HEADER HYDROLASE 14-SEP-16 5TC9 TITLE WILD TYPE TRCEL7A CATALYTIC DOMAIN IN A CLOSED STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCANASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 19-449; COMPND 5 EC: 3.2.1.- SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HYPOCREA JECORINA (STRAIN QM6A); SOURCE 3 ORGANISM_TAXID: 431241; SOURCE 4 STRAIN: QM6A KEYWDS CEL7A, CBHI, CELLULASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.M.BODENHEIMER,F.MEILLEUR REVDAT 5 04-OCT-23 5TC9 1 HETSYN REVDAT 4 29-JUL-20 5TC9 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE REVDAT 3 27-NOV-19 5TC9 1 SEQRES REVDAT 2 20-SEP-17 5TC9 1 REMARK REVDAT 1 04-JAN-17 5TC9 0 JRNL AUTH A.M.BODENHEIMER,F.MEILLEUR JRNL TITL CRYSTAL STRUCTURES OF WILD-TYPE TRICHODERMA REESEI CEL7A JRNL TITL 2 CATALYTIC DOMAIN IN OPEN AND CLOSED STATES. JRNL REF FEBS LETT. V. 590 4429 2016 JRNL REFN ISSN 1873-3468 JRNL PMID 27943301 JRNL DOI 10.1002/1873-3468.12464 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 46502 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2504 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3268 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.17 REMARK 3 BIN R VALUE (WORKING SET) : 0.1880 REMARK 3 BIN FREE R VALUE SET COUNT : 182 REMARK 3 BIN FREE R VALUE : 0.2550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3188 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 47 REMARK 3 SOLVENT ATOMS : 458 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.02000 REMARK 3 B22 (A**2) : 1.40000 REMARK 3 B33 (A**2) : 0.40000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.51000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.093 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.091 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.060 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.778 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3403 ; 0.014 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2889 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4668 ; 1.688 ; 1.947 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6716 ; 1.018 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 460 ; 6.498 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 142 ;34.828 ;25.493 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 482 ;11.962 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;19.280 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 510 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4049 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 783 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1767 ; 0.599 ; 1.017 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1766 ; 0.597 ; 1.016 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2218 ; 1.005 ; 1.524 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2219 ; 1.005 ; 1.525 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1633 ; 0.924 ; 1.109 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1634 ; 0.924 ; 1.110 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2436 ; 1.441 ; 1.634 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4049 ; 3.386 ;13.508 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3914 ; 3.125 ;12.862 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 903 REMARK 3 ORIGIN FOR THE GROUP (A): 6.0773 -59.7963 74.1199 REMARK 3 T TENSOR REMARK 3 T11: 0.0708 T22: 0.0086 REMARK 3 T33: 0.0030 T12: 0.0089 REMARK 3 T13: -0.0051 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 0.6712 L22: 0.0717 REMARK 3 L33: 0.2358 L12: 0.0379 REMARK 3 L13: -0.1769 L23: 0.1042 REMARK 3 S TENSOR REMARK 3 S11: 0.0086 S12: 0.0340 S13: -0.0053 REMARK 3 S21: -0.0114 S22: -0.0046 S23: -0.0029 REMARK 3 S31: -0.0218 S32: -0.0154 S33: -0.0040 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5TC9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1000224008. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49009 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 74.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.6300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4P1H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, 100 MM HEPES, 5 MM GD(NO3)3, REMARK 280 PH 6.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 308K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 76.22500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.41500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 76.22500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 22.41500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 605 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 24 CG2 REMARK 470 THR A 29 CG2 REMARK 470 ALA A 100 CB REMARK 470 ASP A 114 CG OD1 OD2 REMARK 470 LYS A 157 CE NZ REMARK 470 GLU A 239 CD OE1 OE2 REMARK 470 ASP A 241 CB CG OD1 OD2 REMARK 470 ASP A 249 CG OD1 OD2 REMARK 470 GLU A 317 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 682 O HOH A 790 1.99 REMARK 500 O HOH A 682 O HOH A 1021 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 150 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 95 -82.96 -91.05 REMARK 500 SER A 99 -135.14 -119.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1057 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH A1058 DISTANCE = 6.48 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 GD3 A 504 GD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 295 OE1 REMARK 620 2 GLU A 295 OE2 50.1 REMARK 620 3 GLU A 295 OE1 0.0 50.1 REMARK 620 4 GLU A 295 OE2 50.1 0.0 50.1 REMARK 620 5 GLU A 325 OE2 70.6 78.9 70.6 78.9 REMARK 620 6 GLU A 325 OE2 70.6 78.9 70.6 78.9 0.0 REMARK 620 7 HOH A 615 O 113.5 78.2 113.5 78.2 59.6 59.6 REMARK 620 8 HOH A 615 O 70.9 85.3 70.9 85.3 139.8 139.8 151.1 REMARK 620 N 1 2 3 4 5 6 7 DBREF 5TC9 A 2 432 UNP G0RVK1 G0RVK1_HYPJQ 19 449 SEQADV 5TC9 PCA A 1 UNP G0RVK1 EXPRESSION TAG SEQRES 1 A 432 PCA SER ALA CYS THR LEU GLN SER GLU THR HIS PRO PRO SEQRES 2 A 432 LEU THR TRP GLN LYS CYS SER SER GLY GLY THR CYS THR SEQRES 3 A 432 GLN GLN THR GLY SER VAL VAL ILE ASP ALA ASN TRP ARG SEQRES 4 A 432 TRP THR HIS ALA THR ASN SER SER THR ASN CYS TYR ASP SEQRES 5 A 432 GLY ASN THR TRP SER SER THR LEU CYS PRO ASP ASN GLU SEQRES 6 A 432 THR CYS ALA LYS ASN CYS CYS LEU ASP GLY ALA ALA TYR SEQRES 7 A 432 ALA SER THR TYR GLY VAL THR THR SER GLY ASN SER LEU SEQRES 8 A 432 SER ILE GLY PHE VAL THR GLN SER ALA GLN LYS ASN VAL SEQRES 9 A 432 GLY ALA ARG LEU TYR LEU MET ALA SER ASP THR THR TYR SEQRES 10 A 432 GLN GLU PHE THR LEU LEU GLY ASN GLU PHE SER PHE ASP SEQRES 11 A 432 VAL ASP VAL SER GLN LEU PRO CYS GLY LEU ASN GLY ALA SEQRES 12 A 432 LEU TYR PHE VAL SER MET ASP ALA ASP GLY GLY VAL SER SEQRES 13 A 432 LYS TYR PRO THR ASN THR ALA GLY ALA LYS TYR GLY THR SEQRES 14 A 432 GLY TYR CYS ASP SER GLN CYS PRO ARG ASP LEU LYS PHE SEQRES 15 A 432 ILE ASN GLY GLN ALA ASN VAL GLU GLY TRP GLU PRO SER SEQRES 16 A 432 SER ASN ASN ALA ASN THR GLY ILE GLY GLY HIS GLY SER SEQRES 17 A 432 CYS CYS SER GLU MET ASP ILE TRP GLU ALA ASN SER ILE SEQRES 18 A 432 SER GLU ALA LEU THR PRO HIS PRO CYS THR THR VAL GLY SEQRES 19 A 432 GLN GLU ILE CYS GLU GLY ASP GLY CYS GLY GLY THR TYR SEQRES 20 A 432 SER ASP ASN ARG TYR GLY GLY THR CYS ASP PRO ASP GLY SEQRES 21 A 432 CYS ASP TRP ASN PRO TYR ARG LEU GLY ASN THR SER PHE SEQRES 22 A 432 TYR GLY PRO GLY SER SER PHE THR LEU ASP THR THR LYS SEQRES 23 A 432 LYS LEU THR VAL VAL THR GLN PHE GLU THR SER GLY ALA SEQRES 24 A 432 ILE ASN ARG TYR TYR VAL GLN ASN GLY VAL THR PHE GLN SEQRES 25 A 432 GLN PRO ASN ALA GLU LEU GLY SER TYR SER GLY ASN GLU SEQRES 26 A 432 LEU ASN ASP ASP TYR CYS THR ALA GLU GLU ALA GLU PHE SEQRES 27 A 432 GLY GLY SER SER PHE SER ASP LYS GLY GLY LEU THR GLN SEQRES 28 A 432 PHE LYS LYS ALA THR SER GLY GLY MET VAL LEU VAL MET SEQRES 29 A 432 SER LEU TRP ASP ASP TYR TYR ALA ASN MET LEU TRP LEU SEQRES 30 A 432 ASP SER THR TYR PRO THR ASN GLU THR SER SER THR PRO SEQRES 31 A 432 GLY ALA VAL ARG GLY SER CYS SER THR SER SER GLY VAL SEQRES 32 A 432 PRO ALA GLN VAL GLU SER GLN SER PRO ASN ALA LYS VAL SEQRES 33 A 432 THR PHE SER ASN ILE LYS PHE GLY PRO ILE GLY SER THR SEQRES 34 A 432 GLY ASN PRO HET PCA A 1 8 HET NAG A 501 14 HET NAG A 502 14 HET NAG A 503 14 HET GD3 A 504 1 HET NO3 A 505 4 HETNAM PCA PYROGLUTAMIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GD3 GADOLINIUM ION HETNAM NO3 NITRATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 1 PCA C5 H7 N O3 FORMUL 2 NAG 3(C8 H15 N O6) FORMUL 5 GD3 GD 3+ FORMUL 6 NO3 N O3 1- FORMUL 7 HOH *458(H2 O) HELIX 1 AA1 ALA A 36 ARG A 39 5 4 HELIX 2 AA2 ASP A 63 ASN A 70 1 8 HELIX 3 AA3 ALA A 77 GLY A 83 1 7 HELIX 4 AA4 GLY A 164 GLY A 168 5 5 HELIX 5 AA5 ASP A 241 GLY A 244 5 4 HELIX 6 AA6 ASN A 327 GLY A 339 1 13 HELIX 7 AA7 SER A 341 LYS A 346 1 6 HELIX 8 AA8 GLY A 347 SER A 357 1 11 HELIX 9 AA9 MET A 374 SER A 379 1 6 HELIX 10 AB1 VAL A 403 SER A 411 1 9 SHEET 1 AA1 3 SER A 2 ALA A 3 0 SHEET 2 AA1 3 CYS A 71 LEU A 73 1 O LEU A 73 N SER A 2 SHEET 3 AA1 3 THR A 41 ALA A 43 -1 N HIS A 42 O CYS A 72 SHEET 1 AA2 5 CYS A 25 ILE A 34 0 SHEET 2 AA2 5 PRO A 13 CYS A 19 -1 N TRP A 16 O GLN A 28 SHEET 3 AA2 5 LYS A 415 PRO A 425 1 O PHE A 423 N CYS A 19 SHEET 4 AA2 5 SER A 90 GLY A 94 -1 N LEU A 91 O PHE A 418 SHEET 5 AA2 5 VAL A 84 SER A 87 -1 N THR A 85 O SER A 92 SHEET 1 AA3 6 SER A 90 GLY A 94 0 SHEET 2 AA3 6 LYS A 415 PRO A 425 -1 O PHE A 418 N LEU A 91 SHEET 3 AA3 6 ASN A 125 ASP A 132 -1 N ASP A 130 O SER A 419 SHEET 4 AA3 6 LEU A 288 PHE A 294 -1 O VAL A 290 N PHE A 129 SHEET 5 AA3 6 ILE A 300 GLN A 306 -1 O TYR A 303 N VAL A 291 SHEET 6 AA3 6 VAL A 309 GLN A 312 -1 O PHE A 311 N TYR A 304 SHEET 1 AA4 5 LYS A 415 PRO A 425 0 SHEET 2 AA4 5 PRO A 13 CYS A 19 1 N CYS A 19 O PHE A 423 SHEET 3 AA4 5 CYS A 25 ILE A 34 -1 O GLN A 28 N TRP A 16 SHEET 4 AA4 5 ALA A 106 SER A 113 -1 O MET A 111 N SER A 31 SHEET 5 AA4 5 THR A 116 TYR A 117 -1 O THR A 116 N ALA A 112 SHEET 1 AA5 7 ALA A 106 SER A 113 0 SHEET 2 AA5 7 GLY A 359 ASP A 368 -1 O MET A 364 N LEU A 108 SHEET 3 AA5 7 GLU A 119 THR A 121 -1 N PHE A 120 O MET A 360 SHEET 4 AA5 7 GLY A 359 ASP A 368 -1 O MET A 360 N PHE A 120 SHEET 5 AA5 7 LEU A 140 VAL A 147 -1 N TYR A 145 O VAL A 363 SHEET 6 AA5 7 GLU A 212 ALA A 218 -1 O MET A 213 N PHE A 146 SHEET 7 AA5 7 GLU A 223 HIS A 228 -1 O THR A 226 N ASP A 214 SHEET 1 AA6 2 TYR A 51 ASP A 52 0 SHEET 2 AA6 2 THR A 55 TRP A 56 -1 O THR A 55 N ASP A 52 SHEET 1 AA7 2 VAL A 96 GLN A 98 0 SHEET 2 AA7 2 LYS A 102 VAL A 104 -1 O ASN A 103 N THR A 97 SHEET 1 AA8 2 PHE A 182 ILE A 183 0 SHEET 2 AA8 2 GLN A 186 ALA A 187 -1 O GLN A 186 N ILE A 183 SHEET 1 AA9 2 GLU A 193 PRO A 194 0 SHEET 2 AA9 2 GLY A 202 ILE A 203 -1 O ILE A 203 N GLU A 193 SHEET 1 AB1 2 HIS A 206 CYS A 209 0 SHEET 2 AB1 2 GLU A 236 GLU A 239 -1 O GLU A 236 N CYS A 209 SHEET 1 AB2 2 TYR A 274 GLY A 275 0 SHEET 2 AB2 2 LEU A 282 ASP A 283 1 O LEU A 282 N GLY A 275 SHEET 1 AB3 2 ALA A 316 LEU A 318 0 SHEET 2 AB3 2 TYR A 321 GLY A 323 -1 O GLY A 323 N ALA A 316 SSBOND 1 CYS A 4 CYS A 72 1555 1555 2.04 SSBOND 2 CYS A 19 CYS A 25 1555 1555 2.12 SSBOND 3 CYS A 50 CYS A 71 1555 1555 2.02 SSBOND 4 CYS A 61 CYS A 67 1555 1555 2.07 SSBOND 5 CYS A 138 CYS A 397 1555 1555 2.03 SSBOND 6 CYS A 172 CYS A 210 1555 1555 2.10 SSBOND 7 CYS A 176 CYS A 209 1555 1555 2.05 SSBOND 8 CYS A 230 CYS A 256 1555 1555 2.06 SSBOND 9 CYS A 238 CYS A 243 1555 1555 2.03 SSBOND 10 CYS A 261 CYS A 331 1555 1555 2.05 LINK C PCA A 1 N SER A 2 1555 1555 1.32 LINK ND2 ASN A 45 C1 NAG A 502 1555 1555 1.45 LINK ND2 ASN A 270 C1 NAG A 503 1555 1555 1.45 LINK ND2 ASN A 384 C1 NAG A 501 1555 1555 1.44 LINK OE1 GLU A 295 GD GD3 A 504 1555 1555 2.57 LINK OE2 GLU A 295 GD GD3 A 504 1555 1555 2.59 LINK OE1 GLU A 295 GD GD3 A 504 1555 2558 2.49 LINK OE2 GLU A 295 GD GD3 A 504 1555 2558 2.31 LINK OE2 GLU A 325 GD GD3 A 504 1555 1555 2.49 LINK OE2 GLU A 325 GD GD3 A 504 1555 2558 2.15 LINK GD GD3 A 504 O HOH A 615 1555 1555 2.67 LINK GD GD3 A 504 O HOH A 615 1555 2558 2.31 CISPEP 1 TYR A 381 PRO A 382 0 -4.77 CRYST1 152.450 44.830 57.520 90.00 101.11 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006560 0.000000 0.001288 0.00000 SCALE2 0.000000 0.022306 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017717 0.00000 HETATM 1 N PCA A 1 13.583 -59.275 52.375 1.00 17.96 N ANISOU 1 N PCA A 1 2486 2712 1625 8 12 -12 N HETATM 2 CA PCA A 1 14.488 -60.396 52.217 1.00 17.68 C ANISOU 2 CA PCA A 1 2433 2679 1602 -12 16 -71 C HETATM 3 CB PCA A 1 14.932 -60.665 53.641 1.00 17.71 C ANISOU 3 CB PCA A 1 2465 2601 1662 -10 15 -81 C HETATM 4 CG PCA A 1 13.782 -60.145 54.499 1.00 17.21 C ANISOU 4 CG PCA A 1 2423 2504 1611 9 7 -48 C HETATM 5 CD PCA A 1 13.096 -59.158 53.593 1.00 17.46 C ANISOU 5 CD PCA A 1 2448 2587 1599 20 6 -2 C HETATM 6 OE PCA A 1 12.164 -58.436 53.928 1.00 17.14 O ANISOU 6 OE PCA A 1 2421 2535 1557 38 2 35 O HETATM 7 C PCA A 1 13.824 -61.626 51.667 1.00 17.73 C ANISOU 7 C PCA A 1 2404 2732 1598 -19 12 -126 C HETATM 8 O PCA A 1 12.591 -61.800 51.793 1.00 17.27 O ANISOU 8 O PCA A 1 2341 2685 1536 -8 4 -126 O