data_5TCZ # _entry.id 5TCZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5TCZ WWPDB D_1000223926 BMRB 30181 # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'NMR solution structure of engineered Protoxin-II analog' _pdbx_database_related.db_id 30181 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5TCZ _pdbx_database_status.recvd_initial_deposition_date 2016-09-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gibbs, A.C.' 1 'Wickenden, A.D.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2045-2322 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 7 _citation.language ? _citation.page_first 39662 _citation.page_last 39662 _citation.title 'Insensitivity to pain induced by a potent selective closed-state Nav1.7 inhibitor.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/srep39662 _citation.pdbx_database_id_PubMed 28045073 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Flinspach, M.' 1 primary 'Xu, Q.' 2 primary 'Piekarz, A.D.' 3 primary 'Fellows, R.' 4 primary 'Hagan, R.' 5 primary 'Gibbs, A.' 6 primary 'Liu, Y.' 7 primary 'Neff, R.A.' 8 primary 'Freedman, J.' 9 primary 'Eckert, W.A.' 10 primary 'Zhou, M.' 11 primary 'Bonesteel, R.' 12 primary 'Pennington, M.W.' 13 primary 'Eddinger, K.A.' 14 primary 'Yaksh, T.L.' 15 primary 'Hunter, M.' 16 primary 'Swanson, R.V.' 17 primary 'Wickenden, A.D.' 18 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description Beta/omega-theraphotoxin-Tp2a _entity.formula_weight 3862.721 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GPYCQKWMQTCDSERKCCEGMVCRLWCKKKLL _entity_poly.pdbx_seq_one_letter_code_can GPYCQKWMQTCDSERKCCEGMVCRLWCKKKLL _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 TYR n 1 4 CYS n 1 5 GLN n 1 6 LYS n 1 7 TRP n 1 8 MET n 1 9 GLN n 1 10 THR n 1 11 CYS n 1 12 ASP n 1 13 SER n 1 14 GLU n 1 15 ARG n 1 16 LYS n 1 17 CYS n 1 18 CYS n 1 19 GLU n 1 20 GLY n 1 21 MET n 1 22 VAL n 1 23 CYS n 1 24 ARG n 1 25 LEU n 1 26 TRP n 1 27 CYS n 1 28 LYS n 1 29 LYS n 1 30 LYS n 1 31 LEU n 1 32 LEU n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 32 _pdbx_entity_src_syn.organism_scientific 'Thrixopelma pruriens' _pdbx_entity_src_syn.organism_common_name 'Peruvian green velvet tarantula' _pdbx_entity_src_syn.ncbi_taxonomy_id 213387 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5TCZ _struct_ref.pdbx_db_accession 5TCZ _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5TCZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 32 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5TCZ _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 32 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 32 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H TOCSY' 1 isotropic 2 1 1 '2D 1H-1H NOESY' 1 isotropic 3 1 1 '2D 1H-15N HSQC' 1 isotropic 4 1 1 '2D 1H-13C HSQC' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 305.56 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.7 _pdbx_nmr_exptl_sample_conditions.ionic_strength 20 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.51 mM JNJ63955918, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label 1H_sample _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model Avance _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 950 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 5TCZ _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 5TCZ _pdbx_nmr_ensemble.conformers_calculated_total_number 500 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5TCZ _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement MOE 2015.10 'Chemical Computing Group' 2 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 3 'chemical shift assignment' NMRView ? 'Johnson, One Moon Scientific' 4 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5TCZ _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5TCZ _struct.title 'NMR solution structure of engineered Protoxin-II analog' _struct.pdbx_descriptor 'Beta/omega-theraphotoxin-Tp2a analog' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5TCZ _struct_keywords.text 'venom peptide analog, inhibitor, cystine knot, TOXIN' _struct_keywords.pdbx_keywords TOXIN # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id CYS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 4 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id MET _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 8 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id CYS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 4 _struct_conf.end_auth_comp_id MET _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 8 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 4 SG ? ? ? 1_555 A CYS 18 SG ? ? A CYS 4 A CYS 18 1_555 ? ? ? ? ? ? ? 2.035 ? disulf2 disulf ? ? A CYS 11 SG ? ? ? 1_555 A CYS 23 SG ? ? A CYS 11 A CYS 23 1_555 ? ? ? ? ? ? ? 2.029 ? disulf3 disulf ? ? A CYS 17 SG ? ? ? 1_555 A CYS 27 SG ? ? A CYS 17 A CYS 27 1_555 ? ? ? ? ? ? ? 2.042 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 5TCZ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 TYR 3 3 3 TYR TYR A . n A 1 4 CYS 4 4 4 CYS CYS A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 TRP 7 7 7 TRP TRP A . n A 1 8 MET 8 8 8 MET MET A . n A 1 9 GLN 9 9 9 GLN GLN A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 CYS 11 11 11 CYS CYS A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 CYS 17 17 17 CYS CYS A . n A 1 18 CYS 18 18 18 CYS CYS A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 MET 21 21 21 MET MET A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 CYS 23 23 23 CYS CYS A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 TRP 26 26 26 TRP TRP A . n A 1 27 CYS 27 27 27 CYS CYS A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 LEU 32 32 32 LEU LEU A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 3120 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2017-01-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component JNJ63955918 _pdbx_nmr_exptl_sample.concentration 1.51 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling 'natural abundance' # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 6 _pdbx_validate_close_contact.auth_atom_id_1 SG _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 CYS _pdbx_validate_close_contact.auth_seq_id_1 11 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 SG _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 CYS _pdbx_validate_close_contact.auth_seq_id_2 17 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.061 1.229 -0.168 0.019 N 2 2 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.059 1.229 -0.170 0.019 N 3 3 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.060 1.229 -0.169 0.019 N 4 4 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.060 1.229 -0.169 0.019 N 5 5 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.060 1.229 -0.169 0.019 N 6 6 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.061 1.229 -0.168 0.019 N 7 7 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.061 1.229 -0.168 0.019 N 8 8 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.061 1.229 -0.168 0.019 N 9 9 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.061 1.229 -0.168 0.019 N 10 10 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.059 1.229 -0.170 0.019 N 11 11 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.060 1.229 -0.169 0.019 N 12 12 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.061 1.229 -0.168 0.019 N 13 13 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.060 1.229 -0.169 0.019 N 14 14 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.062 1.229 -0.167 0.019 N 15 15 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.062 1.229 -0.167 0.019 N 16 16 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.060 1.229 -0.169 0.019 N 17 17 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.060 1.229 -0.169 0.019 N 18 18 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.061 1.229 -0.168 0.019 N 19 19 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.060 1.229 -0.169 0.019 N 20 20 C A LEU 32 ? ? OXT A LEU 32 ? ? 1.061 1.229 -0.168 0.019 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 24 ? ? CZ A ARG 24 ? ? NH1 A ARG 24 ? ? 124.76 120.30 4.46 0.50 N 2 2 NE A ARG 15 ? ? CZ A ARG 15 ? ? NH2 A ARG 15 ? ? 123.70 120.30 3.40 0.50 N 3 2 NE A ARG 24 ? ? CZ A ARG 24 ? ? NH1 A ARG 24 ? ? 123.74 120.30 3.44 0.50 N 4 3 CA A CYS 4 ? ? CB A CYS 4 ? ? SG A CYS 4 ? ? 121.93 114.20 7.73 1.10 N 5 3 NE A ARG 15 ? ? CZ A ARG 15 ? ? NH1 A ARG 15 ? ? 124.00 120.30 3.70 0.50 N 6 5 CA A CYS 4 ? ? CB A CYS 4 ? ? SG A CYS 4 ? ? 121.43 114.20 7.23 1.10 N 7 5 NE A ARG 15 ? ? CZ A ARG 15 ? ? NH1 A ARG 15 ? ? 124.23 120.30 3.93 0.50 N 8 6 NE A ARG 15 ? ? CZ A ARG 15 ? ? NH1 A ARG 15 ? ? 123.83 120.30 3.53 0.50 N 9 6 CA A CYS 23 ? ? CB A CYS 23 ? ? SG A CYS 23 ? ? 102.90 114.00 -11.10 1.80 N 10 6 NE A ARG 24 ? ? CZ A ARG 24 ? ? NH1 A ARG 24 ? ? 124.91 120.30 4.61 0.50 N 11 7 NE A ARG 15 ? ? CZ A ARG 15 ? ? NH1 A ARG 15 ? ? 124.32 120.30 4.02 0.50 N 12 7 NE A ARG 24 ? ? CZ A ARG 24 ? ? NH1 A ARG 24 ? ? 125.82 120.30 5.52 0.50 N 13 7 NE A ARG 24 ? ? CZ A ARG 24 ? ? NH2 A ARG 24 ? ? 117.23 120.30 -3.07 0.50 N 14 8 CA A CYS 4 ? ? CB A CYS 4 ? ? SG A CYS 4 ? ? 121.27 114.20 7.07 1.10 N 15 8 NE A ARG 15 ? ? CZ A ARG 15 ? ? NH1 A ARG 15 ? ? 126.60 120.30 6.30 0.50 N 16 8 NE A ARG 15 ? ? CZ A ARG 15 ? ? NH2 A ARG 15 ? ? 117.18 120.30 -3.12 0.50 N 17 9 NE A ARG 24 ? ? CZ A ARG 24 ? ? NH1 A ARG 24 ? ? 123.90 120.30 3.60 0.50 N 18 10 NE A ARG 15 ? ? CZ A ARG 15 ? ? NH1 A ARG 15 ? ? 124.83 120.30 4.53 0.50 N 19 10 NE A ARG 24 ? ? CZ A ARG 24 ? ? NH1 A ARG 24 ? ? 124.03 120.30 3.73 0.50 N 20 11 NE A ARG 15 ? ? CZ A ARG 15 ? ? NH1 A ARG 15 ? ? 123.72 120.30 3.42 0.50 N 21 11 NE A ARG 24 ? ? CZ A ARG 24 ? ? NH1 A ARG 24 ? ? 123.98 120.30 3.68 0.50 N 22 12 NE A ARG 15 ? ? CZ A ARG 15 ? ? NH1 A ARG 15 ? ? 123.38 120.30 3.08 0.50 N 23 13 NE A ARG 15 ? ? CZ A ARG 15 ? ? NH1 A ARG 15 ? ? 123.70 120.30 3.40 0.50 N 24 14 NE A ARG 15 ? ? CZ A ARG 15 ? ? NH1 A ARG 15 ? ? 124.41 120.30 4.11 0.50 N 25 15 NE A ARG 15 ? ? CZ A ARG 15 ? ? NH1 A ARG 15 ? ? 123.37 120.30 3.07 0.50 N 26 16 CB A TYR 3 ? ? CG A TYR 3 ? ? CD2 A TYR 3 ? ? 117.04 121.00 -3.96 0.60 N 27 16 CA A CYS 4 ? ? CB A CYS 4 ? ? SG A CYS 4 ? ? 121.17 114.20 6.97 1.10 N 28 16 NE A ARG 15 ? ? CZ A ARG 15 ? ? NH1 A ARG 15 ? ? 124.87 120.30 4.57 0.50 N 29 16 CA A CYS 18 ? ? CB A CYS 18 ? ? SG A CYS 18 ? ? 120.97 114.20 6.77 1.10 N 30 16 NE A ARG 24 ? ? CZ A ARG 24 ? ? NH1 A ARG 24 ? ? 124.11 120.30 3.81 0.50 N 31 17 NE A ARG 24 ? ? CZ A ARG 24 ? ? NH1 A ARG 24 ? ? 124.10 120.30 3.80 0.50 N 32 18 CA A CYS 4 ? ? CB A CYS 4 ? ? SG A CYS 4 ? ? 120.87 114.20 6.67 1.10 N 33 18 NE A ARG 15 ? ? CZ A ARG 15 ? ? NH1 A ARG 15 ? ? 124.14 120.30 3.84 0.50 N 34 18 NE A ARG 24 ? ? CZ A ARG 24 ? ? NH1 A ARG 24 ? ? 123.86 120.30 3.56 0.50 N 35 19 NE A ARG 15 ? ? CZ A ARG 15 ? ? NH1 A ARG 15 ? ? 124.75 120.30 4.45 0.50 N 36 20 NE A ARG 24 ? ? CZ A ARG 24 ? ? NH1 A ARG 24 ? ? 123.98 120.30 3.68 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 4 ? ? -154.17 -71.79 2 1 LYS A 6 ? ? -78.87 36.21 3 1 TRP A 7 ? ? -144.62 10.51 4 1 GLN A 9 ? ? -59.46 45.68 5 1 SER A 13 ? ? -69.92 13.00 6 1 VAL A 22 ? ? 49.65 70.69 7 1 LEU A 25 ? ? 57.81 -19.32 8 1 TRP A 26 ? ? -159.82 -159.81 9 2 CYS A 4 ? ? -153.78 -22.01 10 2 CYS A 11 ? ? -69.75 81.60 11 2 LYS A 16 ? ? -64.23 93.01 12 2 LEU A 25 ? ? 59.71 -14.11 13 2 LYS A 30 ? ? -158.31 69.99 14 3 CYS A 4 ? ? -124.30 -64.06 15 3 GLN A 9 ? ? -58.63 33.85 16 3 LYS A 16 ? ? -40.43 100.87 17 3 LEU A 25 ? ? 66.60 -32.66 18 3 CYS A 27 ? ? -153.23 80.00 19 3 LYS A 28 ? ? -80.17 -84.62 20 3 LYS A 30 ? ? -163.85 44.47 21 4 TYR A 3 ? ? -111.58 73.28 22 4 CYS A 4 ? ? -130.13 -58.87 23 4 TRP A 7 ? ? -155.37 35.57 24 4 GLN A 9 ? ? -60.04 8.22 25 4 THR A 10 ? ? 56.36 74.22 26 4 CYS A 23 ? ? -69.18 84.78 27 4 LEU A 25 ? ? 62.72 -18.45 28 4 LYS A 28 ? ? -120.16 -97.14 29 4 LYS A 30 ? ? -155.26 32.45 30 5 PRO A 2 ? ? -104.05 -123.79 31 5 CYS A 4 ? ? -128.77 -54.39 32 5 TRP A 7 ? ? -152.05 52.42 33 5 GLN A 9 ? ? -70.72 24.96 34 5 MET A 21 ? ? -80.64 -157.27 35 5 CYS A 23 ? ? -66.05 91.37 36 5 LEU A 25 ? ? 59.97 -67.89 37 5 LYS A 30 ? ? -154.47 82.78 38 6 PRO A 2 ? ? -75.58 -164.13 39 6 TYR A 3 ? ? 64.21 63.19 40 6 CYS A 4 ? ? -128.16 -72.11 41 6 MET A 8 ? ? 67.14 -15.33 42 6 GLN A 9 ? ? 57.17 -6.69 43 6 CYS A 18 ? ? 60.23 -78.07 44 6 LEU A 25 ? ? 61.07 -38.57 45 6 TRP A 26 ? ? -115.68 -161.20 46 6 LEU A 31 ? ? -148.37 30.36 47 7 TYR A 3 ? ? -112.06 -149.34 48 7 CYS A 4 ? ? -146.98 -51.87 49 7 GLN A 9 ? ? -65.72 38.03 50 7 ASP A 12 ? ? -107.13 -169.86 51 7 CYS A 18 ? ? 11.58 -69.12 52 7 LEU A 25 ? ? 61.77 -27.52 53 7 CYS A 27 ? ? -107.48 43.86 54 7 LYS A 30 ? ? -152.82 31.98 55 8 GLN A 9 ? ? -58.62 5.50 56 8 THR A 10 ? ? 56.91 71.52 57 8 MET A 21 ? ? -115.09 -162.54 58 8 LEU A 25 ? ? 58.64 -17.90 59 8 LYS A 30 ? ? -154.63 43.25 60 9 CYS A 4 ? ? -133.59 -73.08 61 9 GLN A 9 ? ? -56.86 25.17 62 9 SER A 13 ? ? -69.01 34.39 63 9 GLU A 14 ? ? -140.48 42.74 64 9 LYS A 16 ? ? -63.68 66.60 65 9 MET A 21 ? ? -58.61 -163.33 66 9 LEU A 25 ? ? 60.18 -32.46 67 9 LYS A 30 ? ? -162.94 96.06 68 9 LEU A 31 ? ? -155.23 -31.38 69 10 MET A 8 ? ? 56.89 74.60 70 10 THR A 10 ? ? 59.27 92.39 71 10 LEU A 25 ? ? 65.61 -46.04 72 10 LYS A 28 ? ? -143.44 -100.86 73 10 LYS A 29 ? ? -171.39 146.15 74 10 LYS A 30 ? ? -158.16 40.75 75 11 GLN A 9 ? ? -57.13 35.66 76 11 CYS A 18 ? ? -70.03 28.36 77 11 LEU A 25 ? ? 54.89 -20.68 78 11 LYS A 28 ? ? -130.91 -115.94 79 11 LYS A 30 ? ? -156.63 -6.98 80 12 CYS A 4 ? ? -161.82 -61.84 81 12 TRP A 7 ? ? -149.87 52.20 82 12 MET A 8 ? ? 39.32 51.27 83 12 GLN A 9 ? ? -58.38 -4.62 84 12 THR A 10 ? ? 66.04 145.72 85 12 MET A 21 ? ? -76.74 -169.30 86 12 LEU A 25 ? ? 62.18 -32.14 87 12 LYS A 28 ? ? -122.06 -119.26 88 12 LEU A 31 ? ? -72.96 45.14 89 13 CYS A 4 ? ? -154.12 -58.33 90 13 TRP A 7 ? ? -153.59 24.51 91 13 GLN A 9 ? ? -65.30 33.60 92 13 LYS A 16 ? ? -58.45 99.35 93 13 LEU A 25 ? ? 58.84 -33.42 94 14 TYR A 3 ? ? -77.39 46.52 95 14 MET A 8 ? ? 60.28 70.00 96 14 GLN A 9 ? ? -60.45 29.81 97 14 ASP A 12 ? ? -170.63 -179.63 98 14 GLU A 19 ? ? -147.67 27.67 99 14 LEU A 25 ? ? 62.25 -32.58 100 15 CYS A 4 ? ? -132.90 -66.22 101 15 GLN A 9 ? ? -67.15 17.68 102 15 CYS A 23 ? ? -64.22 80.29 103 15 LEU A 25 ? ? 60.88 -21.50 104 15 LYS A 28 ? ? -140.06 -109.11 105 15 LYS A 30 ? ? -159.25 -27.36 106 16 GLN A 9 ? ? -58.36 46.76 107 16 LYS A 16 ? ? -63.70 84.22 108 16 LEU A 25 ? ? 61.43 -25.73 109 16 LYS A 30 ? ? -147.23 10.43 110 17 GLN A 9 ? ? -64.65 11.86 111 17 THR A 10 ? ? 47.50 87.01 112 17 CYS A 11 ? ? -72.95 46.65 113 17 LEU A 25 ? ? 58.05 -26.41 114 17 LYS A 28 ? ? -55.52 -81.95 115 17 LYS A 29 ? ? -176.21 134.53 116 17 LYS A 30 ? ? -164.58 39.62 117 18 CYS A 4 ? ? -155.62 -55.41 118 18 GLN A 9 ? ? -78.23 22.29 119 18 MET A 21 ? ? -74.08 -163.42 120 18 LEU A 25 ? ? 68.74 -7.79 121 18 LYS A 30 ? ? -160.14 80.95 122 19 CYS A 4 ? ? -141.63 -28.60 123 19 GLN A 9 ? ? -66.50 25.25 124 19 GLU A 19 ? ? -140.52 13.00 125 19 LEU A 25 ? ? 61.22 -18.53 126 19 LYS A 30 ? ? -154.75 64.12 127 20 THR A 10 ? ? 55.15 79.22 128 20 LYS A 16 ? ? -48.71 97.91 129 20 CYS A 23 ? ? -65.85 85.01 130 20 LEU A 25 ? ? 61.26 -18.21 131 20 LYS A 29 ? ? 171.87 136.42 132 20 LYS A 30 ? ? -161.90 34.28 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 2 LYS A 28 ? ? LYS A 29 ? ? 139.08 2 3 GLU A 14 ? ? ARG A 15 ? ? -136.12 3 5 LYS A 6 ? ? TRP A 7 ? ? -144.35 4 5 GLU A 14 ? ? ARG A 15 ? ? -149.67 5 6 MET A 8 ? ? GLN A 9 ? ? 132.74 6 6 TRP A 26 ? ? CYS A 27 ? ? 141.96 7 7 GLY A 1 ? ? PRO A 2 ? ? 146.40 8 9 ARG A 15 ? ? LYS A 16 ? ? 145.86 9 10 GLN A 9 ? ? THR A 10 ? ? -149.97 10 12 GLU A 14 ? ? ARG A 15 ? ? -148.77 11 14 CYS A 11 ? ? ASP A 12 ? ? -139.34 12 15 GLY A 1 ? ? PRO A 2 ? ? 138.48 13 16 CYS A 18 ? ? GLU A 19 ? ? 145.61 14 19 TRP A 26 ? ? CYS A 27 ? ? 146.59 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 9 _pdbx_validate_main_chain_plane.auth_comp_id ARG _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 15 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle -10.18 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 3 ARG A 15 ? ? 0.090 'SIDE CHAIN' 2 5 TYR A 3 ? ? 0.098 'SIDE CHAIN' 3 20 ARG A 15 ? ? 0.106 'SIDE CHAIN' #