HEADER HYDROLASE 08-NOV-16 5TV7 TITLE 2.05 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF PEPTIDOGLYCAN-BINDING TITLE 2 PROTEIN FROM CLOSTRIDIOIDES DIFFICILE IN COMPLEX WITH GLUTAMINE TITLE 3 HYDROXAMATE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE PEPTIDOGLYCAN-BINDING/HYDROLYSING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PEPTOCLOSTRIDIUM DIFFICILE (STRAIN 630); SOURCE 3 ORGANISM_TAXID: 272563; SOURCE 4 STRAIN: 630; SOURCE 5 GENE: CD630_23880; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, PEPTIDOGLYCAN-BINDING PROTEIN, GLUTAMINE KEYWDS 3 HYDROXAMATE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,Z.WAWRZAK,L.SHUVALOVA,J.WINSOR,I.DUBROVSKA,S.GRIMSHAW, AUTHOR 2 K.KWON,W.F.ANDERSON,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS AUTHOR 3 DISEASES (CSGID) REVDAT 1 14-DEC-16 5TV7 0 JRNL AUTH G.MINASOV,Z.WAWRZAK,L.SHUVALOVA,J.WINSOR,I.DUBROVSKA, JRNL AUTH 2 S.GRIMSHAW,K.KWON,W.F.ANDERSON, JRNL AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 4 (CSGID) JRNL TITL 2.05 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF JRNL TITL 2 PEPTIDOGLYCAN-BINDING PROTEIN FROM CLOSTRIDIOIDES DIFFICILE JRNL TITL 3 IN COMPLEX WITH GLUTAMINE HYDROXAMATE. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 23265 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1199 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1627 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.11 REMARK 3 BIN R VALUE (WORKING SET) : 0.2790 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.2740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2460 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 201 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.25000 REMARK 3 B22 (A**2) : -2.90000 REMARK 3 B33 (A**2) : -0.98000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.15000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.170 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.151 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.123 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.416 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2600 ; 0.008 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2435 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3529 ; 1.313 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5648 ; 0.817 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 330 ; 2.636 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 111 ;23.864 ;25.676 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 434 ; 8.916 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ; 8.577 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 396 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2988 ; 0.022 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 558 ; 0.018 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1308 ; 1.444 ; 3.270 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1308 ; 1.441 ; 3.270 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1642 ; 2.425 ; 4.878 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1643 ; 2.425 ; 4.879 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1292 ; 1.642 ; 3.544 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1292 ; 1.637 ; 3.545 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1888 ; 2.715 ; 5.223 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2930 ; 6.114 ;40.019 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2895 ; 5.992 ;39.499 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 43 A 72 REMARK 3 ORIGIN FOR THE GROUP (A): 14.6075 44.3214 -1.0287 REMARK 3 T TENSOR REMARK 3 T11: 0.1412 T22: 0.1851 REMARK 3 T33: 0.1579 T12: 0.1157 REMARK 3 T13: 0.0222 T23: 0.1016 REMARK 3 L TENSOR REMARK 3 L11: 5.4448 L22: 4.7121 REMARK 3 L33: 5.6077 L12: -0.5683 REMARK 3 L13: 1.7513 L23: 1.4354 REMARK 3 S TENSOR REMARK 3 S11: 0.2524 S12: 0.5576 S13: 0.3723 REMARK 3 S21: -0.3654 S22: -0.1630 S23: 0.5880 REMARK 3 S31: -0.6740 S32: -0.5504 S33: -0.0894 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 73 A 93 REMARK 3 ORIGIN FOR THE GROUP (A): 13.1869 42.5863 -2.9373 REMARK 3 T TENSOR REMARK 3 T11: 0.0528 T22: 0.1573 REMARK 3 T33: 0.1742 T12: 0.0623 REMARK 3 T13: 0.0102 T23: 0.0828 REMARK 3 L TENSOR REMARK 3 L11: 5.0211 L22: 6.4933 REMARK 3 L33: 8.9519 L12: 0.9453 REMARK 3 L13: 0.8979 L23: 4.0166 REMARK 3 S TENSOR REMARK 3 S11: 0.0520 S12: 0.4062 S13: 0.3560 REMARK 3 S21: -0.2294 S22: 0.2147 S23: 0.6791 REMARK 3 S31: -0.5342 S32: -0.3500 S33: -0.2667 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 94 A 128 REMARK 3 ORIGIN FOR THE GROUP (A): 17.0825 37.8161 12.8014 REMARK 3 T TENSOR REMARK 3 T11: 0.0673 T22: 0.0644 REMARK 3 T33: 0.0597 T12: 0.0013 REMARK 3 T13: 0.0567 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 4.5984 L22: 6.4316 REMARK 3 L33: 2.5678 L12: -2.4190 REMARK 3 L13: -0.1164 L23: -1.1415 REMARK 3 S TENSOR REMARK 3 S11: 0.1136 S12: -0.1973 S13: 0.0520 REMARK 3 S21: 0.0764 S22: -0.1049 S23: 0.2160 REMARK 3 S31: -0.1368 S32: -0.1290 S33: -0.0087 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 129 A 200 REMARK 3 ORIGIN FOR THE GROUP (A): 26.5161 33.8730 4.3873 REMARK 3 T TENSOR REMARK 3 T11: 0.0097 T22: 0.0739 REMARK 3 T33: 0.0347 T12: -0.0076 REMARK 3 T13: 0.0125 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 2.7985 L22: 3.5549 REMARK 3 L33: 2.6670 L12: -0.0594 REMARK 3 L13: -0.9282 L23: 0.3397 REMARK 3 S TENSOR REMARK 3 S11: 0.0650 S12: 0.0964 S13: -0.0081 REMARK 3 S21: -0.0195 S22: -0.1034 S23: 0.0306 REMARK 3 S31: 0.0366 S32: -0.0218 S33: 0.0384 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 43 B 64 REMARK 3 ORIGIN FOR THE GROUP (A): 0.1453 15.0403 21.4529 REMARK 3 T TENSOR REMARK 3 T11: 0.1459 T22: 0.0205 REMARK 3 T33: 0.0945 T12: -0.0181 REMARK 3 T13: 0.0214 T23: -0.0415 REMARK 3 L TENSOR REMARK 3 L11: 9.3837 L22: 2.4407 REMARK 3 L33: 2.9015 L12: -1.0024 REMARK 3 L13: 2.6784 L23: 0.2356 REMARK 3 S TENSOR REMARK 3 S11: 0.0260 S12: 0.2898 S13: -0.8100 REMARK 3 S21: -0.3709 S22: -0.0141 S23: 0.1099 REMARK 3 S31: 0.2572 S32: -0.0553 S33: -0.0119 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 65 B 86 REMARK 3 ORIGIN FOR THE GROUP (A): -8.2470 24.2361 22.2298 REMARK 3 T TENSOR REMARK 3 T11: 0.1169 T22: 0.1255 REMARK 3 T33: 0.1047 T12: -0.0013 REMARK 3 T13: -0.0788 T23: -0.0298 REMARK 3 L TENSOR REMARK 3 L11: 9.9805 L22: 6.8422 REMARK 3 L33: 5.4437 L12: -3.9068 REMARK 3 L13: -0.2546 L23: -0.3927 REMARK 3 S TENSOR REMARK 3 S11: -0.0850 S12: 0.0741 S13: 0.2027 REMARK 3 S21: -0.2825 S22: 0.0527 S23: 0.4771 REMARK 3 S31: -0.2693 S32: -0.4516 S33: 0.0323 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 87 B 129 REMARK 3 ORIGIN FOR THE GROUP (A): 8.8263 22.0295 22.1866 REMARK 3 T TENSOR REMARK 3 T11: 0.1085 T22: 0.0885 REMARK 3 T33: 0.0337 T12: 0.0329 REMARK 3 T13: 0.0312 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 3.5787 L22: 4.6324 REMARK 3 L33: 3.6227 L12: 1.0971 REMARK 3 L13: -0.2584 L23: 0.8509 REMARK 3 S TENSOR REMARK 3 S11: 0.0212 S12: 0.1467 S13: -0.2253 REMARK 3 S21: -0.3159 S22: -0.1015 S23: 0.0088 REMARK 3 S31: 0.0925 S32: -0.0669 S33: 0.0803 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 130 B 200 REMARK 3 ORIGIN FOR THE GROUP (A): 5.6774 27.7360 32.8685 REMARK 3 T TENSOR REMARK 3 T11: 0.0609 T22: 0.0753 REMARK 3 T33: 0.0058 T12: -0.0040 REMARK 3 T13: 0.0111 T23: 0.0078 REMARK 3 L TENSOR REMARK 3 L11: 2.2545 L22: 3.4734 REMARK 3 L33: 3.2903 L12: -0.4691 REMARK 3 L13: -0.0267 L23: 0.3526 REMARK 3 S TENSOR REMARK 3 S11: 0.0327 S12: -0.0248 S13: 0.0150 REMARK 3 S21: -0.0450 S22: -0.1090 S23: 0.0040 REMARK 3 S31: -0.0268 S32: -0.0793 S33: 0.0763 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5TV7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1000224861. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : BERYLLIUM LENSES REMARK 200 OPTICS : C(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24487 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 29.080 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : 0.09300 REMARK 200 FOR THE DATA SET : 28.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.76900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.060 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 7.8 MG/ML, 0.25M SODIUM REMARK 280 CHLORIDE, 0.01M TRIS HCL (PH 8.3), SCREEN: JCSG+ (B3), 0.1M REMARK 280 BICINE (PH 8.5), 20% (W/V) PEG 6000., VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 67.47450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 17.50400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 67.47450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 17.50400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 23 REMARK 465 ASN A 24 REMARK 465 ALA A 25 REMARK 465 ASP A 26 REMARK 465 THR A 27 REMARK 465 SER A 28 REMARK 465 LYS A 29 REMARK 465 GLU A 30 REMARK 465 LYS A 31 REMARK 465 GLY A 32 REMARK 465 GLY A 33 REMARK 465 SER A 34 REMARK 465 LYS A 35 REMARK 465 GLU A 36 REMARK 465 THR A 37 REMARK 465 VAL A 38 REMARK 465 PRO A 39 REMARK 465 GLU A 40 REMARK 465 LYS A 41 REMARK 465 ASN A 42 REMARK 465 SER B 23 REMARK 465 ASN B 24 REMARK 465 ALA B 25 REMARK 465 ASP B 26 REMARK 465 THR B 27 REMARK 465 SER B 28 REMARK 465 LYS B 29 REMARK 465 GLU B 30 REMARK 465 LYS B 31 REMARK 465 GLY B 32 REMARK 465 GLY B 33 REMARK 465 SER B 34 REMARK 465 LYS B 35 REMARK 465 GLU B 36 REMARK 465 THR B 37 REMARK 465 VAL B 38 REMARK 465 PRO B 39 REMARK 465 GLU B 40 REMARK 465 LYS B 41 REMARK 465 ASN B 42 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 119 -133.45 -141.17 REMARK 500 SER B 119 -134.78 -145.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HGA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HGA B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP05636 RELATED DB: TARGETTRACK DBREF 5TV7 A 25 200 UNP Q181X4 Q181X4_PEPD6 25 200 DBREF 5TV7 B 25 200 UNP Q181X4 Q181X4_PEPD6 25 200 SEQADV 5TV7 SER A 23 UNP Q181X4 EXPRESSION TAG SEQADV 5TV7 ASN A 24 UNP Q181X4 EXPRESSION TAG SEQADV 5TV7 SER B 23 UNP Q181X4 EXPRESSION TAG SEQADV 5TV7 ASN B 24 UNP Q181X4 EXPRESSION TAG SEQRES 1 A 178 SER ASN ALA ASP THR SER LYS GLU LYS GLY GLY SER LYS SEQRES 2 A 178 GLU THR VAL PRO GLU LYS ASN LEU ASP SER PHE THR LEU SEQRES 3 A 178 SER GLY TYR ILE TYR THR TYR GLU ASN ALA PRO GLN GLU SEQRES 4 A 178 ILE ARG ASP GLU HIS LYS GLN ASN CME GLU GLU ILE ASN SEQRES 5 A 178 ILE ASP PRO LYS PRO ASP ASP GLU ILE PHE VAL PRO GLU SEQRES 6 A 178 SER ALA ASN LEU MSE ASN GLU ASP ASN SER LYS GLY VAL SEQRES 7 A 178 TYR ALA SER TYR THR VAL SER TYR ASN ILE GLY ALA LYS SEQRES 8 A 178 THR ILE THR ILE MSE SER ASN GLU TYR LEU THR ILE SER SEQRES 9 A 178 THR THR LYS VAL ILE ARG LYS GLY ASN SER GLY LYS GLU SEQRES 10 A 178 VAL LYS ALA ALA GLN ILE MSE LEU THR LEU LEU GLY TYR SEQRES 11 A 178 ASN VAL GLY ILE ASP SER SER PHE GLY SER LYS THR TYR SEQRES 12 A 178 ASN ALA VAL VAL SER PHE GLN LYS LYS TYR GLY LEU SER SEQRES 13 A 178 ALA ASP GLY ILE ILE GLY PRO ALA THR TRP ASP LYS LEU SEQRES 14 A 178 GLY ARG LEU THR ASP PRO THR LEU SER SEQRES 1 B 178 SER ASN ALA ASP THR SER LYS GLU LYS GLY GLY SER LYS SEQRES 2 B 178 GLU THR VAL PRO GLU LYS ASN LEU ASP SER PHE THR LEU SEQRES 3 B 178 SER GLY TYR ILE TYR THR TYR GLU ASN ALA PRO GLN GLU SEQRES 4 B 178 ILE ARG ASP GLU HIS LYS GLN ASN CME GLU GLU ILE ASN SEQRES 5 B 178 ILE ASP PRO LYS PRO ASP ASP GLU ILE PHE VAL PRO GLU SEQRES 6 B 178 SER ALA ASN LEU MSE ASN GLU ASP ASN SER LYS GLY VAL SEQRES 7 B 178 TYR ALA SER TYR THR VAL SER TYR ASN ILE GLY ALA LYS SEQRES 8 B 178 THR ILE THR ILE MSE SER ASN GLU TYR LEU THR ILE SER SEQRES 9 B 178 THR THR LYS VAL ILE ARG LYS GLY ASN SER GLY LYS GLU SEQRES 10 B 178 VAL LYS ALA ALA GLN ILE MSE LEU THR LEU LEU GLY TYR SEQRES 11 B 178 ASN VAL GLY ILE ASP SER SER PHE GLY SER LYS THR TYR SEQRES 12 B 178 ASN ALA VAL VAL SER PHE GLN LYS LYS TYR GLY LEU SER SEQRES 13 B 178 ALA ASP GLY ILE ILE GLY PRO ALA THR TRP ASP LYS LEU SEQRES 14 B 178 GLY ARG LEU THR ASP PRO THR LEU SER MODRES 5TV7 CME A 70 CYS MODIFIED RESIDUE MODRES 5TV7 MSE A 92 MET MODIFIED RESIDUE MODRES 5TV7 MSE A 118 MET MODIFIED RESIDUE MODRES 5TV7 MSE A 146 MET MODIFIED RESIDUE MODRES 5TV7 CME B 70 CYS MODIFIED RESIDUE MODRES 5TV7 MSE B 92 MET MODIFIED RESIDUE MODRES 5TV7 MSE B 118 MET MODIFIED RESIDUE MODRES 5TV7 MSE B 146 MET MODIFIED RESIDUE HET CME A 70 10 HET MSE A 92 8 HET MSE A 118 8 HET MSE A 146 8 HET CME B 70 10 HET MSE B 92 8 HET MSE B 118 8 HET MSE B 146 8 HET HGA A 301 11 HET HGA B 301 11 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE HETNAM MSE SELENOMETHIONINE HETNAM HGA GLUTAMINE HYDROXAMATE FORMUL 1 CME 2(C5 H11 N O3 S2) FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 HGA 2(C5 H10 N2 O4) FORMUL 5 HOH *201(H2 O) HELIX 1 AA1 LEU A 43 THR A 47 5 5 HELIX 2 AA2 PRO A 59 ILE A 73 1 15 HELIX 3 AA3 ASP A 95 GLY A 99 5 5 HELIX 4 AA4 GLY A 137 LEU A 150 1 14 HELIX 5 AA5 GLY A 161 TYR A 175 1 15 HELIX 6 AA6 GLY A 184 ASP A 196 1 13 HELIX 7 AA7 LEU B 43 THR B 47 5 5 HELIX 8 AA8 PRO B 59 ILE B 73 1 15 HELIX 9 AA9 GLY B 137 LEU B 150 1 14 HELIX 10 AB1 GLY B 161 TYR B 175 1 15 HELIX 11 AB2 GLY B 184 ASP B 196 1 13 SHEET 1 AA1 5 GLU A 82 PRO A 86 0 SHEET 2 AA1 5 LEU A 48 THR A 54 -1 N TYR A 51 O VAL A 85 SHEET 3 AA1 5 VAL A 100 ASN A 109 -1 O TYR A 104 N LEU A 48 SHEET 4 AA1 5 THR A 114 MSE A 118 -1 O THR A 116 N SER A 107 SHEET 5 AA1 5 TYR A 122 SER A 126 -1 O LEU A 123 N ILE A 117 SHEET 1 AA2 5 GLU B 82 PRO B 86 0 SHEET 2 AA2 5 LEU B 48 THR B 54 -1 N TYR B 51 O VAL B 85 SHEET 3 AA2 5 VAL B 100 ASN B 109 -1 O VAL B 100 N ILE B 52 SHEET 4 AA2 5 THR B 114 MSE B 118 -1 O THR B 116 N SER B 107 SHEET 5 AA2 5 TYR B 122 SER B 126 -1 O LEU B 123 N ILE B 117 LINK C ASN A 69 N CME A 70 1555 1555 1.33 LINK C CME A 70 N GLU A 71 1555 1555 1.33 LINK C LEU A 91 N MSE A 92 1555 1555 1.33 LINK C MSE A 92 N ASN A 93 1555 1555 1.33 LINK C ILE A 117 N MSE A 118 1555 1555 1.33 LINK C MSE A 118 N SER A 119 1555 1555 1.33 LINK C ILE A 145 N MSE A 146 1555 1555 1.32 LINK C MSE A 146 N LEU A 147 1555 1555 1.33 LINK C ASN B 69 N CME B 70 1555 1555 1.34 LINK C CME B 70 N GLU B 71 1555 1555 1.33 LINK C LEU B 91 N MSE B 92 1555 1555 1.33 LINK C MSE B 92 N ASN B 93 1555 1555 1.33 LINK C ILE B 117 N MSE B 118 1555 1555 1.33 LINK C MSE B 118 N SER B 119 1555 1555 1.33 LINK C ILE B 145 N MSE B 146 1555 1555 1.33 LINK C MSE B 146 N LEU B 147 1555 1555 1.33 SITE 1 AC1 10 VAL A 130 SER A 170 ASP A 180 ILE A 182 SITE 2 AC1 10 GLY A 184 PRO A 185 ALA A 186 THR A 187 SITE 3 AC1 10 HOH A 434 HOH A 449 SITE 1 AC2 10 SER B 170 ASP B 180 ILE B 182 GLY B 184 SITE 2 AC2 10 PRO B 185 ALA B 186 THR B 187 HOH B 429 SITE 3 AC2 10 HOH B 456 HOH B 467 CRYST1 134.949 35.008 101.533 90.00 126.25 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007410 0.000000 0.005434 0.00000 SCALE2 0.000000 0.028565 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012213 0.00000