data_5TVI # _entry.id 5TVI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.284 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5TVI WWPDB D_1000219330 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5TVI _pdbx_database_status.recvd_initial_deposition_date 2016-11-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jain, A.' 1 'Salunke, D.M.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proteins _citation.journal_id_ASTM PSFGEY _citation.journal_id_CSD 0867 _citation.journal_id_ISSN 1097-0134 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 85 _citation.language ? _citation.page_first 1820 _citation.page_last 1830 _citation.title 'Crystal structure of nonspecific lipid transfer protein from Solanum melongena' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/prot.25335 _citation.pdbx_database_id_PubMed 28612368 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Jain, A.' 1 primary 'Salunke, D.M.' 2 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 5TVI _cell.details ? _cell.formula_units_Z ? _cell.length_a 87.480 _cell.length_a_esd ? _cell.length_b 87.480 _cell.length_b_esd ? _cell.length_c 49.670 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TVI _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'non specific lipid transfer protein' 9404.618 2 ? ? ? ? 2 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 3 non-polymer syn 'MYRISTIC ACID' 228.371 1 ? ? ? ? 4 non-polymer syn octacosan-1-ol 410.760 1 ? ? ? ? 5 water nat water 18.015 61 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AVTCGQVDANLAPCVPFLTQGGEPGAACCSGVKTLNGNAQSPDDRKTACNCIKAAANRYPNLKDDAAQSLPSKCGISLNV PISRTINCDTIS ; _entity_poly.pdbx_seq_one_letter_code_can ;AVTCGQVDANLAPCVPFLTQGGEPGAACCSGVKTLNGNAQSPDDRKTACNCIKAAANRYPNLKDDAAQSLPSKCGISLNV PISRTINCDTIS ; _entity_poly.pdbx_strand_id V,W _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 VAL n 1 3 THR n 1 4 CYS n 1 5 GLY n 1 6 GLN n 1 7 VAL n 1 8 ASP n 1 9 ALA n 1 10 ASN n 1 11 LEU n 1 12 ALA n 1 13 PRO n 1 14 CYS n 1 15 VAL n 1 16 PRO n 1 17 PHE n 1 18 LEU n 1 19 THR n 1 20 GLN n 1 21 GLY n 1 22 GLY n 1 23 GLU n 1 24 PRO n 1 25 GLY n 1 26 ALA n 1 27 ALA n 1 28 CYS n 1 29 CYS n 1 30 SER n 1 31 GLY n 1 32 VAL n 1 33 LYS n 1 34 THR n 1 35 LEU n 1 36 ASN n 1 37 GLY n 1 38 ASN n 1 39 ALA n 1 40 GLN n 1 41 SER n 1 42 PRO n 1 43 ASP n 1 44 ASP n 1 45 ARG n 1 46 LYS n 1 47 THR n 1 48 ALA n 1 49 CYS n 1 50 ASN n 1 51 CYS n 1 52 ILE n 1 53 LYS n 1 54 ALA n 1 55 ALA n 1 56 ALA n 1 57 ASN n 1 58 ARG n 1 59 TYR n 1 60 PRO n 1 61 ASN n 1 62 LEU n 1 63 LYS n 1 64 ASP n 1 65 ASP n 1 66 ALA n 1 67 ALA n 1 68 GLN n 1 69 SER n 1 70 LEU n 1 71 PRO n 1 72 SER n 1 73 LYS n 1 74 CYS n 1 75 GLY n 1 76 ILE n 1 77 SER n 1 78 LEU n 1 79 ASN n 1 80 VAL n 1 81 PRO n 1 82 ILE n 1 83 SER n 1 84 ARG n 1 85 THR n 1 86 ILE n 1 87 ASN n 1 88 CYS n 1 89 ASP n 1 90 THR n 1 91 ILE n 1 92 SER n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 92 _entity_src_nat.common_name eggplant _entity_src_nat.pdbx_organism_scientific 'Solanum melongena' _entity_src_nat.pdbx_ncbi_taxonomy_id 4111 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5TVI _struct_ref.pdbx_db_accession 5TVI _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5TVI V 1 ? 92 ? 5TVI 1 ? 92 ? 1 92 2 1 5TVI W 1 ? 92 ? 5TVI 1 ? 92 ? 1 92 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MYR non-polymer . 'MYRISTIC ACID' ? 'C14 H28 O2' 228.371 O8N non-polymer . octacosan-1-ol ? 'C28 H58 O' 410.760 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5TVI _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.99 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 58.83 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.05M Zinc acetate dihydrate, 20% w/v polyethylene glycol 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-04-27 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.95372 1.0 2 1.77120 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE BM14' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list '0.95372, 1.77120' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BM14 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5TVI _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.87 _reflns.d_resolution_low 32.826 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 18069 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.4 _reflns.pdbx_Rmerge_I_obs 0.061 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.87 _reflns_shell.d_res_low 1.91 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 5.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs 1171 _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.433 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 9.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.939 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5TVI _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.870 _refine.ls_d_res_low 32.826 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 18041 _refine.ls_number_reflns_R_free 1804 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.87 _refine.ls_percent_reflns_R_free 10.17 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1877 _refine.ls_R_factor_R_free 0.2254 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1836 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.39 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 20.11 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.21 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1282 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 51 _refine_hist.number_atoms_solvent 61 _refine_hist.number_atoms_total 1394 _refine_hist.d_res_high 1.870 _refine_hist.d_res_low 32.826 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 ? 1354 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.380 ? 1815 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 19.072 ? 520 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.088 ? 211 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 242 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.8702 1.8948 . . 163 1222 100.00 . . . 0.3087 . 0.2557 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8948 1.9207 . . 155 1190 100.00 . . . 0.3222 . 0.2365 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9207 1.9482 . . 166 1167 100.00 . . . 0.2577 . 0.2256 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9482 1.9773 . . 144 1208 100.00 . . . 0.2416 . 0.2128 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9773 2.0081 . . 132 1236 100.00 . . . 0.2791 . 0.2132 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0081 2.0411 . . 119 1215 100.00 . . . 0.2573 . 0.1930 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0411 2.0763 . . 130 1235 100.00 . . . 0.2483 . 0.1842 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0763 2.1140 . . 127 1179 100.00 . . . 0.2268 . 0.1939 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1140 2.1547 . . 157 1237 100.00 . . . 0.1996 . 0.1754 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1547 2.1986 . . 150 1164 100.00 . . . 0.2650 . 0.1860 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1986 2.2464 . . 127 1270 100.00 . . . 0.2045 . 0.1670 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2464 2.2987 . . 152 1181 100.00 . . . 0.2422 . 0.1762 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2987 2.3561 . . 123 1228 100.00 . . . 0.2206 . 0.1737 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3561 2.4198 . . 126 1233 100.00 . . . 0.2080 . 0.1635 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4198 2.4910 . . 145 1215 100.00 . . . 0.1942 . 0.1742 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4910 2.5714 . . 146 1201 100.00 . . . 0.2077 . 0.1670 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5714 2.6632 . . 124 1214 100.00 . . . 0.2074 . 0.1627 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6632 2.7698 . . 111 1227 100.00 . . . 0.2553 . 0.1741 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7698 2.8958 . . 145 1226 100.00 . . . 0.2052 . 0.1830 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8958 3.0484 . . 144 1187 100.00 . . . 0.1860 . 0.1577 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0484 3.2392 . . 123 1249 100.00 . . . 0.1888 . 0.1707 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2392 3.4891 . . 127 1216 100.00 . . . 0.1845 . 0.1832 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4891 3.8397 . . 155 1196 100.00 . . . 0.2454 . 0.1715 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.8397 4.3942 . . 103 1245 100.00 . . . 0.2294 . 0.1816 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.3942 5.5319 . . 136 1220 100.00 . . . 0.2361 . 0.1989 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.5319 32.8313 . . 140 1159 97.00 . . . 0.2404 . 0.2073 . . . . . . . . . . # _struct.entry_id 5TVI _struct.title ;Crystal structure of non-specific lipid transfer protein reveals non-canonical lipid binding: possible relevance in modulating allergenicity ; _struct.pdbx_descriptor 'non specific lipid transfer protein' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5TVI _struct_keywords.text 'Solanum melongena, non-specific lipid transfer protein, PLANT PROTEIN' _struct_keywords.pdbx_keywords 'PLANT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 CYS A 4 ? GLN A 20 ? CYS V 4 GLN V 20 1 ? 17 HELX_P HELX_P2 AA2 ALA A 26 ? ASN A 38 ? ALA V 26 ASN V 38 1 ? 13 HELX_P HELX_P3 AA3 PRO A 42 ? ARG A 58 ? PRO V 42 ARG V 58 1 ? 17 HELX_P HELX_P4 AA4 ASP A 64 ? CYS A 74 ? ASP V 64 CYS V 74 1 ? 11 HELX_P HELX_P5 AA5 ASN A 87 ? ILE A 91 ? ASN V 87 ILE V 91 5 ? 5 HELX_P HELX_P6 AA6 CYS B 4 ? GLN B 20 ? CYS W 4 GLN W 20 1 ? 17 HELX_P HELX_P7 AA7 ALA B 26 ? ASN B 38 ? ALA W 26 ASN W 38 1 ? 13 HELX_P HELX_P8 AA8 PRO B 42 ? ARG B 58 ? PRO W 42 ARG W 58 1 ? 17 HELX_P HELX_P9 AA9 ASP B 64 ? CYS B 74 ? ASP W 64 CYS W 74 1 ? 11 HELX_P HELX_P10 AB1 ASN B 87 ? ILE B 91 ? ASN W 87 ILE W 91 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 4 SG ? ? ? 1_555 A CYS 51 SG ? ? V CYS 4 V CYS 51 1_555 ? ? ? ? ? ? ? 2.046 ? disulf2 disulf ? ? A CYS 14 SG ? ? ? 1_555 A CYS 28 SG ? ? V CYS 14 V CYS 28 1_555 ? ? ? ? ? ? ? 2.066 ? disulf3 disulf ? ? A CYS 29 SG ? ? ? 1_555 A CYS 74 SG ? ? V CYS 29 V CYS 74 1_555 ? ? ? ? ? ? ? 2.050 ? disulf4 disulf ? ? A CYS 49 SG ? ? ? 1_555 A CYS 88 SG ? ? V CYS 49 V CYS 88 1_555 ? ? ? ? ? ? ? 2.059 ? disulf5 disulf ? ? B CYS 4 SG ? ? ? 1_555 B CYS 51 SG ? ? W CYS 4 W CYS 51 1_555 ? ? ? ? ? ? ? 2.046 ? disulf6 disulf ? ? B CYS 14 SG ? ? ? 1_555 B CYS 28 SG ? ? W CYS 14 W CYS 28 1_555 ? ? ? ? ? ? ? 2.046 ? disulf7 disulf ? ? B CYS 29 SG ? ? ? 1_555 B CYS 74 SG ? ? W CYS 29 W CYS 74 1_555 ? ? ? ? ? ? ? 2.073 ? disulf8 disulf ? ? B CYS 49 SG ? ? ? 1_555 B CYS 88 SG ? ? W CYS 49 W CYS 88 1_555 ? ? ? ? ? ? ? 2.107 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software V GOL 101 ? 6 'binding site for residue GOL V 101' AC2 Software V MYR 102 ? 3 'binding site for residue MYR V 102' AC3 Software W O8N 101 ? 14 'binding site for residue O8N W 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 8 ? ASP V 8 . ? 1_555 ? 2 AC1 6 LEU A 11 ? LEU V 11 . ? 1_555 ? 3 AC1 6 ALA A 12 ? ALA V 12 . ? 1_555 ? 4 AC1 6 VAL A 15 ? VAL V 15 . ? 1_555 ? 5 AC1 6 ARG A 58 ? ARG V 58 . ? 1_555 ? 6 AC1 6 TYR A 59 ? TYR V 59 . ? 1_555 ? 7 AC2 3 CYS A 29 ? CYS V 29 . ? 1_555 ? 8 AC2 3 LYS A 33 ? LYS V 33 . ? 1_555 ? 9 AC2 3 CYS A 74 ? CYS V 74 . ? 1_555 ? 10 AC3 14 ASN A 50 ? ASN V 50 . ? 5_664 ? 11 AC3 14 LYS A 53 ? LYS V 53 . ? 5_664 ? 12 AC3 14 ALA A 54 ? ALA V 54 . ? 5_664 ? 13 AC3 14 ASN A 57 ? ASN V 57 . ? 5_664 ? 14 AC3 14 THR A 85 ? THR V 85 . ? 5_664 ? 15 AC3 14 ASN A 87 ? ASN V 87 . ? 5_664 ? 16 AC3 14 ASN B 50 ? ASN W 50 . ? 1_555 ? 17 AC3 14 LYS B 53 ? LYS W 53 . ? 1_555 ? 18 AC3 14 ALA B 54 ? ALA W 54 . ? 1_555 ? 19 AC3 14 ASN B 57 ? ASN W 57 . ? 1_555 ? 20 AC3 14 THR B 85 ? THR W 85 . ? 1_555 ? 21 AC3 14 ILE B 86 ? ILE W 86 . ? 1_555 ? 22 AC3 14 ASN B 87 ? ASN W 87 . ? 1_555 ? 23 AC3 14 ASP B 89 ? ASP W 89 . ? 1_555 ? # _atom_sites.entry_id 5TVI _atom_sites.fract_transf_matrix[1][1] 0.011431 _atom_sites.fract_transf_matrix[1][2] 0.006600 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013200 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020133 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 ? ? ? V . n A 1 2 VAL 2 2 2 VAL VAL V . n A 1 3 THR 3 3 3 THR THR V . n A 1 4 CYS 4 4 4 CYS CYS V . n A 1 5 GLY 5 5 5 GLY GLY V . n A 1 6 GLN 6 6 6 GLN GLN V . n A 1 7 VAL 7 7 7 VAL VAL V . n A 1 8 ASP 8 8 8 ASP ASP V . n A 1 9 ALA 9 9 9 ALA ALA V . n A 1 10 ASN 10 10 10 ASN ASN V . n A 1 11 LEU 11 11 11 LEU LEU V . n A 1 12 ALA 12 12 12 ALA ALA V . n A 1 13 PRO 13 13 13 PRO PRO V . n A 1 14 CYS 14 14 14 CYS CYS V . n A 1 15 VAL 15 15 15 VAL VAL V . n A 1 16 PRO 16 16 16 PRO PRO V . n A 1 17 PHE 17 17 17 PHE PHE V . n A 1 18 LEU 18 18 18 LEU LEU V . n A 1 19 THR 19 19 19 THR THR V . n A 1 20 GLN 20 20 20 GLN GLN V . n A 1 21 GLY 21 21 21 GLY GLY V . n A 1 22 GLY 22 22 22 GLY GLY V . n A 1 23 GLU 23 23 23 GLU GLU V . n A 1 24 PRO 24 24 24 PRO PRO V . n A 1 25 GLY 25 25 25 GLY GLY V . n A 1 26 ALA 26 26 26 ALA ALA V . n A 1 27 ALA 27 27 27 ALA ALA V . n A 1 28 CYS 28 28 28 CYS CYS V . n A 1 29 CYS 29 29 29 CYS CYS V . n A 1 30 SER 30 30 30 SER SER V . n A 1 31 GLY 31 31 31 GLY GLY V . n A 1 32 VAL 32 32 32 VAL VAL V . n A 1 33 LYS 33 33 33 LYS LYS V . n A 1 34 THR 34 34 34 THR THR V . n A 1 35 LEU 35 35 35 LEU LEU V . n A 1 36 ASN 36 36 36 ASN ASN V . n A 1 37 GLY 37 37 37 GLY GLY V . n A 1 38 ASN 38 38 38 ASN ASN V . n A 1 39 ALA 39 39 39 ALA ALA V . n A 1 40 GLN 40 40 40 GLN GLN V . n A 1 41 SER 41 41 41 SER SER V . n A 1 42 PRO 42 42 42 PRO PRO V . n A 1 43 ASP 43 43 43 ASP ASP V . n A 1 44 ASP 44 44 44 ASP ASP V . n A 1 45 ARG 45 45 45 ARG ARG V . n A 1 46 LYS 46 46 46 LYS LYS V . n A 1 47 THR 47 47 47 THR THR V . n A 1 48 ALA 48 48 48 ALA ALA V . n A 1 49 CYS 49 49 49 CYS CYS V . n A 1 50 ASN 50 50 50 ASN ASN V . n A 1 51 CYS 51 51 51 CYS CYS V . n A 1 52 ILE 52 52 52 ILE ILE V . n A 1 53 LYS 53 53 53 LYS LYS V . n A 1 54 ALA 54 54 54 ALA ALA V . n A 1 55 ALA 55 55 55 ALA ALA V . n A 1 56 ALA 56 56 56 ALA ALA V . n A 1 57 ASN 57 57 57 ASN ASN V . n A 1 58 ARG 58 58 58 ARG ARG V . n A 1 59 TYR 59 59 59 TYR TYR V . n A 1 60 PRO 60 60 60 PRO PRO V . n A 1 61 ASN 61 61 61 ASN GLY V . n A 1 62 LEU 62 62 62 LEU LEU V . n A 1 63 LYS 63 63 63 LYS LYS V . n A 1 64 ASP 64 64 64 ASP ASP V . n A 1 65 ASP 65 65 65 ASP ASP V . n A 1 66 ALA 66 66 66 ALA ALA V . n A 1 67 ALA 67 67 67 ALA ALA V . n A 1 68 GLN 68 68 68 GLN GLN V . n A 1 69 SER 69 69 69 SER SER V . n A 1 70 LEU 70 70 70 LEU LEU V . n A 1 71 PRO 71 71 71 PRO PRO V . n A 1 72 SER 72 72 72 SER SER V . n A 1 73 LYS 73 73 73 LYS LYS V . n A 1 74 CYS 74 74 74 CYS CYS V . n A 1 75 GLY 75 75 75 GLY GLY V . n A 1 76 ILE 76 76 76 ILE ILE V . n A 1 77 SER 77 77 77 SER SER V . n A 1 78 LEU 78 78 78 LEU LEU V . n A 1 79 ASN 79 79 79 ASN ASN V . n A 1 80 VAL 80 80 80 VAL VAL V . n A 1 81 PRO 81 81 81 PRO PRO V . n A 1 82 ILE 82 82 82 ILE ILE V . n A 1 83 SER 83 83 83 SER SER V . n A 1 84 ARG 84 84 84 ARG ARG V . n A 1 85 THR 85 85 85 THR THR V . n A 1 86 ILE 86 86 86 ILE ILE V . n A 1 87 ASN 87 87 87 ASN ASN V . n A 1 88 CYS 88 88 88 CYS CYS V . n A 1 89 ASP 89 89 89 ASP ASP V . n A 1 90 THR 90 90 90 THR THR V . n A 1 91 ILE 91 91 91 ILE ILE V . n A 1 92 SER 92 92 ? ? ? V . n B 1 1 ALA 1 1 1 ALA ALA W . n B 1 2 VAL 2 2 2 VAL VAL W . n B 1 3 THR 3 3 3 THR THR W . n B 1 4 CYS 4 4 4 CYS CYS W . n B 1 5 GLY 5 5 5 GLY GLY W . n B 1 6 GLN 6 6 6 GLN GLN W . n B 1 7 VAL 7 7 7 VAL VAL W . n B 1 8 ASP 8 8 8 ASP ASP W . n B 1 9 ALA 9 9 9 ALA ALA W . n B 1 10 ASN 10 10 10 ASN ASN W . n B 1 11 LEU 11 11 11 LEU LEU W . n B 1 12 ALA 12 12 12 ALA ALA W . n B 1 13 PRO 13 13 13 PRO PRO W . n B 1 14 CYS 14 14 14 CYS CYS W . n B 1 15 VAL 15 15 15 VAL VAL W . n B 1 16 PRO 16 16 16 PRO PRO W . n B 1 17 PHE 17 17 17 PHE PHE W . n B 1 18 LEU 18 18 18 LEU LEU W . n B 1 19 THR 19 19 19 THR THR W . n B 1 20 GLN 20 20 20 GLN GLN W . n B 1 21 GLY 21 21 21 GLY GLY W . n B 1 22 GLY 22 22 22 GLY GLY W . n B 1 23 GLU 23 23 23 GLU GLU W . n B 1 24 PRO 24 24 24 PRO PRO W . n B 1 25 GLY 25 25 25 GLY GLY W . n B 1 26 ALA 26 26 26 ALA ALA W . n B 1 27 ALA 27 27 27 ALA ALA W . n B 1 28 CYS 28 28 28 CYS CYS W . n B 1 29 CYS 29 29 29 CYS CYS W . n B 1 30 SER 30 30 30 SER SER W . n B 1 31 GLY 31 31 31 GLY GLY W . n B 1 32 VAL 32 32 32 VAL VAL W . n B 1 33 LYS 33 33 33 LYS LYS W . n B 1 34 THR 34 34 34 THR THR W . n B 1 35 LEU 35 35 35 LEU LEU W . n B 1 36 ASN 36 36 36 ASN ASN W . n B 1 37 GLY 37 37 37 GLY GLY W . n B 1 38 ASN 38 38 38 ASN ASN W . n B 1 39 ALA 39 39 39 ALA ALA W . n B 1 40 GLN 40 40 40 GLN GLN W . n B 1 41 SER 41 41 41 SER SER W . n B 1 42 PRO 42 42 42 PRO PRO W . n B 1 43 ASP 43 43 43 ASP ASP W . n B 1 44 ASP 44 44 44 ASP ASP W . n B 1 45 ARG 45 45 45 ARG ARG W . n B 1 46 LYS 46 46 46 LYS LYS W . n B 1 47 THR 47 47 47 THR THR W . n B 1 48 ALA 48 48 48 ALA ALA W . n B 1 49 CYS 49 49 49 CYS CYS W . n B 1 50 ASN 50 50 50 ASN ASN W . n B 1 51 CYS 51 51 51 CYS CYS W . n B 1 52 ILE 52 52 52 ILE ILE W . n B 1 53 LYS 53 53 53 LYS LYS W . n B 1 54 ALA 54 54 54 ALA ALA W . n B 1 55 ALA 55 55 55 ALA ALA W . n B 1 56 ALA 56 56 56 ALA ALA W . n B 1 57 ASN 57 57 57 ASN ASN W . n B 1 58 ARG 58 58 58 ARG ARG W . n B 1 59 TYR 59 59 59 TYR TYR W . n B 1 60 PRO 60 60 60 PRO PRO W . n B 1 61 ASN 61 61 61 ASN ASN W . n B 1 62 LEU 62 62 62 LEU LEU W . n B 1 63 LYS 63 63 63 LYS LYS W . n B 1 64 ASP 64 64 64 ASP ASP W . n B 1 65 ASP 65 65 65 ASP ASP W . n B 1 66 ALA 66 66 66 ALA ALA W . n B 1 67 ALA 67 67 67 ALA ALA W . n B 1 68 GLN 68 68 68 GLN GLN W . n B 1 69 SER 69 69 69 SER SER W . n B 1 70 LEU 70 70 70 LEU LEU W . n B 1 71 PRO 71 71 71 PRO PRO W . n B 1 72 SER 72 72 72 SER SER W . n B 1 73 LYS 73 73 73 LYS LYS W . n B 1 74 CYS 74 74 74 CYS CYS W . n B 1 75 GLY 75 75 75 GLY GLY W . n B 1 76 ILE 76 76 76 ILE ILE W . n B 1 77 SER 77 77 77 SER SER W . n B 1 78 LEU 78 78 78 LEU LEU W . n B 1 79 ASN 79 79 79 ASN ASN W . n B 1 80 VAL 80 80 80 VAL VAL W . n B 1 81 PRO 81 81 81 PRO PRO W . n B 1 82 ILE 82 82 82 ILE ILE W . n B 1 83 SER 83 83 83 SER SER W . n B 1 84 ARG 84 84 84 ARG ARG W . n B 1 85 THR 85 85 85 THR THR W . n B 1 86 ILE 86 86 86 ILE ILE W . n B 1 87 ASN 87 87 87 ASN ASN W . n B 1 88 CYS 88 88 88 CYS CYS W . n B 1 89 ASP 89 89 89 ASP ASP W . n B 1 90 THR 90 90 90 THR THR W . n B 1 91 ILE 91 91 91 ILE ILE W . n B 1 92 SER 92 92 92 SER SER W . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL 1 101 1 GOL GOL V . D 3 MYR 1 102 1 MYR MYR V . E 4 O8N 1 101 1 O8N O8N W . F 5 HOH 1 201 49 HOH HOH V . F 5 HOH 2 202 111 HOH HOH V . F 5 HOH 3 203 113 HOH HOH V . F 5 HOH 4 204 23 HOH HOH V . F 5 HOH 5 205 14 HOH HOH V . F 5 HOH 6 206 4 HOH HOH V . F 5 HOH 7 207 1 HOH HOH V . F 5 HOH 8 208 6 HOH HOH V . F 5 HOH 9 209 2 HOH HOH V . F 5 HOH 10 210 30 HOH HOH V . F 5 HOH 11 211 57 HOH HOH V . F 5 HOH 12 212 29 HOH HOH V . F 5 HOH 13 213 13 HOH HOH V . F 5 HOH 14 214 26 HOH HOH V . F 5 HOH 15 215 72 HOH HOH V . F 5 HOH 16 216 31 HOH HOH V . F 5 HOH 17 217 55 HOH HOH V . F 5 HOH 18 218 16 HOH HOH V . F 5 HOH 19 219 17 HOH HOH V . F 5 HOH 20 220 34 HOH HOH V . F 5 HOH 21 221 102 HOH HOH V . F 5 HOH 22 222 99 HOH HOH V . F 5 HOH 23 223 83 HOH HOH V . F 5 HOH 24 224 65 HOH HOH V . F 5 HOH 25 225 112 HOH HOH V . F 5 HOH 26 226 94 HOH HOH V . F 5 HOH 27 227 74 HOH HOH V . G 5 HOH 1 201 89 HOH HOH W . G 5 HOH 2 202 42 HOH HOH W . G 5 HOH 3 203 24 HOH HOH W . G 5 HOH 4 204 63 HOH HOH W . G 5 HOH 5 205 9 HOH HOH W . G 5 HOH 6 206 20 HOH HOH W . G 5 HOH 7 207 15 HOH HOH W . G 5 HOH 8 208 33 HOH HOH W . G 5 HOH 9 209 5 HOH HOH W . G 5 HOH 10 210 11 HOH HOH W . G 5 HOH 11 211 32 HOH HOH W . G 5 HOH 12 212 12 HOH HOH W . G 5 HOH 13 213 73 HOH HOH W . G 5 HOH 14 214 8 HOH HOH W . G 5 HOH 15 215 22 HOH HOH W . G 5 HOH 16 216 75 HOH HOH W . G 5 HOH 17 217 25 HOH HOH W . G 5 HOH 18 218 7 HOH HOH W . G 5 HOH 19 219 3 HOH HOH W . G 5 HOH 20 220 51 HOH HOH W . G 5 HOH 21 221 84 HOH HOH W . G 5 HOH 22 222 110 HOH HOH W . G 5 HOH 23 223 19 HOH HOH W . G 5 HOH 24 224 88 HOH HOH W . G 5 HOH 25 225 10 HOH HOH W . G 5 HOH 26 226 18 HOH HOH W . G 5 HOH 27 227 109 HOH HOH W . G 5 HOH 28 228 90 HOH HOH W . G 5 HOH 29 229 41 HOH HOH W . G 5 HOH 30 230 85 HOH HOH W . G 5 HOH 31 231 82 HOH HOH W . G 5 HOH 32 232 28 HOH HOH W . G 5 HOH 33 233 114 HOH HOH W . G 5 HOH 34 234 103 HOH HOH W . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,F 2 1 B,E,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 260 ? 1 MORE -1 ? 1 'SSA (A^2)' 4530 ? 2 'ABSA (A^2)' 0 ? 2 MORE 0 ? 2 'SSA (A^2)' 4860 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-07-05 2 'Structure model' 1 1 2017-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.title' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 100.6373 _pdbx_refine_tls.origin_y 32.7485 _pdbx_refine_tls.origin_z -3.2510 _pdbx_refine_tls.T[1][1] 0.1334 _pdbx_refine_tls.T[2][2] 0.1996 _pdbx_refine_tls.T[3][3] 0.1506 _pdbx_refine_tls.T[1][2] 0.0434 _pdbx_refine_tls.T[1][3] 0.0127 _pdbx_refine_tls.T[2][3] -0.0026 _pdbx_refine_tls.L[1][1] 1.1276 _pdbx_refine_tls.L[2][2] 0.1938 _pdbx_refine_tls.L[3][3] 0.0995 _pdbx_refine_tls.L[1][2] -0.3732 _pdbx_refine_tls.L[1][3] -0.2292 _pdbx_refine_tls.L[2][3] 0.1427 _pdbx_refine_tls.S[1][1] 0.1183 _pdbx_refine_tls.S[1][2] -0.0089 _pdbx_refine_tls.S[1][3] 0.1276 _pdbx_refine_tls.S[2][1] 0.0458 _pdbx_refine_tls.S[2][2] 0.0142 _pdbx_refine_tls.S[2][3] -0.0027 _pdbx_refine_tls.S[3][1] 0.0279 _pdbx_refine_tls.S[3][2] -0.0528 _pdbx_refine_tls.S[3][3] 0.0746 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.8.2_1309 1 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? 0.6 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.8.1 3 ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NH1 _pdbx_validate_close_contact.auth_asym_id_1 V _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 45 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 V _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 201 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.08 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 V GLN 40 ? CG ? A GLN 40 CG 2 1 Y 1 V GLN 40 ? CD ? A GLN 40 CD 3 1 Y 1 V GLN 40 ? OE1 ? A GLN 40 OE1 4 1 Y 1 V GLN 40 ? NE2 ? A GLN 40 NE2 5 1 Y 1 V ASN 61 ? CB ? A ASN 61 CB 6 1 Y 1 V ASN 61 ? CG ? A ASN 61 CG 7 1 Y 1 V ASN 61 ? OD1 ? A ASN 61 OD1 8 1 Y 1 V ASN 61 ? ND2 ? A ASN 61 ND2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 V ALA 1 ? A ALA 1 2 1 Y 1 V SER 92 ? A SER 92 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 'MYRISTIC ACID' MYR 4 octacosan-1-ol O8N 5 water HOH #