HEADER TRANSFERASE/TRANSFERASE INHIBITOR 16-SEP-16 5TD2 TITLE STRUCTURE-BASED OPTIMIZATION OF 1H-IMIDAZOLE-2-CARBOXAMIDES AS AXL TITLE 2 KINASE INHIBITORS UTILIZING A MER MUTANT SURROGATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE MER; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 577-861; COMPND 5 SYNONYM: PROTO-ONCOGENE C-MER,RECEPTOR TYROSINE KINASE MERTK; COMPND 6 EC: 2.7.10.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MERTK, MER; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PSX71 KEYWDS KINASE, INHIBITOR, SURROGATE, ONCOLOGY, TRANSFERASE-TRANSFERASE KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR I.D.HOFFMAN,J.D.LAWSON REVDAT 2 06-MAR-24 5TD2 1 REMARK REVDAT 1 25-JAN-17 5TD2 0 JRNL AUTH W.KEUNG,A.BOLOOR,J.BROWN,A.KIRYANOV,A.GANGLOFF,J.D.LAWSON, JRNL AUTH 2 R.SKENE,I.HOFFMAN,J.ATIENZA,J.KAHANA,R.DE JONG,P.FARRELL, JRNL AUTH 3 D.BALAKRISHNA,P.HALKOWYCZ JRNL TITL STRUCTURE-BASED OPTIMIZATION OF 1H-IMIDAZOLE-2-CARBOXAMIDES JRNL TITL 2 AS AXL KINASE INHIBITORS UTILIZING A MER MUTANT SURROGATE. JRNL REF BIOORG. MED. CHEM. LETT. V. 27 1099 2017 JRNL REFN ESSN 1464-3405 JRNL PMID 28082036 JRNL DOI 10.1016/J.BMCL.2016.12.024 REMARK 2 REMARK 2 RESOLUTION. 2.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.4 REMARK 3 NUMBER OF REFLECTIONS : 15822 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.251 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.300 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 805 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.68 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.75 REMARK 3 REFLECTION IN BIN (WORKING SET) : 794 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 63.62 REMARK 3 BIN R VALUE (WORKING SET) : 0.3420 REMARK 3 BIN FREE R VALUE SET COUNT : 47 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3892 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 24 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.47000 REMARK 3 B22 (A**2) : -2.68000 REMARK 3 B33 (A**2) : -3.87000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.06000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 13.793 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.419 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.374 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.043 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.907 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.860 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4009 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3877 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5410 ; 1.174 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8930 ; 0.972 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 471 ; 5.600 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 174 ;35.437 ;23.793 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 738 ;15.483 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;16.989 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 610 ; 0.063 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4323 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 870 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1917 ; 4.360 ; 6.150 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1916 ; 4.361 ; 6.150 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2377 ; 6.904 ; 9.203 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 6 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 577 592 B 577 592 1656 0.110 0.050 REMARK 3 2 A 600 620 B 600 620 1968 0.090 0.050 REMARK 3 3 A 638 656 B 638 656 1532 0.140 0.050 REMARK 3 4 A 667 687 B 667 687 1932 0.080 0.050 REMARK 3 5 A 694 741 B 694 741 5092 0.070 0.050 REMARK 3 6 A 777 860 B 777 860 9720 0.060 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5TD2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1000224049. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAY-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9764848 REMARK 200 MONOCHROMATOR : ASYMMETRIC CUT SINGLE CRYSTAL REMARK 200 SI(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16671 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.680 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.8 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.10300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 62.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.43900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 29% PEG 400 0.2M MGCL2 0.1M TRIS PH REMARK 280 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 45.97100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 622 REMARK 465 LEU A 623 REMARK 465 ASP A 624 REMARK 465 ASN A 625 REMARK 465 SER A 626 REMARK 465 SER A 627 REMARK 465 GLN A 628 REMARK 465 ARG A 629 REMARK 465 GLU A 630 REMARK 465 ILE A 631 REMARK 465 GLU A 632 REMARK 465 GLU A 633 REMARK 465 PHE A 634 REMARK 465 LEU A 635 REMARK 465 SER A 636 REMARK 465 GLU A 637 REMARK 465 GLN A 662 REMARK 465 GLY A 663 REMARK 465 ILE A 664 REMARK 465 PRO A 665 REMARK 465 LYS A 666 REMARK 465 GLY A 743 REMARK 465 LEU A 744 REMARK 465 SER A 745 REMARK 465 LYS A 746 REMARK 465 LYS A 747 REMARK 465 ILE A 748 REMARK 465 TYR A 749 REMARK 465 SER A 750 REMARK 465 GLY A 751 REMARK 465 ASP A 752 REMARK 465 TYR A 753 REMARK 465 TYR A 754 REMARK 465 ARG A 755 REMARK 465 GLN A 756 REMARK 465 GLY A 757 REMARK 465 ARG A 758 REMARK 465 ILE A 759 REMARK 465 ALA A 760 REMARK 465 LYS A 761 REMARK 465 MET A 762 REMARK 465 ALA A 773 REMARK 465 ASP A 774 REMARK 465 ARG A 775 REMARK 465 VAL A 776 REMARK 465 GLY B 594 REMARK 465 GLU B 595 REMARK 465 GLY B 596 REMARK 465 GLU B 597 REMARK 465 PHE B 598 REMARK 465 GLY B 599 REMARK 465 GLU B 658 REMARK 465 MET B 659 REMARK 465 SER B 660 REMARK 465 SER B 661 REMARK 465 GLN B 662 REMARK 465 GLY B 663 REMARK 465 ILE B 664 REMARK 465 PRO B 665 REMARK 465 GLU B 689 REMARK 465 THR B 690 REMARK 465 GLY B 691 REMARK 465 PRO B 692 REMARK 465 LYS B 693 REMARK 465 GLY B 743 REMARK 465 LEU B 744 REMARK 465 SER B 745 REMARK 465 LYS B 746 REMARK 465 LYS B 747 REMARK 465 ILE B 748 REMARK 465 TYR B 749 REMARK 465 SER B 750 REMARK 465 GLY B 751 REMARK 465 ASP B 752 REMARK 465 TYR B 753 REMARK 465 TYR B 754 REMARK 465 ARG B 755 REMARK 465 GLN B 756 REMARK 465 GLY B 757 REMARK 465 ARG B 758 REMARK 465 ILE B 759 REMARK 465 ALA B 760 REMARK 465 LYS B 761 REMARK 465 MET B 762 REMARK 465 LEU B 772 REMARK 465 ALA B 773 REMARK 465 ASP B 774 REMARK 465 ARG B 775 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 578 47.29 -108.79 REMARK 500 SER A 660 -105.67 -79.67 REMARK 500 LEU A 688 -155.89 -111.24 REMARK 500 THR A 690 -74.23 -149.92 REMARK 500 ASP A 723 45.14 -164.35 REMARK 500 ASP A 741 82.51 65.95 REMARK 500 TYR A 801 67.56 63.06 REMARK 500 GLU A 823 -73.76 -62.72 REMARK 500 ASP A 824 48.23 -103.87 REMARK 500 SER A 860 40.93 -88.22 REMARK 500 GLU B 578 47.56 -103.70 REMARK 500 ASP B 624 106.40 -58.73 REMARK 500 ASP B 723 45.21 -165.30 REMARK 500 ASP B 741 63.15 61.92 REMARK 500 TYR B 801 67.05 62.03 REMARK 500 GLU B 823 -73.85 -62.85 REMARK 500 ASP B 824 48.19 -103.70 REMARK 500 SER B 860 39.87 -87.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 7AE A 1000 DBREF 5TD2 A 577 861 UNP Q12866 MERTK_HUMAN 577 861 DBREF 5TD2 B 577 861 UNP Q12866 MERTK_HUMAN 577 861 SEQADV 5TD2 MET A 650 UNP Q12866 ILE 650 CONFLICT SEQADV 5TD2 MET B 650 UNP Q12866 ILE 650 CONFLICT SEQRES 1 A 285 LEU GLU ASP VAL VAL ILE ASP ARG ASN LEU LEU ILE LEU SEQRES 2 A 285 GLY LYS ILE LEU GLY GLU GLY GLU PHE GLY SER VAL MET SEQRES 3 A 285 GLU GLY ASN LEU LYS GLN GLU ASP GLY THR SER LEU LYS SEQRES 4 A 285 VAL ALA VAL LYS THR MET LYS LEU ASP ASN SER SER GLN SEQRES 5 A 285 ARG GLU ILE GLU GLU PHE LEU SER GLU ALA ALA CYS MET SEQRES 6 A 285 LYS ASP PHE SER HIS PRO ASN VAL MET ARG LEU LEU GLY SEQRES 7 A 285 VAL CYS ILE GLU MET SER SER GLN GLY ILE PRO LYS PRO SEQRES 8 A 285 MET VAL ILE LEU PRO PHE MET LYS TYR GLY ASP LEU HIS SEQRES 9 A 285 THR TYR LEU LEU TYR SER ARG LEU GLU THR GLY PRO LYS SEQRES 10 A 285 HIS ILE PRO LEU GLN THR LEU LEU LYS PHE MET VAL ASP SEQRES 11 A 285 ILE ALA LEU GLY MET GLU TYR LEU SER ASN ARG ASN PHE SEQRES 12 A 285 LEU HIS ARG ASP LEU ALA ALA ARG ASN CYS MET LEU ARG SEQRES 13 A 285 ASP ASP MET THR VAL CYS VAL ALA ASP PHE GLY LEU SER SEQRES 14 A 285 LYS LYS ILE TYR SER GLY ASP TYR TYR ARG GLN GLY ARG SEQRES 15 A 285 ILE ALA LYS MET PRO VAL LYS TRP ILE ALA ILE GLU SER SEQRES 16 A 285 LEU ALA ASP ARG VAL TYR THR SER LYS SER ASP VAL TRP SEQRES 17 A 285 ALA PHE GLY VAL THR MET TRP GLU ILE ALA THR ARG GLY SEQRES 18 A 285 MET THR PRO TYR PRO GLY VAL GLN ASN HIS GLU MET TYR SEQRES 19 A 285 ASP TYR LEU LEU HIS GLY HIS ARG LEU LYS GLN PRO GLU SEQRES 20 A 285 ASP CYS LEU ASP GLU LEU TYR GLU ILE MET TYR SER CYS SEQRES 21 A 285 TRP ARG THR ASP PRO LEU ASP ARG PRO THR PHE SER VAL SEQRES 22 A 285 LEU ARG LEU GLN LEU GLU LYS LEU LEU GLU SER LEU SEQRES 1 B 285 LEU GLU ASP VAL VAL ILE ASP ARG ASN LEU LEU ILE LEU SEQRES 2 B 285 GLY LYS ILE LEU GLY GLU GLY GLU PHE GLY SER VAL MET SEQRES 3 B 285 GLU GLY ASN LEU LYS GLN GLU ASP GLY THR SER LEU LYS SEQRES 4 B 285 VAL ALA VAL LYS THR MET LYS LEU ASP ASN SER SER GLN SEQRES 5 B 285 ARG GLU ILE GLU GLU PHE LEU SER GLU ALA ALA CYS MET SEQRES 6 B 285 LYS ASP PHE SER HIS PRO ASN VAL MET ARG LEU LEU GLY SEQRES 7 B 285 VAL CYS ILE GLU MET SER SER GLN GLY ILE PRO LYS PRO SEQRES 8 B 285 MET VAL ILE LEU PRO PHE MET LYS TYR GLY ASP LEU HIS SEQRES 9 B 285 THR TYR LEU LEU TYR SER ARG LEU GLU THR GLY PRO LYS SEQRES 10 B 285 HIS ILE PRO LEU GLN THR LEU LEU LYS PHE MET VAL ASP SEQRES 11 B 285 ILE ALA LEU GLY MET GLU TYR LEU SER ASN ARG ASN PHE SEQRES 12 B 285 LEU HIS ARG ASP LEU ALA ALA ARG ASN CYS MET LEU ARG SEQRES 13 B 285 ASP ASP MET THR VAL CYS VAL ALA ASP PHE GLY LEU SER SEQRES 14 B 285 LYS LYS ILE TYR SER GLY ASP TYR TYR ARG GLN GLY ARG SEQRES 15 B 285 ILE ALA LYS MET PRO VAL LYS TRP ILE ALA ILE GLU SER SEQRES 16 B 285 LEU ALA ASP ARG VAL TYR THR SER LYS SER ASP VAL TRP SEQRES 17 B 285 ALA PHE GLY VAL THR MET TRP GLU ILE ALA THR ARG GLY SEQRES 18 B 285 MET THR PRO TYR PRO GLY VAL GLN ASN HIS GLU MET TYR SEQRES 19 B 285 ASP TYR LEU LEU HIS GLY HIS ARG LEU LYS GLN PRO GLU SEQRES 20 B 285 ASP CYS LEU ASP GLU LEU TYR GLU ILE MET TYR SER CYS SEQRES 21 B 285 TRP ARG THR ASP PRO LEU ASP ARG PRO THR PHE SER VAL SEQRES 22 B 285 LEU ARG LEU GLN LEU GLU LYS LEU LEU GLU SER LEU HET 7AE A1000 35 HETNAM 7AE N-[2-{4-[(2S)-4-(METHYLSULFONYL)MORPHOLIN-2-YL]-1,3- HETNAM 2 7AE THIAZOL-2-YL}-4-(MORPHOLIN-4-YL)PHENYL]-1H-IMIDAZOLE- HETNAM 3 7AE 2-CARBOXAMIDE FORMUL 3 7AE C22 H26 N6 O5 S2 FORMUL 4 HOH *24(H2 O) HELIX 1 AA1 ASP A 583 ASN A 585 5 3 HELIX 2 AA2 ALA A 639 ASP A 643 1 5 HELIX 3 AA3 LEU A 679 ARG A 687 1 9 HELIX 4 AA4 PRO A 696 ARG A 717 1 22 HELIX 5 AA5 PRO A 763 ILE A 767 5 5 HELIX 6 AA6 THR A 778 THR A 795 1 18 HELIX 7 AA7 GLU A 808 HIS A 815 1 8 HELIX 8 AA8 LEU A 826 CYS A 836 1 11 HELIX 9 AA9 ASP A 840 ARG A 844 5 5 HELIX 10 AB1 THR A 846 SER A 860 1 15 HELIX 11 AB2 ASP B 583 ASN B 585 5 3 HELIX 12 AB3 GLN B 628 ASP B 643 1 16 HELIX 13 AB4 ASP B 678 ARG B 687 1 10 HELIX 14 AB5 PRO B 696 ARG B 717 1 22 HELIX 15 AB6 ALA B 725 ARG B 727 5 3 HELIX 16 AB7 THR B 778 THR B 795 1 18 HELIX 17 AB8 GLU B 808 HIS B 815 1 8 HELIX 18 AB9 LEU B 826 CYS B 836 1 11 HELIX 19 AC1 ASP B 840 ARG B 844 5 5 HELIX 20 AC2 THR B 846 SER B 860 1 15 SHEET 1 AA1 5 LEU A 587 GLU A 595 0 SHEET 2 AA1 5 SER A 600 LYS A 607 -1 O VAL A 601 N LEU A 593 SHEET 3 AA1 5 SER A 613 THR A 620 -1 O VAL A 618 N MET A 602 SHEET 4 AA1 5 MET A 668 PRO A 672 -1 O LEU A 671 N ALA A 617 SHEET 5 AA1 5 GLY A 654 CYS A 656 -1 N CYS A 656 O MET A 668 SHEET 1 AA2 3 GLY A 677 ASP A 678 0 SHEET 2 AA2 3 CYS A 729 LEU A 731 -1 O LEU A 731 N GLY A 677 SHEET 3 AA2 3 VAL A 737 VAL A 739 -1 O CYS A 738 N MET A 730 SHEET 1 AA3 5 LEU B 587 ILE B 592 0 SHEET 2 AA3 5 VAL B 601 LYS B 607 -1 O GLU B 603 N LYS B 591 SHEET 3 AA3 5 SER B 613 THR B 620 -1 O VAL B 618 N MET B 602 SHEET 4 AA3 5 MET B 668 PRO B 672 -1 O LEU B 671 N ALA B 617 SHEET 5 AA3 5 GLY B 654 CYS B 656 -1 N GLY B 654 O ILE B 670 SHEET 1 AA4 2 CYS B 729 LEU B 731 0 SHEET 2 AA4 2 VAL B 737 VAL B 739 -1 O CYS B 738 N MET B 730 SITE 1 AC1 13 GLU A 595 GLY A 596 ALA A 617 LYS A 619 SITE 2 AC1 13 MET A 650 LEU A 671 PRO A 672 PHE A 673 SITE 3 AC1 13 MET A 674 LYS A 675 ASN A 728 MET A 730 SITE 4 AC1 13 ASP A 741 CRYST1 51.157 91.942 69.655 90.00 99.51 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019548 0.000000 0.003275 0.00000 SCALE2 0.000000 0.010876 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014557 0.00000