HEADER TRANSFERASE 22-NOV-16 5U02 TITLE CRYSTAL STRUCTURE OF S. AUREUS TARS 217-571 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOSYL TRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.4.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: SAMEA2236484_00765, SAMEA2384030_00583, SAMEA2384487_01253, SOURCE 5 SAMEA2445549_00791, SAMEA2445572_00749, SAMEA2445608_00472, SOURCE 6 SAMEA2445616_00196, SAMEA2445622_01196, SAMEA2445624_00746, SOURCE 7 SAMEA2445630_01744, SAMEA2445663_00417, SAMEA2445672_00193; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOSYLTRANSFERASE, GT-A, WALL TEICHOIC ACID, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.J.WORRALL,S.SOBHANIFAR,D.T.KING,N.C.STRYNADKA REVDAT 5 06-MAR-24 5U02 1 REMARK REVDAT 4 20-NOV-19 5U02 1 REMARK REVDAT 3 01-NOV-17 5U02 1 REMARK REVDAT 2 20-SEP-17 5U02 1 REMARK REVDAT 1 04-JAN-17 5U02 0 JRNL AUTH S.SOBHANIFAR,L.J.WORRALL,D.T.KING,G.A.WASNEY,L.BAUMANN, JRNL AUTH 2 R.T.GALE,M.NOSELLA,E.D.BROWN,S.G.WITHERS,N.C.STRYNADKA JRNL TITL STRUCTURE AND MECHANISM OF STAPHYLOCOCCUS AUREUS TARS, THE JRNL TITL 2 WALL TEICHOIC ACID BETA-GLYCOSYLTRANSFERASE INVOLVED IN JRNL TITL 3 METHICILLIN RESISTANCE. JRNL REF PLOS PATHOG. V. 12 06067 2016 JRNL REFN ESSN 1553-7374 JRNL PMID 27973583 JRNL DOI 10.1371/JOURNAL.PPAT.1006067 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 23009 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.330 REMARK 3 FREE R VALUE TEST SET COUNT : 1227 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 91.6027 - 4.7850 1.00 2603 135 0.1912 0.2373 REMARK 3 2 4.7850 - 3.7980 0.99 2465 134 0.1915 0.2218 REMARK 3 3 3.7980 - 3.3179 0.97 2373 152 0.2378 0.2807 REMARK 3 4 3.3179 - 3.0145 1.00 2459 142 0.2181 0.2709 REMARK 3 5 3.0145 - 2.7984 1.00 2431 152 0.2238 0.2530 REMARK 3 6 2.7984 - 2.6334 0.95 2352 119 0.3138 0.3585 REMARK 3 7 2.6334 - 2.5015 1.00 2441 115 0.2576 0.2898 REMARK 3 8 2.5015 - 2.3926 0.99 2409 143 0.2586 0.3389 REMARK 3 9 2.3926 - 2.3005 0.93 2249 135 0.2711 0.3294 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.890 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2981 REMARK 3 ANGLE : 0.692 4018 REMARK 3 CHIRALITY : 0.051 442 REMARK 3 PLANARITY : 0.005 514 REMARK 3 DIHEDRAL : 17.185 1800 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 217 THROUGH 256 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.4878 70.4323 -5.4960 REMARK 3 T TENSOR REMARK 3 T11: 0.7334 T22: 1.3770 REMARK 3 T33: 0.9070 T12: 0.0777 REMARK 3 T13: -0.0813 T23: 0.3091 REMARK 3 L TENSOR REMARK 3 L11: 1.3219 L22: 2.2677 REMARK 3 L33: 2.7817 L12: -0.5400 REMARK 3 L13: -1.2967 L23: 0.8203 REMARK 3 S TENSOR REMARK 3 S11: -0.1529 S12: 1.1917 S13: 0.5931 REMARK 3 S21: -0.0036 S22: 0.3697 S23: -0.1497 REMARK 3 S31: 0.3894 S32: 0.0181 S33: -0.3066 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 257 THROUGH 337 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0938 78.3472 2.6173 REMARK 3 T TENSOR REMARK 3 T11: 0.6388 T22: 0.8465 REMARK 3 T33: 0.7864 T12: 0.0118 REMARK 3 T13: -0.0599 T23: 0.2655 REMARK 3 L TENSOR REMARK 3 L11: 3.3102 L22: 1.3175 REMARK 3 L33: 2.4388 L12: -1.0627 REMARK 3 L13: -0.3665 L23: -0.3162 REMARK 3 S TENSOR REMARK 3 S11: 0.1164 S12: 1.0780 S13: 1.3971 REMARK 3 S21: -0.0275 S22: 0.0506 S23: -0.1576 REMARK 3 S31: 0.3390 S32: -0.0768 S33: -0.1354 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 338 THROUGH 357 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.5798 72.8196 7.2683 REMARK 3 T TENSOR REMARK 3 T11: 0.6285 T22: 0.7616 REMARK 3 T33: 0.4945 T12: -0.2318 REMARK 3 T13: -0.1198 T23: 0.2079 REMARK 3 L TENSOR REMARK 3 L11: 0.1759 L22: 0.8665 REMARK 3 L33: 4.1106 L12: -0.3901 REMARK 3 L13: 0.2335 L23: -0.6285 REMARK 3 S TENSOR REMARK 3 S11: -0.2376 S12: 0.8782 S13: 0.4950 REMARK 3 S21: -0.8485 S22: 0.1353 S23: 0.1310 REMARK 3 S31: 0.2303 S32: 0.4753 S33: -0.0121 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 358 THROUGH 445 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5423 58.3958 26.9824 REMARK 3 T TENSOR REMARK 3 T11: 0.2399 T22: 0.2453 REMARK 3 T33: 0.2258 T12: 0.0539 REMARK 3 T13: -0.0247 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 1.6866 L22: 2.3630 REMARK 3 L33: 1.1433 L12: -0.3052 REMARK 3 L13: -0.1763 L23: -0.0232 REMARK 3 S TENSOR REMARK 3 S11: 0.0810 S12: 0.2413 S13: 0.0546 REMARK 3 S21: -0.3309 S22: -0.0455 S23: 0.1046 REMARK 3 S31: -0.0388 S32: -0.0203 S33: -0.0046 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 446 THROUGH 571 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.1527 54.1656 50.7965 REMARK 3 T TENSOR REMARK 3 T11: 0.1701 T22: 0.1640 REMARK 3 T33: 0.2077 T12: 0.0076 REMARK 3 T13: -0.0062 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 1.0105 L22: 0.7738 REMARK 3 L33: 2.3996 L12: -0.4076 REMARK 3 L13: -0.6309 L23: 0.2776 REMARK 3 S TENSOR REMARK 3 S11: -0.0739 S12: -0.1520 S13: -0.0788 REMARK 3 S21: 0.1512 S22: 0.0322 S23: 0.0694 REMARK 3 S31: 0.1490 S32: 0.0358 S33: 0.0345 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5U02 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1000225075. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08B1-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97881 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.23 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23009 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.310 REMARK 200 RESOLUTION RANGE LOW (A) : 52.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 10.70 REMARK 200 R MERGE (I) : 0.14100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.31 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 1.03700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 M IMIDAZOLE (PH 7), THERMOLYSIN, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: TRIMER AS DETERMINED BY SEC-MALS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 48670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 52.84500 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 91.53022 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -52.84500 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 91.53022 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 704 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 761 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 863 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 865 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 873 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 572 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 440 CG CD OE1 OE2 REMARK 470 LYS A 553 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PHE A 476 O HOH A 701 1.86 REMARK 500 OE1 GLU A 380 O HOH A 702 1.97 REMARK 500 O HOH A 831 O HOH A 836 1.99 REMARK 500 O HOH A 823 O HOH A 855 2.04 REMARK 500 O HOH A 819 O HOH A 853 2.07 REMARK 500 O TYR A 453 O HOH A 703 2.10 REMARK 500 OE2 GLU A 316 O HOH A 705 2.14 REMARK 500 O VAL A 293 O HOH A 706 2.16 REMARK 500 OH TYR A 486 O HOH A 707 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 772 O HOH A 856 4556 1.76 REMARK 500 O HOH A 709 O HOH A 824 3565 2.01 REMARK 500 O HOH A 707 O HOH A 707 4556 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 237 -162.58 -165.92 REMARK 500 ASN A 407 -126.28 53.05 REMARK 500 ASN A 467 -0.45 65.43 REMARK 500 ASP A 528 27.32 -140.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMD A 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5TZE RELATED DB: PDB REMARK 900 RELATED ID: 5TZ8 RELATED DB: PDB REMARK 900 RELATED ID: 5TZJ RELATED DB: PDB REMARK 900 RELATED ID: 5TZI RELATED DB: PDB REMARK 900 RELATED ID: 5TZK RELATED DB: PDB DBREF1 5U02 A 217 572 UNP A0A181F8T0_STAAU DBREF2 5U02 A A0A181F8T0 218 573 SEQRES 1 A 356 SER PRO GLU ASP PHE TYR GLU VAL MET ARG LEU ILE ALA SEQRES 2 A 356 VAL GLU ILE LEU ASN ALA ASP LEU GLU GLU ALA HIS LYS SEQRES 3 A 356 ASP GLN ILE LEU ALA GLU PHE LEU ASN ARG HIS PHE SER SEQRES 4 A 356 PHE SER ARG THR ASN GLY PHE SER LEU LYS VAL LYS LEU SEQRES 5 A 356 GLU GLU GLN PRO GLN TRP ILE ASN ALA LEU GLY ASP PHE SEQRES 6 A 356 ILE GLN ALA VAL PRO GLU ARG VAL ASP ALA LEU VAL MET SEQRES 7 A 356 SER LYS LEU ARG PRO LEU LEU HIS TYR ALA ARG ALA LYS SEQRES 8 A 356 ASP ILE ASP ASN TYR ARG THR VAL GLU GLU SER TYR ARG SEQRES 9 A 356 GLN GLY GLN TYR TYR ARG PHE ASP ILE VAL ASP GLY LYS SEQRES 10 A 356 LEU ASN ILE GLN PHE ASN GLU GLY GLU PRO TYR PHE GLU SEQRES 11 A 356 GLY ILE ASP ILE ALA LYS PRO LYS VAL LYS MET THR ALA SEQRES 12 A 356 PHE LYS PHE ASP ASN HIS LYS ILE VAL THR GLU LEU THR SEQRES 13 A 356 LEU ASN GLU PHE MET ILE GLY GLU GLY HIS TYR ASP VAL SEQRES 14 A 356 ARG LEU LYS LEU HIS SER ARG ASN LYS LYS HIS THR MET SEQRES 15 A 356 TYR VAL PRO LEU SER VAL ASN ALA ASN LYS GLN TYR ARG SEQRES 16 A 356 PHE ASN ILE MET LEU GLU ASP ILE LYS ALA TYR LEU PRO SEQRES 17 A 356 LYS GLU LYS ILE TRP ASP VAL PHE LEU GLU VAL GLN ILE SEQRES 18 A 356 GLY THR GLU VAL PHE GLU VAL ARG VAL GLY ASN GLN ARG SEQRES 19 A 356 ASN LYS TYR ALA TYR THR ALA GLU THR SER ALA LEU ILE SEQRES 20 A 356 HIS LEU ASN ASN ASP PHE TYR ARG LEU THR PRO TYR PHE SEQRES 21 A 356 THR LYS ASP PHE ASN ASN ILE SER LEU TYR PHE THR ALA SEQRES 22 A 356 ILE THR LEU THR ASP SER ILE SER MET LYS LEU LYS GLY SEQRES 23 A 356 LYS ASN LYS ILE ILE LEU THR GLY LEU ASP ARG GLY TYR SEQRES 24 A 356 VAL PHE GLU GLU GLY MET ALA SER VAL VAL LEU LYS ASP SEQRES 25 A 356 ASP MET ILE MET GLY MET LEU SER GLN THR SER GLU ASN SEQRES 26 A 356 GLU VAL GLU ILE LEU LEU SER LYS ASP ILE LYS LYS ARG SEQRES 27 A 356 ASP PHE LYS ASN ILE VAL LYS LEU ASN THR ALA HIS MET SEQRES 28 A 356 THR TYR SER LEU LYS HET IMD A 601 5 HETNAM IMD IMIDAZOLE FORMUL 2 IMD C3 H5 N2 1+ FORMUL 3 HOH *179(H2 O) HELIX 1 AA1 SER A 217 ASN A 234 1 18 HELIX 2 AA2 GLU A 238 SER A 257 1 20 HELIX 3 AA3 GLY A 261 VAL A 266 1 6 HELIX 4 AA4 GLN A 271 VAL A 285 1 15 HELIX 5 AA5 PRO A 286 LEU A 292 5 7 HELIX 6 AA6 MET A 294 LYS A 296 5 3 HELIX 7 AA7 LEU A 297 ALA A 306 1 10 HELIX 8 AA8 ASP A 308 GLY A 322 1 15 HELIX 9 AA9 LEU A 416 LYS A 420 1 5 HELIX 10 AB1 TYR A 422 GLU A 426 5 5 HELIX 11 AB2 THR A 491 SER A 495 1 5 HELIX 12 AB3 LYS A 552 LYS A 557 1 6 SHEET 1 AA1 3 ARG A 326 VAL A 330 0 SHEET 2 AA1 3 LYS A 333 GLN A 337 -1 O LYS A 333 N VAL A 330 SHEET 3 AA1 3 PHE A 345 ILE A 348 -1 O ILE A 348 N LEU A 334 SHEET 1 AA2 4 LYS A 354 PHE A 362 0 SHEET 2 AA2 4 LYS A 366 GLU A 375 -1 O VAL A 368 N LYS A 361 SHEET 3 AA2 4 GLN A 409 MET A 415 -1 O ILE A 414 N ILE A 367 SHEET 4 AA2 4 VAL A 404 ALA A 406 -1 N VAL A 404 O ARG A 411 SHEET 1 AA3 4 THR A 397 PRO A 401 0 SHEET 2 AA3 4 ASP A 384 SER A 391 -1 N LEU A 389 O MET A 398 SHEET 3 AA3 4 ILE A 428 ILE A 437 -1 O ASP A 430 N HIS A 390 SHEET 4 AA3 4 GLU A 440 ARG A 445 -1 O VAL A 444 N LEU A 433 SHEET 1 AA4 6 THR A 397 PRO A 401 0 SHEET 2 AA4 6 ASP A 384 SER A 391 -1 N LEU A 389 O MET A 398 SHEET 3 AA4 6 ILE A 428 ILE A 437 -1 O ASP A 430 N HIS A 390 SHEET 4 AA4 6 ILE A 483 ILE A 490 -1 O LEU A 485 N TRP A 429 SHEET 5 AA4 6 ASP A 468 PHE A 476 -1 N THR A 473 O TYR A 486 SHEET 6 AA4 6 ALA A 461 LEU A 465 -1 N LEU A 465 O ASP A 468 SHEET 1 AA5 7 ILE A 496 LYS A 501 0 SHEET 2 AA5 7 LYS A 505 GLY A 510 -1 O LYS A 505 N LYS A 501 SHEET 3 AA5 7 GLU A 542 LEU A 547 -1 O ILE A 545 N ILE A 506 SHEET 4 AA5 7 ASP A 529 SER A 539 -1 N MET A 534 O LEU A 546 SHEET 5 AA5 7 GLY A 520 LEU A 526 -1 N LEU A 526 O ASP A 529 SHEET 6 AA5 7 LYS A 561 ASN A 563 -1 O ASN A 563 N SER A 523 SHEET 7 AA5 7 THR A 568 SER A 570 -1 O TYR A 569 N LEU A 562 SITE 1 AC1 8 GLU A 458 ARG A 471 THR A 473 TYR A 475 SITE 2 AC1 8 TYR A 486 ARG A 513 HOH A 704 HOH A 708 CRYST1 105.690 105.690 80.500 90.00 90.00 120.00 P 3 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009462 0.005463 0.000000 0.00000 SCALE2 0.000000 0.010925 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012422 0.00000