HEADER REPLICATION 17-SEP-16 5TD8 TITLE CRYSTAL STRUCTURE OF AN EXTENDED DWARF NDC80 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: KINETOCHORE PROTEIN NDC80; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 80 KDA SPINDLE COMPONENT PROTEIN,NUCLEAR DIVISION CYCLE COMPND 5 PROTEIN 80,TWO-HYBRID INTERACTION WITH DMC1 PROTEIN 3,80 KDA SPINDLE COMPND 6 COMPONENT PROTEIN,NUCLEAR DIVISION CYCLE PROTEIN 80,TWO-HYBRID COMPND 7 INTERACTION WITH DMC1 PROTEIN 3; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: KINETOCHORE PROTEIN NUF2; COMPND 11 CHAIN: B; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: KINETOCHORE PROTEIN SPC24; COMPND 15 CHAIN: C; COMPND 16 ENGINEERED: YES; COMPND 17 OTHER_DETAILS: FIRST THREE RESIDUES NOT RESOLVED IN ELECTRON DENSITY COMPND 18 MAP; COMPND 19 MOL_ID: 4; COMPND 20 MOLECULE: KINETOCHORE PROTEIN SPC25; COMPND 21 CHAIN: D; COMPND 22 ENGINEERED: YES; COMPND 23 MOL_ID: 5; COMPND 24 MOLECULE: NANOBODY; COMPND 25 CHAIN: E; COMPND 26 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C); SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292; SOURCE 6 STRAIN: ATCC 204508 / S288C; SOURCE 7 GENE: NDC80, HEC1, TID3, YIL144W; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 12 S288C); SOURCE 13 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 14 ORGANISM_TAXID: 559292; SOURCE 15 STRAIN: ATCC 204508 / S288C; SOURCE 16 GENE: NUF2, YOL069W; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 19 MOL_ID: 3; SOURCE 20 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 21 S288C); SOURCE 22 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 23 ORGANISM_TAXID: 559292; SOURCE 24 STRAIN: ATCC 204508 / S288C; SOURCE 25 GENE: SPC24, YMR117C, YM9718.16C; SOURCE 26 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 27 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 28 MOL_ID: 4; SOURCE 29 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 30 S288C); SOURCE 31 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 32 ORGANISM_TAXID: 559292; SOURCE 33 STRAIN: ATCC 204508 / S288C; SOURCE 34 GENE: SPC25, YER018C; SOURCE 35 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 36 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 37 MOL_ID: 5; SOURCE 38 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 39 ORGANISM_TAXID: 30538; SOURCE 40 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 41 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS RWD, CH, COILED-COIL, TETRAMER, NDC80, KINETOCHORE, REPLICATION, KEYWDS 2 NANOBODY EXPDTA X-RAY DIFFRACTION AUTHOR R.VALVERDE,J.INGRAM,S.C.HARRISON REVDAT 4 20-NOV-19 5TD8 1 REMARK REVDAT 3 22-NOV-17 5TD8 1 REMARK REVDAT 2 30-NOV-16 5TD8 1 JRNL REVDAT 1 16-NOV-16 5TD8 0 JRNL AUTH R.VALVERDE,J.INGRAM,S.C.HARRISON JRNL TITL CONSERVED TETRAMER JUNCTION IN THE KINETOCHORE NDC80 JRNL TITL 2 COMPLEX. JRNL REF CELL REP V. 17 1915 2016 JRNL REFN ESSN 2211-1247 JRNL PMID 27851957 JRNL DOI 10.1016/J.CELREP.2016.10.065 REMARK 2 REMARK 2 RESOLUTION. 7.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 7.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 113.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.030 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 4139 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.313 REMARK 3 R VALUE (WORKING SET) : 0.312 REMARK 3 FREE R VALUE : 0.328 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 203 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.950 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.730 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 6545 REMARK 3 ANGLE : 0.754 8802 REMARK 3 CHIRALITY : 0.044 972 REMARK 3 PLANARITY : 0.005 1143 REMARK 3 DIHEDRAL : 11.910 3989 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 24 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 148 ) REMARK 3 ORIGIN FOR THE GROUP (A): 248.7399 95.1203 29.9164 REMARK 3 T TENSOR REMARK 3 T11: 0.1898 T22: 1.2113 REMARK 3 T33: 0.8780 T12: -0.5397 REMARK 3 T13: -0.5594 T23: -0.2213 REMARK 3 L TENSOR REMARK 3 L11: 0.1774 L22: -0.0009 REMARK 3 L33: -0.0080 L12: 0.0597 REMARK 3 L13: -0.0465 L23: -0.0062 REMARK 3 S TENSOR REMARK 3 S11: -0.0820 S12: -0.0500 S13: -0.1922 REMARK 3 S21: 0.1493 S22: 0.1005 S23: 0.1674 REMARK 3 S31: -0.0814 S32: -0.3532 S33: 0.1946 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 149 THROUGH 212 ) REMARK 3 ORIGIN FOR THE GROUP (A): 260.9653 92.6859 25.3459 REMARK 3 T TENSOR REMARK 3 T11: -1.0552 T22: 1.0541 REMARK 3 T33: 0.9143 T12: -1.4130 REMARK 3 T13: 0.6486 T23: -0.6465 REMARK 3 L TENSOR REMARK 3 L11: 0.0359 L22: 0.1918 REMARK 3 L33: 0.1048 L12: 0.0981 REMARK 3 L13: 0.0266 L23: -0.0075 REMARK 3 S TENSOR REMARK 3 S11: -0.1039 S12: 0.2845 S13: -0.2898 REMARK 3 S21: -0.2867 S22: -0.3726 S23: -0.1851 REMARK 3 S31: -0.0163 S32: 0.0744 S33: -1.4905 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 213 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): 247.8647 107.0908 15.8112 REMARK 3 T TENSOR REMARK 3 T11: 1.9180 T22: 1.5725 REMARK 3 T33: 1.9820 T12: -0.6509 REMARK 3 T13: 0.2009 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.8582 L22: 0.6757 REMARK 3 L33: 0.2215 L12: -0.7367 REMARK 3 L13: -0.3129 L23: 0.1282 REMARK 3 S TENSOR REMARK 3 S11: 0.7736 S12: 0.5255 S13: 0.5564 REMARK 3 S21: -1.3092 S22: 0.3835 S23: 0.4960 REMARK 3 S31: -0.0899 S32: -0.0928 S33: 0.1393 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 267 THROUGH 682 ) REMARK 3 ORIGIN FOR THE GROUP (A): 224.9311 133.7453 -13.5983 REMARK 3 T TENSOR REMARK 3 T11: 0.1832 T22: 0.3187 REMARK 3 T33: 0.3420 T12: 0.7690 REMARK 3 T13: -0.2713 T23: -0.8190 REMARK 3 L TENSOR REMARK 3 L11: -0.0303 L22: -0.1449 REMARK 3 L33: -0.5442 L12: -0.6636 REMARK 3 L13: 0.2772 L23: 0.0680 REMARK 3 S TENSOR REMARK 3 S11: 0.1596 S12: -0.1097 S13: -2.0348 REMARK 3 S21: 0.1558 S22: -0.1818 S23: -0.7360 REMARK 3 S31: 0.2251 S32: -0.0742 S33: -0.3588 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 13 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 273.5989 104.5869 -7.9000 REMARK 3 T TENSOR REMARK 3 T11: 0.4150 T22: 0.2803 REMARK 3 T33: 0.8903 T12: 0.3753 REMARK 3 T13: 0.6712 T23: 0.3964 REMARK 3 L TENSOR REMARK 3 L11: 0.1422 L22: 0.0778 REMARK 3 L33: 0.1258 L12: -0.0364 REMARK 3 L13: -0.0468 L23: -0.0130 REMARK 3 S TENSOR REMARK 3 S11: -0.0043 S12: 0.0933 S13: -0.0982 REMARK 3 S21: -0.1204 S22: -0.0789 S23: -0.0706 REMARK 3 S31: 0.2035 S32: 0.1353 S33: 0.0289 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 33 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): 268.5774 105.9529 1.4447 REMARK 3 T TENSOR REMARK 3 T11: 1.8043 T22: 1.0233 REMARK 3 T33: 1.1717 T12: 0.3911 REMARK 3 T13: -0.7387 T23: -0.0756 REMARK 3 L TENSOR REMARK 3 L11: 0.1345 L22: 0.0959 REMARK 3 L33: 0.5210 L12: 0.1090 REMARK 3 L13: -0.2609 L23: -0.2025 REMARK 3 S TENSOR REMARK 3 S11: 0.0033 S12: -0.0075 S13: -0.0947 REMARK 3 S21: 0.0230 S22: -0.3479 S23: -0.0168 REMARK 3 S31: 0.2792 S32: 1.0485 S33: 0.0301 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 53 THROUGH 451 ) REMARK 3 ORIGIN FOR THE GROUP (A): 245.3280 121.7699 -1.8640 REMARK 3 T TENSOR REMARK 3 T11: 0.3904 T22: 0.6239 REMARK 3 T33: 1.1682 T12: 0.1807 REMARK 3 T13: -0.4860 T23: 0.7015 REMARK 3 L TENSOR REMARK 3 L11: 0.7915 L22: 0.6264 REMARK 3 L33: 0.9828 L12: 0.4167 REMARK 3 L13: -0.0455 L23: 0.1362 REMARK 3 S TENSOR REMARK 3 S11: -0.7965 S12: -0.7263 S13: -0.3213 REMARK 3 S21: 0.1965 S22: -1.0753 S23: -0.3334 REMARK 3 S31: 1.0634 S32: 1.0148 S33: -5.8033 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 4 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): 218.1541 156.3283 -19.2665 REMARK 3 T TENSOR REMARK 3 T11: 1.0073 T22: 0.9471 REMARK 3 T33: 0.8892 T12: 0.1154 REMARK 3 T13: 0.0906 T23: -0.4379 REMARK 3 L TENSOR REMARK 3 L11: 0.0484 L22: 0.0040 REMARK 3 L33: 0.0459 L12: 0.0065 REMARK 3 L13: -0.0334 L23: -0.0171 REMARK 3 S TENSOR REMARK 3 S11: 0.0903 S12: 0.1662 S13: -0.3420 REMARK 3 S21: -0.1898 S22: 0.0451 S23: 0.0767 REMARK 3 S31: 0.2893 S32: 0.7555 S33: -0.0633 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 24 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): 188.0436 196.0228 -11.9599 REMARK 3 T TENSOR REMARK 3 T11: 1.2047 T22: 0.5627 REMARK 3 T33: 0.5363 T12: 0.6907 REMARK 3 T13: 0.8080 T23: -0.2108 REMARK 3 L TENSOR REMARK 3 L11: 0.4314 L22: 0.2703 REMARK 3 L33: -0.0144 L12: -0.4498 REMARK 3 L13: -0.2123 L23: 0.1191 REMARK 3 S TENSOR REMARK 3 S11: 0.1019 S12: -0.3056 S13: 0.4997 REMARK 3 S21: 0.2642 S22: 0.2240 S23: -0.2655 REMARK 3 S31: -0.3288 S32: -0.2283 S33: 0.0902 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 182 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): 160.2169 200.3956 -16.5745 REMARK 3 T TENSOR REMARK 3 T11: 0.8245 T22: 0.4900 REMARK 3 T33: 0.9132 T12: -0.0490 REMARK 3 T13: 0.0090 T23: 0.7782 REMARK 3 L TENSOR REMARK 3 L11: 0.0812 L22: 0.0282 REMARK 3 L33: 0.0593 L12: -0.0504 REMARK 3 L13: 0.0744 L23: -0.0344 REMARK 3 S TENSOR REMARK 3 S11: -0.0721 S12: -0.2663 S13: -0.0536 REMARK 3 S21: -0.0119 S22: -0.1015 S23: -0.0451 REMARK 3 S31: 0.2599 S32: -0.0789 S33: -0.6251 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 200 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 160.4211 208.5888 -21.1737 REMARK 3 T TENSOR REMARK 3 T11: 0.1154 T22: 0.2071 REMARK 3 T33: -0.1600 T12: -0.4686 REMARK 3 T13: -0.0058 T23: -0.1626 REMARK 3 L TENSOR REMARK 3 L11: 0.2853 L22: 0.1971 REMARK 3 L33: 0.1389 L12: 0.2041 REMARK 3 L13: -0.1647 L23: -0.1618 REMARK 3 S TENSOR REMARK 3 S11: 0.0964 S12: -0.2125 S13: 0.0292 REMARK 3 S21: 0.2812 S22: -0.1248 S23: 0.0445 REMARK 3 S31: -0.1027 S32: -0.0501 S33: -0.2168 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 2 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): 193.6653 181.2284 -10.2304 REMARK 3 T TENSOR REMARK 3 T11: 0.0908 T22: 0.2395 REMARK 3 T33: 0.4073 T12: 0.4077 REMARK 3 T13: 0.1650 T23: 0.1902 REMARK 3 L TENSOR REMARK 3 L11: 0.8987 L22: 0.5600 REMARK 3 L33: 0.7437 L12: 0.4299 REMARK 3 L13: 0.0930 L23: 0.1335 REMARK 3 S TENSOR REMARK 3 S11: -0.2110 S12: -0.2070 S13: 0.3912 REMARK 3 S21: 0.0414 S22: -0.0355 S23: 0.3145 REMARK 3 S31: 0.0356 S32: 0.5728 S33: -0.5127 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 146 THROUGH 158 ) REMARK 3 ORIGIN FOR THE GROUP (A): 179.8963 217.8433 -12.3910 REMARK 3 T TENSOR REMARK 3 T11: 1.5200 T22: 1.6966 REMARK 3 T33: 0.9192 T12: 0.2281 REMARK 3 T13: 0.5972 T23: -0.0916 REMARK 3 L TENSOR REMARK 3 L11: 0.1221 L22: 0.0686 REMARK 3 L33: 0.2005 L12: -0.0841 REMARK 3 L13: 0.1408 L23: -0.0654 REMARK 3 S TENSOR REMARK 3 S11: 0.0505 S12: -0.3305 S13: 0.1076 REMARK 3 S21: -0.1009 S22: -0.2313 S23: -0.0734 REMARK 3 S31: -0.1454 S32: 0.1980 S33: -0.1639 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 159 THROUGH 189 ) REMARK 3 ORIGIN FOR THE GROUP (A): 174.6429 222.1140 -13.4449 REMARK 3 T TENSOR REMARK 3 T11: 0.6870 T22: 0.8519 REMARK 3 T33: 0.9998 T12: -0.3457 REMARK 3 T13: -0.3672 T23: 0.6229 REMARK 3 L TENSOR REMARK 3 L11: 0.0134 L22: 2.3724 REMARK 3 L33: 0.4515 L12: -0.1618 REMARK 3 L13: 0.0576 L23: -1.0343 REMARK 3 S TENSOR REMARK 3 S11: -0.0248 S12: 0.0750 S13: 0.0907 REMARK 3 S21: 0.7248 S22: 0.0619 S23: 0.0622 REMARK 3 S31: -0.2822 S32: -0.1454 S33: 0.1430 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 190 THROUGH 205 ) REMARK 3 ORIGIN FOR THE GROUP (A): 165.2652 224.0112 -5.2963 REMARK 3 T TENSOR REMARK 3 T11: 2.0541 T22: 0.9056 REMARK 3 T33: 1.2636 T12: 0.3013 REMARK 3 T13: 0.2972 T23: -0.7583 REMARK 3 L TENSOR REMARK 3 L11: 0.1227 L22: 0.0109 REMARK 3 L33: 0.0157 L12: -0.0130 REMARK 3 L13: -0.0438 L23: 0.0107 REMARK 3 S TENSOR REMARK 3 S11: 0.0615 S12: 0.0212 S13: 0.0622 REMARK 3 S21: -0.1460 S22: -0.0043 S23: -0.0313 REMARK 3 S31: -0.2293 S32: 0.0415 S33: 0.0415 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 206 THROUGH 221 ) REMARK 3 ORIGIN FOR THE GROUP (A): 165.6279 219.8386 -15.9175 REMARK 3 T TENSOR REMARK 3 T11: 0.9471 T22: 1.1966 REMARK 3 T33: 0.3653 T12: 1.0414 REMARK 3 T13: -0.0106 T23: -0.2605 REMARK 3 L TENSOR REMARK 3 L11: 0.0469 L22: 0.0122 REMARK 3 L33: 0.1175 L12: -0.0309 REMARK 3 L13: -0.0759 L23: 0.0412 REMARK 3 S TENSOR REMARK 3 S11: -0.1180 S12: -0.0324 S13: 0.0008 REMARK 3 S21: -0.0704 S22: 0.0019 S23: 0.0531 REMARK 3 S31: -0.0601 S32: 0.0270 S33: -0.2414 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 3 THROUGH 8 ) REMARK 3 ORIGIN FOR THE GROUP (A): 203.1197 151.9217 -33.8209 REMARK 3 T TENSOR REMARK 3 T11: 0.4292 T22: 0.1999 REMARK 3 T33: 0.4450 T12: -0.4265 REMARK 3 T13: -0.2866 T23: -0.2407 REMARK 3 L TENSOR REMARK 3 L11: 0.0002 L22: 0.0656 REMARK 3 L33: 0.0032 L12: -0.0028 REMARK 3 L13: 0.0007 L23: 0.0226 REMARK 3 S TENSOR REMARK 3 S11: -0.0041 S12: 0.0128 S13: -0.0118 REMARK 3 S21: -0.0070 S22: 0.0398 S23: -0.0958 REMARK 3 S31: -0.0347 S32: 0.0003 S33: 0.0295 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 9 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): 193.6001 162.3840 -33.3096 REMARK 3 T TENSOR REMARK 3 T11: 1.2372 T22: 0.9507 REMARK 3 T33: 0.5340 T12: -0.4422 REMARK 3 T13: 0.2196 T23: 0.2530 REMARK 3 L TENSOR REMARK 3 L11: 0.0759 L22: 0.0644 REMARK 3 L33: 0.1317 L12: 0.0409 REMARK 3 L13: 0.0571 L23: 0.0724 REMARK 3 S TENSOR REMARK 3 S11: -0.3569 S12: 0.1034 S13: -0.1743 REMARK 3 S21: -0.1057 S22: -0.0580 S23: -0.1084 REMARK 3 S31: 0.1023 S32: 0.0629 S33: -0.3635 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 27 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 207.4313 161.6139 -35.0031 REMARK 3 T TENSOR REMARK 3 T11: 0.3642 T22: 0.1160 REMARK 3 T33: 0.3781 T12: -0.1390 REMARK 3 T13: -0.3777 T23: 0.0565 REMARK 3 L TENSOR REMARK 3 L11: 0.0041 L22: 0.0502 REMARK 3 L33: 0.0098 L12: 0.0305 REMARK 3 L13: -0.0060 L23: -0.0223 REMARK 3 S TENSOR REMARK 3 S11: -0.0292 S12: -0.0512 S13: 0.1035 REMARK 3 S21: 0.0170 S22: -0.0671 S23: -0.0126 REMARK 3 S31: -0.1266 S32: 0.0472 S33: -0.0477 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 41 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 207.2587 168.5125 -35.0942 REMARK 3 T TENSOR REMARK 3 T11: 0.4821 T22: 0.2812 REMARK 3 T33: 0.1259 T12: 0.1316 REMARK 3 T13: -0.6213 T23: -0.0905 REMARK 3 L TENSOR REMARK 3 L11: 0.3167 L22: 0.1876 REMARK 3 L33: 0.1399 L12: -0.2083 REMARK 3 L13: 0.1745 L23: -0.1315 REMARK 3 S TENSOR REMARK 3 S11: -0.0037 S12: 0.2668 S13: 0.0436 REMARK 3 S21: -0.1872 S22: -0.1152 S23: 0.2091 REMARK 3 S31: -0.0186 S32: 0.1662 S33: -0.3848 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 69 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 202.3190 161.4598 -26.0630 REMARK 3 T TENSOR REMARK 3 T11: 0.9884 T22: 0.6788 REMARK 3 T33: 0.1216 T12: 0.9913 REMARK 3 T13: 0.2638 T23: 0.2276 REMARK 3 L TENSOR REMARK 3 L11: 0.0632 L22: 0.0085 REMARK 3 L33: 0.0603 L12: -0.0068 REMARK 3 L13: -0.0639 L23: 0.0091 REMARK 3 S TENSOR REMARK 3 S11: 0.0083 S12: 0.1115 S13: 0.0113 REMARK 3 S21: -0.0449 S22: -0.0712 S23: 0.0236 REMARK 3 S31: -0.0085 S32: -0.1109 S33: -0.2685 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 85 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 198.0192 167.3056 -38.6415 REMARK 3 T TENSOR REMARK 3 T11: 1.2990 T22: 0.6133 REMARK 3 T33: 0.6005 T12: -0.1082 REMARK 3 T13: 0.1197 T23: 0.2797 REMARK 3 L TENSOR REMARK 3 L11: 0.2256 L22: 0.0213 REMARK 3 L33: 0.1504 L12: 0.0630 REMARK 3 L13: 0.1794 L23: 0.0486 REMARK 3 S TENSOR REMARK 3 S11: 0.2727 S12: 0.2559 S13: 0.1353 REMARK 3 S21: 0.1413 S22: 0.0667 S23: -0.0149 REMARK 3 S31: 0.3743 S32: -0.2740 S33: 0.3808 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 100 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): 212.8713 156.0684 -36.1034 REMARK 3 T TENSOR REMARK 3 T11: 0.5852 T22: 0.8291 REMARK 3 T33: 1.4564 T12: 0.8606 REMARK 3 T13: 0.2823 T23: -0.3493 REMARK 3 L TENSOR REMARK 3 L11: 0.1029 L22: 0.1052 REMARK 3 L33: 0.0857 L12: 0.0859 REMARK 3 L13: -0.0274 L23: -0.0777 REMARK 3 S TENSOR REMARK 3 S11: 0.0389 S12: -0.0626 S13: 0.1041 REMARK 3 S21: -0.0148 S22: -0.0178 S23: -0.0520 REMARK 3 S31: -0.0284 S32: 0.0029 S33: 0.2167 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 122 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 191.2904 165.2359 -41.6967 REMARK 3 T TENSOR REMARK 3 T11: 0.8111 T22: 0.5344 REMARK 3 T33: 1.1795 T12: -0.4064 REMARK 3 T13: -0.3592 T23: -0.3011 REMARK 3 L TENSOR REMARK 3 L11: 0.0425 L22: 0.0105 REMARK 3 L33: 0.0280 L12: 0.0106 REMARK 3 L13: 0.0028 L23: 0.0143 REMARK 3 S TENSOR REMARK 3 S11: -0.0189 S12: -0.0155 S13: 0.0456 REMARK 3 S21: -0.0221 S22: -0.0350 S23: 0.0227 REMARK 3 S31: -0.1361 S32: -0.0336 S33: 0.0084 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5TD8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1000224054. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.008 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS, AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4140 REMARK 200 RESOLUTION RANGE HIGH (A) : 7.530 REMARK 200 RESOLUTION RANGE LOW (A) : 113.413 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : 0.11200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 7.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 7.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 15.00 REMARK 200 R MERGE FOR SHELL (I) : 2.17000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% PEG 4,000, 0.1 M CHES, PH 9.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 113.41250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 113.41250 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 118.63500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 113.41250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 59.31750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 113.41250 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 177.95250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 113.41250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 177.95250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 113.41250 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 59.31750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 113.41250 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 113.41250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 118.63500 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 113.41250 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 113.41250 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 118.63500 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 113.41250 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 177.95250 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 113.41250 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 59.31750 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 113.41250 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 59.31750 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 113.41250 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 177.95250 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 113.41250 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 113.41250 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 118.63500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 111 REMARK 465 ASN A 112 REMARK 465 ALA A 113 REMARK 465 ARG A 114 REMARK 465 GLU A 250 REMARK 465 ILE A 251 REMARK 465 THR A 252 REMARK 465 ILE A 253 REMARK 465 LEU A 254 REMARK 465 SER A 255 REMARK 465 GLN A 256 REMARK 465 PRO A 257 REMARK 465 LEU A 258 REMARK 465 LYS A 259 REMARK 465 PHE A 683 REMARK 465 GLU A 684 REMARK 465 THR A 685 REMARK 465 GLU A 686 REMARK 465 HIS A 687 REMARK 465 ASN A 688 REMARK 465 VAL A 689 REMARK 465 THR A 690 REMARK 465 ASN A 691 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ARG B 3 REMARK 465 ASN B 4 REMARK 465 GLN B 5 REMARK 465 ASP B 6 REMARK 465 VAL B 7 REMARK 465 PHE B 8 REMARK 465 PRO B 9 REMARK 465 ILE B 10 REMARK 465 LEU B 11 REMARK 465 ASP B 12 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 GLN C 3 REMARK 465 MET D 1 REMARK 465 MET E 1 REMARK 465 GLN E 2 REMARK 465 ARG E 28 REMARK 465 THR E 29 REMARK 465 GLY E 30 REMARK 465 SER E 31 REMARK 465 ARG E 32 REMARK 465 TYR E 61 REMARK 465 ALA E 62 REMARK 465 ASP E 63 REMARK 465 SER E 64 REMARK 465 SER E 103 REMARK 465 GLY E 104 REMARK 465 THR E 105 REMARK 465 TYR E 106 REMARK 465 SER E 107 REMARK 465 SER E 108 REMARK 465 THR E 109 REMARK 465 TYR E 110 REMARK 465 ASP E 111 REMARK 465 ARG E 112 REMARK 465 ASP E 113 REMARK 465 ASP E 114 REMARK 465 GLY E 129 REMARK 465 GLY E 130 REMARK 465 GLY E 131 REMARK 465 LEU E 132 REMARK 465 PRO E 133 REMARK 465 GLU E 134 REMARK 465 THR E 135 REMARK 465 GLY E 136 REMARK 465 GLY E 137 REMARK 465 LEU E 138 REMARK 465 GLU E 139 REMARK 465 HIS E 140 REMARK 465 HIS E 141 REMARK 465 HIS E 142 REMARK 465 HIS E 143 REMARK 465 HIS E 144 REMARK 465 HIS E 145 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PHE B 143 H MET B 147 1.41 REMARK 500 O ARG D 44 H LEU D 140 1.41 REMARK 500 O MET B 147 H LEU B 151 1.42 REMARK 500 O GLN B 146 H LEU B 150 1.42 REMARK 500 O GLU B 148 H GLY B 152 1.43 REMARK 500 O LEU B 145 H SER B 149 1.44 REMARK 500 O SER B 142 H GLN B 146 1.44 REMARK 500 O GLN D 23 H ARG D 27 1.50 REMARK 500 OE1 GLN A 246 HZ2 LYS A 277 1.53 REMARK 500 O ALA D 22 H ALA D 26 1.54 REMARK 500 O SER B 149 H GLN B 153 1.55 REMARK 500 O LYS C 55 HG SER C 59 1.57 REMARK 500 O ILE B 430 HG SER B 433 1.58 REMARK 500 O MET D 14 H GLN D 18 1.60 REMARK 500 OE1 GLN A 249 NH1 ARG A 270 2.07 REMARK 500 OH TYR C 165 O LEU D 147 2.09 REMARK 500 O SER B 34 OG1 THR B 37 2.13 REMARK 500 O GLU B 148 N GLY B 152 2.13 REMARK 500 O LYS C 55 OG SER C 59 2.13 REMARK 500 O GLU C 46 N ILE C 49 2.18 REMARK 500 O PHE B 143 N MET B 147 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 H SER A 213 OD1 ASP C 37 3745 1.54 REMARK 500 N SER A 213 OD1 ASP C 37 3745 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU C 162 CA - CB - CG ANGL. DEV. = 18.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 140 39.85 70.04 REMARK 500 PHE A 153 75.15 42.82 REMARK 500 GLN A 266 -2.84 66.64 REMARK 500 MET A 274 -70.02 -45.70 REMARK 500 LEU A 293 -62.88 -98.10 REMARK 500 TYR A 297 -77.79 -81.40 REMARK 500 PHE A 311 -72.03 -56.37 REMARK 500 PRO B 36 62.05 -63.46 REMARK 500 GLU B 67 -73.80 -95.44 REMARK 500 ASN B 107 -3.09 62.78 REMARK 500 MET B 108 16.95 59.02 REMARK 500 LEU B 111 -65.59 -91.67 REMARK 500 ARG B 118 -70.76 -77.52 REMARK 500 ALA D 187 71.75 63.23 REMARK 500 ALA E 93 171.39 178.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 702 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 235 O REMARK 620 2 CYS A 235 SG 86.4 REMARK 620 3 SER B 64 O 165.9 105.6 REMARK 620 4 SER B 64 OG 130.2 58.4 63.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 701 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 282 OH REMARK 620 2 CYS B 140 SG 120.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG D 302 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET D 175 O REMARK 620 2 MET D 175 SD 91.1 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG D 302 DBREF 5TD8 A 114 318 UNP P40460 NDC80_YEAST 114 318 DBREF 5TD8 A 621 691 UNP P40460 NDC80_YEAST 621 691 DBREF 5TD8 B 1 153 UNP P33895 NUF2_YEAST 1 153 DBREF 5TD8 B 407 451 UNP P33895 NUF2_YEAST 407 451 DBREF 5TD8 C 1 62 UNP Q04477 SPC24_YEAST 1 62 DBREF 5TD8 C 162 213 UNP Q04477 SPC24_YEAST 162 213 DBREF 5TD8 D 1 45 UNP P40014 SPC25_YEAST 1 45 DBREF 5TD8 D 138 221 UNP P40014 SPC25_YEAST 138 221 DBREF 5TD8 E 1 145 PDB 5TD8 5TD8 1 145 SEQADV 5TD8 SER A 111 UNP P40460 EXPRESSION TAG SEQADV 5TD8 ASN A 112 UNP P40460 EXPRESSION TAG SEQADV 5TD8 ALA A 113 UNP P40460 EXPRESSION TAG SEQRES 1 A 279 SER ASN ALA ARG ASP PRO ARG PRO LEU ARG ASP LYS ASN SEQRES 2 A 279 PHE GLN SER ALA ILE GLN GLU GLU ILE TYR ASP TYR LEU SEQRES 3 A 279 LYS LYS ASN LYS PHE ASP ILE GLU THR ASN HIS PRO ILE SEQRES 4 A 279 SER ILE LYS PHE LEU LYS GLN PRO THR GLN LYS GLY PHE SEQRES 5 A 279 ILE ILE ILE PHE LYS TRP LEU TYR LEU ARG LEU ASP PRO SEQRES 6 A 279 GLY TYR GLY PHE THR LYS SER ILE GLU ASN GLU ILE TYR SEQRES 7 A 279 GLN ILE LEU LYS ASN LEU ARG TYR PRO PHE LEU GLU SER SEQRES 8 A 279 ILE ASN LYS SER GLN ILE SER ALA VAL GLY GLY SER ASN SEQRES 9 A 279 TRP HIS LYS PHE LEU GLY MET LEU HIS TRP MET VAL ARG SEQRES 10 A 279 THR ASN ILE LYS LEU ASP MET CYS LEU ASN LYS VAL ASP SEQRES 11 A 279 ARG SER LEU ILE ASN GLN ASN THR GLN GLU ILE THR ILE SEQRES 12 A 279 LEU SER GLN PRO LEU LYS THR LEU ASP GLU GLN ASP GLN SEQRES 13 A 279 ARG GLN GLU ARG TYR GLU LEU MET VAL GLU LYS LEU LEU SEQRES 14 A 279 ILE ASP TYR PHE THR GLU SER TYR LYS SER PHE LEU LYS SEQRES 15 A 279 LEU GLU ASP ASN TYR GLU PRO SER MET GLN GLU LEU LYS SEQRES 16 A 279 LEU GLY PHE GLU LYS PHE VAL HIS ILE ILE ASN THR ASP SEQRES 17 A 279 VAL THR SER THR GLU LEU LYS LEU GLU GLU LEU LYS VAL SEQRES 18 A 279 ASP LEU ASN ARG LYS ARG TYR LYS LEU HIS GLN GLN VAL SEQRES 19 A 279 ILE HIS VAL ILE ASP ILE THR SER LYS PHE LYS ILE ASN SEQRES 20 A 279 ILE GLN SER SER LEU GLU ASN SER GLU ASN GLU LEU GLY SEQRES 21 A 279 ASN VAL ILE GLU GLU LEU ARG ASN LEU GLU PHE GLU THR SEQRES 22 A 279 GLU HIS ASN VAL THR ASN SEQRES 1 B 198 MET SER ARG ASN GLN ASP VAL PHE PRO ILE LEU ASP LEU SEQRES 2 B 198 GLN GLU LEU VAL ILE CYS LEU GLN SER CYS ASP PHE ALA SEQRES 3 B 198 LEU ALA THR GLN GLU ASN ILE SER ARG PRO THR SER ASP SEQRES 4 B 198 TYR MET VAL THR LEU TYR LYS GLN ILE ILE GLU ASN PHE SEQRES 5 B 198 MET GLY ILE SER VAL GLU SER LEU LEU ASN SER SER ASN SEQRES 6 B 198 GLN GLU THR GLY ASP GLY HIS LEU GLN GLU GLU ASN GLU SEQRES 7 B 198 ASN ILE TYR LEU ASP THR LEU ASN VAL LEU VAL LEU ASN SEQRES 8 B 198 LYS ILE CYS PHE LYS PHE PHE GLU ASN ILE GLY VAL GLN SEQRES 9 B 198 ASP PHE ASN MET THR ASP LEU TYR LYS PRO GLU ALA GLN SEQRES 10 B 198 ARG THR GLN ARG LEU LEU SER ALA VAL VAL ASN TYR ALA SEQRES 11 B 198 ARG PHE ARG GLU GLU ARG MET PHE ASP CYS ASN SER PHE SEQRES 12 B 198 ILE LEU GLN MET GLU SER LEU LEU GLY GLN ILE ASN LYS SEQRES 13 B 198 LEU ASN ASP GLU ILE LYS GLN LEU GLN LYS ASP PHE GLU SEQRES 14 B 198 VAL GLU VAL LYS GLU ILE GLU ILE GLU TYR SER LEU LEU SEQRES 15 B 198 SER GLY HIS ILE ASN LYS TYR MET ASN GLU MET LEU GLU SEQRES 16 B 198 TYR MET GLN SEQRES 1 C 114 MET SER GLN LYS ASP ASN LEU LEU ASP ASN PRO VAL GLU SEQRES 2 C 114 PHE LEU LYS GLU VAL ARG GLU SER PHE ASP ILE GLN GLN SEQRES 3 C 114 ASP VAL ASP ALA MET LYS ARG ILE ARG HIS ASP LEU ASP SEQRES 4 C 114 VAL ILE LYS GLU GLU SER GLU ALA ARG ILE SER LYS GLU SEQRES 5 C 114 HIS SER LYS VAL SER GLU SER ASN LYS LYS LEU LYS LEU SEQRES 6 C 114 TYR ARG SER LEU GLY VAL ILE LEU ASP LEU GLU ASN ASP SEQRES 7 C 114 GLN VAL LEU ILE ASN ARG LYS ASN ASP GLY ASN ILE ASP SEQRES 8 C 114 ILE LEU PRO LEU ASP ASN ASN LEU SER ASP PHE TYR LYS SEQRES 9 C 114 THR LYS TYR ILE TRP GLU ARG LEU GLY LYS SEQRES 1 D 129 MET ALA SER ILE ASP ALA PHE SER ASP LEU GLU ARG ARG SEQRES 2 D 129 MET ASP GLY PHE GLN LYS ASP VAL ALA GLN VAL LEU ALA SEQRES 3 D 129 ARG GLN GLN ASN HIS ALA ARG GLN GLN LEU GLN GLN PHE SEQRES 4 D 129 GLN ALA GLU MET ARG GLN VAL ALA LEU TYR GLU ARG LEU SEQRES 5 D 129 LEU GLN LEU ARG VAL LEU PRO GLY ALA SER ASP VAL HIS SEQRES 6 D 129 ASP VAL ARG PHE VAL PHE GLY ASP ASP SER ARG CYS TRP SEQRES 7 D 129 ILE GLU VAL ALA MET HIS GLY ASP HIS VAL ILE GLY ASN SEQRES 8 D 129 SER HIS PRO ALA LEU ASP PRO LYS SER ARG ALA THR LEU SEQRES 9 D 129 GLU HIS VAL LEU THR VAL GLN GLY ASP LEU ALA ALA PHE SEQRES 10 D 129 LEU VAL VAL ALA ARG ASP MET LEU LEU ALA SER LEU SEQRES 1 E 145 MET GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL SEQRES 2 E 145 HIS PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER SEQRES 3 E 145 GLY ARG THR GLY SER ARG HIS ALA VAL ALA TRP PHE ARG SEQRES 4 E 145 GLN ALA PRO GLY LYS GLU ARG ASP PHE VAL ALA SER ILE SEQRES 5 E 145 ASN ALA VAL GLY LEU VAL ARG ASN TYR ALA ASP SER VAL SEQRES 6 E 145 LEU GLY ARG PHE SER ILE SER ARG ASP PHE ALA LYS ASN SEQRES 7 E 145 GLU VAL TYR LEU GLN MET ASN SER LEU GLU PRO GLU ASP SEQRES 8 E 145 THR ALA VAL TYR TYR CYS ALA ALA ARG TYR TYR SER GLY SEQRES 9 E 145 THR TYR SER SER THR TYR ASP ARG ASP ASP TYR ASP TYR SEQRES 10 E 145 TRP GLY GLN GLY THR GLN VAL THR VAL SER SER GLY GLY SEQRES 11 E 145 GLY LEU PRO GLU THR GLY GLY LEU GLU HIS HIS HIS HIS SEQRES 12 E 145 HIS HIS HET HG A 701 1 HET HG A 702 1 HET HG B 501 1 HET HG B 502 1 HET HG D 301 1 HET HG D 302 1 HETNAM HG MERCURY (II) ION FORMUL 6 HG 6(HG 2+) HELIX 1 AA1 ASP A 121 ASN A 139 1 19 HELIX 2 AA2 LYS A 140 THR A 145 1 6 HELIX 3 AA3 THR A 158 ASP A 174 1 17 HELIX 4 AA4 SER A 182 ASN A 185 5 4 HELIX 5 AA5 GLU A 186 ARG A 195 1 10 HELIX 6 AA6 PHE A 198 ILE A 202 5 5 HELIX 7 AA7 ASN A 203 SER A 208 1 6 HELIX 8 AA8 ASN A 214 GLN A 249 1 36 HELIX 9 AA9 GLN A 266 LYS A 292 1 27 HELIX 10 AB1 TYR A 297 ARG A 679 1 81 HELIX 11 AB2 GLN B 14 CYS B 23 1 10 HELIX 12 AB3 ASP B 39 MET B 53 1 15 HELIX 13 AB4 SER B 56 ASN B 65 1 10 HELIX 14 AB5 TYR B 81 ILE B 101 1 21 HELIX 15 AB6 MET B 108 LYS B 113 1 6 HELIX 16 AB7 GLU B 115 CYS B 140 1 26 HELIX 17 AB8 CYS B 140 MET B 450 1 58 HELIX 18 AB9 ASN C 10 SER C 21 1 12 HELIX 19 AC1 ASP C 23 LYS C 51 1 29 HELIX 20 AC2 SER C 57 LEU C 168 1 13 HELIX 21 AC3 SER C 199 GLY C 212 1 14 HELIX 22 AC4 SER D 3 ASP D 5 5 3 HELIX 23 AC5 ALA D 6 GLN D 146 1 49 HELIX 24 AC6 ASP D 189 VAL D 202 1 14 HELIX 25 AC7 ASP D 205 LEU D 221 1 17 HELIX 26 AC8 GLU E 88 THR E 92 5 5 SHEET 1 AA1 3 VAL C 170 ASP C 173 0 SHEET 2 AA1 3 GLN C 178 ILE C 181 -1 O GLN C 178 N ASP C 173 SHEET 3 AA1 3 ASP C 190 PRO C 193 -1 O LEU C 192 N VAL C 179 SHEET 1 AA2 3 LEU D 147 PRO D 151 0 SHEET 2 AA2 3 VAL D 159 PHE D 163 -1 O ARG D 160 N LEU D 150 SHEET 3 AA2 3 CYS D 169 VAL D 173 -1 O ILE D 171 N PHE D 161 SHEET 1 AA3 4 GLN E 4 SER E 8 0 SHEET 2 AA3 4 LEU E 19 SER E 26 -1 O ALA E 24 N VAL E 6 SHEET 3 AA3 4 GLU E 79 MET E 84 -1 O MET E 84 N LEU E 19 SHEET 4 AA3 4 PHE E 69 ASP E 74 -1 N SER E 70 O GLN E 83 SHEET 1 AA4 6 GLY E 11 VAL E 13 0 SHEET 2 AA4 6 THR E 122 VAL E 126 1 O THR E 125 N VAL E 13 SHEET 3 AA4 6 ALA E 93 ALA E 99 -1 N TYR E 95 O THR E 122 SHEET 4 AA4 6 VAL E 35 GLN E 40 -1 N PHE E 38 O TYR E 96 SHEET 5 AA4 6 ASP E 47 ILE E 52 -1 O ASP E 47 N ARG E 39 SHEET 6 AA4 6 VAL E 58 ARG E 59 -1 O ARG E 59 N SER E 51 SHEET 1 AA5 4 GLY E 11 VAL E 13 0 SHEET 2 AA5 4 THR E 122 VAL E 126 1 O THR E 125 N VAL E 13 SHEET 3 AA5 4 ALA E 93 ALA E 99 -1 N TYR E 95 O THR E 122 SHEET 4 AA5 4 TYR E 117 TRP E 118 -1 O TYR E 117 N ALA E 99 SSBOND 1 CYS E 23 CYS E 97 1555 1555 2.03 LINK O CYS A 235 HG HG A 702 1555 1555 2.55 LINK SG CYS A 235 HG HG A 702 1555 1555 2.37 LINK OH TYR A 282 HG HG A 701 1555 1555 2.58 LINK SG CYS B 23 HG HG B 501 1555 1555 2.74 LINK O SER B 64 HG HG A 702 1555 1555 2.78 LINK OG SER B 64 HG HG A 702 1555 1555 2.74 LINK SG CYS B 94 HG HG B 502 1555 1555 3.07 LINK SG CYS B 140 HG HG A 701 1555 1555 2.76 LINK O MET D 175 HG HG D 302 1555 1555 2.76 LINK SD MET D 175 HG HG D 302 1555 1555 3.12 SITE 1 AC1 3 TYR A 282 LEU A 304 CYS B 140 SITE 1 AC2 2 CYS A 235 SER B 64 SITE 1 AC3 3 CYS B 23 PHE B 52 VAL B 127 SITE 1 AC4 5 TYR B 45 ILE B 49 CYS B 94 PHE B 97 SITE 2 AC4 5 PHE B 98 SITE 1 AC5 3 PHE D 163 CYS D 169 LEU D 217 SITE 1 AC6 2 ALA D 174 MET D 175 CRYST1 226.825 226.825 237.270 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004409 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004409 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004215 0.00000