HEADER LIGASE 01-NOV-16 5TT6 TITLE T4 RNA LIGASE 1 (K99M) COMPND MOL_ID: 1; COMPND 2 MOLECULE: T4 RNA LIGASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GENE PRODUCT 63,GP63,RNL1; COMPND 5 EC: 6.5.1.3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE T4; SOURCE 3 ORGANISM_TAXID: 10665; SOURCE 4 GENE: 63; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS METAL CATALYSIS, COVALENT NUCLEOTIDYLTRANSFERASE, LYSYL-AMP, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.GOLDGUR,M.-C.UNCIULEAC,S.H.SHUMAN REVDAT 3 04-OCT-23 5TT6 1 LINK REVDAT 2 22-MAR-17 5TT6 1 JRNL REVDAT 1 08-MAR-17 5TT6 0 JRNL AUTH M.C.UNCIULEAC,Y.GOLDGUR,S.SHUMAN JRNL TITL TWO-METAL VERSUS ONE-METAL MECHANISMS OF LYSINE JRNL TITL 2 ADENYLYLATION BY ATP-DEPENDENT AND NAD(+)-DEPENDENT JRNL TITL 3 POLYNUCLEOTIDE LIGASES. JRNL REF PROC. NATL. ACAD. SCI. V. 114 2592 2017 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 28223499 JRNL DOI 10.1073/PNAS.1619220114 REMARK 2 REMARK 2 RESOLUTION. 2.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.7 REMARK 3 NUMBER OF REFLECTIONS : 19221 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1932 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.5193 - 5.2693 0.92 1359 154 0.1754 0.2179 REMARK 3 2 5.2693 - 4.1832 0.93 1318 147 0.1612 0.2058 REMARK 3 3 4.1832 - 3.6546 0.95 1317 146 0.1604 0.2482 REMARK 3 4 3.6546 - 3.3205 0.95 1334 145 0.1774 0.2723 REMARK 3 5 3.3205 - 3.0826 0.95 1326 150 0.1842 0.2329 REMARK 3 6 3.0826 - 2.9009 0.94 1324 145 0.1962 0.3064 REMARK 3 7 2.9009 - 2.7556 0.94 1303 145 0.2168 0.3013 REMARK 3 8 2.7556 - 2.6357 0.94 1292 145 0.2314 0.3407 REMARK 3 9 2.6357 - 2.5342 0.94 1321 131 0.2218 0.3175 REMARK 3 10 2.5342 - 2.4468 0.92 1252 161 0.2312 0.3228 REMARK 3 11 2.4468 - 2.3703 0.89 1209 126 0.2421 0.2938 REMARK 3 12 2.3703 - 2.3025 0.80 1110 131 0.2420 0.2880 REMARK 3 13 2.3025 - 2.2419 0.76 1042 113 0.2325 0.2931 REMARK 3 14 2.2419 - 2.1872 0.57 782 93 0.2393 0.3629 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3166 REMARK 3 ANGLE : 1.053 4270 REMARK 3 CHIRALITY : 0.055 446 REMARK 3 PLANARITY : 0.006 547 REMARK 3 DIHEDRAL : 19.376 1904 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 15.9946 13.0258 24.3300 REMARK 3 T TENSOR REMARK 3 T11: 0.3374 T22: 0.1788 REMARK 3 T33: 0.3436 T12: 0.0222 REMARK 3 T13: 0.1199 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 1.1390 L22: 0.9041 REMARK 3 L33: 2.1230 L12: -0.0041 REMARK 3 L13: -0.3476 L23: 0.1190 REMARK 3 S TENSOR REMARK 3 S11: 0.0500 S12: 0.2046 S13: 0.0106 REMARK 3 S21: 0.4030 S22: -0.0483 S23: 0.3277 REMARK 3 S31: 0.0140 S32: -0.1916 S33: 0.0121 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5TT6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1000224772. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97920 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19235 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.1 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.25 REMARK 200 COMPLETENESS FOR SHELL (%) : 69.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.43800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2C5U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MGCL2, 16% PEG3350, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 53.64650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 19.98000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 53.64650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 19.98000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 SER A -7 REMARK 465 SER A -6 REMARK 465 HIS A -5 REMARK 465 ILE A -4 REMARK 465 GLU A -3 REMARK 465 GLY A -2 REMARK 465 ARG A -1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 146 O HOH A 501 1.89 REMARK 500 O ARG A 141 O HOH A 502 1.90 REMARK 500 OD2 ASP A 193 O HOH A 503 1.94 REMARK 500 N ASP A 349 NZ LYS A 353 2.02 REMARK 500 OE1 GLU A 63 O HOH A 504 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 148 O HOH A 583 4556 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 14 -72.27 -57.10 REMARK 500 LYS A 18 -112.35 -98.79 REMARK 500 CYS A 53 50.83 -95.96 REMARK 500 ARG A 67 147.05 -171.13 REMARK 500 ILE A 167 -79.61 -107.76 REMARK 500 SER A 213 153.62 170.12 REMARK 500 ASP A 349 -99.60 -64.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 272 OD2 REMARK 620 2 ATP A 403 O2G 90.0 REMARK 620 3 ATP A 403 O1B 168.2 90.4 REMARK 620 4 HOH A 522 O 73.1 89.5 95.1 REMARK 620 5 HOH A 531 O 95.2 101.1 96.3 164.3 REMARK 620 6 HOH A 536 O 88.2 174.7 90.3 85.2 84.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A 403 O2A REMARK 620 2 HOH A 507 O 78.3 REMARK 620 3 HOH A 508 O 75.3 98.6 REMARK 620 4 HOH A 509 O 169.1 90.8 105.8 REMARK 620 5 HOH A 535 O 92.8 80.5 167.9 86.3 REMARK 620 6 HOH A 561 O 88.8 167.0 79.5 102.1 98.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP A 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5TT5 RELATED DB: PDB DBREF 5TT6 A 1 374 UNP P00971 RLIG_BPT4 1 374 SEQADV 5TT6 MET A -19 UNP P00971 INITIATING METHIONINE SEQADV 5TT6 GLY A -18 UNP P00971 EXPRESSION TAG SEQADV 5TT6 HIS A -17 UNP P00971 EXPRESSION TAG SEQADV 5TT6 HIS A -16 UNP P00971 EXPRESSION TAG SEQADV 5TT6 HIS A -15 UNP P00971 EXPRESSION TAG SEQADV 5TT6 HIS A -14 UNP P00971 EXPRESSION TAG SEQADV 5TT6 HIS A -13 UNP P00971 EXPRESSION TAG SEQADV 5TT6 HIS A -12 UNP P00971 EXPRESSION TAG SEQADV 5TT6 HIS A -11 UNP P00971 EXPRESSION TAG SEQADV 5TT6 HIS A -10 UNP P00971 EXPRESSION TAG SEQADV 5TT6 HIS A -9 UNP P00971 EXPRESSION TAG SEQADV 5TT6 HIS A -8 UNP P00971 EXPRESSION TAG SEQADV 5TT6 SER A -7 UNP P00971 EXPRESSION TAG SEQADV 5TT6 SER A -6 UNP P00971 EXPRESSION TAG SEQADV 5TT6 HIS A -5 UNP P00971 EXPRESSION TAG SEQADV 5TT6 ILE A -4 UNP P00971 EXPRESSION TAG SEQADV 5TT6 GLU A -3 UNP P00971 EXPRESSION TAG SEQADV 5TT6 GLY A -2 UNP P00971 EXPRESSION TAG SEQADV 5TT6 ARG A -1 UNP P00971 EXPRESSION TAG SEQADV 5TT6 HIS A 0 UNP P00971 EXPRESSION TAG SEQADV 5TT6 MET A 99 UNP P00971 LYS 99 ENGINEERED MUTATION SEQRES 1 A 394 MET GLY HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS SER SEQRES 2 A 394 SER HIS ILE GLU GLY ARG HIS MET GLN GLU LEU PHE ASN SEQRES 3 A 394 ASN LEU MET GLU LEU CYS LYS ASP SER GLN ARG LYS PHE SEQRES 4 A 394 PHE TYR SER ASP ASP VAL SER ALA SER GLY ARG THR TYR SEQRES 5 A 394 ARG ILE PHE SER TYR ASN TYR ALA SER TYR SER ASP TRP SEQRES 6 A 394 LEU LEU PRO ASP ALA LEU GLU CYS ARG GLY ILE MET PHE SEQRES 7 A 394 GLU MET ASP GLY GLU LYS PRO VAL ARG ILE ALA SER ARG SEQRES 8 A 394 PRO MET GLU LYS PHE PHE ASN LEU ASN GLU ASN PRO PHE SEQRES 9 A 394 THR MET ASN ILE ASP LEU ASN ASP VAL ASP TYR ILE LEU SEQRES 10 A 394 THR MET GLU ASP GLY SER LEU VAL SER THR TYR LEU ASP SEQRES 11 A 394 GLY ASP GLU ILE LEU PHE LYS SER LYS GLY SER ILE LYS SEQRES 12 A 394 SER GLU GLN ALA LEU MET ALA ASN GLY ILE LEU MET ASN SEQRES 13 A 394 ILE ASN HIS HIS ARG LEU ARG ASP ARG LEU LYS GLU LEU SEQRES 14 A 394 ALA GLU ASP GLY PHE THR ALA ASN PHE GLU PHE VAL ALA SEQRES 15 A 394 PRO THR ASN ARG ILE VAL LEU ALA TYR GLN GLU MET LYS SEQRES 16 A 394 ILE ILE LEU LEU ASN VAL ARG GLU ASN GLU THR GLY GLU SEQRES 17 A 394 TYR ILE SER TYR ASP ASP ILE TYR LYS ASP ALA THR LEU SEQRES 18 A 394 ARG PRO TYR LEU VAL GLU ARG TYR GLU ILE ASP SER PRO SEQRES 19 A 394 LYS TRP ILE GLU GLU ALA LYS ASN ALA GLU ASN ILE GLU SEQRES 20 A 394 GLY TYR VAL ALA VAL MET LYS ASP GLY SER HIS PHE LYS SEQRES 21 A 394 ILE LYS SER ASP TRP TYR VAL SER LEU HIS SER THR LYS SEQRES 22 A 394 SER SER LEU ASP ASN PRO GLU LYS LEU PHE LYS THR ILE SEQRES 23 A 394 ILE ASP GLY ALA SER ASP ASP LEU LYS ALA MET TYR ALA SEQRES 24 A 394 ASP ASP GLU TYR SER TYR ARG LYS ILE GLU ALA PHE GLU SEQRES 25 A 394 THR THR TYR LEU LYS TYR LEU ASP ARG ALA LEU PHE LEU SEQRES 26 A 394 VAL LEU ASP CYS HIS ASN LYS HIS CYS GLY LYS ASP ARG SEQRES 27 A 394 LYS THR TYR ALA MET GLU ALA GLN GLY VAL ALA LYS GLY SEQRES 28 A 394 ALA GLY MET ASP HIS LEU PHE GLY ILE ILE MET SER LEU SEQRES 29 A 394 TYR GLN GLY TYR ASP SER GLN GLU LYS VAL MET CYS GLU SEQRES 30 A 394 ILE GLU GLN ASN PHE LEU LYS ASN TYR LYS LYS PHE ILE SEQRES 31 A 394 PRO GLU GLY TYR HET MG A 401 1 HET MG A 402 1 HET ATP A 403 31 HETNAM MG MAGNESIUM ION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE FORMUL 2 MG 2(MG 2+) FORMUL 4 ATP C10 H16 N5 O13 P3 FORMUL 5 HOH *93(H2 O) HELIX 1 AA1 HIS A 0 CYS A 12 1 13 HELIX 2 AA2 SER A 43 LEU A 47 5 5 HELIX 3 AA3 ASP A 49 CYS A 53 5 5 HELIX 4 AA4 ASN A 82 MET A 86 5 5 HELIX 5 AA5 ASP A 89 ASN A 91 5 3 HELIX 6 AA6 SER A 124 ASN A 136 1 13 HELIX 7 AA7 HIS A 139 ASP A 152 1 14 HELIX 8 AA8 ALA A 162 ARG A 166 5 5 HELIX 9 AA9 SER A 191 ASP A 198 1 8 HELIX 10 AB1 LEU A 201 LEU A 205 5 5 HELIX 11 AB2 LYS A 215 ALA A 223 1 9 HELIX 12 AB3 SER A 243 SER A 251 1 9 HELIX 13 AB4 ASN A 258 ASP A 268 1 11 HELIX 14 AB5 ALA A 270 TYR A 278 1 9 HELIX 15 AB6 ASP A 281 CYS A 314 1 34 HELIX 16 AB7 ASP A 317 ALA A 332 1 16 HELIX 17 AB8 HIS A 336 LEU A 344 1 9 HELIX 18 AB9 SER A 350 ASN A 365 1 16 HELIX 19 AC1 TYR A 366 ILE A 370 5 5 SHEET 1 AA1 4 PHE A 19 VAL A 25 0 SHEET 2 AA1 4 THR A 31 TYR A 37 -1 O SER A 36 N PHE A 20 SHEET 3 AA1 4 MET A 57 ASP A 61 -1 O PHE A 58 N ARG A 33 SHEET 4 AA1 4 LYS A 64 SER A 70 -1 O VAL A 66 N GLU A 59 SHEET 1 AA2 4 ARG A 208 TYR A 209 0 SHEET 2 AA2 4 VAL A 93 THR A 98 -1 N ILE A 96 O TYR A 209 SHEET 3 AA2 4 GLY A 228 MET A 233 -1 O VAL A 232 N TYR A 95 SHEET 4 AA2 4 HIS A 238 LYS A 242 -1 O PHE A 239 N ALA A 231 SHEET 1 AA3 4 GLU A 113 SER A 118 0 SHEET 2 AA3 4 SER A 103 ASP A 110 -1 N ASP A 110 O GLU A 113 SHEET 3 AA3 4 PHE A 154 VAL A 161 -1 O PHE A 160 N SER A 103 SHEET 4 AA3 4 LYS A 175 GLU A 183 -1 O ARG A 182 N THR A 155 SSBOND 1 CYS A 314 CYS A 314 1555 2555 2.08 LINK OD2 ASP A 272 MG MG A 401 1555 1555 2.30 LINK MG MG A 401 O2G ATP A 403 1555 1555 1.83 LINK MG MG A 401 O1B ATP A 403 1555 1555 2.10 LINK MG MG A 401 O HOH A 522 1555 1555 1.97 LINK MG MG A 401 O HOH A 531 1555 1555 1.85 LINK MG MG A 401 O HOH A 536 1555 1555 2.20 LINK MG MG A 402 O2A ATP A 403 1555 1555 2.19 LINK MG MG A 402 O HOH A 507 1555 1555 2.12 LINK MG MG A 402 O HOH A 508 1555 1555 2.25 LINK MG MG A 402 O HOH A 509 1555 1555 2.22 LINK MG MG A 402 O HOH A 535 1555 1555 2.00 LINK MG MG A 402 O HOH A 561 1555 1555 2.36 SITE 1 AC1 5 ASP A 272 ATP A 403 HOH A 522 HOH A 531 SITE 2 AC1 5 HOH A 536 SITE 1 AC2 6 ATP A 403 HOH A 507 HOH A 508 HOH A 509 SITE 2 AC2 6 HOH A 535 HOH A 561 SITE 1 AC3 25 TYR A 37 ARG A 54 MET A 73 LYS A 75 SITE 2 AC3 25 LEU A 97 THR A 98 MET A 99 GLU A 100 SITE 3 AC3 25 LEU A 104 GLU A 159 LEU A 179 VAL A 230 SITE 4 AC3 25 LYS A 240 LYS A 242 ASP A 272 MG A 401 SITE 5 AC3 25 MG A 402 HOH A 507 HOH A 508 HOH A 522 SITE 6 AC3 25 HOH A 525 HOH A 531 HOH A 535 HOH A 536 SITE 7 AC3 25 HOH A 561 CRYST1 107.293 39.960 108.268 90.00 116.36 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009320 0.000000 0.004618 0.00000 SCALE2 0.000000 0.025025 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010308 0.00000