HEADER VIRAL PROTEIN 19-SEP-16 5TDL TITLE CRYSTAL STRUCTURE OF PREFUSION-STABILIZED BOVINE RSV FUSION TITLE 2 GLYCOPROTEIN (SINGLE-CHAIN DS2-V1 VARIANT: STRAIN 391-2 SC9 DS-CAV1 TITLE 3 Q98C Q361C) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BOVINE PREFUSION RSV F GLYCOPROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: COLLAR PROTEIN,WHISKER ANTIGEN CONTROL PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOVINE RESPIRATORY SYNCYTIAL VIRUS (STRAIN SOURCE 3 COPENHAGEN), ENTEROBACTERIA PHAGE T4; SOURCE 4 ORGANISM_COMMON: BRS; SOURCE 5 ORGANISM_TAXID: 11248, 10665; SOURCE 6 STRAIN: COPENHAGEN; SOURCE 7 GENE: WAC; SOURCE 8 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS BOVINE RSV F, PRE-FUSION STABILIZED, SINGLE CHAIN, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.CHEN,B.ZHANG,P.D.KWONG REVDAT 4 13-NOV-24 5TDL 1 JRNL HETSYN REVDAT 3 29-JUL-20 5TDL 1 COMPND REMARK HETNAM SSBOND REVDAT 3 2 1 LINK SITE REVDAT 2 25-OCT-17 5TDL 1 JRNL REVDAT 1 16-AUG-17 5TDL 0 JRNL AUTH B.ZHANG,L.CHEN,C.SILACCI,M.THOM,J.C.BOYINGTON,A.DRUZ, JRNL AUTH 2 M.G.JOYCE,E.GUZMAN,W.P.KONG,Y.T.LAI,G.B.E.STEWART-JONES, JRNL AUTH 3 Y.TSYBOVSKY,Y.YANG,T.ZHOU,U.BAXA,J.R.MASCOLA,D.CORTI, JRNL AUTH 4 A.LANZAVECCHIA,G.TAYLOR,P.D.KWONG JRNL TITL PROTECTION OF CALVES BY A PREFUSION-STABILIZED BOVINE RSV F JRNL TITL 2 VACCINE. JRNL REF NPJ VACCINES V. 2 7 2017 JRNL REFN ESSN 2059-0105 JRNL PMID 29021918 JRNL DOI 10.1038/S41541-017-0005-9 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 11445 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.257 REMARK 3 R VALUE (WORKING SET) : 0.256 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 572 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3484 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 162.1 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.390 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5TDL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1000224078. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAY-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11445 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 REMARK 200 RESOLUTION RANGE LOW (A) : 40.558 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 10.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.9 M OF POTASSIUM AND SODIUM REMARK 280 TARTRATE, 0.16 M OF LITHIUM SULFATE, 0.1 M CHES, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 86.03600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.03600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 86.03600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 86.03600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 86.03600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 86.03600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 86.03600 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 86.03600 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 86.03600 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 86.03600 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 86.03600 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 86.03600 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 86.03600 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 86.03600 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 86.03600 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 86.03600 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 86.03600 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 86.03600 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 129.05400 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 43.01800 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 43.01800 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 129.05400 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 129.05400 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 129.05400 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 43.01800 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 43.01800 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 129.05400 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 43.01800 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 129.05400 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 43.01800 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 129.05400 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 43.01800 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 43.01800 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 43.01800 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 129.05400 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 43.01800 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 129.05400 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 129.05400 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 129.05400 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 43.01800 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 43.01800 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 129.05400 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 129.05400 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 43.01800 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 43.01800 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 43.01800 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 43.01800 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 129.05400 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 43.01800 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 129.05400 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 43.01800 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 129.05400 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 129.05400 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 129.05400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 56160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 THR A 4 REMARK 465 ALA A 5 REMARK 465 MET A 6 REMARK 465 ARG A 7 REMARK 465 MET A 8 REMARK 465 ILE A 9 REMARK 465 ILE A 10 REMARK 465 SER A 11 REMARK 465 ILE A 12 REMARK 465 ILE A 13 REMARK 465 PHE A 14 REMARK 465 ILE A 15 REMARK 465 SER A 16 REMARK 465 THR A 17 REMARK 465 TYR A 18 REMARK 465 MET A 19 REMARK 465 THR A 20 REMARK 465 HIS A 21 REMARK 465 ILE A 22 REMARK 465 THR A 23 REMARK 465 LEU A 24 REMARK 465 CYS A 25 REMARK 465 LEU A 513 REMARK 465 SER A 514 REMARK 465 ALA A 515 REMARK 465 ILE A 516 REMARK 465 GLY A 517 REMARK 465 GLY A 518 REMARK 465 TYR A 519 REMARK 465 ILE A 520 REMARK 465 PRO A 521 REMARK 465 GLU A 522 REMARK 465 ALA A 523 REMARK 465 PRO A 524 REMARK 465 ARG A 525 REMARK 465 ASP A 526 REMARK 465 GLY A 527 REMARK 465 GLN A 528 REMARK 465 ALA A 529 REMARK 465 TYR A 530 REMARK 465 VAL A 531 REMARK 465 ARG A 532 REMARK 465 LYS A 533 REMARK 465 ASP A 534 REMARK 465 GLY A 535 REMARK 465 GLU A 536 REMARK 465 TRP A 537 REMARK 465 VAL A 538 REMARK 465 LEU A 539 REMARK 465 LEU A 540 REMARK 465 SER A 541 REMARK 465 THR A 542 REMARK 465 PHE A 543 REMARK 465 LEU A 544 REMARK 465 GLY A 545 REMARK 465 GLY A 546 REMARK 465 LEU A 547 REMARK 465 VAL A 548 REMARK 465 PRO A 549 REMARK 465 ARG A 550 REMARK 465 GLY A 551 REMARK 465 SER A 552 REMARK 465 HIS A 553 REMARK 465 HIS A 554 REMARK 465 HIS A 555 REMARK 465 HIS A 556 REMARK 465 HIS A 557 REMARK 465 HIS A 558 REMARK 465 SER A 559 REMARK 465 ALA A 560 REMARK 465 TRP A 561 REMARK 465 SER A 562 REMARK 465 HIS A 563 REMARK 465 PRO A 564 REMARK 465 GLN A 565 REMARK 465 PHE A 566 REMARK 465 GLU A 567 REMARK 465 LYS A 568 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 91 CD1 REMARK 470 LYS A 206 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 27 -76.70 -120.86 REMARK 500 ALA A 47 76.58 -163.67 REMARK 500 TYR A 53 99.68 -69.22 REMARK 500 ASN A 67 43.10 -98.45 REMARK 500 LYS A 70 48.80 -75.44 REMARK 500 THR A 72 75.46 -60.39 REMARK 500 VAL A 90 -49.69 -134.74 REMARK 500 LEU A 96 39.41 -80.13 REMARK 500 ALA A 102 25.55 -154.78 REMARK 500 SER A 103 -150.61 -102.33 REMARK 500 PHE A 104 72.07 56.64 REMARK 500 ASN A 169 -78.05 -59.35 REMARK 500 THR A 174 5.71 -150.55 REMARK 500 ASN A 175 -13.50 68.20 REMARK 500 SER A 186 85.65 -66.43 REMARK 500 HIS A 210 31.89 -86.93 REMARK 500 SER A 215 -72.07 -58.73 REMARK 500 ASN A 216 -151.13 -154.71 REMARK 500 LEU A 252 109.72 -170.29 REMARK 500 PRO A 265 64.42 -64.74 REMARK 500 CYS A 290 -88.64 -102.56 REMARK 500 GLU A 328 -113.04 53.38 REMARK 500 ASP A 338 84.66 -62.13 REMARK 500 ALA A 346 80.11 56.10 REMARK 500 SER A 362 -112.74 55.01 REMARK 500 ASN A 371 56.65 -98.66 REMARK 500 ASP A 378 21.99 -73.24 REMARK 500 THR A 384 -84.01 -109.98 REMARK 500 PHE A 387 55.75 -96.76 REMARK 500 THR A 408 -157.93 -110.93 REMARK 500 LYS A 419 21.71 -74.42 REMARK 500 ASP A 448 -36.55 -133.19 REMARK 500 TYR A 477 9.61 -68.27 REMARK 500 SER A 509 -18.64 -145.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5TDG RELATED DB: PDB DBREF 5TDL A 1 105 UNP P22167 FUS_BRSVC 1 105 DBREF 5TDL A 143 513 UNP P22167 FUS_BRSVC 143 513 DBREF 5TDL A 517 544 UNP P10104 WAC_BPT4 457 484 SEQADV 5TDL CYS A 98 UNP P22167 GLN 98 ENGINEERED MUTATION SEQADV 5TDL SER A 144 UNP P22167 ILE 144 ENGINEERED MUTATION SEQADV 5TDL CYS A 155 UNP P22167 SER 155 ENGINEERED MUTATION SEQADV 5TDL PHE A 190 UNP P22167 SER 190 ENGINEERED MUTATION SEQADV 5TDL LEU A 207 UNP P22167 VAL 207 ENGINEERED MUTATION SEQADV 5TDL CYS A 290 UNP P22167 SER 290 ENGINEERED MUTATION SEQADV 5TDL CYS A 361 UNP P22167 GLN 361 ENGINEERED MUTATION SEQADV 5TDL SER A 514 UNP P22167 LINKER SEQADV 5TDL ALA A 515 UNP P22167 LINKER SEQADV 5TDL ILE A 516 UNP P22167 LINKER SEQADV 5TDL GLY A 517 UNP P10104 ALA 457 LINKER SEQADV 5TDL LEU A 539 UNP P10104 PHE 479 VARIANT SEQADV 5TDL GLY A 545 UNP P10104 EXPRESSION TAG SEQADV 5TDL GLY A 546 UNP P10104 EXPRESSION TAG SEQADV 5TDL LEU A 547 UNP P10104 EXPRESSION TAG SEQADV 5TDL VAL A 548 UNP P10104 EXPRESSION TAG SEQADV 5TDL PRO A 549 UNP P10104 EXPRESSION TAG SEQADV 5TDL ARG A 550 UNP P10104 EXPRESSION TAG SEQADV 5TDL GLY A 551 UNP P10104 EXPRESSION TAG SEQADV 5TDL SER A 552 UNP P10104 EXPRESSION TAG SEQADV 5TDL HIS A 553 UNP P10104 EXPRESSION TAG SEQADV 5TDL HIS A 554 UNP P10104 EXPRESSION TAG SEQADV 5TDL HIS A 555 UNP P10104 EXPRESSION TAG SEQADV 5TDL HIS A 556 UNP P10104 EXPRESSION TAG SEQADV 5TDL HIS A 557 UNP P10104 EXPRESSION TAG SEQADV 5TDL HIS A 558 UNP P10104 EXPRESSION TAG SEQADV 5TDL SER A 559 UNP P10104 EXPRESSION TAG SEQADV 5TDL ALA A 560 UNP P10104 EXPRESSION TAG SEQADV 5TDL TRP A 561 UNP P10104 EXPRESSION TAG SEQADV 5TDL SER A 562 UNP P10104 EXPRESSION TAG SEQADV 5TDL HIS A 563 UNP P10104 EXPRESSION TAG SEQADV 5TDL PRO A 564 UNP P10104 EXPRESSION TAG SEQADV 5TDL GLN A 565 UNP P10104 EXPRESSION TAG SEQADV 5TDL PHE A 566 UNP P10104 EXPRESSION TAG SEQADV 5TDL GLU A 567 UNP P10104 EXPRESSION TAG SEQADV 5TDL LYS A 568 UNP P10104 EXPRESSION TAG SEQRES 1 A 531 MET ALA ALA THR ALA MET ARG MET ILE ILE SER ILE ILE SEQRES 2 A 531 PHE ILE SER THR TYR MET THR HIS ILE THR LEU CYS GLN SEQRES 3 A 531 ASN ILE THR GLU GLU PHE TYR GLN SER THR CYS SER ALA SEQRES 4 A 531 VAL SER ARG GLY TYR LEU SER ALA LEU ARG THR GLY TRP SEQRES 5 A 531 TYR THR SER VAL VAL THR ILE GLU LEU SER LYS ILE GLN SEQRES 6 A 531 LYS ASN VAL CYS LYS SER THR ASP SER LYS VAL LYS LEU SEQRES 7 A 531 ILE LYS GLN GLU LEU GLU ARG TYR ASN ASN ALA VAL ILE SEQRES 8 A 531 GLU LEU GLN SER LEU MET CYS ASN GLU PRO ALA SER PHE SEQRES 9 A 531 SER GLY SER GLY SER ALA ILE ALA SER GLY VAL ALA VAL SEQRES 10 A 531 CYS LYS VAL LEU HIS LEU GLU GLY GLU VAL ASN LYS ILE SEQRES 11 A 531 LYS ASN ALA LEU LEU SER THR ASN LYS ALA VAL VAL SER SEQRES 12 A 531 LEU SER ASN GLY VAL SER VAL LEU THR PHE LYS VAL LEU SEQRES 13 A 531 ASP LEU LYS ASN TYR ILE ASP LYS GLU LEU LEU PRO LYS SEQRES 14 A 531 LEU ASN ASN HIS ASP CYS ARG ILE SER ASN ILE GLU THR SEQRES 15 A 531 VAL ILE GLU PHE GLN GLN LYS ASN ASN ARG LEU LEU GLU SEQRES 16 A 531 ILE ALA ARG GLU PHE SER VAL ASN ALA GLY ILE THR THR SEQRES 17 A 531 PRO LEU SER THR TYR MET LEU THR ASN SER GLU LEU LEU SEQRES 18 A 531 SER LEU ILE ASN ASP MET PRO ILE THR ASN ASP GLN LYS SEQRES 19 A 531 LYS LEU MET SER SER ASN VAL GLN ILE VAL ARG GLN GLN SEQRES 20 A 531 SER TYR SER ILE MET CYS VAL VAL LYS GLU GLU VAL ILE SEQRES 21 A 531 ALA TYR VAL VAL GLN LEU PRO ILE TYR GLY VAL ILE ASP SEQRES 22 A 531 THR PRO CYS TRP LYS LEU HIS THR SER PRO LEU CYS THR SEQRES 23 A 531 THR ASP ASN LYS GLU GLY SER ASN ILE CYS LEU THR ARG SEQRES 24 A 531 THR ASP ARG GLY TRP TYR CYS ASP ASN ALA GLY SER VAL SEQRES 25 A 531 SER PHE PHE PRO GLN ALA GLU THR CYS LYS VAL CYS SER SEQRES 26 A 531 ASN ARG VAL PHE CYS ASP THR MET ASN SER LEU THR LEU SEQRES 27 A 531 PRO THR ASP VAL ASN LEU CYS ASN THR ASP ILE PHE ASN SEQRES 28 A 531 THR LYS TYR ASP CYS LYS ILE MET THR SER LYS THR ASP SEQRES 29 A 531 ILE SER SER SER VAL ILE THR SER ILE GLY ALA ILE VAL SEQRES 30 A 531 SER CYS TYR GLY LYS THR LYS CYS THR ALA SER ASN LYS SEQRES 31 A 531 ASN ARG GLY ILE ILE LYS THR PHE SER ASN GLY CYS ASP SEQRES 32 A 531 TYR VAL SER ASN LYS GLY VAL ASP THR VAL SER VAL GLY SEQRES 33 A 531 ASN THR LEU TYR TYR VAL ASN LYS LEU GLU GLY LYS ALA SEQRES 34 A 531 LEU TYR ILE LYS GLY GLU PRO ILE ILE ASN TYR TYR ASP SEQRES 35 A 531 PRO LEU VAL PHE PRO SER ASP GLU PHE ASP ALA SER ILE SEQRES 36 A 531 ALA GLN VAL ASN ALA LYS ILE ASN GLN SER LEU ALA PHE SEQRES 37 A 531 ILE ARG ARG SER ASP GLU LEU LEU SER ALA ILE GLY GLY SEQRES 38 A 531 TYR ILE PRO GLU ALA PRO ARG ASP GLY GLN ALA TYR VAL SEQRES 39 A 531 ARG LYS ASP GLY GLU TRP VAL LEU LEU SER THR PHE LEU SEQRES 40 A 531 GLY GLY LEU VAL PRO ARG GLY SER HIS HIS HIS HIS HIS SEQRES 41 A 531 HIS SER ALA TRP SER HIS PRO GLN PHE GLU LYS HET NAG A5001 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NAG C8 H15 N O6 HELIX 1 AA1 ASP A 73 LEU A 96 1 24 HELIX 2 AA2 MET A 97 ASN A 99 5 3 HELIX 3 AA3 ILE A 148 LEU A 158 1 11 HELIX 4 AA4 GLY A 162 ASN A 169 1 8 HELIX 5 AA5 ALA A 170 LEU A 172 5 3 HELIX 6 AA6 LEU A 195 ASP A 200 1 6 HELIX 7 AA7 LEU A 203 ASN A 209 1 7 HELIX 8 AA8 ILE A 217 SER A 238 1 22 HELIX 9 AA9 THR A 253 ASN A 262 1 10 HELIX 10 AB1 THR A 267 ASN A 277 1 11 HELIX 11 AB2 ASN A 277 GLN A 284 1 8 HELIX 12 AB3 LYS A 327 ASN A 331 5 5 HELIX 13 AB4 GLN A 354 CYS A 358 5 5 HELIX 14 AB5 MET A 370 SER A 372 5 3 HELIX 15 AB6 PRO A 376 THR A 384 5 9 HELIX 16 AB7 ILE A 492 ARG A 508 1 17 SHEET 1 AA1 6 LYS A 465 ILE A 469 0 SHEET 2 AA1 6 THR A 29 TYR A 33 1 N GLU A 30 O LEU A 467 SHEET 3 AA1 6 SER A 38 GLU A 60 -1 O SER A 38 N TYR A 33 SHEET 4 AA1 6 VAL A 296 THR A 318 -1 O ILE A 305 N GLY A 51 SHEET 5 AA1 6 SER A 287 LYS A 293 -1 N ILE A 288 O VAL A 300 SHEET 6 AA1 6 ILE A 243 THR A 244 -1 N THR A 244 O SER A 287 SHEET 1 AA2 5 LYS A 176 VAL A 179 0 SHEET 2 AA2 5 VAL A 187 ASP A 194 -1 O VAL A 187 N VAL A 179 SHEET 3 AA2 5 SER A 38 GLU A 60 1 N THR A 58 O PHE A 190 SHEET 4 AA2 5 ARG A 364 ASP A 368 1 O CYS A 367 N ARG A 49 SHEET 5 AA2 5 LYS A 359 CYS A 361 -1 N LYS A 359 O PHE A 366 SHEET 1 AA3 7 LYS A 359 CYS A 361 0 SHEET 2 AA3 7 ARG A 364 ASP A 368 -1 O PHE A 366 N LYS A 359 SHEET 3 AA3 7 SER A 38 GLU A 60 1 N ARG A 49 O CYS A 367 SHEET 4 AA3 7 VAL A 296 THR A 318 -1 O ILE A 305 N GLY A 51 SHEET 5 AA3 7 GLY A 340 ASN A 345 -1 O GLY A 340 N LEU A 316 SHEET 6 AA3 7 SER A 348 PHE A 352 -1 O PHE A 352 N TRP A 341 SHEET 7 AA3 7 LEU A 373 LEU A 375 -1 O LEU A 375 N VAL A 349 SHEET 1 AA4 4 LEU A 321 CYS A 322 0 SHEET 2 AA4 4 CYS A 333 ARG A 336 -1 O LEU A 334 N LEU A 321 SHEET 3 AA4 4 LYS A 394 SER A 398 -1 O MET A 396 N THR A 335 SHEET 4 AA4 4 ASP A 486 SER A 491 -1 O GLU A 487 N THR A 397 SHEET 1 AA5 3 SER A 404 ILE A 407 0 SHEET 2 AA5 3 GLY A 411 CYS A 416 -1 O SER A 415 N SER A 404 SHEET 3 AA5 3 GLY A 438 SER A 443 -1 O GLY A 438 N CYS A 416 SHEET 1 AA6 4 GLY A 430 THR A 434 0 SHEET 2 AA6 4 CYS A 422 ASN A 426 -1 N ASN A 426 O GLY A 430 SHEET 3 AA6 4 THR A 449 VAL A 452 -1 O SER A 451 N THR A 423 SHEET 4 AA6 4 THR A 455 TYR A 458 -1 O TYR A 457 N VAL A 450 SSBOND 1 CYS A 37 CYS A 439 1555 1555 2.03 SSBOND 2 CYS A 69 CYS A 212 1555 1555 2.04 SSBOND 3 CYS A 98 CYS A 361 1555 9555 2.03 SSBOND 4 CYS A 155 CYS A 290 1555 1555 2.03 SSBOND 5 CYS A 313 CYS A 343 1555 1555 2.04 SSBOND 6 CYS A 322 CYS A 333 1555 1555 2.03 SSBOND 7 CYS A 358 CYS A 367 1555 1555 2.03 SSBOND 8 CYS A 382 CYS A 393 1555 1555 2.03 SSBOND 9 CYS A 416 CYS A 422 1555 1555 2.04 LINK ND2 ASN A 500 C1 NAG A5001 1555 1555 1.45 CISPEP 1 ASN A 99 GLU A 100 0 0.02 CISPEP 2 THR A 245 PRO A 246 0 -2.20 CRYST1 172.072 172.072 172.072 90.00 90.00 90.00 P 41 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005812 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005812 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005812 0.00000