HEADER HYDROLASE 30-NOV-16 5U2O TITLE CRYSTAL STRUCTURE OF ZN-BINDING TRIPLE MUTANT OF GH FAMILY 9 TITLE 2 ENDOGLUCANASE J30 COMPND MOL_ID: 1; COMPND 2 MOLECULE: J30 CCH; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOBACILLUS COMPOSTI KWC4; SOURCE 3 ORGANISM_TAXID: 717605; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOSIDE HYDROLASE, GH9, IG-LIKE DOMAIN, CBM30, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.L.ELLINGHAUS,J.H.PEREIRA,R.P.MCANDREW,D.H.WELNER,P.D.ADAMS REVDAT 6 03-APR-24 5U2O 1 REMARK REVDAT 5 06-MAR-24 5U2O 1 REMARK REVDAT 4 04-DEC-19 5U2O 1 REMARK REVDAT 3 10-APR-19 5U2O 1 REMARK REVDAT 2 18-JUL-18 5U2O 1 JRNL REVDAT 1 30-MAY-18 5U2O 0 JRNL AUTH T.L.ELLINGHAUS,J.H.PEREIRA,R.P.MCANDREW,D.H.WELNER, JRNL AUTH 2 A.M.DEGIOVANNI,J.M.GUENTHER,H.M.TRAN,T.FELDMAN,B.A.SIMMONS, JRNL AUTH 3 K.L.SALE,P.D.ADAMS JRNL TITL ENGINEERING GLYCOSIDE HYDROLASE STABILITY BY THE JRNL TITL 2 INTRODUCTION OF ZINC BINDING. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 74 702 2018 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 29968680 JRNL DOI 10.1107/S2059798318006678 REMARK 2 REMARK 2 RESOLUTION. 1.46 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_2447 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.46 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 70.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 134282 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.140 REMARK 3 R VALUE (WORKING SET) : 0.140 REMARK 3 FREE R VALUE : 0.151 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.490 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 70.5942 - 3.5187 1.00 10213 154 0.1448 0.1380 REMARK 3 2 3.5187 - 2.7928 1.00 9716 148 0.1272 0.1295 REMARK 3 3 2.7928 - 2.4398 1.00 9573 144 0.1238 0.1626 REMARK 3 4 2.4398 - 2.2167 1.00 9494 144 0.1179 0.1355 REMARK 3 5 2.2167 - 2.0578 1.00 9477 142 0.1227 0.1312 REMARK 3 6 2.0578 - 1.9365 1.00 9413 143 0.1293 0.1515 REMARK 3 7 1.9365 - 1.8395 1.00 9409 142 0.1319 0.1367 REMARK 3 8 1.8395 - 1.7594 1.00 9351 142 0.1391 0.1498 REMARK 3 9 1.7594 - 1.6917 1.00 9321 141 0.1481 0.1945 REMARK 3 10 1.6917 - 1.6333 0.99 9338 141 0.1580 0.1879 REMARK 3 11 1.6333 - 1.5822 0.99 9263 140 0.1721 0.2070 REMARK 3 12 1.5822 - 1.5370 0.99 9261 140 0.1875 0.1687 REMARK 3 13 1.5370 - 1.4965 0.99 9222 140 0.2047 0.2081 REMARK 3 14 1.4965 - 1.4600 0.99 9231 139 0.2281 0.2498 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 13.340 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4586 REMARK 3 ANGLE : 0.924 6264 REMARK 3 CHIRALITY : 0.076 646 REMARK 3 PLANARITY : 0.007 842 REMARK 3 DIHEDRAL : 16.364 1669 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 12.5623 33.1542 -12.5824 REMARK 3 T TENSOR REMARK 3 T11: 0.0506 T22: 0.1160 REMARK 3 T33: 0.1053 T12: -0.0104 REMARK 3 T13: -0.0014 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.4574 L22: 0.4282 REMARK 3 L33: 0.6409 L12: -0.0387 REMARK 3 L13: 0.1409 L23: -0.1762 REMARK 3 S TENSOR REMARK 3 S11: -0.0056 S12: -0.0294 S13: -0.0555 REMARK 3 S21: -0.0432 S22: 0.0177 S23: -0.0165 REMARK 3 S31: 0.0396 S32: -0.0145 S33: 0.0074 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5U2O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1000224816. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9774 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 0.3.8.0 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 134366 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.460 REMARK 200 RESOLUTION RANGE LOW (A) : 70.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 21.50 REMARK 200 R MERGE (I) : 0.13800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.46 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 21.70 REMARK 200 R MERGE FOR SHELL (I) : 1.70400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: J30 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRISODIUM CITRATE DIHYDRATE, 2 REMARK 280 -PROPANOL, PEG 10,000, PH 5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 210.88000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 105.44000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 158.16000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 52.72000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 263.60000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 210.88000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 105.44000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 52.72000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 158.16000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 263.60000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 544 REMARK 465 SER A 545 REMARK 465 GLY A 546 REMARK 465 GLU A 547 REMARK 465 ASN A 548 REMARK 465 LEU A 549 REMARK 465 TYR A 550 REMARK 465 PHE A 551 REMARK 465 GLN A 552 REMARK 465 GLY A 553 REMARK 465 TRP A 554 REMARK 465 SER A 555 REMARK 465 HIS A 556 REMARK 465 PRO A 557 REMARK 465 GLN A 558 REMARK 465 PHE A 559 REMARK 465 GLU A 560 REMARK 465 LYS A 561 REMARK 465 ASN A 562 REMARK 465 SER A 563 REMARK 465 ALA A 564 REMARK 465 VAL A 565 REMARK 465 ASP A 566 REMARK 465 GLY A 567 REMARK 465 SER A 568 REMARK 465 GLY A 569 REMARK 465 HIS A 570 REMARK 465 HIS A 571 REMARK 465 HIS A 572 REMARK 465 HIS A 573 REMARK 465 HIS A 574 REMARK 465 HIS A 575 REMARK 465 HIS A 576 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1248 O HOH A 1379 1.91 REMARK 500 O HOH A 1201 O HOH A 1254 1.92 REMARK 500 O HOH A 1302 O HOH A 1410 1.95 REMARK 500 O HOH A 836 O HOH A 1026 1.97 REMARK 500 O HOH A 770 O HOH A 782 1.99 REMARK 500 O HOH A 1080 O HOH A 1163 2.03 REMARK 500 O HOH A 736 O HOH A 1330 2.03 REMARK 500 O HOH A 1329 O HOH A 1408 2.03 REMARK 500 O HOH A 919 O HOH A 1317 2.03 REMARK 500 O HOH A 1205 O HOH A 1292 2.04 REMARK 500 O HOH A 1107 O HOH A 1132 2.04 REMARK 500 O HOH A 1305 O HOH A 1466 2.05 REMARK 500 O HOH A 934 O HOH A 1268 2.07 REMARK 500 O HOH A 867 O HOH A 1101 2.09 REMARK 500 O HOH A 935 O HOH A 1085 2.09 REMARK 500 O HOH A 1345 O HOH A 1445 2.10 REMARK 500 O HOH A 995 O HOH A 1309 2.11 REMARK 500 O HOH A 1007 O HOH A 1145 2.12 REMARK 500 O HOH A 745 O HOH A 1466 2.13 REMARK 500 O HOH A 1154 O HOH A 1417 2.13 REMARK 500 O HOH A 1248 O HOH A 1480 2.15 REMARK 500 O HOH A 1278 O HOH A 1380 2.15 REMARK 500 O HOH A 1391 O HOH A 1394 2.17 REMARK 500 O HOH A 722 O HOH A 1167 2.18 REMARK 500 O HOH A 1212 O HOH A 1253 2.18 REMARK 500 OE1 GLU A 344 O HOH A 701 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 145 -124.81 -154.79 REMARK 500 LEU A 244 118.39 -171.05 REMARK 500 ASP A 311 17.34 -156.18 REMARK 500 ASN A 354 101.88 -163.25 REMARK 500 ALA A 428 79.15 -151.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1496 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH A1497 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH A1498 DISTANCE = 7.01 ANGSTROMS REMARK 525 HOH A1499 DISTANCE = 7.09 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 606 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 98 SG REMARK 620 2 CYS A 114 SG 123.3 REMARK 620 3 HIS A 115 ND1 105.5 111.0 REMARK 620 4 HIS A 143 NE2 100.4 103.9 112.3 REMARK 620 N 1 2 3 REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. STRANDS 1, 2 AND 3 OF SHEETS AA2 REMARK 700 AND AA3 ARE IDENTICAL. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FLC A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 606 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5U0H RELATED DB: PDB REMARK 900 5U0H IS THE WILD-TYPE ENZYME TO THIS TRIPLE MUTANT DBREF 5U2O A 1 576 PDB 5U2O 5U2O 1 576 SEQRES 1 A 576 MET LEU PRO GLU PHE PRO LYS ILE ALA VAL VAL ALA GLY SEQRES 2 A 576 SER GLU ALA GLU SER VAL PHE ARG VAL VAL ASP ILE GLY SEQRES 3 A 576 THR GLY ASP VAL VAL TYR GLU GLY ARG LEU SER ASP SER SEQRES 4 A 576 VAL TYR ASP ASP ALA SER GLY ASP THR VAL ARG HIS ALA SEQRES 5 A 576 ASP PHE GLY GLU TRP LYS ARG PRO GLY SER TYR SER VAL SEQRES 6 A 576 THR VAL GLY ARG SER SER SER ALA PRO PHE ARG ILE GLY SEQRES 7 A 576 ASN ASP VAL TYR ARG ALA PRO LEU ILE GLN ALA ALA ARG SEQRES 8 A 576 SER TYR THR LEU ALA ARG CYS GLY VAL ALA ILE ASP ASP SEQRES 9 A 576 PRO VAL THR GLY LEU ARG HIS ASP VAL CYS HIS ALA GLN SEQRES 10 A 576 ASP LYS GLN ALA MET LEU PHE PHE GLU ASP PRO PHE HIS SEQRES 11 A 576 ARG GLN GLY ASP PRO ILE ASP VAL SER GLY GLY TRP HIS SEQRES 12 A 576 ASP ALA GLY ASP TYR GLY LYS TYR VAL PRO THR GLY ALA SEQRES 13 A 576 VAL ALA ALA ALA GLN LEU MET LEU ALA TRP GLU MET ARG SEQRES 14 A 576 PRO GLU LEU TRP ARG SER LEU SER LEU SER LEU PRO ALA SEQRES 15 A 576 GLY LEU SER GLU PRO GLU ARG ARG ALA GLY LEU PRO ASP SEQRES 16 A 576 LEU LEU VAL GLU ILE LYS TYR GLU LEU ASP TRP LEU LEU SEQRES 17 A 576 ARG MET GLN ARG PRO ASP GLY ALA VAL TYR LEU LYS VAL SEQRES 18 A 576 ALA GLY GLY ALA TRP PRO GLY TYR ILE ARG PRO GLU GLU SEQRES 19 A 576 ASP THR ALA ASP ARG TYR VAL PHE GLY LEU SER THR TYR SEQRES 20 A 576 GLY THR ALA GLN PHE ALA GLY ALA ALA ALA MET GLY ALA SEQRES 21 A 576 ARG VAL TYR ALA PRO PHE LEU PRO ASP TYR ALA ARG LYS SEQRES 22 A 576 LEU LEU ASP ALA ALA ILE ARG ALA GLN ARG TYR LEU GLU SEQRES 23 A 576 GLN HIS PRO ASP PRO GLU PHE ARG TYR ASP GLU GLY GLN SEQRES 24 A 576 ASN ASN GLY SER GLY PRO TYR GLU LYS ARG THR ASP ARG SEQRES 25 A 576 GLU GLU ARG PHE TRP ALA ALA ALA GLU LEU LEU ARG THR SEQRES 26 A 576 THR ASP ASP ALA ARG TYR ASP ALA TYR ILE ARG GLU HIS SEQRES 27 A 576 PHE SER ASP PHE LEU GLU GLY LYS THR SER ALA VAL PHE SEQRES 28 A 576 TRP GLY ASN THR VAL LEU LEU GLY GLN TRP ALA TYR VAL SEQRES 29 A 576 ASN ALA GLU ARG ALA ASP ALA ASP HIS LYS ALA SER VAL SEQRES 30 A 576 ARG ALA SER LEU THR ALA TYR ALA ASP GLU LEU VAL ARG SEQRES 31 A 576 TRP ALA SER ALA ASN GLY TYR ARG SER VAL LEU ARG PRO SEQRES 32 A 576 THR ASP TYR PHE TRP GLY SER ALA ARG GLU ALA MET GLY SEQRES 33 A 576 ARG ALA GLN ALA LEU LEU LEU ALA ASP ALA VAL ALA PRO SEQRES 34 A 576 ASN ARG ALA TYR LEU GLU THR ALA LEU ASP GLN ALA HIS SEQRES 35 A 576 TRP LEU PHE GLY ARG ASN ALA ALA GLY THR SER PHE MET SEQRES 36 A 576 THR GLY ILE GLY MET HIS SER PRO GLN LYS PRO HIS HIS SEQRES 37 A 576 ARG LEU VAL ALA SER THR GLN THR LEU ILE PRO GLY LEU SEQRES 38 A 576 VAL VAL GLY GLY PRO ASN ALA GLN GLY GLY ASP PRO ILE SEQRES 39 A 576 MET ASP ARG LEU LEU ARG GLU SER ASP PRO ARG VAL PHE SEQRES 40 A 576 PRO ALA LYS ALA TYR VAL ASP ASP TRP GLU ALA TYR SER SEQRES 41 A 576 VAL ASN GLU PRO ALA ILE ASP TYR THR ALA PRO ALA VAL SEQRES 42 A 576 PHE VAL LEU THR ARG PHE ALA GLU ASP ARG GLY SER GLY SEQRES 43 A 576 GLU ASN LEU TYR PHE GLN GLY TRP SER HIS PRO GLN PHE SEQRES 44 A 576 GLU LYS ASN SER ALA VAL ASP GLY SER GLY HIS HIS HIS SEQRES 45 A 576 HIS HIS HIS HIS HET FLC A 601 18 HET GOL A 602 14 HET GOL A 603 14 HET GOL A 604 14 HET GOL A 605 14 HET ZN A 606 1 HETNAM FLC CITRATE ANION HETNAM GOL GLYCEROL HETNAM ZN ZINC ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 FLC C6 H5 O7 3- FORMUL 3 GOL 4(C3 H8 O3) FORMUL 7 ZN ZN 2+ FORMUL 8 HOH *799(H2 O) HELIX 1 AA1 TYR A 82 ALA A 96 1 15 HELIX 2 AA2 HIS A 115 GLN A 120 5 6 HELIX 3 AA3 TYR A 151 MET A 168 1 18 HELIX 4 AA4 PRO A 170 SER A 175 1 6 HELIX 5 AA5 SER A 185 GLY A 192 1 8 HELIX 6 AA6 PRO A 194 MET A 210 1 17 HELIX 7 AA8 SER A 245 ALA A 264 1 20 HELIX 8 AA9 LEU A 267 HIS A 288 1 22 HELIX 9 AB1 ASP A 311 ASP A 327 1 17 HELIX 10 AB2 ALA A 329 HIS A 338 1 10 HELIX 11 AB3 SER A 340 GLY A 345 1 6 HELIX 12 AB4 THR A 355 ASN A 365 1 11 HELIX 13 AB5 ASP A 370 ASN A 395 1 26 HELIX 14 AB7 GLY A 409 ALA A 428 1 20 HELIX 15 AB8 ASN A 430 GLY A 446 1 17 HELIX 16 AB9 HIS A 468 GLN A 475 1 8 HELIX 17 AC1 ASP A 492 SER A 502 1 11 HELIX 18 AC2 ALA A 518 ASN A 522 1 5 HELIX 19 AC3 ALA A 525 ALA A 540 1 16 SHEET 1 AA1 3 LYS A 7 GLY A 13 0 SHEET 2 AA1 3 ASP A 47 PHE A 54 -1 N PHE A 54 O LYS A 7 SHEET 3 AA1 3 VAL A 40 ASP A 42 -1 O ASP A 47 N ASP A 42 SHEET 1 AA2 4 TYR A 32 LEU A 36 0 SHEET 2 AA2 4 SER A 18 ILE A 25 -1 O SER A 18 N LEU A 36 SHEET 3 AA2 4 GLY A 61 VAL A 67 -1 O SER A 62 N ILE A 25 SHEET 4 AA2 4 SER A 70 SER A 72 -1 N SER A 72 O VAL A 65 SHEET 1 AA3 4 TYR A 32 LEU A 36 0 SHEET 2 AA3 4 SER A 18 ILE A 25 -1 O SER A 18 N LEU A 36 SHEET 3 AA3 4 GLY A 61 VAL A 67 -1 O SER A 62 N ILE A 25 SHEET 4 AA3 4 PHE A 75 ILE A 77 -1 N PHE A 75 O TYR A 63 SHEET 1 AA4 2 ILE A 102 ASP A 104 0 SHEET 2 AA4 2 LEU A 109 HIS A 111 -1 O LEU A 109 N ASP A 104 SHEET 1 AA5 4 ASP A 134 ILE A 136 0 SHEET 2 AA5 4 ALA A 121 PHE A 124 -1 O ALA A 121 N ILE A 136 SHEET 3 AA5 4 ARG A 239 PHE A 242 1 O ARG A 239 N MET A 122 SHEET 4 AA5 4 LYS A 220 ALA A 222 -1 O ALA A 222 N TYR A 240 LINK SG CYS A 98 ZN ZN A 606 1555 1555 2.32 LINK SG CYS A 114 ZN ZN A 606 1555 1555 2.36 LINK ND1 HIS A 115 ZN ZN A 606 1555 1555 2.08 LINK NE2 HIS A 143 ZN ZN A 606 1555 1555 2.09 CISPEP 1 ASP A 503 PRO A 504 0 2.37 SITE 1 AC1 8 MET A 1 PHE A 75 ARG A 76 VAL A 81 SITE 2 AC1 8 TYR A 82 HIS A 442 HOH A 741 HOH A1093 SITE 1 AC2 8 ALA A 260 ARG A 272 HOH A 856 HOH A 873 SITE 2 AC2 8 HOH A1089 HOH A1092 HOH A1125 HOH A1141 SITE 1 AC3 7 TRP A 352 TYR A 528 HOH A 755 HOH A 776 SITE 2 AC3 7 HOH A 814 HOH A 842 HOH A 892 SITE 1 AC4 4 HIS A 467 ARG A 469 HOH A 717 HOH A1239 SITE 1 AC5 5 PHE A 129 ARG A 505 HOH A 703 HOH A 833 SITE 2 AC5 5 HOH A1178 SITE 1 AC6 4 CYS A 98 CYS A 114 HIS A 115 HIS A 143 CRYST1 90.960 90.960 316.320 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010994 0.006347 0.000000 0.00000 SCALE2 0.000000 0.012695 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003161 0.00000