HEADER VIRAL PROTEIN 26-SEP-16 5TFO TITLE CRYSTAL STRUCTURE OF THE ZIKA VIRUS NS2B-NS3 PROTEASE WITH A DELETION TITLE 2 V76-L86 IN NS2B COMPND MOL_ID: 1; COMPND 2 MOLECULE: NS2B-NS3 PROTEASE CHIMERA,NS2B-NS3 PROTEASE,NS2B-NS3 COMPND 3 PROTEASE CHIMERA; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 OTHER_DETAILS: RESIDUES V76-L86 OF NS2B WERE SUBSTITUTED WITH GG COMPND 8 CHAINS A AND B WERE EXPRESSED AS A SINGLE POLYPEPTIDE CHAIN. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZIKA VIRUS; SOURCE 3 ORGANISM_COMMON: ZIKV; SOURCE 4 ORGANISM_TAXID: 64320; SOURCE 5 STRAIN: MR 766; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX6P KEYWDS FLAVIVIRUS, SERINE PROTEASE, ZIKA VIRUS, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.E.ALESHIN,L.BANKSTON,R.C.LIDDINGTON REVDAT 2 04-OCT-23 5TFO 1 REMARK REVDAT 1 25-OCT-17 5TFO 0 JRNL AUTH A.E.ALESHIN,L.BANKSTON,S.A.SHIRYAEV,A.TERSKIKH,A.STRONGIN, JRNL AUTH 2 R.C.LIDDINGTON JRNL TITL A NOVEL CONFORMATION FOR THE ZIKA VIRUS NS2B-NS3 PROTEASE JRNL TITL 2 OFFERS NEW INSIGHTS INTO BIOLOGICAL REGULATION AND INHIBITOR JRNL TITL 3 DESIGN. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 13874 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 711 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.5711 - 4.2883 1.00 2866 160 0.1784 0.2098 REMARK 3 2 4.2883 - 3.4044 1.00 2691 155 0.2055 0.2500 REMARK 3 3 3.4044 - 2.9743 1.00 2662 140 0.2711 0.2836 REMARK 3 4 2.9743 - 2.7024 0.99 2599 135 0.3108 0.3447 REMARK 3 5 2.7024 - 2.5087 0.90 2345 121 0.3635 0.4050 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 89.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2495 REMARK 3 ANGLE : 0.493 3382 REMARK 3 CHIRALITY : 0.046 367 REMARK 3 PLANARITY : 0.002 436 REMARK 3 DIHEDRAL : 18.011 1448 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 50:68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.1907 -1.3293 -21.9267 REMARK 3 T TENSOR REMARK 3 T11: 0.4852 T22: 0.6195 REMARK 3 T33: 0.6546 T12: 0.0616 REMARK 3 T13: 0.1983 T23: 0.0276 REMARK 3 L TENSOR REMARK 3 L11: 3.0783 L22: 6.1080 REMARK 3 L33: 5.2207 L12: 2.5538 REMARK 3 L13: 2.5335 L23: 0.6231 REMARK 3 S TENSOR REMARK 3 S11: 0.0361 S12: -0.3402 S13: 0.0012 REMARK 3 S21: 0.2201 S22: -0.0660 S23: 0.0629 REMARK 3 S31: 0.5167 S32: 0.2629 S33: -0.0768 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 1016:1052 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.3568 -1.6465 -28.7002 REMARK 3 T TENSOR REMARK 3 T11: 0.3410 T22: 0.5023 REMARK 3 T33: 0.5484 T12: -0.0788 REMARK 3 T13: 0.0018 T23: 0.0183 REMARK 3 L TENSOR REMARK 3 L11: 8.9637 L22: 5.9650 REMARK 3 L33: 5.9506 L12: -0.6543 REMARK 3 L13: 0.5678 L23: 1.5701 REMARK 3 S TENSOR REMARK 3 S11: 0.2048 S12: 0.0597 S13: -0.5585 REMARK 3 S21: 0.1962 S22: -0.0984 S23: 0.2497 REMARK 3 S31: 0.9094 S32: -0.4721 S33: -0.0014 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 1053:1103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.9786 6.3025 -24.9857 REMARK 3 T TENSOR REMARK 3 T11: 0.3759 T22: 0.5718 REMARK 3 T33: 0.5475 T12: -0.0337 REMARK 3 T13: 0.0859 T23: -0.0257 REMARK 3 L TENSOR REMARK 3 L11: 6.3517 L22: 3.3647 REMARK 3 L33: 3.7888 L12: 0.4384 REMARK 3 L13: 1.1798 L23: 0.9700 REMARK 3 S TENSOR REMARK 3 S11: 0.0606 S12: -0.5868 S13: -0.0978 REMARK 3 S21: 0.2533 S22: -0.1021 S23: 0.5944 REMARK 3 S31: 0.2842 S32: -0.3803 S33: 0.0320 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 1104:1118 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.1377 10.1321 -24.9159 REMARK 3 T TENSOR REMARK 3 T11: 0.2689 T22: 0.6626 REMARK 3 T33: 0.4639 T12: 0.0850 REMARK 3 T13: 0.0421 T23: -0.0853 REMARK 3 L TENSOR REMARK 3 L11: 6.1420 L22: 7.9267 REMARK 3 L33: 6.7832 L12: 5.6031 REMARK 3 L13: -0.1510 L23: 0.8076 REMARK 3 S TENSOR REMARK 3 S11: 0.1617 S12: -0.0728 S13: -0.2271 REMARK 3 S21: -0.1382 S22: 0.1796 S23: -0.2110 REMARK 3 S31: 0.0171 S32: 0.8621 S33: -0.4495 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 1119:1158 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.1740 12.5078 -23.8600 REMARK 3 T TENSOR REMARK 3 T11: 0.2068 T22: 0.5984 REMARK 3 T33: 0.5554 T12: -0.0121 REMARK 3 T13: 0.0117 T23: -0.0602 REMARK 3 L TENSOR REMARK 3 L11: 4.4710 L22: 8.5144 REMARK 3 L33: 8.0911 L12: 2.1192 REMARK 3 L13: -0.4976 L23: 0.2827 REMARK 3 S TENSOR REMARK 3 S11: 0.0976 S12: -0.3301 S13: 0.6480 REMARK 3 S21: 0.0682 S22: -0.0820 S23: 0.2611 REMARK 3 S31: -0.3743 S32: -0.2939 S33: -0.0199 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN B AND RESID 49:64 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.0038 5.1296 -55.2043 REMARK 3 T TENSOR REMARK 3 T11: 0.9277 T22: 0.8605 REMARK 3 T33: 0.7731 T12: -0.0115 REMARK 3 T13: 0.1090 T23: 0.0378 REMARK 3 L TENSOR REMARK 3 L11: 3.6922 L22: 4.8664 REMARK 3 L33: 8.8221 L12: -2.3584 REMARK 3 L13: -1.3578 L23: 6.1814 REMARK 3 S TENSOR REMARK 3 S11: 0.6317 S12: -0.4556 S13: 0.4453 REMARK 3 S21: -1.7993 S22: 0.5240 S23: -0.4990 REMARK 3 S31: -1.0526 S32: 1.2612 S33: -1.0072 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN B AND RESID 1016:1055 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.3298 7.3141 -49.4094 REMARK 3 T TENSOR REMARK 3 T11: 0.6530 T22: 0.7322 REMARK 3 T33: 0.6611 T12: 0.1704 REMARK 3 T13: -0.0099 T23: -0.0200 REMARK 3 L TENSOR REMARK 3 L11: 4.3523 L22: 6.9530 REMARK 3 L33: 8.3048 L12: 0.6753 REMARK 3 L13: 0.4295 L23: 5.5964 REMARK 3 S TENSOR REMARK 3 S11: 0.0527 S12: 0.0101 S13: 0.5061 REMARK 3 S21: -0.6251 S22: 0.0337 S23: 0.4361 REMARK 3 S31: -0.6296 S32: 0.1697 S33: -0.0004 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN B AND RESID 1056:1113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.9706 -0.4755 -54.1033 REMARK 3 T TENSOR REMARK 3 T11: 0.8887 T22: 0.7714 REMARK 3 T33: 0.5109 T12: 0.0803 REMARK 3 T13: -0.1280 T23: -0.0509 REMARK 3 L TENSOR REMARK 3 L11: 5.4196 L22: 6.4687 REMARK 3 L33: 6.4355 L12: -2.0814 REMARK 3 L13: -1.0752 L23: 2.2973 REMARK 3 S TENSOR REMARK 3 S11: 0.1239 S12: 0.1344 S13: -0.4414 REMARK 3 S21: -0.7283 S22: -0.1325 S23: 0.6045 REMARK 3 S31: 0.4364 S32: -0.1610 S33: 0.0986 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN B AND RESID 1114:1119 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.2025 -20.7301 -49.3694 REMARK 3 T TENSOR REMARK 3 T11: 1.1242 T22: 1.1982 REMARK 3 T33: 1.6664 T12: -0.1414 REMARK 3 T13: 0.0592 T23: -0.0393 REMARK 3 L TENSOR REMARK 3 L11: 5.9261 L22: 5.8013 REMARK 3 L33: 7.0984 L12: 5.1038 REMARK 3 L13: 2.2387 L23: -1.0333 REMARK 3 S TENSOR REMARK 3 S11: 0.9902 S12: 0.8703 S13: 0.9678 REMARK 3 S21: 0.9404 S22: 0.6358 S23: 2.3886 REMARK 3 S31: -0.6125 S32: -0.7155 S33: -1.8319 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN B AND RESID 1120:1157 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.4572 -8.8295 -54.0353 REMARK 3 T TENSOR REMARK 3 T11: 1.1243 T22: 0.6745 REMARK 3 T33: 0.6620 T12: 0.2028 REMARK 3 T13: -0.1287 T23: -0.1138 REMARK 3 L TENSOR REMARK 3 L11: 5.1395 L22: 7.3582 REMARK 3 L33: 7.8684 L12: 0.8451 REMARK 3 L13: 0.4737 L23: 2.6151 REMARK 3 S TENSOR REMARK 3 S11: 0.2614 S12: -0.1128 S13: -0.6547 REMARK 3 S21: -0.5505 S22: -0.4029 S23: 0.6703 REMARK 3 S31: 1.5962 S32: -0.3362 S33: -0.0724 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5TFO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1000224160. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13989 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.510 REMARK 200 RESOLUTION RANGE LOW (A) : 39.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.51 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.71400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2IJO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.6 MM PROTEIN, IN 100 MM NACL, 1.0 MM REMARK 280 TCEP, 20 MM TRIS-CL BUFFER (PH 8.0) WAS MIXED WITH THE WELL REMARK 280 SOLUTION (25% PEG3330, 200 MM NACL AND 100 MM BISTRIS PH 6.5), REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 125.38600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 27.59900 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 27.59900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.69300 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 27.59900 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 27.59900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 188.07900 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 27.59900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 27.59900 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 62.69300 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 27.59900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 27.59900 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 188.07900 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 125.38600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 46 REMARK 465 SER A 47 REMARK 465 SER A 48 REMARK 465 VAL A 49 REMARK 465 GLY A 69 REMARK 465 ASN A 70 REMARK 465 SER A 71 REMARK 465 PRO A 72 REMARK 465 ARG A 73 REMARK 465 LEU A 74 REMARK 465 ASP A 75 REMARK 465 GLY A 76 REMARK 465 GLY A 77 REMARK 465 VAL A 78 REMARK 465 GLU A 79 REMARK 465 ASP A 80 REMARK 465 ASP A 81 REMARK 465 GLY A 82 REMARK 465 PRO A 83 REMARK 465 PRO A 84 REMARK 465 MET A 85 REMARK 465 ALA A 86 REMARK 465 GLY A 87 REMARK 465 GLY A 88 REMARK 465 GLY A 89 REMARK 465 GLY A 90 REMARK 465 SER A 91 REMARK 465 GLY A 92 REMARK 465 GLY A 93 REMARK 465 GLY A 94 REMARK 465 GLY A 95 REMARK 465 SER A 1001 REMARK 465 GLY A 1002 REMARK 465 ALA A 1003 REMARK 465 LEU A 1004 REMARK 465 TRP A 1005 REMARK 465 ASP A 1006 REMARK 465 VAL A 1007 REMARK 465 PRO A 1008 REMARK 465 ALA A 1009 REMARK 465 PRO A 1010 REMARK 465 LYS A 1011 REMARK 465 GLU A 1012 REMARK 465 VAL A 1013 REMARK 465 LYS A 1014 REMARK 465 LYS A 1015 REMARK 465 GLY A 1159 REMARK 465 SER A 1160 REMARK 465 TYR A 1161 REMARK 465 VAL A 1162 REMARK 465 SER A 1163 REMARK 465 ALA A 1164 REMARK 465 ILE A 1165 REMARK 465 THR A 1166 REMARK 465 GLN A 1167 REMARK 465 GLY A 1168 REMARK 465 ARG A 1169 REMARK 465 ARG A 1170 REMARK 465 GLU A 1171 REMARK 465 GLU A 1172 REMARK 465 GLU A 1173 REMARK 465 THR A 1174 REMARK 465 PRO A 1175 REMARK 465 VAL A 1176 REMARK 465 GLU A 1177 REMARK 465 CYS A 1178 REMARK 465 PHE A 1179 REMARK 465 GLU A 1180 REMARK 465 PRO A 1181 REMARK 465 SER A 1182 REMARK 465 GLY B 46 REMARK 465 SER B 47 REMARK 465 SER B 48 REMARK 465 ALA B 65 REMARK 465 GLU B 66 REMARK 465 VAL B 67 REMARK 465 THR B 68 REMARK 465 GLY B 69 REMARK 465 ASN B 70 REMARK 465 SER B 71 REMARK 465 PRO B 72 REMARK 465 ARG B 73 REMARK 465 LEU B 74 REMARK 465 ASP B 75 REMARK 465 GLY B 76 REMARK 465 GLY B 77 REMARK 465 VAL B 78 REMARK 465 GLU B 79 REMARK 465 ASP B 80 REMARK 465 ASP B 81 REMARK 465 GLY B 82 REMARK 465 PRO B 83 REMARK 465 PRO B 84 REMARK 465 MET B 85 REMARK 465 ALA B 86 REMARK 465 GLY B 87 REMARK 465 GLY B 88 REMARK 465 GLY B 89 REMARK 465 GLY B 90 REMARK 465 SER B 91 REMARK 465 GLY B 92 REMARK 465 GLY B 93 REMARK 465 GLY B 94 REMARK 465 GLY B 95 REMARK 465 SER B 1001 REMARK 465 GLY B 1002 REMARK 465 ALA B 1003 REMARK 465 LEU B 1004 REMARK 465 TRP B 1005 REMARK 465 ASP B 1006 REMARK 465 VAL B 1007 REMARK 465 PRO B 1008 REMARK 465 ALA B 1009 REMARK 465 PRO B 1010 REMARK 465 LYS B 1011 REMARK 465 GLU B 1012 REMARK 465 VAL B 1013 REMARK 465 LYS B 1014 REMARK 465 LYS B 1015 REMARK 465 ASN B 1158 REMARK 465 GLY B 1159 REMARK 465 SER B 1160 REMARK 465 TYR B 1161 REMARK 465 VAL B 1162 REMARK 465 SER B 1163 REMARK 465 ALA B 1164 REMARK 465 ILE B 1165 REMARK 465 THR B 1166 REMARK 465 GLN B 1167 REMARK 465 GLY B 1168 REMARK 465 ARG B 1169 REMARK 465 ARG B 1170 REMARK 465 GLU B 1171 REMARK 465 GLU B 1172 REMARK 465 GLU B 1173 REMARK 465 THR B 1174 REMARK 465 PRO B 1175 REMARK 465 VAL B 1176 REMARK 465 GLU B 1177 REMARK 465 CYS B 1178 REMARK 465 PHE B 1179 REMARK 465 GLU B 1180 REMARK 465 PRO B 1181 REMARK 465 SER B 1182 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 1017 HG1 THR B 1019 1.52 REMARK 500 HG1 THR A 1118 O GLY A 1121 1.57 REMARK 500 HH12 ARG A 55 OD1 ASP A 58 1.58 REMARK 500 O LEU B 1128 HH TYR B 1150 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 64 48.00 -101.29 REMARK 500 CYS A1080 63.34 37.59 REMARK 500 HIS A1092 -12.68 -143.88 REMARK 500 LYS A1157 35.28 -143.10 REMARK 500 CYS B1080 62.93 37.18 REMARK 500 HIS B1092 -13.42 -144.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5TFN RELATED DB: PDB REMARK 900 5TFN CONTAINS SAME PROTEIN WITHOUT A DELETION IN THE NS2B DOMAIN DBREF 5TFO A 48 75 UNP Q32ZE1 POLG_ZIKV 1416 1443 DBREF 5TFO A 78 85 PDB 5TFO 5TFO 78 85 DBREF 5TFO A 1001 1182 UNP Q32ZE1 POLG_ZIKV 1499 1680 DBREF 5TFO B 48 75 UNP Q32ZE1 POLG_ZIKV 1416 1443 DBREF 5TFO B 78 85 PDB 5TFO 5TFO 78 85 DBREF 5TFO B 1001 1182 UNP Q32ZE1 POLG_ZIKV 1499 1680 SEQADV 5TFO GLY A 46 UNP Q32ZE1 EXPRESSION TAG SEQADV 5TFO SER A 47 UNP Q32ZE1 EXPRESSION TAG SEQADV 5TFO GLY A 76 UNP Q32ZE1 INSERTION SEQADV 5TFO GLY A 77 UNP Q32ZE1 INSERTION SEQADV 5TFO ALA A 86 UNP Q32ZE1 LINKER SEQADV 5TFO GLY A 87 UNP Q32ZE1 LINKER SEQADV 5TFO GLY A 88 UNP Q32ZE1 LINKER SEQADV 5TFO GLY A 89 UNP Q32ZE1 LINKER SEQADV 5TFO GLY A 90 UNP Q32ZE1 LINKER SEQADV 5TFO SER A 91 UNP Q32ZE1 LINKER SEQADV 5TFO GLY A 92 UNP Q32ZE1 LINKER SEQADV 5TFO GLY A 93 UNP Q32ZE1 LINKER SEQADV 5TFO GLY A 94 UNP Q32ZE1 LINKER SEQADV 5TFO GLY A 95 UNP Q32ZE1 LINKER SEQADV 5TFO SER A 1056 UNP Q32ZE1 ALA 1554 CONFLICT SEQADV 5TFO HIS A 1092 UNP Q32ZE1 LEU 1590 CONFLICT SEQADV 5TFO ARG A 1169 UNP Q32ZE1 LYS 1667 CONFLICT SEQADV 5TFO GLY B 46 UNP Q32ZE1 EXPRESSION TAG SEQADV 5TFO SER B 47 UNP Q32ZE1 EXPRESSION TAG SEQADV 5TFO GLY B 76 UNP Q32ZE1 INSERTION SEQADV 5TFO GLY B 77 UNP Q32ZE1 INSERTION SEQADV 5TFO ALA B 86 UNP Q32ZE1 LINKER SEQADV 5TFO GLY B 87 UNP Q32ZE1 LINKER SEQADV 5TFO GLY B 88 UNP Q32ZE1 LINKER SEQADV 5TFO GLY B 89 UNP Q32ZE1 LINKER SEQADV 5TFO GLY B 90 UNP Q32ZE1 LINKER SEQADV 5TFO SER B 91 UNP Q32ZE1 LINKER SEQADV 5TFO GLY B 92 UNP Q32ZE1 LINKER SEQADV 5TFO GLY B 93 UNP Q32ZE1 LINKER SEQADV 5TFO GLY B 94 UNP Q32ZE1 LINKER SEQADV 5TFO GLY B 95 UNP Q32ZE1 LINKER SEQADV 5TFO SER B 1056 UNP Q32ZE1 ALA 1554 CONFLICT SEQADV 5TFO HIS B 1092 UNP Q32ZE1 LEU 1590 CONFLICT SEQADV 5TFO ARG B 1169 UNP Q32ZE1 LYS 1667 CONFLICT SEQRES 1 A 232 GLY SER SER VAL ASP MET TYR ILE GLU ARG ALA GLY ASP SEQRES 2 A 232 ILE THR TRP GLU LYS ASP ALA GLU VAL THR GLY ASN SER SEQRES 3 A 232 PRO ARG LEU ASP GLY GLY VAL GLU ASP ASP GLY PRO PRO SEQRES 4 A 232 MET ALA GLY GLY GLY GLY SER GLY GLY GLY GLY SER GLY SEQRES 5 A 232 ALA LEU TRP ASP VAL PRO ALA PRO LYS GLU VAL LYS LYS SEQRES 6 A 232 GLY GLU THR THR ASP GLY VAL TYR ARG VAL MET THR ARG SEQRES 7 A 232 ARG LEU LEU GLY SER THR GLN VAL GLY VAL GLY VAL MET SEQRES 8 A 232 GLN GLU GLY VAL PHE HIS THR MET TRP HIS VAL THR LYS SEQRES 9 A 232 GLY SER ALA LEU ARG SER GLY GLU GLY ARG LEU ASP PRO SEQRES 10 A 232 TYR TRP GLY ASP VAL LYS GLN ASP LEU VAL SER TYR CYS SEQRES 11 A 232 GLY PRO TRP LYS LEU ASP ALA ALA TRP ASP GLY HIS SER SEQRES 12 A 232 GLU VAL GLN LEU LEU ALA VAL PRO PRO GLY GLU ARG ALA SEQRES 13 A 232 ARG ASN ILE GLN THR LEU PRO GLY ILE PHE LYS THR LYS SEQRES 14 A 232 ASP GLY ASP ILE GLY ALA VAL ALA LEU ASP TYR PRO ALA SEQRES 15 A 232 GLY THR SER GLY SER PRO ILE LEU ASP LYS CYS GLY ARG SEQRES 16 A 232 VAL ILE GLY LEU TYR GLY ASN GLY VAL VAL ILE LYS ASN SEQRES 17 A 232 GLY SER TYR VAL SER ALA ILE THR GLN GLY ARG ARG GLU SEQRES 18 A 232 GLU GLU THR PRO VAL GLU CYS PHE GLU PRO SER SEQRES 1 B 232 GLY SER SER VAL ASP MET TYR ILE GLU ARG ALA GLY ASP SEQRES 2 B 232 ILE THR TRP GLU LYS ASP ALA GLU VAL THR GLY ASN SER SEQRES 3 B 232 PRO ARG LEU ASP GLY GLY VAL GLU ASP ASP GLY PRO PRO SEQRES 4 B 232 MET ALA GLY GLY GLY GLY SER GLY GLY GLY GLY SER GLY SEQRES 5 B 232 ALA LEU TRP ASP VAL PRO ALA PRO LYS GLU VAL LYS LYS SEQRES 6 B 232 GLY GLU THR THR ASP GLY VAL TYR ARG VAL MET THR ARG SEQRES 7 B 232 ARG LEU LEU GLY SER THR GLN VAL GLY VAL GLY VAL MET SEQRES 8 B 232 GLN GLU GLY VAL PHE HIS THR MET TRP HIS VAL THR LYS SEQRES 9 B 232 GLY SER ALA LEU ARG SER GLY GLU GLY ARG LEU ASP PRO SEQRES 10 B 232 TYR TRP GLY ASP VAL LYS GLN ASP LEU VAL SER TYR CYS SEQRES 11 B 232 GLY PRO TRP LYS LEU ASP ALA ALA TRP ASP GLY HIS SER SEQRES 12 B 232 GLU VAL GLN LEU LEU ALA VAL PRO PRO GLY GLU ARG ALA SEQRES 13 B 232 ARG ASN ILE GLN THR LEU PRO GLY ILE PHE LYS THR LYS SEQRES 14 B 232 ASP GLY ASP ILE GLY ALA VAL ALA LEU ASP TYR PRO ALA SEQRES 15 B 232 GLY THR SER GLY SER PRO ILE LEU ASP LYS CYS GLY ARG SEQRES 16 B 232 VAL ILE GLY LEU TYR GLY ASN GLY VAL VAL ILE LYS ASN SEQRES 17 B 232 GLY SER TYR VAL SER ALA ILE THR GLN GLY ARG ARG GLU SEQRES 18 B 232 GLU GLU THR PRO VAL GLU CYS PHE GLU PRO SER FORMUL 3 HOH *23(H2 O) HELIX 1 AA1 MET A 1049 LYS A 1054 1 6 HELIX 2 AA2 MET B 1049 LYS B 1054 1 6 SHEET 1 AA1 6 MET A 51 GLY A 57 0 SHEET 2 AA1 6 GLY A1021 ARG A1028 -1 O MET A1026 N TYR A 52 SHEET 3 AA1 6 SER A1033 GLN A1042 -1 O GLY A1037 N VAL A1025 SHEET 4 AA1 6 VAL A1045 THR A1048 -1 O HIS A1047 N VAL A1040 SHEET 5 AA1 6 LEU A1076 TYR A1079 -1 O VAL A1077 N THR A1048 SHEET 6 AA1 6 PRO A1067 ASP A1071 -1 N TYR A1068 O SER A1078 SHEET 1 AA2 5 GLU A 66 VAL A 67 0 SHEET 2 AA2 5 ARG A1107 THR A1111 1 O GLN A1110 N GLU A 66 SHEET 3 AA2 5 VAL A1095 ALA A1099 -1 N VAL A1095 O THR A1111 SHEET 4 AA2 5 PRO A1138 LEU A1140 -1 O LEU A1140 N GLN A1096 SHEET 5 AA2 5 VAL A1146 LEU A1149 -1 O GLY A1148 N ILE A1139 SHEET 1 AA3 2 LEU A1058 SER A1060 0 SHEET 2 AA3 2 GLY A1063 LEU A1065 -1 O LEU A1065 N LEU A1058 SHEET 1 AA4 3 GLY A1114 LYS A1117 0 SHEET 2 AA4 3 ASP A1122 ALA A1125 -1 O ILE A1123 N PHE A1116 SHEET 3 AA4 3 VAL A1154 VAL A1155 -1 O VAL A1154 N GLY A1124 SHEET 1 AA5 8 GLY B1063 LEU B1065 0 SHEET 2 AA5 8 LEU B1058 SER B1060 -1 N LEU B1058 O LEU B1065 SHEET 3 AA5 8 TYR B 52 GLY B 57 1 N ILE B 53 O ARG B1059 SHEET 4 AA5 8 GLY B1021 ARG B1028 -1 O ARG B1024 N GLU B 54 SHEET 5 AA5 8 SER B1033 GLN B1042 -1 O MET B1041 N GLY B1021 SHEET 6 AA5 8 VAL B1045 THR B1048 -1 O HIS B1047 N VAL B1040 SHEET 7 AA5 8 LEU B1076 TYR B1079 -1 O VAL B1077 N THR B1048 SHEET 8 AA5 8 PRO B1067 ASP B1071 -1 N TYR B1068 O SER B1078 SHEET 1 AA6 5 ARG B1107 THR B1111 0 SHEET 2 AA6 5 VAL B1095 ALA B1099 -1 N VAL B1095 O THR B1111 SHEET 3 AA6 5 PRO B1138 LEU B1140 -1 O LEU B1140 N GLN B1096 SHEET 4 AA6 5 VAL B1146 LEU B1149 -1 O GLY B1148 N ILE B1139 SHEET 5 AA6 5 GLY B1153 VAL B1154 -1 O GLY B1153 N LEU B1149 SHEET 1 AA7 2 GLY B1114 LYS B1117 0 SHEET 2 AA7 2 ASP B1122 ALA B1125 -1 O ILE B1123 N PHE B1116 SSBOND 1 CYS A 1143 CYS B 1143 1555 3455 2.03 CRYST1 55.198 55.198 250.772 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018117 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018117 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003988 0.00000