ? ? ? ? 2.349 ? metalc2 metalc ? ? A CYS 15 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 11 A ZN 801 1_555 ? ? ? ? ? ? ? 2.349 ? metalc3 metalc ? ? A CYS 27 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 23 A ZN 800 1_555 ? ? ? ? ? ? ? 2.348 ? metalc4 metalc ? ? A CYS 30 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 26 A ZN 800 1_555 ? ? ? ? ? ? ? 2.350 ? metalc5 metalc ? ? A HIS 35 ND1 ? ? ? 1_555 D ZN . ZN ? ? A HIS 31 A ZN 801 1_555 ? ? ? ? ? ? ? 2.051 ? metalc6 metalc ? ? A CYS 38 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 34 A ZN 801 1_555 ? ? ? ? ? ? ? 2.340 ? metalc7 metalc ? ? A CYS 52 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 48 A ZN 800 1_555 ? ? ? ? ? ? ? 2.351 ? metalc8 metalc ? ? A CYS 55 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 51 A ZN 800 1_555 ? ? ? ? ? ? ? 2.348 ? covale1 covale both ? B THR 3 C ? ? ? 1_555 B MLY 4 N ? ? C THR 3 C MLY 4 1_555 ? ? ? ? ? ? ? 1.340 ? covale2 covale both ? B MLY 4 C ? ? ? 1_555 B GLN 5 N ? ? C MLY 4 C GLN 5 1_555 ? ? ? ? ? ? ? 1.337 ? covale3 covale both ? B THR 11 C ? ? ? 1_555 B NH2 12 N ? ? C THR 11 C NH2 12 1_555 ? ? ? ? ? ? ? 1.253 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 10 ? VAL A 11 ? VAL A 6 VAL A 7 AA1 2 CYS A 32 ? GLN A 34 ? CYS A 28 GLN A 30 AA1 3 PHE A 23 ? GLN A 26 ? PHE A 19 GLN A 22 AA1 4 THR B 3 ? GLN B 5 ? THR C 3 GLN C 5 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 10 ? N VAL A 6 O TRP A 33 ? O TRP A 29 AA1 2 3 O GLN A 34 ? O GLN A 30 N ILE A 25 ? N ILE A 21 AA1 3 4 N MET A 24 ? N MET A 20 O MLY B 4 ? O MLY C 4 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 800 ? 5 'binding site for residue ZN A 800' AC2 Software A ZN 801 ? 4 'binding site for residue ZN A 801' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 CYS A 27 ? CYS A 23 . ? 1_555 ? 2 AC1 5 CYS A 30 ? CYS A 26 . ? 1_555 ? 3 AC1 5 CYS A 32 ? CYS A 28 . ? 1_555 ? 4 AC1 5 CYS A 52 ? CYS A 48 . ? 1_555 ? 5 AC1 5 CYS A 55 ? CYS A 51 . ? 1_555 ? 6 AC2 4 CYS A 13 ? CYS A 9 . ? 1_555 ? 7 AC2 4 CYS A 15 ? CYS A 11 . ? 1_555 ? 8 AC2 4 HIS A 35 ? HIS A 31 . ? 1_555 ? 9 AC2 4 CYS A 38 ? CYS A 34 . ? 1_555 ? # _atom_sites.entry_id 5TBN _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol B C H N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -3 -3 GLY GLY A . n A 1 2 HIS 2 -2 -2 HIS HIS A . n A 1 3 MET 3 -1 -1 MET MET A . n A 1 4 ASP 4 0 646 ASP ASP A . n A 1 5 ARG 5 1 647 ARG ARG A . n A 1 6 TYR 6 2 648 TYR TYR A . n A 1 7 ASP 7 3 649 ASP ASP A . n A 1 8 PHE 8 4 650 PHE PHE A . n A 1 9 GLU 9 5 651 GLU GLU A . n A 1 10 VAL 10 6 652 VAL VAL A . n A 1 11 VAL 11 7 653 VAL VAL A . n A 1 12 ARG 12 8 654 ARG ARG A . n A 1 13 CYS 13 9 655 CYS CYS A . n A 1 14 ILE 14 10 656 ILE ILE A . n A 1 15 CYS 15 11 657 CYS CYS A . n A 1 16 GLU 16 12 658 GLU GLU A . n A 1 17 VAL 17 13 659 VAL VAL A . n A 1 18 GLN 18 14 660 GLN GLN A . n A 1 19 GLU 19 15 661 GLU GLU A . n A 1 20 GLU 20 16 662 GLU GLU A . n A 1 21 ASN 21 17 663 ASN ASN A . n A 1 22 ASP 22 18 664 ASP ASP A . n A 1 23 PHE 23 19 665 PHE PHE A . n A 1 24 MET 24 20 666 MET MET A . n A 1 25 ILE 25 21 667 ILE ILE A . n A 1 26 GLN 26 22 668 GLN GLN A . n A 1 27 CYS 27 23 669 CYS CYS A . n A 1 28 GLU 28 24 670 GLU GLU A . n A 1 29 GLU 29 25 671 GLU GLU A . n A 1 30 CYS 30 26 672 CYS CYS A . n A 1 31 GLN 31 27 673 GLN GLN A . n A 1 32 CYS 32 28 674 CYS CYS A . n A 1 33 TRP 33 29 675 TRP TRP A . n A 1 34 GLN 34 30 676 GLN GLN A . n A 1 35 HIS 35 31 677 HIS HIS A . n A 1 36 GLY 36 32 678 GLY GLY A . n A 1 37 VAL 37 33 679 VAL VAL A . n A 1 38 CYS 38 34 680 CYS CYS A . n A 1 39 MET 39 35 681 MET MET A . n A 1 40 GLY 40 36 682 GLY GLY A . n A 1 41 LEU 41 37 683 LEU LEU A . n A 1 42 LEU 42 38 684 LEU LEU A . n A 1 43 GLU 43 39 685 GLU GLU A . n A 1 44 GLU 44 40 686 GLU GLU A . n A 1 45 ASN 45 41 687 ASN ASN A . n A 1 46 VAL 46 42 688 VAL VAL A . n A 1 47 PRO 47 43 689 PRO PRO A . n A 1 48 GLU 48 44 690 GLU GLU A . n A 1 49 LYS 49 45 691 LYS LYS A . n A 1 50 TYR 50 46 692 TYR TYR A . n A 1 51 THR 51 47 693 THR THR A . n A 1 52 CYS 52 48 694 CYS CYS A . n A 1 53 TYR 53 49 695 TYR TYR A . n A 1 54 VAL 54 50 696 VAL VAL A . n A 1 55 CYS 55 51 697 CYS CYS A . n A 1 56 GLN 56 52 698 GLN GLN A . n A 1 57 ASP 57 53 699 ASP ASP A . n B 2 1 ALA 1 1 1 ALA ALA C . n B 2 2 ARG 2 2 2 ARG ARG C . n B 2 3 THR 3 3 3 THR THR C . n B 2 4 MLY 4 4 4 MLY MLY C . n B 2 5 GLN 5 5 5 GLN GLN C . n B 2 6 THR 6 6 6 THR THR C . n B 2 7 ALA 7 7 7 ALA ALA C . n B 2 8 ARG 8 8 8 ARG ARG C . n B 2 9 LYS 9 9 9 LYS LYS C . n B 2 10 SER 10 10 10 SER SER C . n B 2 11 THR 11 11 11 THR THR C . n B 2 12 NH2 12 12 11 NH2 THR C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 800 800 ZN ZN A . D 3 ZN 1 801 801 ZN ZN A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id MLY _pdbx_struct_mod_residue.label_seq_id 4 _pdbx_struct_mod_residue.auth_asym_id C _pdbx_struct_mod_residue.auth_comp_id MLY _pdbx_struct_mod_residue.auth_seq_id 4 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LYS _pdbx_struct_mod_residue.details 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1010 ? 1 MORE -6 ? 1 'SSA (A^2)' 5280 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 13 ? A CYS 9 ? 1_555 ZN ? D ZN . ? A ZN 801 ? 1_555 SG ? A CYS 15 ? A CYS 11 ? 1_555 110.0 ? 2 SG ? A CYS 13 ? A CYS 9 ? 1_555 ZN ? D ZN . ? A ZN 801 ? 1_555 ND1 ? A HIS 35 ? A HIS 31 ? 1_555 107.2 ? 3 SG ? A CYS 15 ? A CYS 11 ? 1_555 ZN ? D ZN . ? A ZN 801 ? 1_555 ND1 ? A HIS 35 ? A HIS 31 ? 1_555 116.4 ? 4 SG ? A CYS 13 ? A CYS 9 ? 1_555 ZN ? D ZN . ? A ZN 801 ? 1_555 SG ? A CYS 38 ? A CYS 34 ? 1_555 106.7 ? 5 SG ? A CYS 15 ? A CYS 11 ? 1_555 ZN ? D ZN . ? A ZN 801 ? 1_555 SG ? A CYS 38 ? A CYS 34 ? 1_555 105.5 ? 6 ND1 ? A HIS 35 ? A HIS 31 ? 1_555 ZN ? D ZN . ? A ZN 801 ? 1_555 SG ? A CYS 38 ? A CYS 34 ? 1_555 110.8 ? 7 SG ? A CYS 27 ? A CYS 23 ? 1_555 ZN ? C ZN . ? A ZN 800 ? 1_555 SG ? A CYS 30 ? A CYS 26 ? 1_555 111.3 ? 8 SG ? A CYS 27 ? A CYS 23 ? 1_555 ZN ? C ZN . ? A ZN 800 ? 1_555 SG ? A CYS 52 ? A CYS 48 ? 1_555 106.9 ? 9 SG ? A CYS 30 ? A CYS 26 ? 1_555 ZN ? C ZN . ? A ZN 800 ? 1_555 SG ? A CYS 52 ? A CYS 48 ? 1_555 110.3 ? 10 SG ? A CYS 27 ? A CYS 23 ? 1_555 ZN ? C ZN . ? A ZN 800 ? 1_555 SG ? A CYS 55 ? A CYS 51 ? 1_555 112.4 ? 11 SG ? A CYS 30 ? A CYS 26 ? 1_555 ZN ? C ZN . ? A ZN 800 ? 1_555 SG ? A CYS 55 ? A CYS 51 ? 1_555 104.2 ? 12 SG ? A CYS 52 ? A CYS 48 ? 1_555 ZN ? C ZN . ? A ZN 800 ? 1_555 SG ? A CYS 55 ? A CYS 51 ? 1_555 111.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-10-12 2 'Structure model' 1 1 2016-11-02 3 'Structure model' 1 2 2017-09-20 4 'Structure model' 1 3 2019-12-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Structure summary' 4 4 'Structure model' 'Author supporting evidence' 5 4 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' entity 2 3 'Structure model' pdbx_audit_support 3 4 'Structure model' pdbx_audit_support 4 4 'Structure model' pdbx_nmr_software 5 4 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_entity.pdbx_number_of_molecules' 2 3 'Structure model' '_pdbx_audit_support.funding_organization' 3 4 'Structure model' '_pdbx_audit_support.funding_organization' 4 4 'Structure model' '_pdbx_nmr_software.name' 5 4 'Structure model' '_pdbx_nmr_spectrometer.model' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'PHF20 PHD domain' 1.5 ? mM '[U-15N]' 1 'H3K4me2 peptide' 6.0 ? mM 'natural abundance' 1 'sodium phosphate' 25 ? mM 'natural abundance' 1 DSS 0.3 ? mM 'natural abundance' 1 'sodium azide' 1.5 ? mM 'natural abundance' 2 'PHF20 PHD domain' 1.5 ? mM '[U-13C; U-15N]' 2 'H3K4me2 peptide' 6.0 ? mM 'natural abundance' 2 'sodium phosphate' 25 ? mM 'natural abundance' 2 DSS 0.3 ? mM 'natural abundance' 2 'sodium azide' 1.5 ? mM 'natural abundance' 3 'H3K4me2 peptide' 2 ? mM 'natural abundance' 3 'sodium phosphate' 25 ? mM 'natural abundance' 3 DSS 0.3 ? mM 'natural abundance' 3 'sodium azide' 1.5 ? mM 'natural abundance' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 5 HE C ARG 8 ? ? HN2 C NH2 12 ? ? 0.98 2 6 HH22 C ARG 8 ? ? HN1 C NH2 12 ? ? 1.06 3 7 HZ1 C LYS 9 ? ? HN2 C NH2 12 ? ? 1.06 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.28 114.20 8.08 1.10 N 2 1 NE C ARG 2 ? ? CZ C ARG 2 ? ? NH1 C ARG 2 ? ? 123.71 120.30 3.41 0.50 N 3 1 NE C ARG 8 ? ? CZ C ARG 8 ? ? NH1 C ARG 8 ? ? 123.38 120.30 3.08 0.50 N 4 2 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.41 114.20 8.21 1.10 N 5 3 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.24 114.20 8.04 1.10 N 6 3 NE C ARG 2 ? ? CZ C ARG 2 ? ? NH1 C ARG 2 ? ? 123.80 120.30 3.50 0.50 N 7 4 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.31 114.20 8.11 1.10 N 8 4 NE C ARG 2 ? ? CZ C ARG 2 ? ? NH1 C ARG 2 ? ? 123.86 120.30 3.56 0.50 N 9 4 NE C ARG 8 ? ? CZ C ARG 8 ? ? NH1 C ARG 8 ? ? 123.45 120.30 3.15 0.50 N 10 5 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.11 114.20 7.91 1.10 N 11 6 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.27 114.20 8.07 1.10 N 12 6 NE C ARG 2 ? ? CZ C ARG 2 ? ? NH2 C ARG 2 ? ? 123.42 120.30 3.12 0.50 N 13 6 NE C ARG 8 ? ? CZ C ARG 8 ? ? NH1 C ARG 8 ? ? 123.96 120.30 3.66 0.50 N 14 7 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.05 114.20 7.85 1.10 N 15 7 NE C ARG 2 ? ? CZ C ARG 2 ? ? NH1 C ARG 2 ? ? 123.64 120.30 3.34 0.50 N 16 7 NE C ARG 8 ? ? CZ C ARG 8 ? ? NH1 C ARG 8 ? ? 123.93 120.30 3.63 0.50 N 17 8 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.38 114.20 8.18 1.10 N 18 8 NE C ARG 8 ? ? CZ C ARG 8 ? ? NH1 C ARG 8 ? ? 123.42 120.30 3.12 0.50 N 19 9 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.15 114.20 7.95 1.10 N 20 9 NE C ARG 2 ? ? CZ C ARG 2 ? ? NH1 C ARG 2 ? ? 123.53 120.30 3.23 0.50 N 21 10 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.17 114.20 7.97 1.10 N 22 11 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.29 114.20 8.09 1.10 N 23 11 NE C ARG 2 ? ? CZ C ARG 2 ? ? NH1 C ARG 2 ? ? 123.57 120.30 3.27 0.50 N 24 12 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.18 114.20 7.98 1.10 N 25 12 NE C ARG 8 ? ? CZ C ARG 8 ? ? NH1 C ARG 8 ? ? 124.08 120.30 3.78 0.50 N 26 13 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.04 114.20 7.84 1.10 N 27 13 NE C ARG 2 ? ? CZ C ARG 2 ? ? NH1 C ARG 2 ? ? 123.66 120.30 3.36 0.50 N 28 14 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.30 114.20 8.10 1.10 N 29 14 NE C ARG 2 ? ? CZ C ARG 2 ? ? NH1 C ARG 2 ? ? 123.62 120.30 3.32 0.50 N 30 14 NE C ARG 8 ? ? CZ C ARG 8 ? ? NH1 C ARG 8 ? ? 124.75 120.30 4.45 0.50 N 31 15 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.11 114.20 7.91 1.10 N 32 15 NE C ARG 8 ? ? CZ C ARG 8 ? ? NH1 C ARG 8 ? ? 123.43 120.30 3.13 0.50 N 33 16 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.00 114.20 7.80 1.10 N 34 17 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.48 114.20 8.28 1.10 N 35 17 NE C ARG 8 ? ? CZ C ARG 8 ? ? NH1 C ARG 8 ? ? 123.35 120.30 3.05 0.50 N 36 18 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.26 114.20 8.06 1.10 N 37 19 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.42 114.20 8.22 1.10 N 38 20 CA A CYS 11 ? ? CB A CYS 11 ? ? SG A CYS 11 ? ? 122.47 114.20 8.27 1.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 0 ? ? 53.03 13.96 2 1 CYS A 51 ? ? -94.45 -62.71 3 1 ALA C 7 ? ? -154.11 -37.36 4 2 ASP A 0 ? ? 51.53 11.91 5 2 CYS A 51 ? ? -91.24 -60.90 6 2 ARG C 8 ? ? 65.82 149.81 7 3 ASP A 0 ? ? 50.57 14.63 8 3 ARG A 1 ? ? 59.22 -3.05 9 3 CYS A 51 ? ? -93.85 -63.26 10 3 GLN C 5 ? ? 53.11 16.95 11 4 ASP A 0 ? ? 47.97 12.22 12 4 ARG A 1 ? ? 57.97 10.00 13 4 TYR A 49 ? ? -36.95 -39.01 14 4 CYS A 51 ? ? -96.67 -61.46 15 5 ASP A 0 ? ? 50.68 13.90 16 5 ARG A 1 ? ? 58.89 8.99 17 5 CYS A 51 ? ? -94.23 -63.02 18 5 MLY C 4 ? ? -133.34 -31.60 19 5 THR C 6 ? ? 51.35 18.98 20 5 ALA C 7 ? ? 54.34 19.96 21 5 LYS C 9 ? ? -77.94 -165.20 22 6 ASP A 0 ? ? 49.98 10.92 23 6 ARG A 1 ? ? 59.05 -1.17 24 6 TYR A 49 ? ? -37.53 -38.09 25 6 CYS A 51 ? ? -96.33 -62.07 26 6 ARG C 2 ? ? 56.90 -73.95 27 6 THR C 3 ? ? 56.02 155.00 28 6 MLY C 4 ? ? -141.96 -29.66 29 7 ASP A 0 ? ? 49.74 10.70 30 7 ARG A 1 ? ? 53.15 14.84 31 7 CYS A 51 ? ? -91.31 -60.23 32 7 ARG C 2 ? ? 44.67 -70.03 33 7 THR C 3 ? ? 57.77 149.85 34 8 ASP A 0 ? ? 55.16 16.80 35 8 CYS A 51 ? ? -95.43 -63.27 36 8 ARG C 2 ? ? 50.35 -69.89 37 8 THR C 3 ? ? 57.64 149.57 38 9 ASP A 0 ? ? 47.41 17.56 39 9 ARG A 1 ? ? 51.11 16.60 40 9 CYS A 51 ? ? -91.93 -61.10 41 9 THR C 6 ? ? -140.37 28.72 42 10 ASP A 0 ? ? 49.84 17.52 43 10 ARG A 1 ? ? 51.94 15.29 44 10 CYS A 51 ? ? -93.83 -63.43 45 10 ARG C 2 ? ? 47.67 -70.68 46 10 THR C 3 ? ? 57.53 150.78 47 10 SER C 10 ? ? 62.42 175.87 48 11 ASP A 0 ? ? 48.28 19.03 49 11 ARG A 1 ? ? 50.30 16.94 50 11 CYS A 51 ? ? -94.21 -62.88 51 12 ASP A 0 ? ? 49.81 17.22 52 12 ARG A 1 ? ? 52.04 15.00 53 12 CYS A 51 ? ? -94.45 -62.92 54 12 ARG C 2 ? ? 49.28 -71.76 55 12 THR C 3 ? ? 57.66 148.71 56 12 MLY C 4 ? ? -152.13 -16.65 57 12 GLN C 5 ? ? 61.95 -85.97 58 13 ASP A 0 ? ? 49.95 11.30 59 13 ARG A 1 ? ? 53.17 15.96 60 13 TYR A 49 ? ? -37.64 -38.19 61 13 CYS A 51 ? ? -97.53 -61.60 62 13 ARG C 2 ? ? 45.24 -70.55 63 13 THR C 3 ? ? 58.65 149.36 64 14 ASP A 0 ? ? 53.20 11.83 65 14 ARG A 1 ? ? 55.28 13.64 66 14 TYR A 49 ? ? -36.98 -38.91 67 14 CYS A 51 ? ? -97.22 -61.95 68 14 ARG C 8 ? ? 66.37 -46.91 69 15 ASP A 0 ? ? 50.78 11.02 70 15 ARG A 1 ? ? 56.23 9.74 71 15 CYS A 51 ? ? -94.93 -63.37 72 15 ARG C 2 ? ? 46.81 -70.22 73 15 THR C 3 ? ? 57.59 150.43 74 15 THR C 6 ? ? -79.63 43.82 75 15 ALA C 7 ? ? 57.46 -175.39 76 16 ASP A 0 ? ? 51.39 10.89 77 16 ARG A 1 ? ? 55.16 15.90 78 16 CYS A 51 ? ? -93.91 -62.89 79 16 ARG C 2 ? ? 43.73 -70.27 80 16 THR C 3 ? ? 58.54 151.15 81 17 ASP A 0 ? ? 50.54 14.37 82 17 ARG A 1 ? ? 58.75 9.28 83 17 CYS A 51 ? ? -94.51 -62.40 84 18 ASP A 0 ? ? 48.88 12.26 85 18 ARG A 1 ? ? 56.53 10.79 86 18 TYR A 49 ? ? -37.40 -38.44 87 18 CYS A 51 ? ? -96.74 -62.17 88 19 ASP A 0 ? ? 49.33 10.96 89 19 ARG A 1 ? ? 54.48 14.36 90 19 TYR A 49 ? ? -37.10 -38.47 91 19 CYS A 51 ? ? -96.80 -62.24 92 20 HIS A -2 ? ? 50.23 -91.37 93 20 ASP A 0 ? ? 51.28 13.42 94 20 ARG A 1 ? ? 56.44 11.07 95 20 CYS A 51 ? ? -91.26 -61.63 96 20 ALA C 7 ? ? 62.63 158.45 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Cancer Institute (NIH/NCI)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number CA132878 _pdbx_audit_support.ordinal 1 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN #