HEADER MEMBRANE PROTEIN 03-OCT-16 5TJ6
TITLE CA2+ BOUND APLYSIA SLO1
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: HIGH CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL;
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: APLYSIA CALIFORNICA;
SOURCE 3 ORGANISM_COMMON: CALIFORNIA SEA HARE;
SOURCE 4 ORGANISM_TAXID: 6500;
SOURCE 5 EXPRESSION_SYSTEM: TRICHOPLUSIA NI;
SOURCE 6 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111;
SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS
KEYWDS ION CHANNEL, K+ CHANNEL, CA2+ BOUND, HIGH CONDUCTANCE, MEMBRANE
KEYWDS 2 PROTEIN
EXPDTA ELECTRON MICROSCOPY
AUTHOR R.MACKINNON,X.TAO,R.K.HITE
REVDAT 8 13-MAR-24 5TJ6 1 REMARK
REVDAT 7 18-DEC-19 5TJ6 1 CRYST1 SCALE
REVDAT 6 20-NOV-19 5TJ6 1 REMARK
REVDAT 5 03-OCT-18 5TJ6 1 REMARK
REVDAT 4 27-SEP-17 5TJ6 1 REMARK
REVDAT 3 18-JAN-17 5TJ6 1 JRNL
REVDAT 2 11-JAN-17 5TJ6 1 JRNL
REVDAT 1 14-DEC-16 5TJ6 0
JRNL AUTH X.TAO,R.K.HITE,R.MACKINNON
JRNL TITL CRYO-EM STRUCTURE OF THE OPEN HIGH-CONDUCTANCE
JRNL TITL 2 CA(2+)-ACTIVATED K(+) CHANNEL.
JRNL REF NATURE V. 541 46 2017
JRNL REFN ESSN 1476-4687
JRNL PMID 27974795
JRNL DOI 10.1038/NATURE20608
REMARK 2
REMARK 2 RESOLUTION. 3.50 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 SOFTWARE PACKAGES : RELION, SERIALEM, CTFFIND4, COOT,
REMARK 3 RELION, FREALIGN, RELION, FREALIGN,
REMARK 3 REFMAC
REMARK 3 RECONSTRUCTION SCHEMA : NULL
REMARK 3
REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT
REMARK 3 PDB ENTRY : NULL
REMARK 3 REFINEMENT SPACE : RECIPROCAL
REMARK 3 REFINEMENT PROTOCOL : AB INITIO MODEL
REMARK 3 REFINEMENT TARGET : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE : 100.000
REMARK 3
REMARK 3 FITTING PROCEDURE : NULL
REMARK 3
REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS
REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL
REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL
REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.500
REMARK 3 NUMBER OF PARTICLES : 115000
REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE
REMARK 3 CORRECTION
REMARK 3
REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL
REMARK 3
REMARK 3 OTHER DETAILS: NULL
REMARK 4
REMARK 4 5TJ6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-OCT-16.
REMARK 100 THE DEPOSITION ID IS D_1000224169.
REMARK 245
REMARK 245 EXPERIMENTAL DETAILS
REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE
REMARK 245 SPECIMEN TYPE : NULL
REMARK 245
REMARK 245 ELECTRON MICROSCOPE SAMPLE
REMARK 245 SAMPLE TYPE : PARTICLE
REMARK 245 PARTICLE TYPE : POINT
REMARK 245 NAME OF SAMPLE : CA2+ BOUND APLYSIA SLO1
REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 7.00
REMARK 245 SAMPLE SUPPORT DETAILS : NULL
REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL
REMARK 245 SAMPLE BUFFER : NULL
REMARK 245 PH : 8.00
REMARK 245 SAMPLE DETAILS : NULL
REMARK 245
REMARK 245 DATA ACQUISITION
REMARK 245 DATE OF EXPERIMENT : NULL
REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 2000
REMARK 245 TEMPERATURE (KELVIN) : NULL
REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS
REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K)
REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00
REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00
REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL
REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL
REMARK 245 NOMINAL CS : 2.70
REMARK 245 IMAGING MODE : BRIGHT FIELD
REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 180.00
REMARK 245 ILLUMINATION MODE : FLOOD BEAM
REMARK 245 NOMINAL MAGNIFICATION : 22500
REMARK 245 CALIBRATED MAGNIFICATION : NULL
REMARK 245 SOURCE : FIELD EMISSION GUN
REMARK 245 ACCELERATION VOLTAGE (KV) : 300
REMARK 245 IMAGING DETAILS : NULL
REMARK 247
REMARK 247 ELECTRON MICROSCOPY
REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON
REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE
REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES
REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION
REMARK 247 OF THE STRUCTURE FACTORS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR
REMARK 300 CYCLIC POINT SYMMETRY (SCHOENFLIES SYMBOL = C).
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 332.80000
REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 332.80000
REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 332.80000
REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 332.80000
REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 1
REMARK 465 ALA A 2
REMARK 465 SER A 3
REMARK 465 SER A 4
REMARK 465 SER A 5
REMARK 465 SER A 6
REMARK 465 THR A 7
REMARK 465 SER A 8
REMARK 465 CYS A 9
REMARK 465 GLU A 10
REMARK 465 PRO A 11
REMARK 465 GLY A 12
REMARK 465 ASP A 13
REMARK 465 CYS A 45
REMARK 465 ARG A 46
REMARK 465 LYS A 47
REMARK 465 LYS A 48
REMARK 465 LYS A 49
REMARK 465 CYS A 50
REMARK 465 ILE A 51
REMARK 465 GLN A 52
REMARK 465 VAL A 53
REMARK 465 SER A 54
REMARK 465 ASN A 55
REMARK 465 PRO A 56
REMARK 465 VAL A 57
REMARK 465 PRO A 58
REMARK 465 THR A 59
REMARK 465 ALA A 60
REMARK 465 ARG A 61
REMARK 465 THR A 62
REMARK 465 THR A 63
REMARK 465 SER A 64
REMARK 465 LEU A 65
REMARK 465 ASP A 66
REMARK 465 GLN A 67
REMARK 465 LYS A 68
REMARK 465 SER A 69
REMARK 465 PHE A 70
REMARK 465 MET A 71
REMARK 465 LYS A 72
REMARK 465 ASN A 73
REMARK 465 SER A 74
REMARK 465 ASP A 75
REMARK 465 PRO A 76
REMARK 465 GLU A 77
REMARK 465 ILE A 78
REMARK 465 THR A 125
REMARK 465 SER A 126
REMARK 465 VAL A 127
REMARK 465 GLU A 128
REMARK 465 THR A 129
REMARK 465 CYS A 130
REMARK 465 LEU A 131
REMARK 465 PRO A 132
REMARK 465 TRP A 133
REMARK 465 GLN A 562
REMARK 465 GLU A 563
REMARK 465 ASP A 564
REMARK 465 THR A 565
REMARK 465 ARG A 566
REMARK 465 ARG A 622
REMARK 465 PRO A 623
REMARK 465 LEU A 624
REMARK 465 ALA A 625
REMARK 465 MET A 626
REMARK 465 PHE A 627
REMARK 465 LYS A 628
REMARK 465 LYS A 629
REMARK 465 GLY A 630
REMARK 465 ALA A 631
REMARK 465 ALA A 632
REMARK 465 ALA A 633
REMARK 465 VAL A 634
REMARK 465 LEU A 635
REMARK 465 ALA A 636
REMARK 465 LEU A 637
REMARK 465 GLN A 638
REMARK 465 ARG A 639
REMARK 465 THR A 640
REMARK 465 PRO A 641
REMARK 465 GLY A 642
REMARK 465 LEU A 643
REMARK 465 ALA A 644
REMARK 465 VAL A 645
REMARK 465 GLU A 646
REMARK 465 PRO A 647
REMARK 465 ASP A 648
REMARK 465 GLY A 649
REMARK 465 GLU A 650
REMARK 465 ALA A 651
REMARK 465 ASN A 652
REMARK 465 ASP A 653
REMARK 465 LYS A 654
REMARK 465 ASP A 655
REMARK 465 LYS A 656
REMARK 465 SER A 657
REMARK 465 ARG A 658
REMARK 465 GLY A 659
REMARK 465 THR A 660
REMARK 465 SER A 661
REMARK 465 THR A 662
REMARK 465 SER A 663
REMARK 465 LYS A 664
REMARK 465 ALA A 665
REMARK 465 VAL A 666
REMARK 465 THR A 667
REMARK 465 SER A 668
REMARK 465 PHE A 669
REMARK 465 PRO A 670
REMARK 465 GLU A 671
REMARK 465 LYS A 672
REMARK 465 ARG A 673
REMARK 465 LYS A 674
REMARK 465 PRO A 675
REMARK 465 GLN A 676
REMARK 465 SER A 677
REMARK 465 ARG A 678
REMARK 465 ARG A 679
REMARK 465 LYS A 680
REMARK 465 PRO A 681
REMARK 465 SER A 682
REMARK 465 THR A 683
REMARK 465 THR A 684
REMARK 465 LEU A 685
REMARK 465 LYS A 686
REMARK 465 SER A 687
REMARK 465 LYS A 688
REMARK 465 SER A 689
REMARK 465 PRO A 690
REMARK 465 SER A 691
REMARK 465 GLU A 692
REMARK 465 ASP A 693
REMARK 465 SER A 694
REMARK 465 VAL A 695
REMARK 465 PRO A 696
REMARK 465 PRO A 697
REMARK 465 PRO A 698
REMARK 465 PRO A 699
REMARK 465 PRO A 700
REMARK 465 PRO A 701
REMARK 465 VAL A 702
REMARK 465 ASP A 703
REMARK 465 GLU A 704
REMARK 465 PRO A 705
REMARK 465 THR A 857
REMARK 465 MET A 858
REMARK 465 GLY A 859
REMARK 465 LEU A 860
REMARK 465 ILE A 861
REMARK 465 GLN A 862
REMARK 465 SER A 863
REMARK 465 SER A 864
REMARK 465 ASN A 865
REMARK 465 PHE A 866
REMARK 465 VAL A 867
REMARK 465 PRO A 868
REMARK 465 GLY A 869
REMARK 465 GLY A 870
REMARK 465 PHE A 871
REMARK 465 SER A 872
REMARK 465 PRO A 873
REMARK 465 LEU A 874
REMARK 465 HIS A 875
REMARK 465 GLU A 876
REMARK 465 ASN A 877
REMARK 465 LYS A 878
REMARK 465 ARG A 879
REMARK 465 SER A 880
REMARK 465 GLN A 881
REMARK 465 GLU A 1032
REMARK 465 SER A 1033
REMARK 465 VAL A 1034
REMARK 465 ARG A 1035
REMARK 465 SER A 1036
REMARK 465 GLN A 1066
REMARK 465 ILE A 1067
REMARK 465 THR A 1068
REMARK 465 ASN A 1069
REMARK 465 HIS A 1070
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 ARG A 14 CG CD NE CZ NH1 NH2
REMARK 470 ASN A 124 CG OD1 ND2
REMARK 470 SER A 134 OG
REMARK 470 ARG A 561 CG CD NE CZ NH1 NH2
REMARK 470 GLU A 567 CG CD OE1 OE2
REMARK 470 LYS A 604 CG CD CE NZ
REMARK 470 ASN A 605 CG OD1 ND2
REMARK 470 LYS A 617 CG CD CE NZ
REMARK 470 LYS A 618 CG CD CE NZ
REMARK 470 CYS A 619 SG
REMARK 470 LYS A 620 CG CD CE NZ
REMARK 470 CYS A 621 SG
REMARK 470 ASP A 856 CG OD1 OD2
REMARK 470 ASN A1031 CG OD1 ND2
REMARK 470 LYS A1065 CG CD CE NZ
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 VAL A 168 55.28 -114.11
REMARK 500 THR A 218 153.34 71.45
REMARK 500 ALA A 258 88.79 -165.12
REMARK 500 ILE A 299 -62.02 -94.47
REMARK 500 TRP A 464 108.19 -59.39
REMARK 500 LYS A 550 -60.52 -90.37
REMARK 500 ILE A 616 34.52 -95.14
REMARK 500 ARG A 764 40.81 -97.16
REMARK 500 ASN A 794 50.85 -91.09
REMARK 500 LEU A 818 50.28 -103.64
REMARK 500 MET A 821 117.47 -162.75
REMARK 500 ARG A 830 -80.43 -70.39
REMARK 500 ASN A 831 76.51 -112.54
REMARK 500 GLU A 833 -81.76 -140.12
REMARK 500 ASP A 839 43.18 -96.87
REMARK 500 ILE A 951 -65.78 -96.91
REMARK 500 CYS A 974 159.28 71.26
REMARK 500 LEU A 992 46.46 -98.12
REMARK 500 SER A1039 61.63 -100.13
REMARK 500 ASN A1046 75.12 44.05
REMARK 500
REMARK 500 REMARK: NULL
REMARK 610
REMARK 610 MISSING HETEROATOM
REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 610 I=INSERTION CODE):
REMARK 610 M RES C SSEQI
REMARK 610 PGW A 1109
REMARK 610 PGW A 1110
REMARK 610 PGW A 1111
REMARK 610 PGW A 1112
REMARK 610 PGW A 1113
REMARK 610 PGW A 1114
REMARK 610 PGW A 1115
REMARK 610 PGW A 1116
REMARK 610 PGW A 1117
REMARK 610 PGW A 1118
REMARK 610 PGW A 1119
REMARK 610 PGW A 1120
REMARK 610 PGW A 1121
REMARK 610 PGW A 1122
REMARK 610 PGW A 1123
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 K A1104 K
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 THR A 276 O
REMARK 620 2 VAL A 277 O 78.6
REMARK 620 N 1
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 K A1105 K
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 THR A 276 O
REMARK 620 2 THR A 276 OG1 57.5
REMARK 620 N 1
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 K A1103 K
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 VAL A 277 O
REMARK 620 2 GLY A 278 O 67.4
REMARK 620 N 1
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 K A1102 K
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLY A 278 O
REMARK 620 2 PHE A 279 O 75.5
REMARK 620 N 1
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CA A1107 CA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASP A 356 OD2
REMARK 620 2 ARG A 503 O 77.2
REMARK 620 3 GLY A 523 O 150.6 108.8
REMARK 620 4 GLU A 525 OE1 86.4 83.1 66.4
REMARK 620 5 GLU A 591 O 81.9 151.1 80.7 75.8
REMARK 620 N 1 2 3 4
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CA A1108 CA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLN A 899 O
REMARK 620 2 ASP A 902 O 91.9
REMARK 620 3 ASP A 905 OD1 145.0 95.6
REMARK 620 4 ASP A 907 OD2 87.8 160.9 95.5
REMARK 620 N 1 2 3
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue K A 1102
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue K A 1103
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue K A 1104
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue K A 1105
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1106
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 1107
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 1108
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue PGW A 1109
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue PGW A 1111
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue PGW A 1112
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue PGW A 1113
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue PGW A 1116
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue PGW A 1117
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue PGW A 1120
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue PGW A 1122
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: EMD-8410 RELATED DB: EMDB
REMARK 900 CA2+ BOUND APLYSIA SLO1
REMARK 900 RELATED ID: 5JTI RELATED DB: PDB
REMARK 900 RELATED ID: EMD-8414 RELATED DB: EMDB
DBREF 5TJ6 A 1 1070 UNP Q5QJC5 Q5QJC5_APLCA 1 1070
SEQADV 5TJ6 ALA A 2 UNP Q5QJC5 THR 2 CONFLICT
SEQRES 1 A 1070 MET ALA SER SER SER SER THR SER CYS GLU PRO GLY ASP
SEQRES 2 A 1070 ARG GLN TRP TYR SER PHE LEU ALA SER SER LEU VAL THR
SEQRES 3 A 1070 PHE GLY SER GLY LEU VAL VAL ILE ILE ILE TYR ARG ILE
SEQRES 4 A 1070 VAL LEU TRP LEU CYS CYS ARG LYS LYS LYS CYS ILE GLN
SEQRES 5 A 1070 VAL SER ASN PRO VAL PRO THR ALA ARG THR THR SER LEU
SEQRES 6 A 1070 ASP GLN LYS SER PHE MET LYS ASN SER ASP PRO GLU ILE
SEQRES 7 A 1070 GLY TRP MET THR GLU ALA LYS ASP TRP ALA GLY GLU LEU
SEQRES 8 A 1070 ILE SER GLY GLN THR THR THR GLY ARG ILE LEU VAL GLY
SEQRES 9 A 1070 LEU VAL PHE LEU LEU SER ILE ALA SER LEU ILE ILE TYR
SEQRES 10 A 1070 PHE ILE ASP ALA SER THR ASN THR SER VAL GLU THR CYS
SEQRES 11 A 1070 LEU PRO TRP SER SER SER THR THR GLN GLN VAL ASP LEU
SEQRES 12 A 1070 ALA PHE ASN VAL PHE PHE MET ILE TYR PHE PHE ILE ARG
SEQRES 13 A 1070 PHE VAL ALA ALA ASN ASP LYS LEU TRP PHE TRP VAL GLU
SEQRES 14 A 1070 LEU PHE SER PHE VAL ASP TYR PHE THR ILE PRO PRO SER
SEQRES 15 A 1070 PHE VAL ALA ILE TYR LEU ASP ARG ASN TRP LEU GLY LEU
SEQRES 16 A 1070 ARG PHE LEU ARG ALA LEU ARG LEU MET SER ILE PRO ASP
SEQRES 17 A 1070 ILE LEU THR TYR LEU ASN VAL LEU LYS THR SER THR LEU
SEQRES 18 A 1070 ILE ARG LEU VAL GLN LEU VAL VAL SER PHE VAL SER LEU
SEQRES 19 A 1070 TRP LEU THR ALA ALA GLY PHE LEU HIS LEU LEU GLU ASN
SEQRES 20 A 1070 SER GLY ASP PRO PHE PHE ASP PHE GLY ASN ALA GLN HIS
SEQRES 21 A 1070 LEU THR TYR TRP GLU CYS LEU TYR PHE LEU MET VAL THR
SEQRES 22 A 1070 MET SER THR VAL GLY PHE GLY ASP ILE PHE ALA THR THR
SEQRES 23 A 1070 VAL LEU GLY ARG THR PHE VAL VAL ILE PHE ILE MET ILE
SEQRES 24 A 1070 PHE ILE GLY LEU PHE ALA SER PHE ILE PRO GLU ILE ALA
SEQRES 25 A 1070 GLU ILE LEU GLY LYS ARG GLN LYS TYR GLY GLY SER TYR
SEQRES 26 A 1070 LYS LYS GLU ARG GLY LYS ARG HIS VAL VAL VAL CYS GLY
SEQRES 27 A 1070 TYR ILE THR PHE ASP SER VAL SER ASN PHE LEU LYS ASP
SEQRES 28 A 1070 PHE LEU HIS LYS ASP ARG GLU ASP VAL ASP VAL GLU ILE
SEQRES 29 A 1070 VAL PHE LEU HIS LYS GLY LEU PRO GLY LEU GLU LEU GLU
SEQRES 30 A 1070 GLY LEU LEU LYS ARG HIS PHE THR GLN VAL GLU TYR PHE
SEQRES 31 A 1070 TRP GLY SER VAL MET ASP ALA ASN ASP LEU GLU ARG VAL
SEQRES 32 A 1070 LYS ILE GLN GLU ALA ASP ALA CYS LEU VAL LEU ALA ASN
SEQRES 33 A 1070 LYS TYR CYS GLN ASP PRO ASP GLN GLU ASP ALA ALA ASN
SEQRES 34 A 1070 ILE MET ARG VAL ILE SER ILE LYS ASN TYR HIS SER ASP
SEQRES 35 A 1070 ILE LYS VAL ILE VAL GLN LEU LEU GLN TYR HIS ASN LYS
SEQRES 36 A 1070 ALA TYR LEU LEU ASN ILE PRO SER TRP ASP TRP LYS ARG
SEQRES 37 A 1070 GLY ASP ASP ALA VAL CYS VAL ALA GLU LEU LYS LEU GLY
SEQRES 38 A 1070 PHE ILE ALA GLN SER CYS LEU ALA PRO GLY PHE SER THR
SEQRES 39 A 1070 LEU MET ALA ASN LEU PHE THR MET ARG SER TYR LYS PRO
SEQRES 40 A 1070 THR PRO GLU MET SER GLN TRP GLN THR ASP TYR MET ARG
SEQRES 41 A 1070 GLY THR GLY MET GLU MET TYR THR GLU TYR LEU SER SER
SEQRES 42 A 1070 ALA PHE ASN ALA LEU THR PHE PRO GLU ALA ALA GLU LEU
SEQRES 43 A 1070 CYS PHE SER LYS LEU LYS LEU LEU LEU LEU ALA ILE GLU
SEQRES 44 A 1070 VAL ARG GLN GLU ASP THR ARG GLU SER THR LEU ALA ILE
SEQRES 45 A 1070 ASN PRO GLY PRO LYS VAL LYS ILE GLU ASN ALA THR GLN
SEQRES 46 A 1070 GLY PHE PHE ILE ALA GLU SER ALA GLU GLU VAL LYS ARG
SEQRES 47 A 1070 ALA PHE TYR TYR CYS LYS ASN CYS HIS ALA ASN VAL SER
SEQRES 48 A 1070 ASP VAL ARG GLN ILE LYS LYS CYS LYS CYS ARG PRO LEU
SEQRES 49 A 1070 ALA MET PHE LYS LYS GLY ALA ALA ALA VAL LEU ALA LEU
SEQRES 50 A 1070 GLN ARG THR PRO GLY LEU ALA VAL GLU PRO ASP GLY GLU
SEQRES 51 A 1070 ALA ASN ASP LYS ASP LYS SER ARG GLY THR SER THR SER
SEQRES 52 A 1070 LYS ALA VAL THR SER PHE PRO GLU LYS ARG LYS PRO GLN
SEQRES 53 A 1070 SER ARG ARG LYS PRO SER THR THR LEU LYS SER LYS SER
SEQRES 54 A 1070 PRO SER GLU ASP SER VAL PRO PRO PRO PRO PRO PRO VAL
SEQRES 55 A 1070 ASP GLU PRO ARG LYS PHE ASP SER THR GLY MET PHE HIS
SEQRES 56 A 1070 TRP CYS PRO ASP ARG PRO LEU ASN ASP CYS LEU GLN ASP
SEQRES 57 A 1070 ARG SER GLN ALA SER ALA SER GLY LEU ARG ASN HIS VAL
SEQRES 58 A 1070 VAL VAL CYS LEU PHE ALA ASP ALA ALA SER PRO LEU ILE
SEQRES 59 A 1070 GLY LEU ARG ASN LEU VAL MET PRO LEU ARG ALA SER ASN
SEQRES 60 A 1070 PHE HIS TYR HIS GLU LEU LYS PRO THR ILE ILE VAL GLY
SEQRES 61 A 1070 ASN LEU ASP TYR LEU HIS ARG GLU TRP LYS THR LEU GLN
SEQRES 62 A 1070 ASN PHE PRO LYS LEU SER ILE LEU PRO GLY SER PRO LEU
SEQRES 63 A 1070 ASN ARG ALA ASN LEU ARG ALA VAL ASN ILE ASN LEU CYS
SEQRES 64 A 1070 ASP MET CYS VAL ILE VAL SER ALA LYS ASP ARG ASN MET
SEQRES 65 A 1070 GLU ASP PRO ASN LEU VAL ASP LYS GLU ALA ILE LEU CYS
SEQRES 66 A 1070 SER LEU ASN ILE LYS ALA MET THR PHE ASP ASP THR MET
SEQRES 67 A 1070 GLY LEU ILE GLN SER SER ASN PHE VAL PRO GLY GLY PHE
SEQRES 68 A 1070 SER PRO LEU HIS GLU ASN LYS ARG SER GLN ALA GLY ALA
SEQRES 69 A 1070 ASN VAL PRO LEU ILE THR GLU LEU ALA ASN ASP SER ASN
SEQRES 70 A 1070 VAL GLN PHE LEU ASP GLN ASP ASP ASP ASP ASP PRO ASP
SEQRES 71 A 1070 THR GLU LEU TYR MET THR GLN PRO PHE ALA CYS GLY THR
SEQRES 72 A 1070 ALA PHE ALA VAL SER VAL LEU ASP SER LEU MET SER THR
SEQRES 73 A 1070 SER TYR PHE ASN ASP ASN ALA LEU THR LEU ILE ARG THR
SEQRES 74 A 1070 LEU ILE THR GLY GLY ALA THR PRO GLU LEU GLU GLN ILE
SEQRES 75 A 1070 LEU ALA GLU GLY ALA GLY MET ARG GLY GLY TYR CYS SER
SEQRES 76 A 1070 PRO ALA VAL LEU ALA ASN ARG ASP ARG CYS ARG VAL ALA
SEQRES 77 A 1070 GLN ILE SER LEU PHE ASP GLY PRO LEU ALA GLN PHE GLY
SEQRES 78 A 1070 GLN GLY GLY HIS TYR GLY GLU LEU PHE VAL TYR ALA LEU
SEQRES 79 A 1070 ARG HIS PHE GLY ILE LEU CYS ILE GLY LEU TYR ARG PHE
SEQRES 80 A 1070 ARG ASP THR ASN GLU SER VAL ARG SER PRO SER SER LYS
SEQRES 81 A 1070 ARG TYR VAL ILE THR ASN PRO PRO GLU ASP PHE PRO LEU
SEQRES 82 A 1070 LEU PRO THR ASP GLN VAL TYR VAL LEU THR TYR LYS GLN
SEQRES 83 A 1070 ILE THR ASN HIS
HET K A1101 1
HET K A1102 1
HET K A1103 1
HET K A1104 1
HET K A1105 1
HET MG A1106 1
HET CA A1107 1
HET CA A1108 1
HET PGW A1109 9
HET PGW A1110 9
HET PGW A1111 9
HET PGW A1112 9
HET PGW A1113 9
HET PGW A1114 19
HET PGW A1115 7
HET PGW A1116 12
HET PGW A1117 19
HET PGW A1118 7
HET PGW A1119 12
HET PGW A1120 19
HET PGW A1121 7
HET PGW A1122 9
HET PGW A1123 7
HETNAM K POTASSIUM ION
HETNAM MG MAGNESIUM ION
HETNAM CA CALCIUM ION
HETNAM PGW (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)
HETNAM 2 PGW PHOSPHORYL]OXY}-1-[(HEXADECANOYLOXY)METHYL]ETHYL (9Z)-
HETNAM 3 PGW OCTADEC-9-ENOATE
HETSYN PGW 1-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-[PHOSPHO-(1-
HETSYN 2 PGW GLYCEROL)]; PHOSPHATIDYLGLYCEROL
FORMUL 2 K 5(K 1+)
FORMUL 7 MG MG 2+
FORMUL 8 CA 2(CA 2+)
FORMUL 10 PGW 15(C40 H77 O10 P)
HELIX 1 AA1 ARG A 14 ARG A 38 1 25
HELIX 2 AA2 ILE A 39 CYS A 44 1 6
HELIX 3 AA3 THR A 82 SER A 93 1 12
HELIX 4 AA4 THR A 96 ASN A 124 1 29
HELIX 5 AA5 SER A 136 ALA A 160 1 25
HELIX 6 AA6 GLU A 169 ASP A 189 1 21
HELIX 7 AA7 ARG A 196 MET A 204 5 9
HELIX 8 AA8 SER A 205 ASN A 214 1 10
HELIX 9 AA9 THR A 218 GLY A 249 1 32
HELIX 10 AB1 ASP A 250 ASP A 254 5 5
HELIX 11 AB2 THR A 262 SER A 275 1 14
HELIX 12 AB3 THR A 286 LYS A 317 1 32
HELIX 13 AB4 THR A 341 LEU A 353 1 13
HELIX 14 AB5 GLY A 373 HIS A 383 1 11
HELIX 15 AB6 ALA A 397 LYS A 404 1 8
HELIX 16 AB7 ASP A 421 HIS A 440 1 20
HELIX 17 AB8 ASN A 454 ASN A 460 1 7
HELIX 18 AB9 VAL A 475 ALA A 489 1 15
HELIX 19 AC1 GLY A 491 THR A 501 1 11
HELIX 20 AC2 SER A 512 GLY A 523 1 12
HELIX 21 AC3 SER A 532 ASN A 536 5 5
HELIX 22 AC4 THR A 539 LYS A 550 1 12
HELIX 23 AC5 SER A 592 TYR A 601 1 10
HELIX 24 AC6 CYS A 606 VAL A 610 5 5
HELIX 25 AC7 ASP A 612 ILE A 616 5 5
HELIX 26 AC8 PRO A 721 LEU A 726 1 6
HELIX 27 AC9 ASP A 728 SER A 735 1 8
HELIX 28 AD1 LEU A 756 ARG A 764 1 9
HELIX 29 AD2 ASN A 781 GLN A 793 1 13
HELIX 30 AD3 ASN A 807 ASN A 815 1 9
HELIX 31 AD4 ASP A 839 MET A 852 1 14
HELIX 32 AD5 ASP A 895 LEU A 901 5 7
HELIX 33 AD6 GLU A 912 MET A 915 5 4
HELIX 34 AD7 THR A 916 CYS A 921 1 6
HELIX 35 AD8 SER A 928 ASP A 931 5 4
HELIX 36 AD9 SER A 932 ASN A 940 1 9
HELIX 37 AE1 ASN A 940 GLY A 953 1 14
HELIX 38 AE2 THR A 956 GLU A 965 1 10
HELIX 39 AE3 SER A 975 ALA A 980 1 6
HELIX 40 AE4 ASN A 981 ASP A 983 5 3
HELIX 41 AE5 LEU A 997 GLY A 1003 1 7
HELIX 42 AE6 HIS A 1005 GLY A 1018 1 14
SHEET 1 AA1 6 VAL A 387 TRP A 391 0
SHEET 2 AA1 6 VAL A 362 HIS A 368 1 N PHE A 366 O GLU A 388
SHEET 3 AA1 6 ARG A 332 GLY A 338 1 N VAL A 334 O VAL A 365
SHEET 4 AA1 6 ALA A 410 LEU A 414 1 O LEU A 414 N CYS A 337
SHEET 5 AA1 6 LYS A 444 LEU A 449 1 O ILE A 446 N VAL A 413
SHEET 6 AA1 6 ALA A 472 CYS A 474 1 O VAL A 473 N VAL A 447
SHEET 1 AA2 4 GLU A 525 TYR A 530 0
SHEET 2 AA2 4 GLN A 585 ALA A 590 -1 O PHE A 588 N TYR A 527
SHEET 3 AA2 4 LEU A 554 VAL A 560 -1 N ALA A 557 O PHE A 587
SHEET 4 AA2 4 THR A 569 ILE A 572 -1 O THR A 569 N VAL A 560
SHEET 1 AA3 2 PHE A 708 ASP A 709 0
SHEET 2 AA3 2 GLY A 971 GLY A 972 -1 O GLY A 972 N PHE A 708
SHEET 1 AA4 6 LEU A 798 PRO A 802 0
SHEET 2 AA4 6 THR A 776 GLY A 780 1 N ILE A 778 O LEU A 801
SHEET 3 AA4 6 HIS A 740 PHE A 746 1 N VAL A 743 O VAL A 779
SHEET 4 AA4 6 CYS A 819 SER A 826 1 O VAL A 823 N CYS A 744
SHEET 5 AA4 6 LEU A 888 LEU A 892 1 O ILE A 889 N ILE A 824
SHEET 6 AA4 6 ALA A 924 ALA A 926 1 O PHE A 925 N THR A 890
SHEET 1 AA5 4 VAL A 987 SER A 991 0
SHEET 2 AA5 4 GLN A1058 LEU A1062 -1 O VAL A1061 N ALA A 988
SHEET 3 AA5 4 LEU A1020 PHE A1027 -1 N TYR A1025 O GLN A1058
SHEET 4 AA5 4 ARG A1041 THR A1045 -1 O TYR A1042 N ARG A1026
LINK O THR A 276 K K A1104 1555 1555 2.49
LINK O THR A 276 K K A1105 1555 1555 2.86
LINK OG1 THR A 276 K K A1105 1555 1555 2.93
LINK O VAL A 277 K K A1103 1555 1555 2.52
LINK O VAL A 277 K K A1104 1555 1555 3.35
LINK O GLY A 278 K K A1102 1555 1555 2.77
LINK O GLY A 278 K K A1103 1555 1555 2.84
LINK O PHE A 279 K K A1102 1555 1555 3.19
LINK OD2 ASP A 356 CA CA A1107 1555 1555 2.36
LINK O ARG A 503 CA CA A1107 1555 1555 2.48
LINK O GLY A 523 CA CA A1107 1555 1555 2.50
LINK OE1 GLU A 525 CA CA A1107 1555 1555 2.94
LINK O GLU A 591 CA CA A1107 1555 1555 2.41
LINK O GLN A 899 CA CA A1108 1555 1555 2.39
LINK O ASP A 902 CA CA A1108 1555 1555 2.36
LINK OD1 ASP A 905 CA CA A1108 1555 1555 2.55
LINK OD2 ASP A 907 CA CA A1108 1555 1555 2.77
SITE 1 AC1 3 GLY A 278 PHE A 279 K A1103
SITE 1 AC2 4 VAL A 277 GLY A 278 K A1102 K A1104
SITE 1 AC3 4 THR A 276 VAL A 277 K A1103 K A1105
SITE 1 AC4 2 THR A 276 K A1104
SITE 1 AC5 3 GLU A 363 THR A 385 GLU A 388
SITE 1 AC6 5 ASP A 356 ARG A 503 GLY A 523 GLU A 525
SITE 2 AC6 5 GLU A 591
SITE 1 AC7 4 GLN A 899 ASP A 902 ASP A 905 ASP A 907
SITE 1 AC8 3 ALA A 112 THR A 137 THR A 138
SITE 1 AC9 2 TRP A 16 SER A 248
SITE 1 AD1 1 SER A 122
SITE 1 AD2 1 PGW A1122
SITE 1 AD3 1 THR A 291
SITE 1 AD4 2 TRP A 264 GLU A 265
SITE 1 AD5 2 ILE A 119 THR A 123
SITE 1 AD6 3 MET A 204 LEU A 234 PGW A1113
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000