HEADER HYDROLASE 18-NOV-16 5TY5 TITLE NEUTRON STRUCTURE FROM MICROGRAVITY-GROWN CRYSTALS OF INORGANIC TITLE 2 PYROPHOSPHATASE FROM THERMOCOCCUS THEOREDUCENS COMPND MOL_ID: 1; COMPND 2 MOLECULE: INORGANIC PYROPHOSPHATASE; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 SYNONYM: PYROPHOSPHATE PHOSPHO-HYDROLASE; COMPND 5 EC: 3.6.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCOCCUS THIOREDUCENS; SOURCE 3 ORGANISM_TAXID: 277988; SOURCE 4 GENE: PPA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NEUTRON, HYDROLASE, THERMOPHILE, MICROGRAVITY EXPDTA NEUTRON DIFFRACTION AUTHOR N.INOGUCHI,L.COATES,M.L.MORRIS,A.SINGHAL,D.A.MONACO,J.M.GARCIA-RUIZ, AUTHOR 2 M.L.PUSEY,J.D.NG REVDAT 3 04-OCT-23 5TY5 1 REMARK REVDAT 2 09-JAN-19 5TY5 1 JRNL REMARK REVDAT 1 22-NOV-17 5TY5 0 JRNL AUTH N.INOGUCHI,L.COATES,F.MEILLEUR,M.L.MORRIS,A.SINGHAL, JRNL AUTH 2 J.BARCENA,J.M.GARCIA-RUIZ,M.L.PUSEY,J.D.NG JRNL TITL STRUCTURE-FUNCTION ANALYSIS OF THE NEUTRON CRYSTALLOGRAPHIC JRNL TITL 2 STRUCTURE OF INORGANIC PYROPHOSPHATASE DETERMINED FROM JRNL TITL 3 MICROGRAVITY-GROWN CRYSTALS JRNL REF ACTA CRYSTALLOGR.,SECT.A V. 73 132 2017 JRNL REFN ISSN 0108-7673 JRNL DOI 10.1107/S0108767317098695 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 3.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 74.2 REMARK 3 NUMBER OF REFLECTIONS : 36580 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1829 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 14.7748 - 5.3291 0.85 3133 165 0.2034 0.2462 REMARK 3 2 5.3291 - 4.2633 0.92 3337 176 0.2053 0.2407 REMARK 3 3 4.2633 - 3.7344 0.90 3252 171 0.2022 0.1842 REMARK 3 4 3.7344 - 3.3975 0.87 3133 165 0.2279 0.2238 REMARK 3 5 3.3975 - 3.1565 0.80 2898 152 0.2615 0.2493 REMARK 3 6 3.1565 - 2.9720 0.77 2738 145 0.2612 0.2498 REMARK 3 7 2.9720 - 2.8242 0.72 2601 136 0.2705 0.3103 REMARK 3 8 2.8242 - 2.7021 0.68 2471 130 0.2868 0.2903 REMARK 3 9 2.7021 - 2.5986 0.66 2363 124 0.2969 0.2914 REMARK 3 10 2.5986 - 2.5094 0.63 2237 119 0.2903 0.2903 REMARK 3 11 2.5094 - 2.4313 0.62 2247 118 0.2979 0.3118 REMARK 3 12 2.4313 - 2.3621 0.61 2184 114 0.3052 0.3194 REMARK 3 13 2.3621 - 2.3001 0.60 2157 114 0.3111 0.3048 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 19055 REMARK 3 ANGLE : 0.619 33790 REMARK 3 CHIRALITY : 0.046 1239 REMARK 3 PLANARITY : 0.003 3179 REMARK 3 DIHEDRAL : 16.654 5233 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5TY5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1000224827. REMARK 230 REMARK 230 EXPERIMENTAL DETAILS REMARK 230 EXPERIMENT TYPE : NEUTRON DIFFRACTION REMARK 230 DATE OF DATA COLLECTION : 03-NOV-14 REMARK 230 TEMPERATURE (KELVIN) : 293.0 REMARK 230 PH : 4.70 REMARK 230 NUMBER OF CRYSTALS USED : 1 REMARK 230 REMARK 230 NEUTRON SOURCE : SPALLATION SOURCE REMARK 230 BEAMLINE : MANDI REMARK 230 WAVELENGTH OR RANGE (A) : 2-4 REMARK 230 MONOCHROMATOR : NULL REMARK 230 OPTICS : NULL REMARK 230 REMARK 230 DETECTOR TYPE : AREA DETECTOR REMARK 230 DETECTOR MANUFACTURER : ORNL ANGER CAMERA REMARK 230 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 230 DATA SCALING SOFTWARE : LAUENORM REMARK 230 REMARK 230 NUMBER OF UNIQUE REFLECTIONS : 36592 REMARK 230 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 230 RESOLUTION RANGE LOW (A) : 14.780 REMARK 230 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 230 REMARK 230 OVERALL. REMARK 230 COMPLETENESS FOR RANGE (%) : 74.2 REMARK 230 DATA REDUNDANCY : 2.630 REMARK 230 R MERGE (I) : 0.18100 REMARK 230 R SYM (I) : NULL REMARK 230 FOR THE DATA SET : 7.2000 REMARK 230 REMARK 230 IN THE HIGHEST RESOLUTION SHELL. REMARK 230 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 230 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 230 COMPLETENESS FOR SHELL (%) : 60.6 REMARK 230 DATA REDUNDANCY IN SHELL : 1.88 REMARK 230 R MERGE FOR SHELL (I) : 0.23500 REMARK 230 R SYM FOR SHELL (I) : NULL REMARK 230 FOR SHELL : 3.000 REMARK 230 REMARK 230 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 230 SOFTWARE USED : NULL REMARK 230 STARTING MODEL: 3I98 REMARK 230 REMARK 230 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 0.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACETATE, PEG 8000, CALCIUM REMARK 280 CHLORIDE, SODIUM CHLORIDE, PYROPHOSPHATE, PH 4.7, COUNTER- REMARK 280 DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 52.96500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.51500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 52.96500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 47.51500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 176 REMARK 465 GLU A 177 REMARK 465 GLU A 178 REMARK 465 LYS B 176 REMARK 465 GLU B 177 REMARK 465 GLU B 178 REMARK 465 GLY C 175 REMARK 465 LYS C 176 REMARK 465 GLU C 177 REMARK 465 GLU C 178 REMARK 465 MET D 1 REMARK 465 LYS D 176 REMARK 465 GLU D 177 REMARK 465 GLU D 178 REMARK 465 GLY E 175 REMARK 465 LYS E 176 REMARK 465 GLU E 177 REMARK 465 GLU E 178 REMARK 465 MET F 1 REMARK 465 GLY F 175 REMARK 465 LYS F 176 REMARK 465 GLU F 177 REMARK 465 GLU F 178 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS C 120 D2 DOD C 235 1.28 REMARK 500 DZ1 LYS C 120 D2 DOD C 235 1.28 REMARK 500 D1 DOD E 216 D1 DOD E 235 1.40 REMARK 500 D LYS D 141 O DOD D 201 1.41 REMARK 500 DH TYR A 115 O DOD A 204 1.44 REMARK 500 HH TYR E 52 O DOD E 202 1.49 REMARK 500 DH TYR E 52 O DOD E 202 1.49 REMARK 500 O ILE D 59 HG1 THR D 62 1.50 REMARK 500 O ILE D 59 DG1 THR D 62 1.50 REMARK 500 DD22 ASN A 29 OH TYR A 31 1.51 REMARK 500 O TYR A 81 DG1 THR A 84 1.51 REMARK 500 DG SER F 48 O DOD F 212 1.51 REMARK 500 HE1 TRP B 153 O DOD B 203 1.52 REMARK 500 DE1 TRP B 153 O DOD B 203 1.52 REMARK 500 O TYR E 81 DG1 THR E 84 1.52 REMARK 500 H MET F 94 O LYS F 105 1.53 REMARK 500 D MET F 94 O LYS F 105 1.53 REMARK 500 O ILE F 59 DG1 THR F 62 1.53 REMARK 500 H MET E 73 O VAL E 106 1.53 REMARK 500 O DOD B 248 D1 DOD B 260 1.53 REMARK 500 O ILE B 59 DG1 THR B 62 1.54 REMARK 500 O PRO B 24 HG SER B 27 1.54 REMARK 500 O PRO B 24 DG SER B 27 1.54 REMARK 500 O TYR F 115 D1 DOD F 207 1.55 REMARK 500 OD1 ASP D 34 HZ3 LYS D 36 1.56 REMARK 500 OD2 ASP B 98 HZ1 LYS B 141 1.56 REMARK 500 OD2 ASP B 98 DZ1 LYS B 141 1.56 REMARK 500 O TYR F 81 HG1 THR F 84 1.57 REMARK 500 O TYR F 81 DG1 THR F 84 1.57 REMARK 500 HH TYR A 47 O DOD A 205 1.57 REMARK 500 DH TYR A 47 O DOD A 205 1.57 REMARK 500 O ILE D 23 H TYR D 56 1.57 REMARK 500 O ILE D 23 D TYR D 56 1.57 REMARK 500 H MET C 73 O VAL C 106 1.58 REMARK 500 D MET C 73 O VAL C 106 1.58 REMARK 500 HD22 ASN C 2 O DOD C 215 1.59 REMARK 500 DD22 ASN C 2 O DOD C 215 1.59 REMARK 500 O ILE A 59 DG1 THR A 62 1.59 REMARK 500 O TYR E 170 H PHE E 174 1.59 REMARK 500 O TYR E 170 D PHE E 174 1.59 REMARK 500 O DOD D 234 D2 DOD D 237 1.59 REMARK 500 O ASP C 34 D GLY C 38 1.60 REMARK 500 OD2 ASP E 34 DG1 THR E 37 1.60 REMARK 500 O DOD D 234 O DOD D 237 1.94 REMARK 500 OE1 GLU A 157 O DOD A 201 1.99 REMARK 500 OE2 GLU E 12 O DOD E 201 1.99 REMARK 500 O MET C 76 O DOD C 201 2.02 REMARK 500 O DOD D 223 O DOD D 230 2.03 REMARK 500 O DOD C 204 O DOD C 226 2.11 REMARK 500 OE2 GLU F 132 O DOD F 201 2.13 REMARK 500 REMARK 500 THIS ENTRY HAS 54 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 142 DE2 HIS B 135 2655 1.47 REMARK 500 DE2 HIS F 135 OE1 GLU F 142 2656 1.52 REMARK 500 DE2 HIS D 135 OE1 GLU E 142 2656 1.54 REMARK 500 OE1 GLU D 132 HH22 ARG E 28 2656 1.56 REMARK 500 HZ1 LYS B 95 OE2 GLU E 168 4645 1.57 REMARK 500 DZ1 LYS B 95 OE2 GLU E 168 4645 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 48 C PRO A 49 N 0.176 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 12 71.53 -161.33 REMARK 500 ARG A 44 146.11 -174.40 REMARK 500 ASP A 103 57.87 -116.65 REMARK 500 PHE A 174 -36.83 -137.74 REMARK 500 ASP B 103 49.44 -99.13 REMARK 500 GLU C 12 72.80 -159.80 REMARK 500 ASP C 103 60.51 -117.20 REMARK 500 GLU D 12 56.18 -161.76 REMARK 500 PRO D 49 48.94 -78.80 REMARK 500 ASP D 103 57.38 -107.49 REMARK 500 GLU D 112 33.36 -89.97 REMARK 500 GLU E 12 68.42 -166.76 REMARK 500 LYS E 102 96.03 -65.10 REMARK 500 ASP E 103 61.19 -109.34 REMARK 500 GLU F 12 76.76 -155.25 REMARK 500 ASP F 103 54.71 -112.89 REMARK 500 REMARK 500 REMARK: NULL DBREF 5TY5 A 1 178 UNP H0USY5 H0USY5_9EURY 1 178 DBREF 5TY5 B 1 178 UNP H0USY5 H0USY5_9EURY 1 178 DBREF 5TY5 C 1 178 UNP H0USY5 H0USY5_9EURY 1 178 DBREF 5TY5 D 1 178 UNP H0USY5 H0USY5_9EURY 1 178 DBREF 5TY5 E 1 178 UNP H0USY5 H0USY5_9EURY 1 178 DBREF 5TY5 F 1 178 UNP H0USY5 H0USY5_9EURY 1 178 SEQRES 1 A 178 MET ASN PRO PHE HIS GLU LEU GLU PRO GLY PRO GLU VAL SEQRES 2 A 178 PRO GLU VAL VAL TYR ALA LEU ILE GLU ILE PRO LYS GLY SEQRES 3 A 178 SER ARG ASN LYS TYR GLU LEU ASP LYS LYS THR GLY LEU SEQRES 4 A 178 LEU LYS LEU ASP ARG VAL LEU TYR SER PRO PHE PHE TYR SEQRES 5 A 178 PRO VAL ASP TYR GLY ILE ILE PRO GLN THR TRP TYR ASP SEQRES 6 A 178 ASP GLY ASP PRO PHE ASP ILE MET VAL ILE MET ARG GLU SEQRES 7 A 178 PRO VAL TYR PRO LEU THR ILE ILE GLU ALA ARG PRO ILE SEQRES 8 A 178 GLY ILE MET LYS MET GLU ASP SER GLY ASP LYS ASP TRP SEQRES 9 A 178 LYS VAL LEU ALA VAL PRO VAL GLU ASP PRO TYR PHE ASN SEQRES 10 A 178 ASP TRP LYS ASP ILE SER ASP VAL PRO LYS ALA PHE LEU SEQRES 11 A 178 ASP GLU ILE ALA HIS PHE PHE GLN ARG TYR LYS GLU LEU SEQRES 12 A 178 GLN GLY LYS THR THR LYS ILE GLU GLY TRP GLY ASN ALA SEQRES 13 A 178 GLU GLU ALA LYS ARG GLU ILE LEU ARG ALA ILE GLU MET SEQRES 14 A 178 TYR LYS GLU LYS PHE GLY LYS GLU GLU SEQRES 1 B 178 MET ASN PRO PHE HIS GLU LEU GLU PRO GLY PRO GLU VAL SEQRES 2 B 178 PRO GLU VAL VAL TYR ALA LEU ILE GLU ILE PRO LYS GLY SEQRES 3 B 178 SER ARG ASN LYS TYR GLU LEU ASP LYS LYS THR GLY LEU SEQRES 4 B 178 LEU LYS LEU ASP ARG VAL LEU TYR SER PRO PHE PHE TYR SEQRES 5 B 178 PRO VAL ASP TYR GLY ILE ILE PRO GLN THR TRP TYR ASP SEQRES 6 B 178 ASP GLY ASP PRO PHE ASP ILE MET VAL ILE MET ARG GLU SEQRES 7 B 178 PRO VAL TYR PRO LEU THR ILE ILE GLU ALA ARG PRO ILE SEQRES 8 B 178 GLY ILE MET LYS MET GLU ASP SER GLY ASP LYS ASP TRP SEQRES 9 B 178 LYS VAL LEU ALA VAL PRO VAL GLU ASP PRO TYR PHE ASN SEQRES 10 B 178 ASP TRP LYS ASP ILE SER ASP VAL PRO LYS ALA PHE LEU SEQRES 11 B 178 ASP GLU ILE ALA HIS PHE PHE GLN ARG TYR LYS GLU LEU SEQRES 12 B 178 GLN GLY LYS THR THR LYS ILE GLU GLY TRP GLY ASN ALA SEQRES 13 B 178 GLU GLU ALA LYS ARG GLU ILE LEU ARG ALA ILE GLU MET SEQRES 14 B 178 TYR LYS GLU LYS PHE GLY LYS GLU GLU SEQRES 1 C 178 MET ASN PRO PHE HIS GLU LEU GLU PRO GLY PRO GLU VAL SEQRES 2 C 178 PRO GLU VAL VAL TYR ALA LEU ILE GLU ILE PRO LYS GLY SEQRES 3 C 178 SER ARG ASN LYS TYR GLU LEU ASP LYS LYS THR GLY LEU SEQRES 4 C 178 LEU LYS LEU ASP ARG VAL LEU TYR SER PRO PHE PHE TYR SEQRES 5 C 178 PRO VAL ASP TYR GLY ILE ILE PRO GLN THR TRP TYR ASP SEQRES 6 C 178 ASP GLY ASP PRO PHE ASP ILE MET VAL ILE MET ARG GLU SEQRES 7 C 178 PRO VAL TYR PRO LEU THR ILE ILE GLU ALA ARG PRO ILE SEQRES 8 C 178 GLY ILE MET LYS MET GLU ASP SER GLY ASP LYS ASP TRP SEQRES 9 C 178 LYS VAL LEU ALA VAL PRO VAL GLU ASP PRO TYR PHE ASN SEQRES 10 C 178 ASP TRP LYS ASP ILE SER ASP VAL PRO LYS ALA PHE LEU SEQRES 11 C 178 ASP GLU ILE ALA HIS PHE PHE GLN ARG TYR LYS GLU LEU SEQRES 12 C 178 GLN GLY LYS THR THR LYS ILE GLU GLY TRP GLY ASN ALA SEQRES 13 C 178 GLU GLU ALA LYS ARG GLU ILE LEU ARG ALA ILE GLU MET SEQRES 14 C 178 TYR LYS GLU LYS PHE GLY LYS GLU GLU SEQRES 1 D 178 MET ASN PRO PHE HIS GLU LEU GLU PRO GLY PRO GLU VAL SEQRES 2 D 178 PRO GLU VAL VAL TYR ALA LEU ILE GLU ILE PRO LYS GLY SEQRES 3 D 178 SER ARG ASN LYS TYR GLU LEU ASP LYS LYS THR GLY LEU SEQRES 4 D 178 LEU LYS LEU ASP ARG VAL LEU TYR SER PRO PHE PHE TYR SEQRES 5 D 178 PRO VAL ASP TYR GLY ILE ILE PRO GLN THR TRP TYR ASP SEQRES 6 D 178 ASP GLY ASP PRO PHE ASP ILE MET VAL ILE MET ARG GLU SEQRES 7 D 178 PRO VAL TYR PRO LEU THR ILE ILE GLU ALA ARG PRO ILE SEQRES 8 D 178 GLY ILE MET LYS MET GLU ASP SER GLY ASP LYS ASP TRP SEQRES 9 D 178 LYS VAL LEU ALA VAL PRO VAL GLU ASP PRO TYR PHE ASN SEQRES 10 D 178 ASP TRP LYS ASP ILE SER ASP VAL PRO LYS ALA PHE LEU SEQRES 11 D 178 ASP GLU ILE ALA HIS PHE PHE GLN ARG TYR LYS GLU LEU SEQRES 12 D 178 GLN GLY LYS THR THR LYS ILE GLU GLY TRP GLY ASN ALA SEQRES 13 D 178 GLU GLU ALA LYS ARG GLU ILE LEU ARG ALA ILE GLU MET SEQRES 14 D 178 TYR LYS GLU LYS PHE GLY LYS GLU GLU SEQRES 1 E 178 MET ASN PRO PHE HIS GLU LEU GLU PRO GLY PRO GLU VAL SEQRES 2 E 178 PRO GLU VAL VAL TYR ALA LEU ILE GLU ILE PRO LYS GLY SEQRES 3 E 178 SER ARG ASN LYS TYR GLU LEU ASP LYS LYS THR GLY LEU SEQRES 4 E 178 LEU LYS LEU ASP ARG VAL LEU TYR SER PRO PHE PHE TYR SEQRES 5 E 178 PRO VAL ASP TYR GLY ILE ILE PRO GLN THR TRP TYR ASP SEQRES 6 E 178 ASP GLY ASP PRO PHE ASP ILE MET VAL ILE MET ARG GLU SEQRES 7 E 178 PRO VAL TYR PRO LEU THR ILE ILE GLU ALA ARG PRO ILE SEQRES 8 E 178 GLY ILE MET LYS MET GLU ASP SER GLY ASP LYS ASP TRP SEQRES 9 E 178 LYS VAL LEU ALA VAL PRO VAL GLU ASP PRO TYR PHE ASN SEQRES 10 E 178 ASP TRP LYS ASP ILE SER ASP VAL PRO LYS ALA PHE LEU SEQRES 11 E 178 ASP GLU ILE ALA HIS PHE PHE GLN ARG TYR LYS GLU LEU SEQRES 12 E 178 GLN GLY LYS THR THR LYS ILE GLU GLY TRP GLY ASN ALA SEQRES 13 E 178 GLU GLU ALA LYS ARG GLU ILE LEU ARG ALA ILE GLU MET SEQRES 14 E 178 TYR LYS GLU LYS PHE GLY LYS GLU GLU SEQRES 1 F 178 MET ASN PRO PHE HIS GLU LEU GLU PRO GLY PRO GLU VAL SEQRES 2 F 178 PRO GLU VAL VAL TYR ALA LEU ILE GLU ILE PRO LYS GLY SEQRES 3 F 178 SER ARG ASN LYS TYR GLU LEU ASP LYS LYS THR GLY LEU SEQRES 4 F 178 LEU LYS LEU ASP ARG VAL LEU TYR SER PRO PHE PHE TYR SEQRES 5 F 178 PRO VAL ASP TYR GLY ILE ILE PRO GLN THR TRP TYR ASP SEQRES 6 F 178 ASP GLY ASP PRO PHE ASP ILE MET VAL ILE MET ARG GLU SEQRES 7 F 178 PRO VAL TYR PRO LEU THR ILE ILE GLU ALA ARG PRO ILE SEQRES 8 F 178 GLY ILE MET LYS MET GLU ASP SER GLY ASP LYS ASP TRP SEQRES 9 F 178 LYS VAL LEU ALA VAL PRO VAL GLU ASP PRO TYR PHE ASN SEQRES 10 F 178 ASP TRP LYS ASP ILE SER ASP VAL PRO LYS ALA PHE LEU SEQRES 11 F 178 ASP GLU ILE ALA HIS PHE PHE GLN ARG TYR LYS GLU LEU SEQRES 12 F 178 GLN GLY LYS THR THR LYS ILE GLU GLY TRP GLY ASN ALA SEQRES 13 F 178 GLU GLU ALA LYS ARG GLU ILE LEU ARG ALA ILE GLU MET SEQRES 14 F 178 TYR LYS GLU LYS PHE GLY LYS GLU GLU FORMUL 7 DOD *385(D2 O) HELIX 1 AA1 ASN A 2 LEU A 7 1 6 HELIX 2 AA2 ASP A 113 ASN A 117 5 5 HELIX 3 AA3 ASP A 121 VAL A 125 5 5 HELIX 4 AA4 PRO A 126 TYR A 140 1 15 HELIX 5 AA5 ASN A 155 PHE A 174 1 20 HELIX 6 AA6 ASN B 2 LEU B 7 1 6 HELIX 7 AA7 ASP B 113 ASN B 117 5 5 HELIX 8 AA8 ASP B 121 VAL B 125 5 5 HELIX 9 AA9 PRO B 126 TYR B 140 1 15 HELIX 10 AB1 ASN B 155 GLY B 175 1 21 HELIX 11 AB2 ASN C 2 LEU C 7 1 6 HELIX 12 AB3 ASP C 113 ASN C 117 5 5 HELIX 13 AB4 ASP C 121 VAL C 125 5 5 HELIX 14 AB5 PRO C 126 TYR C 140 1 15 HELIX 15 AB6 LYS C 141 GLY C 145 5 5 HELIX 16 AB7 ASN C 155 PHE C 174 1 20 HELIX 17 AB8 PRO D 3 LEU D 7 1 5 HELIX 18 AB9 ASP D 113 ASN D 117 5 5 HELIX 19 AC1 ASP D 121 VAL D 125 5 5 HELIX 20 AC2 PRO D 126 TYR D 140 1 15 HELIX 21 AC3 ALA D 156 GLY D 175 1 20 HELIX 22 AC4 ASN E 2 LEU E 7 1 6 HELIX 23 AC5 ASP E 113 ASN E 117 5 5 HELIX 24 AC6 ASP E 121 VAL E 125 5 5 HELIX 25 AC7 PRO E 126 TYR E 140 1 15 HELIX 26 AC8 LYS E 141 GLY E 145 5 5 HELIX 27 AC9 ASN E 155 PHE E 174 1 20 HELIX 28 AD1 PRO F 3 LEU F 7 1 5 HELIX 29 AD2 ASP F 113 ASN F 117 5 5 HELIX 30 AD3 ASP F 121 VAL F 125 5 5 HELIX 31 AD4 PRO F 126 TYR F 140 1 15 HELIX 32 AD5 ALA F 156 PHE F 174 1 19 SHEET 1 AA1 8 ASP A 101 LYS A 102 0 SHEET 2 AA1 8 THR A 148 GLY A 154 0 SHEET 3 AA1 8 VAL A 17 ILE A 23 0 SHEET 4 AA1 8 ASP A 55 ILE A 58 -1 O TYR A 56 N GLU A 22 SHEET 5 AA1 8 ASP A 71 VAL A 74 -1 O VAL A 74 N ASP A 55 SHEET 6 AA1 8 LYS A 105 PRO A 110 1 O VAL A 106 N MET A 73 SHEET 7 AA1 8 ILE A 85 ASP A 98 -1 N MET A 94 O LYS A 105 SHEET 8 AA1 8 THR A 148 GLY A 154 -1 O LYS A 149 N GLU A 97 SHEET 1 AA2 2 ASN A 29 LEU A 33 0 SHEET 2 AA2 2 LEU A 40 VAL A 45 -1 O LYS A 41 N GLU A 32 SHEET 1 AA3 8 ASP B 101 LYS B 102 0 SHEET 2 AA3 8 THR B 148 GLY B 154 0 SHEET 3 AA3 8 VAL B 17 ILE B 23 0 SHEET 4 AA3 8 ASP B 55 ILE B 58 -1 O ILE B 58 N LEU B 20 SHEET 5 AA3 8 ASP B 71 VAL B 74 -1 O VAL B 74 N ASP B 55 SHEET 6 AA3 8 LYS B 105 PRO B 110 1 O ALA B 108 N MET B 73 SHEET 7 AA3 8 THR B 84 ASP B 98 -1 N ARG B 89 O VAL B 109 SHEET 8 AA3 8 THR B 148 GLY B 154 -1 O GLY B 152 N LYS B 95 SHEET 1 AA4 2 ASN B 29 LEU B 33 0 SHEET 2 AA4 2 LEU B 40 VAL B 45 -1 O ASP B 43 N LYS B 30 SHEET 1 AA5 8 ASP C 101 LYS C 102 0 SHEET 2 AA5 8 THR C 148 GLY C 154 0 SHEET 3 AA5 8 VAL C 17 ILE C 23 0 SHEET 4 AA5 8 ASP C 55 ILE C 58 -1 O TYR C 56 N ILE C 23 SHEET 5 AA5 8 ASP C 71 VAL C 74 -1 O VAL C 74 N ASP C 55 SHEET 6 AA5 8 LYS C 105 PRO C 110 1 O VAL C 106 N MET C 73 SHEET 7 AA5 8 ILE C 85 ASP C 98 -1 N GLY C 92 O LEU C 107 SHEET 8 AA5 8 THR C 148 GLY C 154 -1 O GLY C 152 N LYS C 95 SHEET 1 AA6 2 ASN C 29 LEU C 33 0 SHEET 2 AA6 2 LEU C 40 VAL C 45 -1 O ARG C 44 N LYS C 30 SHEET 1 AA7 8 ASP D 101 LYS D 102 0 SHEET 2 AA7 8 THR D 148 ASN D 155 0 SHEET 3 AA7 8 VAL D 17 ILE D 23 0 SHEET 4 AA7 8 ASP D 55 ILE D 58 -1 O TYR D 56 N ILE D 23 SHEET 5 AA7 8 ASP D 71 VAL D 74 -1 O VAL D 74 N ASP D 55 SHEET 6 AA7 8 LYS D 105 PRO D 110 1 O ALA D 108 N MET D 73 SHEET 7 AA7 8 ILE D 85 ASP D 98 -1 N MET D 94 O LYS D 105 SHEET 8 AA7 8 THR D 148 ASN D 155 -1 O GLY D 154 N ILE D 93 SHEET 1 AA8 9 ASN D 29 LEU D 33 0 SHEET 2 AA8 9 LEU D 40 VAL D 45 -1 O ARG D 44 N LYS D 30 SHEET 3 AA8 9 THR F 84 ASP F 98 1 O ILE F 85 N LEU D 42 SHEET 4 AA8 9 ASP F 101 LYS F 102 -1 O ASP F 101 N ASP F 98 SHEET 5 AA8 9 THR F 84 ASP F 98 -1 N ASP F 98 O ASP F 101 SHEET 6 AA8 9 VAL F 17 ILE F 23 -1 N VAL F 17 O ALA F 88 SHEET 7 AA8 9 ASP F 55 ILE F 58 -1 O TYR F 56 N ILE F 23 SHEET 8 AA8 9 ASP F 71 VAL F 74 -1 O VAL F 74 N ASP F 55 SHEET 9 AA8 9 LYS F 105 PRO F 110 1 O ALA F 108 N MET F 73 SHEET 1 AA9 3 ASP F 101 LYS F 102 0 SHEET 2 AA9 3 THR F 84 ASP F 98 -1 N ASP F 98 O ASP F 101 SHEET 3 AA9 3 THR F 148 ASN F 155 -1 O GLY F 154 N ILE F 93 SHEET 1 AB1 8 ASP E 101 LYS E 102 0 SHEET 2 AB1 8 THR E 148 GLY E 154 0 SHEET 3 AB1 8 VAL E 17 ILE E 23 0 SHEET 4 AB1 8 ASP E 55 ILE E 58 -1 O TYR E 56 N ILE E 23 SHEET 5 AB1 8 ASP E 71 VAL E 74 -1 O VAL E 74 N ASP E 55 SHEET 6 AB1 8 LYS E 105 PRO E 110 1 O VAL E 106 N MET E 73 SHEET 7 AB1 8 ILE E 85 ASP E 98 -1 N MET E 94 O LYS E 105 SHEET 8 AB1 8 THR E 148 GLY E 154 -1 O GLY E 154 N ILE E 93 SHEET 1 AB2 2 ASN E 29 LEU E 33 0 SHEET 2 AB2 2 LEU E 40 VAL E 45 -1 O ARG E 44 N LYS E 30 SHEET 1 AB3 2 ASN F 29 LEU F 33 0 SHEET 2 AB3 2 LEU F 40 VAL F 45 -1 O LYS F 41 N GLU F 32 CISPEP 1 VAL A 13 PRO A 14 0 -3.11 CISPEP 2 VAL B 13 PRO B 14 0 -4.28 CISPEP 3 VAL C 13 PRO C 14 0 -4.98 CISPEP 4 VAL D 13 PRO D 14 0 -2.95 CISPEP 5 VAL E 13 PRO E 14 0 -5.19 CISPEP 6 VAL F 13 PRO F 14 0 -2.53 CRYST1 105.930 95.030 113.500 90.00 98.13 90.00 C 1 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009440 0.000000 0.001349 0.00000 SCALE2 0.000000 0.010523 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008900 0.00000