HEADER TRANSFERASE/TRANSFERASE INHIBITOR 28-OCT-16 5TS8 TITLE Z. MAYS CK2 KINASE ALPHA SUBUNIT IN COMPLEX WITH THE ATP-COMPETITIVE TITLE 2 INHIBITOR 5,6-DIBROMOBENZOTRIAZOLE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN KINASE CK2 CATALYTIC SUBUNIT CK2 ALPHA-3; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZEA MAYS; SOURCE 3 ORGANISM_TAXID: 4577; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS CK2, CASEIN KINASE 2, INHIBITOR, BROMO-BENZOTRIAZOLE, TRANSFERASE- KEYWDS 2 TRANSFERASE INHIBITOR COMPLEX, HALOGEN BOND, TRANSFERASE/TRANSFERASE KEYWDS 3 INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR M.WINIEWSKA,K.KUCINSKA,H.CZAPINSKA,A.PIASECKA,M.BOCHTLER,J.POZNANSKI REVDAT 2 17-JAN-24 5TS8 1 REMARK REVDAT 1 17-JAN-18 5TS8 0 JRNL AUTH M.WINIEWSKA,K.KUCINSKA,H.CZAPINSKA,A.PIASECKA,M.BOCHTLER, JRNL AUTH 2 J.POZNANSKI JRNL TITL STRUCTURAL AND THERMODYNAMIC ANALYSIS OF JRNL TITL 2 5,6-DIBROMOBENZOTRIAZOLE BINDING TO CASEIN KINASE 2 ALPHA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.WINIEWSKA,K.KUCINSKA,M.MAKOWSKA,J.POZNANSKI,D.SHUGAR REMARK 1 TITL THERMODYNAMICS PARAMETERS FOR BINDING OF HALOGENATED REMARK 1 TITL 2 BENZOTRIAZOLE INHIBITORS OF HUMAN PROTEIN KINASE CK2ALPHA. REMARK 1 REF BIOCHIM. BIOPHYS. ACTA V.1854 1708 2015 REMARK 1 REFN ISSN 0006-3002 REMARK 1 PMID 25891901 REMARK 1 DOI 10.1016/J.BBAPAP.2015.04.004 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.WINIEWSKA,M.MAKOWSKA,P.MAJ,M.WIELECHOWSKA,M.BRETNER, REMARK 1 AUTH 2 J.POZNANSKI,D.SHUGAR REMARK 1 TITL THERMODYNAMIC PARAMETERS FOR BINDING OF SOME HALOGENATED REMARK 1 TITL 2 INHIBITORS OF HUMAN PROTEIN KINASE CK2. REMARK 1 REF BIOCHEM. BIOPHYS. RES. V. 456 282 2015 REMARK 1 REF 2 COMMUN. REMARK 1 REFN ESSN 1090-2104 REMARK 1 PMID 25450618 REMARK 1 DOI 10.1016/J.BBRC.2014.11.072 REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 57482 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.150 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.169 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2923 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3952 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.11 REMARK 3 BIN R VALUE (WORKING SET) : 0.3370 REMARK 3 BIN FREE R VALUE SET COUNT : 183 REMARK 3 BIN FREE R VALUE : 0.3270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2774 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 453 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.76000 REMARK 3 B22 (A**2) : -0.90000 REMARK 3 B33 (A**2) : 1.66000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.066 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.065 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.047 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.551 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.976 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.971 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3460 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3287 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4729 ; 1.454 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7610 ; 0.972 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 437 ; 5.425 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 176 ;34.199 ;24.034 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 636 ;13.206 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;18.418 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 483 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4102 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 843 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1607 ; 1.317 ; 1.841 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1607 ; 1.317 ; 1.841 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2082 ; 2.209 ; 2.748 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2083 ; 2.208 ; 2.752 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1853 ; 1.532 ; 2.096 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1853 ; 1.531 ; 2.096 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2645 ; 2.589 ; 3.041 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4411 ; 5.964 ;15.954 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4156 ; 5.489 ;14.970 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 338 REMARK 3 RESIDUE RANGE : A 401 A 410 REMARK 3 ORIGIN FOR THE GROUP (A): 14.1582 13.1883 27.5611 REMARK 3 T TENSOR REMARK 3 T11: 0.0040 T22: 0.0086 REMARK 3 T33: 0.0082 T12: -0.0032 REMARK 3 T13: -0.0024 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 0.2781 L22: 0.2046 REMARK 3 L33: 0.0403 L12: 0.0317 REMARK 3 L13: 0.0458 L23: 0.0765 REMARK 3 S TENSOR REMARK 3 S11: 0.0112 S12: -0.0350 S13: 0.0007 REMARK 3 S21: -0.0086 S22: -0.0188 S23: 0.0273 REMARK 3 S31: -0.0056 S32: -0.0060 S33: 0.0076 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 TLS HAS BEEN USED AND U VALUES GENERATED WITH TLS CONTRIBUTION REMARK 3 ADDED. REMARK 3 DIFFERENCE DENSITY NEXT TO THE OH OXYGEN ATOM OF TYR257 AND TYR26 REMARK 3 MIGHT INDICATE THE X-RAY RADIATION INDUCED HYDROPEROXIDE REMARK 3 FORMATION. REMARK 3 THE COMPLICATED COMPOSITION OF THE CRYSTALLIZATION BUFFER REMARK 3 PRECLUDED UNAMBIGUOUS IDENTIFICATION OF THE LIGANDS. IN SOME CASES REMARK 3 MIXTURES OF DIFFERENT COMPOUNDS ARE POSSIBLE EG REMARK 3 TARTRATE, OXAMATE, ACETATE (AND DMSO), IN OTHER CASES THE LIGAND REMARK 3 IDENTITY COULD NOT BE GUESSED AND THE DIFFERENCE DENSITY COULD AT REMARK 3 BEST BE MODELLED AS A SET OF DISORDERED WATER MOLECULES. REMARK 4 REMARK 4 5TS8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1000217157. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9116 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60461 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 51.960 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 3.230 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : 0.04800 REMARK 200 FOR THE DATA SET : 14.1900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.78 REMARK 200 R MERGE FOR SHELL (I) : 0.55000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.810 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP, ARP/WARP REMARK 200 STARTING MODEL: 4RLK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.5 (1M SODIUM HEPES; MOPS), 40% REMARK 280 V/V PEG 500* MME; 20 % W/V PEG 20K; 0.2M SODIUM FORMATE; 0.2M REMARK 280 AMMONIUM ACETATE; 0.2M SODIUM CITRATE TRIBASIC DIHYDRATE; 0.2M REMARK 280 SODIUM POTASSIUM TARTRATE TETRAHYDRATE; 0.2M SODIUM OXAMATE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.15550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.69250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.86300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.69250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.15550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.86300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 THE ACTIVE FORM OF THE PROTEIN KINASE CK2 IS HETEROTETRAMERIC AND REMARK 400 COMPOSED OF TWO ALPHA SUBUNITS AND TWO BETA SUBUNITS. THE CRYSTAL REMARK 400 STRUCTURE COMPRISES ONE ALPHA SUBUNIT ONLY. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 6 REMARK 465 GLU A 339 REMARK 465 HIS A 340 REMARK 465 HIS A 341 REMARK 465 HIS A 342 REMARK 465 HIS A 343 REMARK 465 HIS A 344 REMARK 465 HIS A 345 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 338 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 120 124.09 -35.82 REMARK 500 ASP A 156 46.02 -149.90 REMARK 500 ARG A 169 43.51 39.95 REMARK 500 ARG A 169 45.25 39.95 REMARK 500 ASP A 175 75.74 53.55 REMARK 500 ALA A 193 -172.72 60.43 REMARK 500 ALA A 193 170.16 76.16 REMARK 500 ASP A 208 56.56 -93.40 REMARK 500 TYR A 234 71.23 -114.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 7M0 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TLA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BME A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TLA A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 410 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4RKL RELATED DB: PDB REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1J91 RELATED DB: PDB REMARK 900 RELATED ID: 1DAW RELATED DB: PDB REMARK 900 RELATED ID: 4KWP RELATED DB: PDB REMARK 900 RELATED ID: 1P5E RELATED DB: PDB REMARK 900 RELATED ID: 2OXY RELATED DB: PDB DBREF 5TS8 A 6 337 UNP Q9FQF5 Q9FQF5_MAIZE 1 332 SEQADV 5TS8 LEU A 338 UNP Q9FQF5 EXPRESSION TAG SEQADV 5TS8 GLU A 339 UNP Q9FQF5 EXPRESSION TAG SEQADV 5TS8 HIS A 340 UNP Q9FQF5 EXPRESSION TAG SEQADV 5TS8 HIS A 341 UNP Q9FQF5 EXPRESSION TAG SEQADV 5TS8 HIS A 342 UNP Q9FQF5 EXPRESSION TAG SEQADV 5TS8 HIS A 343 UNP Q9FQF5 EXPRESSION TAG SEQADV 5TS8 HIS A 344 UNP Q9FQF5 EXPRESSION TAG SEQADV 5TS8 HIS A 345 UNP Q9FQF5 EXPRESSION TAG SEQRES 1 A 340 MET SER LYS ALA ARG VAL TYR THR ASP VAL ASN VAL LEU SEQRES 2 A 340 ARG PRO LYS GLU TYR TRP ASP TYR GLU ALA LEU THR VAL SEQRES 3 A 340 GLN TRP GLY GLU GLN ASP ASN TYR GLU VAL VAL ARG LYS SEQRES 4 A 340 VAL GLY ARG GLY LYS TYR SER GLU VAL PHE GLU GLY ILE SEQRES 5 A 340 ASN VAL ASN ASN ASN GLU LYS CYS ILE ILE LYS ILE LEU SEQRES 6 A 340 LYS PRO VAL LYS LYS LYS LYS ILE LYS ARG GLU ILE LYS SEQRES 7 A 340 ILE LEU GLN ASN LEU TYR GLY GLY PRO ASN ILE VAL LYS SEQRES 8 A 340 LEU LEU ASP ILE VAL ARG ASP GLN HIS SER LYS THR PRO SEQRES 9 A 340 SER LEU ILE PHE GLU TYR VAL ASN ASN THR ASP PHE LYS SEQRES 10 A 340 VAL LEU TYR PRO THR LEU THR ASP TYR ASP ILE ARG TYR SEQRES 11 A 340 TYR ILE TYR GLU LEU LEU LYS ALA LEU ASP TYR CYS HIS SEQRES 12 A 340 SER GLN GLY ILE MET HIS ARG ASP VAL LYS PRO HIS ASN SEQRES 13 A 340 VAL MET ILE ASP HIS GLU LEU ARG LYS LEU ARG LEU ILE SEQRES 14 A 340 ASP TRP GLY LEU ALA GLU PHE TYR HIS PRO GLY LYS GLU SEQRES 15 A 340 TYR ASN VAL ARG VAL ALA SER ARG TYR PHE LYS GLY PRO SEQRES 16 A 340 GLU LEU LEU VAL ASP LEU GLN ASP TYR ASP TYR SER LEU SEQRES 17 A 340 ASP MET TRP SER LEU GLY CYS MET PHE ALA GLY MET ILE SEQRES 18 A 340 PHE ARG LYS GLU PRO PHE PHE TYR GLY HIS ASP ASN HIS SEQRES 19 A 340 ASP GLN LEU VAL LYS ILE ALA LYS VAL LEU GLY THR ASP SEQRES 20 A 340 GLY LEU ASN VAL TYR LEU ASN LYS TYR ARG ILE GLU LEU SEQRES 21 A 340 ASP PRO GLN LEU GLU ALA LEU VAL GLY ARG HIS SER ARG SEQRES 22 A 340 LYS PRO TRP THR LYS PHE ILE ASN ALA ASP ASN GLN HIS SEQRES 23 A 340 LEU VAL SER HIS GLU ALA ILE ASP PHE LEU ASP LYS LEU SEQRES 24 A 340 LEU ARG TYR ASP HIS GLN ASP ARG LEU THR ALA ARG GLU SEQRES 25 A 340 ALA MET THR HIS PRO TYR PHE GLN GLN VAL ARG ALA ALA SEQRES 26 A 340 GLU ASN SER THR THR ARG ALA LEU GLU HIS HIS HIS HIS SEQRES 27 A 340 HIS HIS HET 7M0 A 401 22 HET TLA A 402 10 HET FMT A 403 3 HET DMS A 404 4 HET ACT A 405 4 HET EDO A 406 4 HET BME A 407 4 HET TLA A 408 10 HET GOL A 409 6 HET EDO A 410 8 HETNAM 7M0 5,6-DIBROMOBENZOTRIAZOLE HETNAM TLA L(+)-TARTARIC ACID HETNAM FMT FORMIC ACID HETNAM DMS DIMETHYL SULFOXIDE HETNAM ACT ACETATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM BME BETA-MERCAPTOETHANOL HETNAM GOL GLYCEROL HETSYN 7M0 DIBROMO-2-BENZOTRIAZOLE HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 7M0 C6 H3 BR2 N3 FORMUL 3 TLA 2(C4 H6 O6) FORMUL 4 FMT C H2 O2 FORMUL 5 DMS C2 H6 O S FORMUL 6 ACT C2 H3 O2 1- FORMUL 7 EDO 2(C2 H6 O2) FORMUL 8 BME C2 H6 O S FORMUL 10 GOL C3 H8 O3 FORMUL 12 HOH *453(H2 O) HELIX 1 AA1 ASP A 14 ARG A 19 5 6 HELIX 2 AA2 PRO A 20 ASP A 25 1 6 HELIX 3 AA3 TYR A 26 LEU A 29 5 4 HELIX 4 AA4 GLU A 35 ASP A 37 5 3 HELIX 5 AA5 LYS A 74 TYR A 89 1 16 HELIX 6 AA6 ASP A 120 TYR A 125 1 6 HELIX 7 AA7 PRO A 126 LEU A 128 5 3 HELIX 8 AA8 THR A 129 GLN A 150 1 22 HELIX 9 AA9 LYS A 158 HIS A 160 5 3 HELIX 10 AB1 SER A 194 LYS A 198 5 5 HELIX 11 AB2 GLY A 199 VAL A 204 1 6 HELIX 12 AB3 TYR A 211 ARG A 228 1 18 HELIX 13 AB4 ASP A 237 GLY A 250 1 14 HELIX 14 AB5 GLY A 250 TYR A 261 1 12 HELIX 15 AB6 ASP A 266 GLY A 274 1 9 HELIX 16 AB7 PRO A 280 ILE A 285 5 6 HELIX 17 AB8 ASN A 289 VAL A 293 5 5 HELIX 18 AB9 SER A 294 LEU A 305 1 12 HELIX 19 AC1 ASP A 308 ARG A 312 5 5 HELIX 20 AC2 THR A 314 THR A 320 1 7 HELIX 21 AC3 HIS A 321 TYR A 323 5 3 HELIX 22 AC4 PHE A 324 LEU A 338 1 15 SHEET 1 AA1 5 TYR A 39 ARG A 47 0 SHEET 2 AA1 5 SER A 51 ASN A 58 -1 O GLU A 55 N VAL A 42 SHEET 3 AA1 5 LYS A 64 LEU A 70 -1 O ILE A 67 N PHE A 54 SHEET 4 AA1 5 PRO A 109 GLU A 114 -1 O LEU A 111 N LYS A 68 SHEET 5 AA1 5 LEU A 97 ARG A 102 -1 N VAL A 101 O SER A 110 SHEET 1 AA2 2 ILE A 152 MET A 153 0 SHEET 2 AA2 2 GLU A 180 PHE A 181 -1 O GLU A 180 N MET A 153 SHEET 1 AA3 2 VAL A 162 ASP A 165 0 SHEET 2 AA3 2 LYS A 170 LEU A 173 -1 O ARG A 172 N MET A 163 CISPEP 1 GLU A 230 PRO A 231 0 -7.87 CISPEP 2 GLU A 230 PRO A 231 0 -5.38 SITE 1 AC1 14 VAL A 53 ILE A 66 LYS A 68 VAL A 95 SITE 2 AC1 14 PHE A 113 GLU A 114 VAL A 116 ILE A 174 SITE 3 AC1 14 ASP A 175 HOH A 567 HOH A 607 HOH A 641 SITE 4 AC1 14 HOH A 716 HOH A 837 SITE 1 AC2 8 ARG A 80 ARG A 155 GLU A 180 LYS A 186 SITE 2 AC2 8 TYR A 188 ASN A 189 HOH A 572 HOH A 670 SITE 1 AC3 8 VAL A 95 LYS A 96 GLU A 114 VAL A 116 SITE 2 AC3 8 ARG A 172 HOH A 551 HOH A 666 HOH A 672 SITE 1 AC4 7 ARG A 278 PRO A 280 TRP A 281 THR A 282 SITE 2 AC4 7 ACT A 405 HOH A 503 HOH A 557 SITE 1 AC5 6 ARG A 278 PRO A 280 TRP A 281 THR A 282 SITE 2 AC5 6 DMS A 404 HOH A 503 SITE 1 AC6 4 TYR A 89 HIS A 291 HOH A 536 HOH A 688 SITE 1 AC7 2 HOH A 501 HOH A 522 SITE 1 AC8 9 VAL A 45 TYR A 115 ASN A 117 ASN A 118 SITE 2 AC8 9 HOH A 576 HOH A 673 HOH A 787 HOH A 804 SITE 3 AC8 9 HOH A 837 SITE 1 AC9 11 ASP A 130 ARG A 134 GLN A 290 HIS A 291 SITE 2 AC9 11 VAL A 293 HOH A 541 HOH A 807 HOH A 832 SITE 3 AC9 11 HOH A 887 HOH A 897 HOH A 951 SITE 1 AD1 5 VAL A 293 HIS A 295 ILE A 298 HOH A 562 SITE 2 AD1 5 HOH A 616 CRYST1 54.311 59.726 105.385 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018412 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016743 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009489 0.00000