HEADER FATTY ACID BINDING PROTEIN/HYDROLASE 22-NOV-16 5TZY TITLE GPR40 IN COMPLEX WITH AGOPAM AP8 AND PARTIAL AGONIST MK-8666 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FREE FATTY ACID RECEPTOR 1,ENDOLYSIN,FREE FATTY ACID COMPND 3 RECEPTOR 1; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: G-PROTEIN COUPLED RECEPTOR 40,LYSIS PROTEIN,LYSOZYME, COMPND 6 MURAMIDASE; COMPND 7 EC: 3.2.1.17; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, ENTEROBACTERIA PHAGE T4; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606, 10665; SOURCE 5 GENE: FFAR1, GPR40; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: SF21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS FFAR1, PARTIAL AGONIST, FATTY ACID BINDING PROTEIN-HYDROLASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.LU,N.BYRNE,S.PATEL,S.SHARMA,S.M.SOISSON REVDAT 4 04-OCT-23 5TZY 1 REMARK REVDAT 3 19-JUL-17 5TZY 1 JRNL REVDAT 2 21-JUN-17 5TZY 1 JRNL REVDAT 1 07-JUN-17 5TZY 0 JRNL AUTH J.LU,N.BYRNE,J.WANG,G.BRICOGNE,F.K.BROWN,H.R.CHOBANIAN, JRNL AUTH 2 S.L.COLLETTI,J.DI SALVO,B.THOMAS-FOWLKES,Y.GUO,D.L.HALL, JRNL AUTH 3 J.HADIX,N.B.HASTINGS,J.D.HERMES,T.HO,A.D.HOWARD,H.JOSIEN, JRNL AUTH 4 M.KORNIENKO,K.J.LUMB,M.W.MILLER,S.B.PATEL,B.PIO,C.W.PLUMMER, JRNL AUTH 5 B.S.SHERBORNE,P.SHETH,S.SOUZA,S.TUMMALA,C.VONRHEIN,M.WEBB, JRNL AUTH 6 S.J.ALLEN,J.M.JOHNSTON,A.B.WEINGLASS,S.SHARMA,S.M.SOISSON JRNL TITL STRUCTURAL BASIS FOR THE COOPERATIVE ALLOSTERIC ACTIVATION JRNL TITL 2 OF THE FREE FATTY ACID RECEPTOR GPR40. JRNL REF NAT. STRUCT. MOL. BIOL. V. 24 570 2017 JRNL REFN ESSN 1545-9985 JRNL PMID 28581512 JRNL DOI 10.1038/NSMB.3417 REMARK 2 REMARK 2 RESOLUTION. 3.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.6 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 90.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 3 NUMBER OF REFLECTIONS : 9497 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.270 REMARK 3 R VALUE (WORKING SET) : 0.269 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 485 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 5 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 3.22 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.60 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.60 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2525 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2740 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2389 REMARK 3 BIN R VALUE (WORKING SET) : 0.2740 REMARK 3 BIN FREE R VALUE : 0.2580 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.39 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 136 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2923 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 94 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 148.6 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 154.9 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -30.71790 REMARK 3 B22 (A**2) : 9.36640 REMARK 3 B33 (A**2) : 21.35150 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -26.52070 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.680 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.511 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.862 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.794 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3095 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4255 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 915 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 33 ; 8.000 ; HARMONIC REMARK 3 GENERAL PLANES : 517 ; 8.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3095 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 410 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3495 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 1.19 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 1.66 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.94 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|2 - A|211 A|2214 - A|2278 } REMARK 3 ORIGIN FOR THE GROUP (A): -22.2617 0.0364 46.1229 REMARK 3 T TENSOR REMARK 3 T11: 0.1148 T22: -0.2847 REMARK 3 T33: 0.1601 T12: 0.0072 REMARK 3 T13: -0.1115 T23: 0.0606 REMARK 3 L TENSOR REMARK 3 L11: -0.0144 L22: 1.4987 REMARK 3 L33: 2.7106 L12: 0.3980 REMARK 3 L13: 0.7801 L23: 1.6803 REMARK 3 S TENSOR REMARK 3 S11: -0.1154 S12: 0.1831 S13: -0.0999 REMARK 3 S21: 0.1487 S22: 0.1106 S23: -0.1048 REMARK 3 S31: -0.0678 S32: -0.0348 S33: 0.0048 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|1002 - A|1012 } REMARK 3 ORIGIN FOR THE GROUP (A): -13.0103 -6.3113 6.6793 REMARK 3 T TENSOR REMARK 3 T11: -0.0042 T22: -0.0068 REMARK 3 T33: -0.0337 T12: -0.0053 REMARK 3 T13: 0.0699 T23: -0.0208 REMARK 3 L TENSOR REMARK 3 L11: -0.0034 L22: 0.0000 REMARK 3 L33: 0.0034 L12: 0.3600 REMARK 3 L13: 0.1865 L23: -0.1301 REMARK 3 S TENSOR REMARK 3 S11: 0.0030 S12: 0.0086 S13: -0.0111 REMARK 3 S21: -0.0050 S22: -0.0065 S23: 0.0079 REMARK 3 S31: 0.0068 S32: 0.0048 S33: 0.0035 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|1022 - A|1054 } REMARK 3 ORIGIN FOR THE GROUP (A): -16.4900 -26.7051 6.9600 REMARK 3 T TENSOR REMARK 3 T11: -0.0100 T22: 0.0002 REMARK 3 T33: 0.0358 T12: -0.0129 REMARK 3 T13: 0.0512 T23: -0.0038 REMARK 3 L TENSOR REMARK 3 L11: -0.0027 L22: 0.0004 REMARK 3 L33: 0.0027 L12: 0.5174 REMARK 3 L13: 0.1475 L23: -0.1020 REMARK 3 S TENSOR REMARK 3 S11: -0.0008 S12: 0.0022 S13: -0.0205 REMARK 3 S21: -0.0114 S22: -0.0066 S23: 0.0220 REMARK 3 S31: 0.0138 S32: -0.0037 S33: 0.0075 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { A|1062 - A|1161 } REMARK 3 ORIGIN FOR THE GROUP (A): -5.8990 -3.9522 -4.7526 REMARK 3 T TENSOR REMARK 3 T11: 0.0828 T22: 0.1828 REMARK 3 T33: -0.3012 T12: -0.0405 REMARK 3 T13: 0.1555 T23: 0.0637 REMARK 3 L TENSOR REMARK 3 L11: 0.0530 L22: 0.0000 REMARK 3 L33: 1.8117 L12: 0.9641 REMARK 3 L13: -2.9268 L23: 0.2442 REMARK 3 S TENSOR REMARK 3 S11: 0.0111 S12: 0.0129 S13: 0.0304 REMARK 3 S21: 0.0129 S22: -0.0108 S23: 0.0152 REMARK 3 S31: -0.0261 S32: -0.0085 S33: -0.0003 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5TZY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1000224652. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS SEPTEMBER 26, 2012 REMARK 200 DATA SCALING SOFTWARE : AUTOPROC 1.3.0 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9669 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.220 REMARK 200 RESOLUTION RANGE LOW (A) : 90.960 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.22 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.7 REMARK 200 STARTING MODEL: 5TZR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 400, 0.37M POTASSIUM NITRATE, REMARK 280 0.1M MES PH6.5, LIPIDIC CUBIC PHASE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.97500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -12 REMARK 465 ASP A -11 REMARK 465 TYR A -10 REMARK 465 LYS A -9 REMARK 465 ASP A -8 REMARK 465 ASP A -7 REMARK 465 ASP A -6 REMARK 465 ASP A -5 REMARK 465 LYS A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 ALA A -1 REMARK 465 THR A 0 REMARK 465 MET A 1 REMARK 465 VAL A 164 REMARK 465 LEU A 1013 REMARK 465 ARG A 1014 REMARK 465 LEU A 1015 REMARK 465 LYS A 1016 REMARK 465 ILE A 1017 REMARK 465 TYR A 1018 REMARK 465 LYS A 1019 REMARK 465 ASP A 1020 REMARK 465 THR A 1021 REMARK 465 SER A 1038 REMARK 465 ASN A 1055 REMARK 465 GLY A 1056 REMARK 465 VAL A 1057 REMARK 465 ILE A 1058 REMARK 465 THR A 1059 REMARK 465 LYS A 1060 REMARK 465 ASP A 1061 REMARK 465 GLY A 1156 REMARK 465 THR A 1157 REMARK 465 SER A 2213 REMARK 465 LEU A 2279 REMARK 465 GLY A 2280 REMARK 465 ARG A 2281 REMARK 465 GLY A 2282 REMARK 465 PRO A 2283 REMARK 465 GLY A 2284 REMARK 465 LEU A 2285 REMARK 465 LYS A 2286 REMARK 465 THR A 2287 REMARK 465 VAL A 2288 REMARK 465 CYS A 2289 REMARK 465 ALA A 2290 REMARK 465 ALA A 2291 REMARK 465 ARG A 2292 REMARK 465 THR A 2293 REMARK 465 GLN A 2294 REMARK 465 GLY A 2295 REMARK 465 GLY A 2296 REMARK 465 LYS A 2297 REMARK 465 SER A 2298 REMARK 465 GLN A 2299 REMARK 465 LYS A 2300 REMARK 465 ALA A 2301 REMARK 465 GLU A 2302 REMARK 465 ASN A 2303 REMARK 465 LEU A 2304 REMARK 465 TYR A 2305 REMARK 465 PHE A 2306 REMARK 465 GLN A 2307 REMARK 465 GLY A 2308 REMARK 465 HIS A 2309 REMARK 465 HIS A 2310 REMARK 465 HIS A 2311 REMARK 465 HIS A 2312 REMARK 465 HIS A 2313 REMARK 465 HIS A 2314 REMARK 465 HIS A 2315 REMARK 465 HIS A 2316 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 2 CG OD1 OD2 REMARK 470 GLN A 6 CG CD OE1 NE2 REMARK 470 ARG A 28 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 33 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 35 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 37 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 38 CG CD1 CD2 REMARK 470 HIS A 153 CG ND1 CD2 CE1 NE2 REMARK 470 SER A 167 OG REMARK 470 TRP A 174 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 174 CZ3 CH2 REMARK 470 ARG A 211 CG CD NE CZ NH1 NH2 REMARK 470 MET A1006 CG SD CE REMARK 470 ASP A1010 CG OD1 OD2 REMARK 470 GLU A1011 CG CD OE1 OE2 REMARK 470 GLU A1022 CG CD OE1 OE2 REMARK 470 TYR A1024 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR A1025 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE A1027 CG1 CG2 CD1 REMARK 470 ILE A1029 CG1 CG2 CD1 REMARK 470 HIS A1031 CG ND1 CD2 CE1 NE2 REMARK 470 LEU A1032 CG CD1 CD2 REMARK 470 LEU A1033 CG CD1 CD2 REMARK 470 LYS A1035 CG CD CE NZ REMARK 470 GLU A1045 CG CD OE1 OE2 REMARK 470 LYS A1048 CG CD CE NZ REMARK 470 ARG A1052 CG CD NE CZ NH1 NH2 REMARK 470 GLU A1062 CG CD OE1 OE2 REMARK 470 LYS A1065 CG CD CE NZ REMARK 470 LEU A1066 CG CD1 CD2 REMARK 470 GLN A1069 CG CD OE1 NE2 REMARK 470 ASP A1072 CG OD1 OD2 REMARK 470 ARG A1076 CG CD NE CZ NH1 NH2 REMARK 470 ARG A1080 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1083 CG CD CE NZ REMARK 470 ARG A1095 CG CD NE CZ NH1 NH2 REMARK 470 ARG A1096 CG CD NE CZ NH1 NH2 REMARK 470 PHE A1104 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A1108 CG CD OE1 OE2 REMARK 470 VAL A1111 CG1 CG2 REMARK 470 PHE A1114 CG CD1 CD2 CE1 CE2 CZ REMARK 470 THR A1115 OG1 CG2 REMARK 470 ASN A1116 CG OD1 ND2 REMARK 470 LEU A1118 CG CD1 CD2 REMARK 470 ARG A1119 CG CD NE CZ NH1 NH2 REMARK 470 MET A1120 CG SD CE REMARK 470 GLN A1122 CG CD OE1 NE2 REMARK 470 GLN A1123 CG CD OE1 NE2 REMARK 470 LYS A1124 CG CD CE NZ REMARK 470 ARG A1125 CG CD NE CZ NH1 NH2 REMARK 470 GLU A1128 CG CD OE1 OE2 REMARK 470 ASN A1132 CG OD1 ND2 REMARK 470 LYS A1135 CG CD CE NZ REMARK 470 ARG A1137 CG CD NE CZ NH1 NH2 REMARK 470 GLN A1141 CG CD OE1 NE2 REMARK 470 LYS A1147 CG CD CE NZ REMARK 470 ARG A1154 CG CD NE CZ NH1 NH2 REMARK 470 LEU A2214 CG CD1 CD2 REMARK 470 ARG A2217 CG CD NE CZ NH1 NH2 REMARK 470 LYS A2219 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO A 120 CD PRO A 120 N -0.091 REMARK 500 PRO A1037 CD PRO A1037 N 0.199 REMARK 500 PRO A2251 CD PRO A2251 N 0.183 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 73 CB - CA - C ANGL. DEV. = -16.7 DEGREES REMARK 500 ARG A 118 CB - CA - C ANGL. DEV. = -20.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 37 -21.01 -141.80 REMARK 500 ALA A 68 7.29 -64.35 REMARK 500 LEU A 144 -76.38 -126.12 REMARK 500 LEU A 171 -38.53 65.40 REMARK 500 PHE A 191 -47.93 -130.58 REMARK 500 GLU A1011 -72.42 -109.77 REMARK 500 LEU A1033 -74.32 -78.09 REMARK 500 LYS A1135 73.62 -112.68 REMARK 500 CYS A2236 -77.00 -95.88 REMARK 500 VAL A2245 -60.84 -106.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 OLC A 2401 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 2401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MK6 A 2402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 7OS A 2403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5TZR RELATED DB: PDB DBREF 5TZY A 1 211 UNP O14842 FFAR1_HUMAN 1 211 DBREF 5TZY A 1002 1161 UNP P00720 ENLYS_BPT4 2 161 DBREF 5TZY A 2214 2300 UNP O14842 FFAR1_HUMAN 214 300 SEQADV 5TZY MET A -12 UNP O14842 INITIATING METHIONINE SEQADV 5TZY ASP A -11 UNP O14842 EXPRESSION TAG SEQADV 5TZY TYR A -10 UNP O14842 EXPRESSION TAG SEQADV 5TZY LYS A -9 UNP O14842 EXPRESSION TAG SEQADV 5TZY ASP A -8 UNP O14842 EXPRESSION TAG SEQADV 5TZY ASP A -7 UNP O14842 EXPRESSION TAG SEQADV 5TZY ASP A -6 UNP O14842 EXPRESSION TAG SEQADV 5TZY ASP A -5 UNP O14842 EXPRESSION TAG SEQADV 5TZY LYS A -4 UNP O14842 EXPRESSION TAG SEQADV 5TZY GLY A -3 UNP O14842 EXPRESSION TAG SEQADV 5TZY SER A -2 UNP O14842 EXPRESSION TAG SEQADV 5TZY ALA A -1 UNP O14842 EXPRESSION TAG SEQADV 5TZY THR A 0 UNP O14842 EXPRESSION TAG SEQADV 5TZY ALA A 42 UNP O14842 LEU 42 ENGINEERED MUTATION SEQADV 5TZY ALA A 103 UNP O14842 GLY 103 ENGINEERED MUTATION SEQADV 5TZY PHE A 202 UNP O14842 TYR 202 ENGINEERED MUTATION SEQADV 5TZY GLY A 900 UNP O14842 LINKER SEQADV 5TZY SER A 901 UNP O14842 LINKER SEQADV 5TZY GLY A 1012 UNP P00720 ARG 12 ENGINEERED MUTATION SEQADV 5TZY THR A 1054 UNP P00720 CYS 54 ENGINEERED MUTATION SEQADV 5TZY ALA A 1097 UNP P00720 CYS 97 ENGINEERED MUTATION SEQADV 5TZY ARG A 1137 UNP P00720 ILE 137 ENGINEERED MUTATION SEQADV 5TZY GLY A 1162 UNP P00720 LINKER SEQADV 5TZY SER A 2213 UNP P00720 LINKER SEQADV 5TZY ALA A 2301 UNP O14842 EXPRESSION TAG SEQADV 5TZY GLU A 2302 UNP O14842 EXPRESSION TAG SEQADV 5TZY ASN A 2303 UNP O14842 EXPRESSION TAG SEQADV 5TZY LEU A 2304 UNP O14842 EXPRESSION TAG SEQADV 5TZY TYR A 2305 UNP O14842 EXPRESSION TAG SEQADV 5TZY PHE A 2306 UNP O14842 EXPRESSION TAG SEQADV 5TZY GLN A 2307 UNP O14842 EXPRESSION TAG SEQADV 5TZY GLY A 2308 UNP O14842 EXPRESSION TAG SEQADV 5TZY HIS A 2309 UNP O14842 EXPRESSION TAG SEQADV 5TZY HIS A 2310 UNP O14842 EXPRESSION TAG SEQADV 5TZY HIS A 2311 UNP O14842 EXPRESSION TAG SEQADV 5TZY HIS A 2312 UNP O14842 EXPRESSION TAG SEQADV 5TZY HIS A 2313 UNP O14842 EXPRESSION TAG SEQADV 5TZY HIS A 2314 UNP O14842 EXPRESSION TAG SEQADV 5TZY HIS A 2315 UNP O14842 EXPRESSION TAG SEQADV 5TZY HIS A 2316 UNP O14842 EXPRESSION TAG SEQRES 1 A 491 MET ASP TYR LYS ASP ASP ASP ASP LYS GLY SER ALA THR SEQRES 2 A 491 MET ASP LEU PRO PRO GLN LEU SER PHE GLY LEU TYR VAL SEQRES 3 A 491 ALA ALA PHE ALA LEU GLY PHE PRO LEU ASN VAL LEU ALA SEQRES 4 A 491 ILE ARG GLY ALA THR ALA HIS ALA ARG LEU ARG LEU THR SEQRES 5 A 491 PRO SER ALA VAL TYR ALA LEU ASN LEU GLY CYS SER ASP SEQRES 6 A 491 LEU LEU LEU THR VAL SER LEU PRO LEU LYS ALA VAL GLU SEQRES 7 A 491 ALA LEU ALA SER GLY ALA TRP PRO LEU PRO ALA SER LEU SEQRES 8 A 491 CYS PRO VAL PHE ALA VAL ALA HIS PHE PHE PRO LEU TYR SEQRES 9 A 491 ALA GLY GLY GLY PHE LEU ALA ALA LEU SER ALA ALA ARG SEQRES 10 A 491 TYR LEU GLY ALA ALA PHE PRO LEU GLY TYR GLN ALA PHE SEQRES 11 A 491 ARG ARG PRO CYS TYR SER TRP GLY VAL CYS ALA ALA ILE SEQRES 12 A 491 TRP ALA LEU VAL LEU CYS HIS LEU GLY LEU VAL PHE GLY SEQRES 13 A 491 LEU GLU ALA PRO GLY GLY TRP LEU ASP HIS SER ASN THR SEQRES 14 A 491 SER LEU GLY ILE ASN THR PRO VAL ASN GLY SER PRO VAL SEQRES 15 A 491 CYS LEU GLU ALA TRP ASP PRO ALA SER ALA GLY PRO ALA SEQRES 16 A 491 ARG PHE SER LEU SER LEU LEU LEU PHE PHE LEU PRO LEU SEQRES 17 A 491 ALA ILE THR ALA PHE CYS PHE VAL GLY CYS LEU ARG ALA SEQRES 18 A 491 LEU ALA ARG GLY SER ASN ILE PHE GLU MET LEU ARG ILE SEQRES 19 A 491 ASP GLU GLY LEU ARG LEU LYS ILE TYR LYS ASP THR GLU SEQRES 20 A 491 GLY TYR TYR THR ILE GLY ILE GLY HIS LEU LEU THR LYS SEQRES 21 A 491 SER PRO SER LEU ASN ALA ALA LYS SER GLU LEU ASP LYS SEQRES 22 A 491 ALA ILE GLY ARG ASN THR ASN GLY VAL ILE THR LYS ASP SEQRES 23 A 491 GLU ALA GLU LYS LEU PHE ASN GLN ASP VAL ASP ALA ALA SEQRES 24 A 491 VAL ARG GLY ILE LEU ARG ASN ALA LYS LEU LYS PRO VAL SEQRES 25 A 491 TYR ASP SER LEU ASP ALA VAL ARG ARG ALA ALA LEU ILE SEQRES 26 A 491 ASN MET VAL PHE GLN MET GLY GLU THR GLY VAL ALA GLY SEQRES 27 A 491 PHE THR ASN SER LEU ARG MET LEU GLN GLN LYS ARG TRP SEQRES 28 A 491 ASP GLU ALA ALA VAL ASN LEU ALA LYS SER ARG TRP TYR SEQRES 29 A 491 ASN GLN THR PRO ASN ARG ALA LYS ARG VAL ILE THR THR SEQRES 30 A 491 PHE ARG THR GLY THR TRP ASP ALA TYR GLY SER LEU THR SEQRES 31 A 491 HIS ARG ARG LYS LEU ARG ALA ALA TRP VAL ALA GLY GLY SEQRES 32 A 491 ALA LEU LEU THR LEU LEU LEU CYS VAL GLY PRO TYR ASN SEQRES 33 A 491 ALA SER ASN VAL ALA SER PHE LEU TYR PRO ASN LEU GLY SEQRES 34 A 491 GLY SER TRP ARG LYS LEU GLY LEU ILE THR GLY ALA TRP SEQRES 35 A 491 SER VAL VAL LEU ASN PRO LEU VAL THR GLY TYR LEU GLY SEQRES 36 A 491 ARG GLY PRO GLY LEU LYS THR VAL CYS ALA ALA ARG THR SEQRES 37 A 491 GLN GLY GLY LYS SER GLN LYS ALA GLU ASN LEU TYR PHE SEQRES 38 A 491 GLN GLY HIS HIS HIS HIS HIS HIS HIS HIS HET OLC A2401 18 HET MK6 A2402 37 HET 7OS A2403 39 HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETNAM MK6 (5AR,6S,6AS)-3-({2',6'-DIMETHYL-4'-[3-(METHYLSULFONYL) HETNAM 2 MK6 PROPOXY][1,1'-BIPHENYL]-3-YL}METHOXY)-5,5A,6,6A- HETNAM 3 MK6 TETRAHYDROCYCLOPROPA[4,5]CYCLOPENTA[1,2-C]PYRIDINE-6- HETNAM 4 MK6 CARBOXYLIC ACID HETNAM 7OS (2S,3R)-3-CYCLOPROPYL-3-[(2R)-2-(1-{(1S)-1-[5-FLUORO-2- HETNAM 2 7OS (TRIFLUOROMETHOXY)PHENYL]ETHYL}PIPERIDIN-4-YL)-3,4- HETNAM 3 7OS DIHYDRO-2H-1-BENZOPYRAN-7-YL]-2-METHYLPROPANOIC ACID HETSYN OLC 1-OLEOYL-R-GLYCEROL FORMUL 2 OLC C21 H40 O4 FORMUL 3 MK6 C29 H31 N O6 S FORMUL 4 7OS C30 H35 F4 N O4 HELIX 1 AA1 PRO A 4 ARG A 37 1 34 HELIX 2 AA2 THR A 39 VAL A 57 1 19 HELIX 3 AA3 SER A 58 ALA A 68 1 11 HELIX 4 AA4 PRO A 75 SER A 77 5 3 HELIX 5 AA5 LEU A 78 PHE A 110 1 33 HELIX 6 AA6 PHE A 110 ARG A 118 1 9 HELIX 7 AA7 ARG A 119 LEU A 144 1 26 HELIX 8 AA8 ASP A 175 PHE A 191 1 17 HELIX 9 AA9 PHE A 191 GLY A 900 1 22 HELIX 10 AB1 SER A 901 GLU A 1011 1 11 HELIX 11 AB2 PRO A 1037 PRO A 1037 1 1 HELIX 12 AB3 ASN A 1040 GLY A 1051 1 12 HELIX 13 AB4 ALA A 1063 ASN A 1081 1 19 HELIX 14 AB5 LEU A 1084 LEU A 1091 1 8 HELIX 15 AB6 ASP A 1092 MET A 1106 1 15 HELIX 16 AB7 GLY A 1107 PHE A 1114 1 8 HELIX 17 AB8 PHE A 1114 GLN A 1123 1 10 HELIX 18 AB9 ARG A 1125 LYS A 1135 1 11 HELIX 19 AC1 SER A 1136 THR A 1142 1 7 HELIX 20 AC2 THR A 1142 THR A 1155 1 14 HELIX 21 AC3 THR A 2215 CYS A 2236 1 22 HELIX 22 AC4 CYS A 2236 TYR A 2250 1 15 HELIX 23 AC5 GLY A 2254 GLY A 2265 1 12 HELIX 24 AC6 TRP A 2267 GLY A 2277 1 11 SHEET 1 AA1 2 ILE A 160 ASN A 161 0 SHEET 2 AA1 2 VAL A 169 CYS A 170 -1 O VAL A 169 N ASN A 161 SSBOND 1 CYS A 79 CYS A 170 1555 1555 2.03 SITE 1 AC1 2 PHE A 9 GLY A 10 SITE 1 AC2 13 PRO A 80 ALA A 83 PHE A 87 TYR A 91 SITE 2 AC2 13 LEU A 135 LEU A 138 GLY A 139 PHE A 142 SITE 3 AC2 13 LEU A 171 ARG A 183 LEU A 186 TYR A2240 SITE 4 AC2 13 ARG A2258 SITE 1 AC3 15 TYR A 44 TYR A 91 GLY A 95 ALA A 99 SITE 2 AC3 15 TYR A 114 SER A 123 VAL A 126 ILE A 130 SITE 3 AC3 15 LEU A 133 VAL A 134 LEU A 189 LEU A 190 SITE 4 AC3 15 LEU A 193 PRO A 194 ILE A 197 CRYST1 53.880 63.950 90.960 90.00 90.52 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018560 0.000000 0.000168 0.00000 SCALE2 0.000000 0.015637 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010994 0.00000