HEADER PROTEIN TRANSPORT 19-OCT-16 5TP1 TITLE THE STRUCTURE OF THE C-TERMINUS OF VIRULENCE PROTEIN INCE FROM TITLE 2 CHLAMYDIA TRACHOMATIS BOUND TO MUS MUSCULUS SNX5-PX DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SORTING NEXIN-5; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: INCLUSION MEMBRANE PROTEIN E; COMPND 7 CHAIN: P, Q, R, S; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: SNX5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PH3C; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: CHLAMYDIA TRACHOMATIS D/UW-3/CX; SOURCE 13 ORGANISM_TAXID: 272561 KEYWDS HOST-PATHOGEN, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR O.ROSENBERG,N.CZUDNOCHOWSKI REVDAT 4 04-OCT-23 5TP1 1 REMARK REVDAT 3 11-DEC-19 5TP1 1 REMARK REVDAT 2 27-SEP-17 5TP1 1 REMARK REVDAT 1 30-AUG-17 5TP1 0 JRNL AUTH C.A.ELWELL,N.CZUDNOCHOWSKI,J.VON DOLLEN,J.R.JOHNSON, JRNL AUTH 2 R.NAKAGAWA,K.MIRRASHIDI,N.J.KROGAN,J.N.ENGEL,O.S.ROSENBERG JRNL TITL CHLAMYDIA INTERFERE WITH AN INTERACTION BETWEEN THE JRNL TITL 2 MANNOSE-6-PHOSPHATE RECEPTOR AND SORTING NEXINS TO JRNL TITL 3 COUNTERACT HOST RESTRICTION. JRNL REF ELIFE V. 6 2017 JRNL REFN ESSN 2050-084X JRNL PMID 28252385 JRNL DOI 10.7554/ELIFE.22709 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 67.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 29799 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 1441 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 67.8668 - 4.9762 0.99 2898 145 0.1757 0.2211 REMARK 3 2 4.9762 - 3.9499 1.00 2863 153 0.1766 0.2445 REMARK 3 3 3.9499 - 3.4506 1.00 2857 128 0.1889 0.2275 REMARK 3 4 3.4506 - 3.1351 0.99 2848 144 0.2053 0.2531 REMARK 3 5 3.1351 - 2.9104 0.99 2867 121 0.2155 0.3164 REMARK 3 6 2.9104 - 2.7388 0.99 2847 128 0.2232 0.2580 REMARK 3 7 2.7388 - 2.6017 0.99 2763 179 0.2197 0.3203 REMARK 3 8 2.6017 - 2.4884 0.99 2813 161 0.2477 0.2665 REMARK 3 9 2.4884 - 2.3926 0.99 2788 146 0.2569 0.3143 REMARK 3 10 2.3926 - 2.3100 0.98 2814 136 0.2849 0.3475 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 5680 REMARK 3 ANGLE : 0.640 7678 REMARK 3 CHIRALITY : 0.033 865 REMARK 3 PLANARITY : 0.003 989 REMARK 3 DIHEDRAL : 14.043 2127 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5TP1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1000224573. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.11587 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29845 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.310 REMARK 200 RESOLUTION RANGE LOW (A) : 67.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.17000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.31 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 1.28200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3HPC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SNX5/INCE IN 20 MM HEPES PH 7.4, 100 REMARK 280 MM NACL, 1 MM TCEP WAS MIXED WITH AN EQUAL VOLUME OF 26% (W/V) REMARK 280 PEG 1500, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 55.05000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, R REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, S REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 15 REMARK 465 PRO A 16 REMARK 465 SER A 17 REMARK 465 SER A 18 REMARK 465 PRO A 19 REMARK 465 SER A 20 REMARK 465 VAL A 21 REMARK 465 SER A 22 REMARK 465 VAL A 23 REMARK 465 ASP A 24 REMARK 465 LEU A 25 REMARK 465 ASN A 26 REMARK 465 VAL A 27 REMARK 465 ASP A 28 REMARK 465 THR A 179 REMARK 465 LYS A 180 REMARK 465 GLY B 15 REMARK 465 PRO B 16 REMARK 465 SER B 17 REMARK 465 SER B 18 REMARK 465 PRO B 19 REMARK 465 SER B 20 REMARK 465 VAL B 21 REMARK 465 SER B 22 REMARK 465 VAL B 23 REMARK 465 ASP B 24 REMARK 465 LEU B 25 REMARK 465 ASN B 26 REMARK 465 VAL B 27 REMARK 465 ASP B 28 REMARK 465 THR B 179 REMARK 465 LYS B 180 REMARK 465 GLY C 15 REMARK 465 PRO C 16 REMARK 465 SER C 17 REMARK 465 SER C 18 REMARK 465 PRO C 19 REMARK 465 SER C 20 REMARK 465 VAL C 21 REMARK 465 SER C 22 REMARK 465 VAL C 23 REMARK 465 ASP C 24 REMARK 465 LYS C 180 REMARK 465 GLY D 15 REMARK 465 PRO D 16 REMARK 465 SER D 17 REMARK 465 SER D 18 REMARK 465 PRO D 19 REMARK 465 SER D 20 REMARK 465 VAL D 21 REMARK 465 SER D 22 REMARK 465 VAL D 23 REMARK 465 ASP D 24 REMARK 465 LYS D 180 REMARK 465 PRO P 108 REMARK 465 ALA P 109 REMARK 465 ASN P 110 REMARK 465 GLN P 132 REMARK 465 PRO Q 108 REMARK 465 ALA Q 109 REMARK 465 ASN Q 110 REMARK 465 GLN Q 132 REMARK 465 PRO R 108 REMARK 465 ALA R 109 REMARK 465 ASN R 110 REMARK 465 GLU R 111 REMARK 465 THR R 131 REMARK 465 GLN R 132 REMARK 465 PRO S 108 REMARK 465 ALA S 109 REMARK 465 ASN S 110 REMARK 465 THR S 131 REMARK 465 GLN S 132 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 103 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 103 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 118 CG CD CE NZ REMARK 470 LYS B 177 CG CD CE NZ REMARK 470 LYS C 108 CG CD CE NZ REMARK 470 GLU C 111 CG CD OE1 OE2 REMARK 470 LYS C 118 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE A 89 O HOH A 201 2.04 REMARK 500 O HOH B 259 O HOH B 263 2.05 REMARK 500 O ALA A 130 O HOH A 202 2.06 REMARK 500 O VAL C 174 O HOH C 201 2.07 REMARK 500 O SER D 115 O HOH D 201 2.08 REMARK 500 OG1 THR A 83 O HOH A 203 2.08 REMARK 500 OE1 GLU A 70 O HOH A 204 2.09 REMARK 500 OE1 GLU B 70 O HOH B 201 2.10 REMARK 500 O HOH B 241 O HOH B 255 2.11 REMARK 500 O MET B 116 O HOH B 202 2.13 REMARK 500 O HOH A 228 O HOH A 256 2.16 REMARK 500 O GLU B 113 O HOH B 202 2.16 REMARK 500 O LYS B 177 O HOH B 203 2.17 REMARK 500 O ILE B 90 O HOH B 204 2.18 REMARK 500 OD2 ASP A 98 O HOH A 205 2.19 REMARK 500 OD2 ASP D 169 O HOH D 202 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 278 O HOH D 255 2546 2.04 REMARK 500 O HOH A 221 O HOH B 241 1655 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 42 -125.64 56.16 REMARK 500 LEU B 31 84.62 -151.68 REMARK 500 ARG B 42 -132.13 35.29 REMARK 500 LYS B 44 118.84 -163.53 REMARK 500 LYS B 177 43.19 -97.34 REMARK 500 LEU C 31 96.05 -161.17 REMARK 500 ARG C 42 -108.40 57.43 REMARK 500 GLU C 113 -2.01 -149.33 REMARK 500 ARG D 42 -112.71 48.63 REMARK 500 ASP D 169 42.21 -84.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 263 DISTANCE = 6.13 ANGSTROMS DBREF 5TP1 A 20 180 UNP Q9D8U8 SNX5_MOUSE 20 180 DBREF 5TP1 B 20 180 UNP Q9D8U8 SNX5_MOUSE 20 180 DBREF 5TP1 C 20 180 UNP Q9D8U8 SNX5_MOUSE 20 180 DBREF 5TP1 D 20 180 UNP Q9D8U8 SNX5_MOUSE 20 180 DBREF 5TP1 P 108 132 UNP P0DJI4 INCE_CHLTR 108 132 DBREF 5TP1 Q 108 132 UNP P0DJI4 INCE_CHLTR 108 132 DBREF 5TP1 R 108 132 UNP P0DJI4 INCE_CHLTR 108 132 DBREF 5TP1 S 108 132 UNP P0DJI4 INCE_CHLTR 108 132 SEQADV 5TP1 GLY A 15 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 PRO A 16 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 SER A 17 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 SER A 18 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 PRO A 19 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 GLY B 15 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 PRO B 16 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 SER B 17 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 SER B 18 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 PRO B 19 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 GLY C 15 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 PRO C 16 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 SER C 17 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 SER C 18 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 PRO C 19 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 GLY D 15 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 PRO D 16 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 SER D 17 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 SER D 18 UNP Q9D8U8 EXPRESSION TAG SEQADV 5TP1 PRO D 19 UNP Q9D8U8 EXPRESSION TAG SEQRES 1 A 166 GLY PRO SER SER PRO SER VAL SER VAL ASP LEU ASN VAL SEQRES 2 A 166 ASP PRO SER LEU GLN ILE ASP ILE PRO ASP ALA LEU SER SEQRES 3 A 166 GLU ARG ASP LYS VAL LYS PHE THR VAL HIS THR LYS THR SEQRES 4 A 166 THR LEU SER THR PHE GLN SER PRO GLU PHE SER VAL THR SEQRES 5 A 166 ARG GLN HIS GLU ASP PHE VAL TRP LEU HIS ASP THR LEU SEQRES 6 A 166 THR GLU THR THR ASP TYR ALA GLY LEU ILE ILE PRO PRO SEQRES 7 A 166 ALA PRO THR LYS PRO ASP PHE ASP GLY PRO ARG GLU LYS SEQRES 8 A 166 MET GLN LYS LEU GLY GLU GLY GLU GLY SER MET THR LYS SEQRES 9 A 166 GLU GLU PHE ALA LYS MET LYS GLN GLU LEU GLU ALA GLU SEQRES 10 A 166 TYR LEU ALA VAL PHE LYS LYS THR VAL SER THR HIS GLU SEQRES 11 A 166 VAL PHE LEU GLN ARG LEU SER SER HIS PRO VAL LEU SER SEQRES 12 A 166 LYS ASP ARG ASN PHE HIS VAL PHE LEU GLU TYR ASP GLN SEQRES 13 A 166 ASP LEU SER VAL ARG ARG LYS ASN THR LYS SEQRES 1 B 166 GLY PRO SER SER PRO SER VAL SER VAL ASP LEU ASN VAL SEQRES 2 B 166 ASP PRO SER LEU GLN ILE ASP ILE PRO ASP ALA LEU SER SEQRES 3 B 166 GLU ARG ASP LYS VAL LYS PHE THR VAL HIS THR LYS THR SEQRES 4 B 166 THR LEU SER THR PHE GLN SER PRO GLU PHE SER VAL THR SEQRES 5 B 166 ARG GLN HIS GLU ASP PHE VAL TRP LEU HIS ASP THR LEU SEQRES 6 B 166 THR GLU THR THR ASP TYR ALA GLY LEU ILE ILE PRO PRO SEQRES 7 B 166 ALA PRO THR LYS PRO ASP PHE ASP GLY PRO ARG GLU LYS SEQRES 8 B 166 MET GLN LYS LEU GLY GLU GLY GLU GLY SER MET THR LYS SEQRES 9 B 166 GLU GLU PHE ALA LYS MET LYS GLN GLU LEU GLU ALA GLU SEQRES 10 B 166 TYR LEU ALA VAL PHE LYS LYS THR VAL SER THR HIS GLU SEQRES 11 B 166 VAL PHE LEU GLN ARG LEU SER SER HIS PRO VAL LEU SER SEQRES 12 B 166 LYS ASP ARG ASN PHE HIS VAL PHE LEU GLU TYR ASP GLN SEQRES 13 B 166 ASP LEU SER VAL ARG ARG LYS ASN THR LYS SEQRES 1 C 166 GLY PRO SER SER PRO SER VAL SER VAL ASP LEU ASN VAL SEQRES 2 C 166 ASP PRO SER LEU GLN ILE ASP ILE PRO ASP ALA LEU SER SEQRES 3 C 166 GLU ARG ASP LYS VAL LYS PHE THR VAL HIS THR LYS THR SEQRES 4 C 166 THR LEU SER THR PHE GLN SER PRO GLU PHE SER VAL THR SEQRES 5 C 166 ARG GLN HIS GLU ASP PHE VAL TRP LEU HIS ASP THR LEU SEQRES 6 C 166 THR GLU THR THR ASP TYR ALA GLY LEU ILE ILE PRO PRO SEQRES 7 C 166 ALA PRO THR LYS PRO ASP PHE ASP GLY PRO ARG GLU LYS SEQRES 8 C 166 MET GLN LYS LEU GLY GLU GLY GLU GLY SER MET THR LYS SEQRES 9 C 166 GLU GLU PHE ALA LYS MET LYS GLN GLU LEU GLU ALA GLU SEQRES 10 C 166 TYR LEU ALA VAL PHE LYS LYS THR VAL SER THR HIS GLU SEQRES 11 C 166 VAL PHE LEU GLN ARG LEU SER SER HIS PRO VAL LEU SER SEQRES 12 C 166 LYS ASP ARG ASN PHE HIS VAL PHE LEU GLU TYR ASP GLN SEQRES 13 C 166 ASP LEU SER VAL ARG ARG LYS ASN THR LYS SEQRES 1 D 166 GLY PRO SER SER PRO SER VAL SER VAL ASP LEU ASN VAL SEQRES 2 D 166 ASP PRO SER LEU GLN ILE ASP ILE PRO ASP ALA LEU SER SEQRES 3 D 166 GLU ARG ASP LYS VAL LYS PHE THR VAL HIS THR LYS THR SEQRES 4 D 166 THR LEU SER THR PHE GLN SER PRO GLU PHE SER VAL THR SEQRES 5 D 166 ARG GLN HIS GLU ASP PHE VAL TRP LEU HIS ASP THR LEU SEQRES 6 D 166 THR GLU THR THR ASP TYR ALA GLY LEU ILE ILE PRO PRO SEQRES 7 D 166 ALA PRO THR LYS PRO ASP PHE ASP GLY PRO ARG GLU LYS SEQRES 8 D 166 MET GLN LYS LEU GLY GLU GLY GLU GLY SER MET THR LYS SEQRES 9 D 166 GLU GLU PHE ALA LYS MET LYS GLN GLU LEU GLU ALA GLU SEQRES 10 D 166 TYR LEU ALA VAL PHE LYS LYS THR VAL SER THR HIS GLU SEQRES 11 D 166 VAL PHE LEU GLN ARG LEU SER SER HIS PRO VAL LEU SER SEQRES 12 D 166 LYS ASP ARG ASN PHE HIS VAL PHE LEU GLU TYR ASP GLN SEQRES 13 D 166 ASP LEU SER VAL ARG ARG LYS ASN THR LYS SEQRES 1 P 25 PRO ALA ASN GLU PRO THR VAL GLN PHE PHE LYS GLY LYS SEQRES 2 P 25 ASN GLY SER ALA ASP LYS VAL ILE LEU VAL THR GLN SEQRES 1 Q 25 PRO ALA ASN GLU PRO THR VAL GLN PHE PHE LYS GLY LYS SEQRES 2 Q 25 ASN GLY SER ALA ASP LYS VAL ILE LEU VAL THR GLN SEQRES 1 R 25 PRO ALA ASN GLU PRO THR VAL GLN PHE PHE LYS GLY LYS SEQRES 2 R 25 ASN GLY SER ALA ASP LYS VAL ILE LEU VAL THR GLN SEQRES 1 S 25 PRO ALA ASN GLU PRO THR VAL GLN PHE PHE LYS GLY LYS SEQRES 2 S 25 ASN GLY SER ALA ASP LYS VAL ILE LEU VAL THR GLN FORMUL 9 HOH *252(H2 O) HELIX 1 AA1 HIS A 69 GLU A 81 1 13 HELIX 2 AA2 THR A 82 ALA A 86 5 5 HELIX 3 AA3 PHE A 99 GLY A 112 1 14 HELIX 4 AA4 GLU A 120 SER A 152 1 33 HELIX 5 AA5 VAL A 155 LYS A 158 5 4 HELIX 6 AA6 ASP A 159 TYR A 168 1 10 HELIX 7 AA7 HIS B 69 GLU B 81 1 13 HELIX 8 AA8 THR B 82 ALA B 86 5 5 HELIX 9 AA9 PHE B 99 GLY B 110 1 12 HELIX 10 AB1 GLY B 112 MET B 116 5 5 HELIX 11 AB2 THR B 117 HIS B 153 1 37 HELIX 12 AB3 VAL B 155 LYS B 158 5 4 HELIX 13 AB4 ASP B 159 TYR B 168 1 10 HELIX 14 AB5 LEU B 172 LYS B 177 1 6 HELIX 15 AB6 HIS C 69 THR C 82 1 14 HELIX 16 AB7 THR C 83 ALA C 86 5 4 HELIX 17 AB8 PHE C 99 GLU C 104 1 6 HELIX 18 AB9 LYS C 105 GLY C 112 1 8 HELIX 19 AC1 THR C 117 ALA C 122 1 6 HELIX 20 AC2 ALA C 122 HIS C 153 1 32 HELIX 21 AC3 VAL C 155 LYS C 158 5 4 HELIX 22 AC4 ASP C 159 TYR C 168 1 10 HELIX 23 AC5 VAL C 174 THR C 179 1 6 HELIX 24 AC6 HIS D 69 GLU D 81 1 13 HELIX 25 AC7 THR D 82 ALA D 86 5 5 HELIX 26 AC8 PHE D 99 GLY D 110 1 12 HELIX 27 AC9 THR D 117 SER D 152 1 36 HELIX 28 AD1 VAL D 155 LYS D 158 5 4 HELIX 29 AD2 ASP D 159 TYR D 168 1 10 HELIX 30 AD3 LEU D 172 LYS D 177 1 6 HELIX 31 AD4 GLY S 119 SER S 123 5 5 SHEET 1 AA1 3 LEU A 31 ASP A 34 0 SHEET 2 AA1 3 LYS A 44 THR A 53 -1 O LYS A 52 N GLN A 32 SHEET 3 AA1 3 GLU A 62 GLN A 68 -1 O ARG A 67 N PHE A 47 SHEET 1 AA2 5 LEU A 31 ASP A 34 0 SHEET 2 AA2 5 LYS A 44 THR A 53 -1 O LYS A 52 N GLN A 32 SHEET 3 AA2 5 ASP A 37 GLU A 41 -1 N LEU A 39 O LYS A 46 SHEET 4 AA2 5 THR P 113 PHE P 117 -1 O PHE P 116 N ALA A 38 SHEET 5 AA2 5 LYS P 126 LEU P 129 -1 O ILE P 128 N GLN P 115 SHEET 1 AA3 3 LEU B 31 ASP B 34 0 SHEET 2 AA3 3 VAL B 45 THR B 53 -1 O HIS B 50 N ASP B 34 SHEET 3 AA3 3 GLU B 62 GLN B 68 -1 O ARG B 67 N PHE B 47 SHEET 1 AA4 5 LEU B 31 ASP B 34 0 SHEET 2 AA4 5 VAL B 45 THR B 53 -1 O HIS B 50 N ASP B 34 SHEET 3 AA4 5 ASP B 37 SER B 40 -1 N LEU B 39 O LYS B 46 SHEET 4 AA4 5 VAL Q 114 PHE Q 117 -1 O PHE Q 116 N ALA B 38 SHEET 5 AA4 5 LYS Q 126 LEU Q 129 -1 O LYS Q 126 N PHE Q 117 SHEET 1 AA5 3 LEU C 31 ASP C 34 0 SHEET 2 AA5 3 LYS C 44 THR C 53 -1 O LYS C 52 N GLN C 32 SHEET 3 AA5 3 GLU C 62 GLN C 68 -1 O ARG C 67 N PHE C 47 SHEET 1 AA6 5 LEU C 31 ASP C 34 0 SHEET 2 AA6 5 LYS C 44 THR C 53 -1 O LYS C 52 N GLN C 32 SHEET 3 AA6 5 ASP C 37 GLU C 41 -1 N LEU C 39 O LYS C 46 SHEET 4 AA6 5 THR R 113 PHE R 117 -1 O PHE R 116 N ALA C 38 SHEET 5 AA6 5 LYS R 126 VAL R 130 -1 O ILE R 128 N GLN R 115 SHEET 1 AA7 3 LEU D 31 ASP D 34 0 SHEET 2 AA7 3 LYS D 44 THR D 53 -1 O LYS D 52 N GLN D 32 SHEET 3 AA7 3 GLU D 62 GLN D 68 -1 O ARG D 67 N PHE D 47 SHEET 1 AA8 5 LEU D 31 ASP D 34 0 SHEET 2 AA8 5 LYS D 44 THR D 53 -1 O LYS D 52 N GLN D 32 SHEET 3 AA8 5 ASP D 37 GLU D 41 -1 N LEU D 39 O LYS D 46 SHEET 4 AA8 5 VAL S 114 PHE S 117 -1 O VAL S 114 N SER D 40 SHEET 5 AA8 5 LYS S 126 LEU S 129 -1 O ILE S 128 N GLN S 115 CRYST1 36.730 110.100 86.130 90.00 90.34 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027226 0.000000 0.000162 0.00000 SCALE2 0.000000 0.009083 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011611 0.00000