HEADER OXIDOREDUCTASE 15-SEP-16 5TCV TITLE ACC OXIDASE COMPLEX WITH SUBSTRATE 1-AMINOCYCLOPROPANE-1-CARBOXYLIC TITLE 2 ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ACCO,ETHYLENE-FORMING ENZYME,EFE; COMPND 5 EC: 1.14.17.4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PETUNIA HYBRIDA; SOURCE 3 ORGANISM_COMMON: PETUNIA; SOURCE 4 ORGANISM_TAXID: 4102; SOURCE 5 GENE: ACO1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS SUBSTRATE COMPLEX, OXYGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR D.M.GUNAWARDANA,Y.YOSAATMADJA,I.K.LEUNG,C.J.SQUIRE REVDAT 2 04-OCT-23 5TCV 1 LINK REVDAT 1 20-SEP-17 5TCV 0 JRNL AUTH D.M.GUNAWARDANA,J.ARABSHAHI,Y.YOSAATMADJA,J.REYNISSON, JRNL AUTH 2 C.J.SQUIRE,I.K.LEUNG JRNL TITL ACC OXIDASE COMPLEX WITH SUBSTRATE JRNL TITL 2 1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0131 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 12427 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 676 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 909 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3870 REMARK 3 BIN FREE R VALUE SET COUNT : 43 REMARK 3 BIN FREE R VALUE : 0.3600 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2359 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 11 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 76.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.55000 REMARK 3 B22 (A**2) : 2.12000 REMARK 3 B33 (A**2) : 3.43000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.566 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.338 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.320 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.651 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2450 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2350 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3302 ; 1.032 ; 1.979 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5438 ; 0.851 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 303 ; 5.712 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 110 ;39.882 ;24.909 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 442 ;14.152 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;13.416 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 356 ; 0.057 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2732 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 530 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1201 ; 1.948 ; 7.599 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1202 ; 1.947 ; 7.601 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1500 ; 3.378 ;11.394 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1500 ; 3.378 ;11.394 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1249 ; 1.738 ; 7.786 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1250 ; 1.737 ; 7.785 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1797 ; 3.066 ;11.586 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2613 ; 5.007 ;58.667 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2614 ; 5.007 ;58.671 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5TCV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1000224047. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 10.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13101 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 39.960 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 43.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 44.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1WA6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM DIHYDROGENPHOSPHATE, LITHIUM REMARK 280 SULFATE, POTTASIUM HYDROGEN PHOSPHATE, CAPS PH 10.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 35.68050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 53.57000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 54.00950 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 35.68050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 53.57000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 54.00950 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 35.68050 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 53.57000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 54.00950 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 35.68050 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 53.57000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 54.00950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 51370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -109.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 324.05700 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 324.05700 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 GLU A 269 REMARK 465 ALA A 270 REMARK 465 GLU A 271 REMARK 465 GLU A 272 REMARK 465 ASN A 273 REMARK 465 LYS A 274 REMARK 465 THR A 309 REMARK 465 ASP A 310 REMARK 465 VAL A 311 REMARK 465 LYS A 312 REMARK 465 MET A 313 REMARK 465 ASP A 314 REMARK 465 PRO A 315 REMARK 465 ILE A 316 REMARK 465 ALA A 317 REMARK 465 THR A 318 REMARK 465 VAL A 319 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 43 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 51 CG CD CE NZ REMARK 470 ASP A 169 CG OD1 OD2 REMARK 470 ILE A 171 CG1 CG2 CD1 REMARK 470 LYS A 268 CG CD CE NZ REMARK 470 GLN A 295 CG CD OE1 NE2 REMARK 470 GLU A 308 CA C O CB CG CD OE1 REMARK 470 GLU A 308 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 16 32.03 -89.16 REMARK 500 ASP A 190 -163.79 63.99 REMARK 500 LEU A 265 42.15 -93.26 REMARK 500 PHE A 294 50.45 -117.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 401 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 177 NE2 REMARK 620 2 ASP A 179 OD1 86.3 REMARK 620 3 HIS A 234 NE2 89.4 88.0 REMARK 620 4 1AC A 402 O 103.0 167.9 99.7 REMARK 620 5 1AC A 402 N 173.6 91.3 84.6 80.2 REMARK 620 6 HOH A 601 O 95.0 73.9 161.0 97.3 90.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1AC A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5TCW RELATED DB: PDB DBREF 5TCV A 1 319 UNP Q08506 ACCO1_PETHY 1 319 SEQRES 1 A 319 MET GLU ASN PHE PRO ILE ILE SER LEU ASP LYS VAL ASN SEQRES 2 A 319 GLY VAL GLU ARG ALA ALA THR MET GLU MET ILE LYS ASP SEQRES 3 A 319 ALA CYS GLU ASN TRP GLY PHE PHE GLU LEU VAL ASN HIS SEQRES 4 A 319 GLY ILE PRO ARG GLU VAL MET ASP THR VAL GLU LYS MET SEQRES 5 A 319 THR LYS GLY HIS TYR LYS LYS CYS MET GLU GLN ARG PHE SEQRES 6 A 319 LYS GLU LEU VAL ALA SER LYS ALA LEU GLU GLY VAL GLN SEQRES 7 A 319 ALA GLU VAL THR ASP MET ASP TRP GLU SER THR PHE PHE SEQRES 8 A 319 LEU LYS HIS LEU PRO ILE SER ASN ILE SER GLU VAL PRO SEQRES 9 A 319 ASP LEU ASP GLU GLU TYR ARG GLU VAL MET ARG ASP PHE SEQRES 10 A 319 ALA LYS ARG LEU GLU LYS LEU ALA GLU GLU LEU LEU ASP SEQRES 11 A 319 LEU LEU CYS GLU ASN LEU GLY LEU GLU LYS GLY TYR LEU SEQRES 12 A 319 LYS ASN ALA PHE TYR GLY SER LYS GLY PRO ASN PHE GLY SEQRES 13 A 319 THR LYS VAL SER ASN TYR PRO PRO CYS PRO LYS PRO ASP SEQRES 14 A 319 LEU ILE LYS GLY LEU ARG ALA HIS THR ASP ALA GLY GLY SEQRES 15 A 319 ILE ILE LEU LEU PHE GLN ASP ASP LYS VAL SER GLY LEU SEQRES 16 A 319 GLN LEU LEU LYS ASP GLY GLN TRP ILE ASP VAL PRO PRO SEQRES 17 A 319 MET ARG HIS SER ILE VAL VAL ASN LEU GLY ASP GLN LEU SEQRES 18 A 319 GLU VAL ILE THR ASN GLY LYS TYR LYS SER VAL MET HIS SEQRES 19 A 319 ARG VAL ILE ALA GLN LYS ASP GLY ALA ARG MET SER LEU SEQRES 20 A 319 ALA SER PHE TYR ASN PRO GLY SER ASP ALA VAL ILE TYR SEQRES 21 A 319 PRO ALA PRO ALA LEU VAL GLU LYS GLU ALA GLU GLU ASN SEQRES 22 A 319 LYS GLN VAL TYR PRO LYS PHE VAL PHE ASP ASP TYR MET SEQRES 23 A 319 LYS LEU TYR ALA GLY LEU LYS PHE GLN ALA LYS GLU PRO SEQRES 24 A 319 ARG PHE GLU ALA MET LYS ALA MET GLU THR ASP VAL LYS SEQRES 25 A 319 MET ASP PRO ILE ALA THR VAL HET NI A 401 1 HET 1AC A 402 7 HETNAM NI NICKEL (II) ION HETNAM 1AC 1-AMINOCYCLOPROPANECARBOXYLIC ACID FORMUL 2 NI NI 2+ FORMUL 3 1AC C4 H7 N O2 FORMUL 4 HOH *11(H2 O) HELIX 1 AA1 ASP A 10 ASN A 13 5 4 HELIX 2 AA2 GLU A 16 TRP A 31 1 16 HELIX 3 AA3 PRO A 42 GLU A 75 1 34 HELIX 4 AA4 GLU A 80 MET A 84 5 5 HELIX 5 AA5 ASP A 107 GLY A 137 1 31 HELIX 6 AA6 GLY A 141 GLY A 149 1 9 HELIX 7 AA7 LYS A 167 LYS A 172 1 6 HELIX 8 AA8 GLY A 218 THR A 225 1 8 HELIX 9 AA9 ALA A 262 VAL A 266 5 5 HELIX 10 AB1 PHE A 282 ALA A 290 1 9 HELIX 11 AB2 ALA A 296 MET A 307 1 12 SHEET 1 AA1 7 ILE A 6 SER A 8 0 SHEET 2 AA1 7 PHE A 33 VAL A 37 1 O GLU A 35 N ILE A 7 SHEET 3 AA1 7 ILE A 213 LEU A 217 -1 O VAL A 215 N PHE A 34 SHEET 4 AA1 7 ILE A 183 GLN A 188 -1 N LEU A 186 O VAL A 214 SHEET 5 AA1 7 MET A 245 ASN A 252 -1 O SER A 249 N LEU A 185 SHEET 6 AA1 7 ASN A 154 ASN A 161 -1 N ASN A 154 O ASN A 252 SHEET 7 AA1 7 SER A 88 LEU A 95 -1 N PHE A 90 O VAL A 159 SHEET 1 AA2 3 GLN A 202 ASP A 205 0 SHEET 2 AA2 3 LEU A 195 LYS A 199 -1 N LEU A 197 O ILE A 204 SHEET 3 AA2 3 HIS A 234 VAL A 236 -1 O ARG A 235 N GLN A 196 SHEET 1 AA3 2 VAL A 258 ILE A 259 0 SHEET 2 AA3 2 PHE A 280 VAL A 281 -1 O PHE A 280 N ILE A 259 LINK NE2 HIS A 177 NI NI A 401 1555 1555 2.15 LINK OD1 ASP A 179 NI NI A 401 1555 1555 2.10 LINK NE2 HIS A 234 NI NI A 401 1555 1555 2.16 LINK NI NI A 401 O 1AC A 402 1555 1555 1.90 LINK NI NI A 401 N 1AC A 402 1555 1555 2.41 LINK NI NI A 401 O HOH A 601 1555 1555 2.00 CISPEP 1 LEU A 95 PRO A 96 0 -2.96 SITE 1 AC1 5 HIS A 177 ASP A 179 HIS A 234 1AC A 402 SITE 2 AC1 5 HOH A 601 SITE 1 AC2 7 GLU A 80 HIS A 177 ASP A 179 ASN A 216 SITE 2 AC2 7 HIS A 234 NI A 401 HOH A 601 CRYST1 71.361 107.140 108.019 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014013 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009334 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009258 0.00000