HEADER IMMUNE SYSTEM 23-SEP-16 5TEZ TITLE TCR F50 RECGONIZING M1-HLA-A2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLY-ILE-LEU-GLY-PHE-VAL-PHE-THR-LEU; COMPND 3 CHAIN: C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, A-2 ALPHA CHAIN; COMPND 7 CHAIN: A; COMPND 8 FRAGMENT: UNP RESIDUES 25-299; COMPND 9 SYNONYM: MHC CLASS I ANTIGEN A*2; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 13 CHAIN: B; COMPND 14 FRAGMENT: UNP RESIDUES 20-119; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: TCR F50 ALPHA CHAIN; COMPND 18 CHAIN: I; COMPND 19 ENGINEERED: YES; COMPND 20 MOL_ID: 5; COMPND 21 MOLECULE: TCR F50 BETA CHAIN; COMPND 22 CHAIN: J; COMPND 23 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 4 ORGANISM_TAXID: 11320; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_COMMON: HUMAN; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 GENE: HLA-A, HLAA; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 12 MOL_ID: 3; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 GENE: B2M, CDABP0092, HDCMA22P; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 19 MOL_ID: 4; SOURCE 20 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 21 ORGANISM_TAXID: 9606; SOURCE 22 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 24 MOL_ID: 5; SOURCE 25 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 26 ORGANISM_TAXID: 9606; SOURCE 27 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TCR FLU M1-HLA-A2, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR X.YANG,R.A.MARIUZZA REVDAT 5 04-OCT-23 5TEZ 1 REMARK REVDAT 4 11-DEC-19 5TEZ 1 REMARK REVDAT 3 22-NOV-17 5TEZ 1 JRNL REVDAT 2 04-OCT-17 5TEZ 1 JRNL REVDAT 1 27-SEP-17 5TEZ 0 JRNL AUTH X.YANG,G.CHEN,N.P.WENG,R.A.MARIUZZA JRNL TITL STRUCTURAL BASIS FOR CLONAL DIVERSITY OF THE HUMAN T-CELL JRNL TITL 2 RESPONSE TO A DOMINANT INFLUENZA VIRUS EPITOPE. JRNL REF J. BIOL. CHEM. V. 292 18618 2017 JRNL REFN ESSN 1083-351X JRNL PMID 28931605 JRNL DOI 10.1074/JBC.M117.810382 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 100314 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.990 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.9330 - 4.0957 0.99 7231 147 0.1511 0.1930 REMARK 3 2 4.0957 - 3.2514 0.98 7080 144 0.1585 0.1935 REMARK 3 3 3.2514 - 2.8406 0.99 7125 145 0.1789 0.2066 REMARK 3 4 2.8406 - 2.5809 0.98 7011 143 0.1970 0.2177 REMARK 3 5 2.5809 - 2.3960 0.99 7099 144 0.2040 0.2354 REMARK 3 6 2.3960 - 2.2547 0.99 7084 144 0.2117 0.2434 REMARK 3 7 2.2547 - 2.1418 0.98 6967 142 0.1984 0.2182 REMARK 3 8 2.1418 - 2.0486 0.98 6998 142 0.2038 0.2457 REMARK 3 9 2.0486 - 1.9697 0.98 7027 143 0.2151 0.2422 REMARK 3 10 1.9697 - 1.9018 0.98 6996 143 0.2286 0.2702 REMARK 3 11 1.9018 - 1.8423 0.99 7030 143 0.2344 0.2689 REMARK 3 12 1.8423 - 1.7896 0.97 6900 140 0.2555 0.3244 REMARK 3 13 1.7896 - 1.7425 0.97 6906 141 0.2771 0.3306 REMARK 3 14 1.7425 - 1.7000 0.96 6860 139 0.2949 0.3297 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.29 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.042 6845 REMARK 3 ANGLE : 1.637 9282 REMARK 3 CHIRALITY : 0.144 979 REMARK 3 PLANARITY : 0.008 1213 REMARK 3 DIHEDRAL : 15.067 2495 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5TEZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1000224127. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97945 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.17 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 136200 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.520 REMARK 200 RESOLUTION RANGE LOW (A) : 37.924 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.35100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 44.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 8.81200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1OGA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, 0.1 M IMIDAZOLE (PH 8.0), REMARK 280 AND 0.2 M SODIUM MALONATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.52650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, A, B, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY I 2 REMARK 465 GLU I 3 REMARK 465 PRO I 206 REMARK 465 GLU I 207 REMARK 465 SER I 208 REMARK 465 SER I 209 REMARK 465 GLU J 1 REMARK 465 ALA J 2 REMARK 465 ASP J 243 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLY C 1 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH J 375 O HOH J 461 1.94 REMARK 500 O HOH I 387 O HOH I 453 1.95 REMARK 500 OD2 ASP I 154 O HOH I 301 1.97 REMARK 500 NH1 ARG A 35 O HOH A 301 2.00 REMARK 500 O HOH A 352 O HOH A 510 2.01 REMARK 500 O HOH A 520 O HOH A 541 2.02 REMARK 500 O HOH B 206 O HOH B 212 2.02 REMARK 500 O HOH C 101 O HOH A 437 2.03 REMARK 500 NH2 ARG B 3 O HOH B 101 2.04 REMARK 500 OD1 ASN I 119 O HOH I 302 2.06 REMARK 500 O HOH A 424 O HOH A 529 2.06 REMARK 500 O HOH A 328 O HOH A 352 2.06 REMARK 500 O HOH J 464 O HOH J 500 2.07 REMARK 500 NH1 ARG A 75 O HOH A 302 2.08 REMARK 500 NZ LYS I 131 O HOH I 303 2.08 REMARK 500 O HOH J 312 O HOH J 448 2.09 REMARK 500 N GLY A 1 O HOH A 303 2.10 REMARK 500 O HOH B 141 O HOH B 209 2.10 REMARK 500 OD2 ASP I 156 NZ LYS I 183 2.11 REMARK 500 OD1 ASP I 154 O HOH I 304 2.12 REMARK 500 O HOH A 516 O HOH J 477 2.14 REMARK 500 NH2 ARG J 109 O HOH J 301 2.15 REMARK 500 O HOH J 466 O HOH J 496 2.15 REMARK 500 OE1 GLU A 58 O HOH A 304 2.16 REMARK 500 O HOH J 450 O HOH J 525 2.17 REMARK 500 O HOH J 351 O HOH J 363 2.17 REMARK 500 O HIS I 8 O HOH I 305 2.19 REMARK 500 O HOH B 102 O HOH B 201 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 528 O HOH I 377 1455 2.07 REMARK 500 O HOH B 194 O HOH I 453 1455 2.12 REMARK 500 O HOH A 454 O HOH I 471 28411 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL A 25 CB VAL A 25 CG2 -0.143 REMARK 500 TYR A 27 CE2 TYR A 27 CD2 -0.127 REMARK 500 TYR A 113 CD1 TYR A 113 CE1 -0.096 REMARK 500 ALA A 135 CA ALA A 135 CB -0.189 REMARK 500 LYS A 146 CB LYS A 146 CG -0.163 REMARK 500 GLU A 166 CD GLU A 166 OE2 -0.068 REMARK 500 THR A 228 CB THR A 228 CG2 -0.199 REMARK 500 VAL A 247 CB VAL A 247 CG1 -0.141 REMARK 500 GLU A 275 CB GLU A 275 CG -0.135 REMARK 500 GLU A 275 CG GLU A 275 CD -0.128 REMARK 500 GLU A 275 CD GLU A 275 OE2 -0.070 REMARK 500 VAL B 9 CB VAL B 9 CG2 -0.156 REMARK 500 PHE B 70 CD1 PHE B 70 CE1 -0.123 REMARK 500 GLU B 77 CG GLU B 77 CD -0.093 REMARK 500 TYR B 78 CD1 TYR B 78 CE1 -0.093 REMARK 500 VAL I 14 CB VAL I 14 CG1 -0.196 REMARK 500 GLU I 16 CB GLU I 16 CG -0.115 REMARK 500 VAL I 65 CB VAL I 65 CG2 -0.133 REMARK 500 VAL I 137 CB VAL I 137 CG2 -0.131 REMARK 500 SER I 155 CB SER I 155 OG -0.104 REMARK 500 CYS I 163 CB CYS I 163 SG -0.116 REMARK 500 VAL I 164 CB VAL I 164 CG2 -0.140 REMARK 500 LYS I 183 CG LYS I 183 CD -0.213 REMARK 500 VAL J 21 CB VAL J 21 CG2 -0.139 REMARK 500 ARG J 36 CB ARG J 36 CG -0.292 REMARK 500 TYR J 48 CE2 TYR J 48 CD2 -0.098 REMARK 500 SER J 67 CB SER J 67 OG -0.085 REMARK 500 SER J 130 CB SER J 130 OG -0.082 REMARK 500 TRP J 239 CE3 TRP J 239 CZ3 -0.117 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 81 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG B 81 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG I 62 NE - CZ - NH1 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG I 62 NE - CZ - NH2 ANGL. DEV. = -5.5 DEGREES REMARK 500 CYS I 163 CA - CB - SG ANGL. DEV. = 7.6 DEGREES REMARK 500 LYS I 183 CD - CE - NZ ANGL. DEV. = -14.0 DEGREES REMARK 500 ARG J 36 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 LEU J 176 CA - CB - CG ANGL. DEV. = 17.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 29 -129.85 51.27 REMARK 500 SER A 195 -149.90 53.48 REMARK 500 HIS A 197 35.36 -146.64 REMARK 500 TRP B 60 -4.09 82.43 REMARK 500 GLN I 61 -113.26 59.42 REMARK 500 ALA I 87 171.26 179.67 REMARK 500 PHE J 74 74.80 -152.69 REMARK 500 SER J 87 -178.70 -174.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI DBREF 5TEZ C 1 9 PDB 5TEZ 5TEZ 1 9 DBREF 5TEZ A 1 275 UNP P01892 1A02_HUMAN 25 299 DBREF 5TEZ B 0 99 UNP P61769 B2MG_HUMAN 20 119 DBREF 5TEZ I 2 209 PDB 5TEZ 5TEZ 2 209 DBREF 5TEZ J 1 243 PDB 5TEZ 5TEZ 1 243 SEQRES 1 C 9 GLY ILE LEU GLY PHE VAL PHE THR LEU SEQRES 1 A 275 GLY SER HIS SER MET ARG TYR PHE PHE THR SER VAL SER SEQRES 2 A 275 ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE ALA VAL GLY SEQRES 3 A 275 TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP SER ASP SEQRES 4 A 275 ALA ALA SER GLN ARG MET GLU PRO ARG ALA PRO TRP ILE SEQRES 5 A 275 GLU GLN GLU GLY PRO GLU TYR TRP ASP GLY GLU THR ARG SEQRES 6 A 275 LYS VAL LYS ALA HIS SER GLN THR HIS ARG VAL ASP LEU SEQRES 7 A 275 GLY THR LEU ARG GLY TYR TYR ASN GLN SER GLU ALA GLY SEQRES 8 A 275 SER HIS THR VAL GLN ARG MET TYR GLY CYS ASP VAL GLY SEQRES 9 A 275 SER ASP TRP ARG PHE LEU ARG GLY TYR HIS GLN TYR ALA SEQRES 10 A 275 TYR ASP GLY LYS ASP TYR ILE ALA LEU LYS GLU ASP LEU SEQRES 11 A 275 ARG SER TRP THR ALA ALA ASP MET ALA ALA GLN THR THR SEQRES 12 A 275 LYS HIS LYS TRP GLU ALA ALA HIS VAL ALA GLU GLN LEU SEQRES 13 A 275 ARG ALA TYR LEU GLU GLY THR CYS VAL GLU TRP LEU ARG SEQRES 14 A 275 ARG TYR LEU GLU ASN GLY LYS GLU THR LEU GLN ARG THR SEQRES 15 A 275 ASP ALA PRO LYS THR HIS MET THR HIS HIS ALA VAL SER SEQRES 16 A 275 ASP HIS GLU ALA THR LEU ARG CYS TRP ALA LEU SER PHE SEQRES 17 A 275 TYR PRO ALA GLU ILE THR LEU THR TRP GLN ARG ASP GLY SEQRES 18 A 275 GLU ASP GLN THR GLN ASP THR GLU LEU VAL GLU THR ARG SEQRES 19 A 275 PRO ALA GLY ASP GLY THR PHE GLN LYS TRP ALA ALA VAL SEQRES 20 A 275 VAL VAL PRO SER GLY GLN GLU GLN ARG TYR THR CYS HIS SEQRES 21 A 275 VAL GLN HIS GLU GLY LEU PRO LYS PRO LEU THR LEU ARG SEQRES 22 A 275 TRP GLU SEQRES 1 B 100 ALA ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 B 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 B 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 B 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 B 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 B 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 B 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 B 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 I 208 GLY GLU ASN VAL GLU GLN HIS PRO SER THR LEU SER VAL SEQRES 2 I 208 GLN GLU GLY ASP SER ALA VAL ILE LYS CYS THR TYR SER SEQRES 3 I 208 ASP SER ALA SER ASN TYR PHE PRO TRP TYR LYS GLN GLU SEQRES 4 I 208 LEU GLY LYS ARG PRO GLN LEU ILE ILE ASP ILE ARG SER SEQRES 5 I 208 ASN VAL GLY GLU LYS LYS ASP GLN ARG ILE ALA VAL THR SEQRES 6 I 208 LEU ASN LYS THR ALA LYS HIS PHE SER LEU HIS ILE THR SEQRES 7 I 208 GLU THR GLN PRO GLU ASP SER ALA VAL TYR PHE CYS ALA SEQRES 8 I 208 ALA SER PHE ILE ILE GLN GLY ALA GLN LYS LEU VAL PHE SEQRES 9 I 208 GLY GLN GLY THR ARG LEU THR ILE ASN PRO ASN ILE GLN SEQRES 10 I 208 ASN PRO ASP PRO ALA VAL TYR GLN LEU ARG ASP SER LYS SEQRES 11 I 208 SER SER ASP LYS SER VAL CYS LEU PHE THR ASP PHE ASP SEQRES 12 I 208 SER GLN THR ASN VAL SER GLN SER LYS ASP SER ASP VAL SEQRES 13 I 208 TYR ILE THR ASP LYS CYS VAL LEU ASP MET ARG SER MET SEQRES 14 I 208 ASP PHE LYS SER ASN SER ALA VAL ALA TRP SER ASN LYS SEQRES 15 I 208 SER ASP PHE ALA CYS ALA ASN ALA PHE ASN ASN SER ILE SEQRES 16 I 208 ILE PRO GLU ASP THR PHE PHE PRO SER PRO GLU SER SER SEQRES 1 J 243 GLU ALA GLN VAL THR GLN ASN PRO ARG TYR LEU ILE THR SEQRES 2 J 243 VAL THR GLY LYS LYS LEU THR VAL THR CYS SER GLN ASN SEQRES 3 J 243 MET ASN HIS GLU TYR MET SER TRP TYR ARG GLN ASP PRO SEQRES 4 J 243 GLY LEU GLY LEU ARG GLN ILE TYR TYR SER MET ASN VAL SEQRES 5 J 243 GLU VAL THR ASP LYS GLY ASP VAL PRO GLU GLY TYR LYS SEQRES 6 J 243 VAL SER ARG LYS GLU LYS ARG ASN PHE PRO LEU ILE LEU SEQRES 7 J 243 GLU SER PRO SER PRO ASN GLN THR SER LEU TYR PHE CYS SEQRES 8 J 243 ALA SER SER LEU LEU GLY GLY TRP SER GLU ALA PHE PHE SEQRES 9 J 243 GLY GLN GLY THR ARG LEU THR VAL THR GLU ASP LEU LYS SEQRES 10 J 243 ASN VAL PHE PRO PRO GLU VAL ALA VAL PHE GLU PRO SER SEQRES 11 J 243 GLU ALA GLU ILE SER HIS THR GLN LYS ALA THR LEU VAL SEQRES 12 J 243 CYS LEU ALA THR GLY PHE TYR PRO ASP HIS VAL GLU LEU SEQRES 13 J 243 SER TRP TRP VAL ASN GLY LYS GLU VAL HIS SER GLY VAL SEQRES 14 J 243 CYS THR ASP PRO GLN PRO LEU LYS GLU GLN PRO ALA LEU SEQRES 15 J 243 ASN ASP SER ARG TYR ALA LEU SER SER ARG LEU ARG VAL SEQRES 16 J 243 SER ALA THR PHE TRP GLN ASN PRO ARG ASN HIS PHE ARG SEQRES 17 J 243 CYS GLN VAL GLN PHE TYR GLY LEU SER GLU ASN ASP GLU SEQRES 18 J 243 TRP THR GLN ASP ARG ALA LYS PRO VAL THR GLN ILE VAL SEQRES 19 J 243 SER ALA GLU ALA TRP GLY ARG ALA ASP FORMUL 6 HOH *805(H2 O) HELIX 1 AA1 ALA A 49 GLU A 53 5 5 HELIX 2 AA2 GLY A 56 TYR A 85 1 30 HELIX 3 AA3 ASP A 137 ALA A 139 5 3 HELIX 4 AA4 ALA A 140 ALA A 150 1 11 HELIX 5 AA5 HIS A 151 GLY A 162 1 12 HELIX 6 AA6 GLY A 162 GLY A 175 1 14 HELIX 7 AA7 GLY A 175 GLN A 180 1 6 HELIX 8 AA8 GLN A 253 GLN A 255 5 3 HELIX 9 AA9 GLN I 82 SER I 86 5 5 HELIX 10 AB1 ARG I 168 ASP I 171 5 4 HELIX 11 AB2 ALA I 187 ALA I 191 5 5 HELIX 12 AB3 SER J 82 THR J 86 5 5 HELIX 13 AB4 ASP J 115 VAL J 119 5 5 HELIX 14 AB5 SER J 130 GLN J 138 1 9 HELIX 15 AB6 ALA J 197 GLN J 201 1 5 SHEET 1 AA1 8 GLU A 46 PRO A 47 0 SHEET 2 AA1 8 THR A 31 ASP A 37 -1 N ARG A 35 O GLU A 46 SHEET 3 AA1 8 ARG A 21 VAL A 28 -1 N GLY A 26 O PHE A 33 SHEET 4 AA1 8 HIS A 3 VAL A 12 -1 N ARG A 6 O TYR A 27 SHEET 5 AA1 8 THR A 94 VAL A 103 -1 O VAL A 95 N SER A 11 SHEET 6 AA1 8 PHE A 109 TYR A 118 -1 O ARG A 111 N ASP A 102 SHEET 7 AA1 8 LYS A 121 LEU A 126 -1 O ILE A 124 N TYR A 116 SHEET 8 AA1 8 TRP A 133 THR A 134 -1 O THR A 134 N ALA A 125 SHEET 1 AA2 4 LYS A 186 VAL A 194 0 SHEET 2 AA2 4 GLU A 198 PHE A 208 -1 O GLU A 198 N VAL A 194 SHEET 3 AA2 4 PHE A 241 PRO A 250 -1 O VAL A 249 N ALA A 199 SHEET 4 AA2 4 THR A 228 LEU A 230 -1 N GLU A 229 O ALA A 246 SHEET 1 AA3 4 LYS A 186 VAL A 194 0 SHEET 2 AA3 4 GLU A 198 PHE A 208 -1 O GLU A 198 N VAL A 194 SHEET 3 AA3 4 PHE A 241 PRO A 250 -1 O VAL A 249 N ALA A 199 SHEET 4 AA3 4 ARG A 234 PRO A 235 -1 N ARG A 234 O GLN A 242 SHEET 1 AA4 4 GLU A 222 GLN A 224 0 SHEET 2 AA4 4 THR A 214 ARG A 219 -1 N ARG A 219 O GLU A 222 SHEET 3 AA4 4 TYR A 257 GLN A 262 -1 O HIS A 260 N THR A 216 SHEET 4 AA4 4 LEU A 270 LEU A 272 -1 O LEU A 272 N CYS A 259 SHEET 1 AA5 4 LYS B 6 SER B 11 0 SHEET 2 AA5 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA5 4 PHE B 62 PHE B 70 -1 O THR B 68 N LEU B 23 SHEET 4 AA5 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 AA6 4 LYS B 6 SER B 11 0 SHEET 2 AA6 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA6 4 PHE B 62 PHE B 70 -1 O THR B 68 N LEU B 23 SHEET 4 AA6 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 AA7 4 GLU B 44 ARG B 45 0 SHEET 2 AA7 4 GLU B 36 LYS B 41 -1 N LYS B 41 O GLU B 44 SHEET 3 AA7 4 TYR B 78 ASN B 83 -1 O ALA B 79 N LEU B 40 SHEET 4 AA7 4 LYS B 91 LYS B 94 -1 O VAL B 93 N CYS B 80 SHEET 1 AA8 5 VAL I 5 HIS I 8 0 SHEET 2 AA8 5 ALA I 20 TYR I 26 -1 O THR I 25 N GLU I 6 SHEET 3 AA8 5 HIS I 73 ILE I 78 -1 O PHE I 74 N CYS I 24 SHEET 4 AA8 5 ILE I 63 ASN I 68 -1 N ALA I 64 O HIS I 77 SHEET 5 AA8 5 GLU I 57 ASP I 60 -1 N ASP I 60 O ILE I 63 SHEET 1 AA9 5 THR I 11 GLN I 15 0 SHEET 2 AA9 5 THR I 109 ASN I 114 1 O THR I 112 N LEU I 12 SHEET 3 AA9 5 ALA I 87 ILE I 97 -1 N ALA I 87 O LEU I 111 SHEET 4 AA9 5 TYR I 33 GLN I 39 -1 N GLN I 39 O VAL I 88 SHEET 5 AA9 5 GLN I 46 ARG I 52 -1 O GLN I 46 N LYS I 38 SHEET 1 AB1 4 THR I 11 GLN I 15 0 SHEET 2 AB1 4 THR I 109 ASN I 114 1 O THR I 112 N LEU I 12 SHEET 3 AB1 4 ALA I 87 ILE I 97 -1 N ALA I 87 O LEU I 111 SHEET 4 AB1 4 ALA I 100 PHE I 105 -1 O ALA I 100 N ILE I 97 SHEET 1 AB2 4 ALA I 123 ARG I 128 0 SHEET 2 AB2 4 SER I 136 THR I 141 -1 O VAL I 137 N LEU I 127 SHEET 3 AB2 4 PHE I 172 SER I 181 -1 O ALA I 179 N CYS I 138 SHEET 4 AB2 4 VAL I 157 ILE I 159 -1 N TYR I 158 O TRP I 180 SHEET 1 AB3 4 ALA I 123 ARG I 128 0 SHEET 2 AB3 4 SER I 136 THR I 141 -1 O VAL I 137 N LEU I 127 SHEET 3 AB3 4 PHE I 172 SER I 181 -1 O ALA I 179 N CYS I 138 SHEET 4 AB3 4 CYS I 163 MET I 167 -1 N MET I 167 O PHE I 172 SHEET 1 AB4 4 VAL J 4 ASN J 7 0 SHEET 2 AB4 4 LEU J 19 GLN J 25 -1 O SER J 24 N THR J 5 SHEET 3 AB4 4 LEU J 76 LEU J 78 -1 O LEU J 76 N VAL J 21 SHEET 4 AB4 4 LYS J 65 VAL J 66 -1 N LYS J 65 O ILE J 77 SHEET 1 AB5 6 TYR J 10 VAL J 14 0 SHEET 2 AB5 6 THR J 108 THR J 113 1 O THR J 113 N THR J 13 SHEET 3 AB5 6 SER J 87 SER J 94 -1 N TYR J 89 O THR J 108 SHEET 4 AB5 6 TYR J 31 ASP J 38 -1 N TYR J 35 O PHE J 90 SHEET 5 AB5 6 GLY J 42 ASN J 51 -1 O ILE J 46 N TRP J 34 SHEET 6 AB5 6 VAL J 54 LYS J 57 -1 O ASP J 56 N TYR J 48 SHEET 1 AB6 4 TYR J 10 VAL J 14 0 SHEET 2 AB6 4 THR J 108 THR J 113 1 O THR J 113 N THR J 13 SHEET 3 AB6 4 SER J 87 SER J 94 -1 N TYR J 89 O THR J 108 SHEET 4 AB6 4 PHE J 103 PHE J 104 -1 O PHE J 103 N SER J 93 SHEET 1 AB7 4 GLU J 123 PHE J 127 0 SHEET 2 AB7 4 LYS J 139 PHE J 149 -1 O VAL J 143 N PHE J 127 SHEET 3 AB7 4 TYR J 187 SER J 196 -1 O SER J 191 N CYS J 144 SHEET 4 AB7 4 VAL J 169 THR J 171 -1 N CYS J 170 O ARG J 192 SHEET 1 AB8 4 GLU J 123 PHE J 127 0 SHEET 2 AB8 4 LYS J 139 PHE J 149 -1 O VAL J 143 N PHE J 127 SHEET 3 AB8 4 TYR J 187 SER J 196 -1 O SER J 191 N CYS J 144 SHEET 4 AB8 4 LEU J 176 LYS J 177 -1 N LEU J 176 O ALA J 188 SHEET 1 AB9 4 LYS J 163 VAL J 165 0 SHEET 2 AB9 4 VAL J 154 VAL J 160 -1 N VAL J 160 O LYS J 163 SHEET 3 AB9 4 HIS J 206 PHE J 213 -1 O GLN J 210 N SER J 157 SHEET 4 AB9 4 GLN J 232 TRP J 239 -1 O GLN J 232 N PHE J 213 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.07 SSBOND 2 CYS A 203 CYS A 259 1555 1555 2.06 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.01 SSBOND 4 CYS I 24 CYS I 91 1555 1555 2.03 SSBOND 5 CYS I 138 CYS I 188 1555 1555 2.05 SSBOND 6 CYS I 163 CYS J 170 1555 1555 2.49 SSBOND 7 CYS J 23 CYS J 91 1555 1555 2.01 SSBOND 8 CYS J 144 CYS J 209 1555 1555 2.01 CISPEP 1 TYR A 209 PRO A 210 0 -3.70 CISPEP 2 HIS B 31 PRO B 32 0 -2.93 CISPEP 3 HIS I 8 PRO I 9 0 3.31 CISPEP 4 ASN J 7 PRO J 8 0 -0.91 CISPEP 5 TYR J 150 PRO J 151 0 0.69 CRYST1 66.266 71.053 100.693 90.00 96.22 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015091 0.000000 0.001644 0.00000 SCALE2 0.000000 0.014074 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009990 0.00000