HEADER DNA BINDING PROTEIN 21-NOV-16 5TZG TITLE STRUCTURE OF THE BLDD CTD(D116A)-(C-DI-GMP)2, FORM 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-BINDING PROTEIN; COMPND 3 CHAIN: C, A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES VENEZUELAE; SOURCE 3 ORGANISM_TAXID: 953739; SOURCE 4 STRAIN: ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 SOURCE 5 / PD 04745; SOURCE 6 GENE: SVEN_1089; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BLDD, C-DI-GMP, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.A.SCHUMACHER REVDAT 4 04-OCT-23 5TZG 1 HETSYN LINK REVDAT 3 13-SEP-17 5TZG 1 JRNL REVDAT 2 10-MAY-17 5TZG 1 JRNL REMARK REVDAT 1 19-APR-17 5TZG 0 JRNL AUTH M.A.SCHUMACHER,W.ZENG,K.C.FINDLAY,M.J.BUTTNER,R.G.BRENNAN, JRNL AUTH 2 N.TSCHOWRI JRNL TITL THE STREPTOMYCES MASTER REGULATOR BLDD BINDS C-DI-GMP JRNL TITL 2 SEQUENTIALLY TO CREATE A FUNCTIONAL BLDD2-(C-DI-GMP)4 JRNL TITL 3 COMPLEX. JRNL REF NUCLEIC ACIDS RES. V. 45 6923 2017 JRNL REFN ESSN 1362-4962 JRNL PMID 28449057 JRNL DOI 10.1093/NAR/GKX287 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.150 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 13016 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1313 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.4264 - 5.1972 0.90 1209 142 0.1899 0.2216 REMARK 3 2 5.1972 - 4.1264 1.00 1335 147 0.1688 0.2033 REMARK 3 3 4.1264 - 3.6051 1.00 1319 152 0.1550 0.2003 REMARK 3 4 3.6051 - 3.2756 1.00 1346 143 0.1979 0.2568 REMARK 3 5 3.2756 - 3.0409 1.00 1350 155 0.2224 0.2835 REMARK 3 6 3.0409 - 2.8617 1.00 1338 153 0.2585 0.3435 REMARK 3 7 2.8617 - 2.7184 1.00 1305 147 0.2646 0.3784 REMARK 3 8 2.7184 - 2.6001 0.97 1302 142 0.2628 0.3853 REMARK 3 9 2.6001 - 2.5000 0.88 1199 132 0.2322 0.2896 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.800 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1302 REMARK 3 ANGLE : 1.383 1791 REMARK 3 CHIRALITY : 0.053 207 REMARK 3 PLANARITY : 0.005 215 REMARK 3 DIHEDRAL : 30.226 482 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 21.2686 20.1409 2.8167 REMARK 3 T TENSOR REMARK 3 T11: 0.2591 T22: 0.3257 REMARK 3 T33: 0.2315 T12: 0.0120 REMARK 3 T13: -0.0011 T23: -0.0457 REMARK 3 L TENSOR REMARK 3 L11: 2.3614 L22: 5.2224 REMARK 3 L33: 1.3629 L12: -0.9235 REMARK 3 L13: -0.3800 L23: -0.6849 REMARK 3 S TENSOR REMARK 3 S11: 0.0903 S12: -0.0033 S13: 0.1832 REMARK 3 S21: -0.0606 S22: -0.1779 S23: 0.1290 REMARK 3 S31: 0.0353 S32: -0.1215 S33: 0.0825 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5TZG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1000225073. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13016 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 59.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05100 REMARK 200 FOR THE DATA SET : 21.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.15800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5TZD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3000, 0.1 M SODIUM ACETATE PH REMARK 280 4.6, 0.1 M ZINC CHLORIDE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+3/4 REMARK 290 8555 -Y,-X,-Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.55900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 14.77950 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 44.33850 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 29.55900 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 44.33850 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 14.77950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 202 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY C 76 REMARK 465 SER C 77 REMARK 465 HIS C 78 REMARK 465 MET C 79 REMARK 465 GLU C 80 REMARK 465 PRO C 81 REMARK 465 PRO C 82 REMARK 465 ARG C 159 REMARK 465 ALA C 160 REMARK 465 VAL C 161 REMARK 465 ALA C 162 REMARK 465 HIS C 163 REMARK 465 GLU C 164 REMARK 465 GLU C 165 REMARK 465 ASN C 166 REMARK 465 GLY A 76 REMARK 465 SER A 77 REMARK 465 HIS A 78 REMARK 465 MET A 79 REMARK 465 GLU A 80 REMARK 465 PRO A 81 REMARK 465 PRO A 82 REMARK 465 PRO A 83 REMARK 465 ARG A 159 REMARK 465 ALA A 160 REMARK 465 VAL A 161 REMARK 465 ALA A 162 REMARK 465 HIS A 163 REMARK 465 GLU A 164 REMARK 465 GLU A 165 REMARK 465 ASN A 166 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP C 154 CG OD1 OD2 REMARK 470 ASP C 156 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP C 127 NH2 ARG C 130 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 116 78.27 -119.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 94 NE2 REMARK 620 2 GLU A 98 OE1 80.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 98 OE2 REMARK 620 2 HIS A 94 NE2 65.1 REMARK 620 3 HOH A 202 O 104.5 143.7 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C2E C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C2E C 204 DBREF 5TZG C 80 166 UNP F2RCL8 F2RCL8_STRVP 80 166 DBREF 5TZG A 80 166 UNP F2RCL8 F2RCL8_STRVP 80 166 SEQADV 5TZG GLY C 76 UNP F2RCL8 EXPRESSION TAG SEQADV 5TZG SER C 77 UNP F2RCL8 EXPRESSION TAG SEQADV 5TZG HIS C 78 UNP F2RCL8 EXPRESSION TAG SEQADV 5TZG MET C 79 UNP F2RCL8 EXPRESSION TAG SEQADV 5TZG ALA C 116 UNP F2RCL8 ASP 116 ENGINEERED MUTATION SEQADV 5TZG GLY A 76 UNP F2RCL8 EXPRESSION TAG SEQADV 5TZG SER A 77 UNP F2RCL8 EXPRESSION TAG SEQADV 5TZG HIS A 78 UNP F2RCL8 EXPRESSION TAG SEQADV 5TZG MET A 79 UNP F2RCL8 EXPRESSION TAG SEQADV 5TZG ALA A 116 UNP F2RCL8 ASP 116 ENGINEERED MUTATION SEQRES 1 C 91 GLY SER HIS MET GLU PRO PRO PRO LYS LEU VAL LEU ASP SEQRES 2 C 91 LEU GLU ARG LEU ALA HIS VAL PRO GLN GLU LYS ALA GLY SEQRES 3 C 91 PRO LEU GLN ARG TYR ALA ALA THR ILE GLN SER GLN ARG SEQRES 4 C 91 GLY ALA TYR ASN GLY LYS VAL LEU SER ILE ARG GLN ASP SEQRES 5 C 91 ASP LEU ARG THR LEU ALA VAL ILE TYR ASP GLN SER PRO SEQRES 6 C 91 SER VAL LEU THR GLU GLN LEU ILE SER TRP GLY VAL LEU SEQRES 7 C 91 ASP ALA ASP ALA ARG ARG ALA VAL ALA HIS GLU GLU ASN SEQRES 1 A 91 GLY SER HIS MET GLU PRO PRO PRO LYS LEU VAL LEU ASP SEQRES 2 A 91 LEU GLU ARG LEU ALA HIS VAL PRO GLN GLU LYS ALA GLY SEQRES 3 A 91 PRO LEU GLN ARG TYR ALA ALA THR ILE GLN SER GLN ARG SEQRES 4 A 91 GLY ALA TYR ASN GLY LYS VAL LEU SER ILE ARG GLN ASP SEQRES 5 A 91 ASP LEU ARG THR LEU ALA VAL ILE TYR ASP GLN SER PRO SEQRES 6 A 91 SER VAL LEU THR GLU GLN LEU ILE SER TRP GLY VAL LEU SEQRES 7 A 91 ASP ALA ASP ALA ARG ARG ALA VAL ALA HIS GLU GLU ASN HET ZN C 201 1 HET ZN C 202 1 HET C2E C 203 46 HET C2E C 204 46 HETNAM ZN ZINC ION HETNAM C2E 9,9'-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10, HETNAM 2 C2E 12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3, HETNAM 3 C2E 2-D:3',2'-J][1,3,7,9,2, HETNAM 4 C2E 8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO- HETNAM 5 C2E 1,9-DIHYDRO-6H-PURIN-6-ONE) HETSYN C2E C-DI-GMP; CYCLIC DIGUANOSINE MONOPHOSPHATE FORMUL 3 ZN 2(ZN 2+) FORMUL 5 C2E 2(C20 H24 N10 O14 P2) FORMUL 7 HOH *29(H2 O) HELIX 1 AA1 LEU C 89 ALA C 93 1 5 HELIX 2 AA2 PRO C 96 GLY C 115 1 20 HELIX 3 AA3 ARG C 125 TYR C 136 1 12 HELIX 4 AA4 SER C 139 TRP C 150 1 12 HELIX 5 AA5 ASP C 154 ARG C 158 5 5 HELIX 6 AA6 LEU A 89 HIS A 94 1 6 HELIX 7 AA7 PRO A 96 GLY A 115 1 20 HELIX 8 AA8 ARG A 125 ASP A 137 1 13 HELIX 9 AA9 SER A 139 TRP A 150 1 12 HELIX 10 AB1 ASP A 154 ARG A 158 5 5 SHEET 1 AA1 2 LEU C 85 ASP C 88 0 SHEET 2 AA1 2 VAL C 121 ILE C 124 -1 O LEU C 122 N LEU C 87 SHEET 1 AA2 2 LEU A 85 ASP A 88 0 SHEET 2 AA2 2 VAL A 121 ILE A 124 -1 O LEU A 122 N LEU A 87 LINK NE2 HIS C 94 ZN ZN C 202 1555 1555 2.31 LINK OE2 GLU C 98 ZN ZN C 201 1555 5555 2.44 LINK ZN ZN C 201 NE2 HIS A 94 3655 1555 2.20 LINK ZN ZN C 201 O HOH A 202 1555 8565 2.65 LINK ZN ZN C 202 OE1 GLU A 98 8655 1555 2.29 SITE 1 AC1 3 HIS A 94 HOH A 202 GLU C 98 SITE 1 AC2 2 GLU A 98 HIS C 94 SITE 1 AC3 12 ARG A 114 SER A 123 ILE A 124 ARG A 125 SITE 2 AC3 12 GLN A 126 ILE C 110 GLN C 113 ARG C 114 SITE 3 AC3 12 ARG C 125 ASP C 128 C2E C 204 HOH C 311 SITE 1 AC4 12 GLN A 113 ARG A 114 ARG A 125 ASP A 128 SITE 2 AC4 12 LYS C 84 ARG C 114 SER C 123 ILE C 124 SITE 3 AC4 12 ARG C 125 GLN C 126 C2E C 203 HOH C 314 CRYST1 82.098 82.098 59.118 90.00 90.00 90.00 P 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012181 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012181 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016915 0.00000