data_5U37 # _entry.id 5U37 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.290 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5U37 WWPDB D_1000225201 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2018-03-07 _pdbx_database_PDB_obs_spr.pdb_id 6CJ9 _pdbx_database_PDB_obs_spr.replace_pdb_id 5U37 _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5U37 _pdbx_database_status.recvd_initial_deposition_date 2016-12-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Pinto-Junior, V.R.' 1 ? 'Santiago, M.Q.' 2 ? 'Osterne, V.J.S.' 3 ? 'Araripe, D.A.' 4 ? 'Neco, A.H.B.' 5 ? 'Silva-Filho, J.C.' 6 ? 'Leal, R.B.' 7 ? 'Rocha, C.R.C.' 8 ? 'Nascimento, K.S.' 9 ? 'Cavada, B.S.' 10 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of lectin from Dioclea lasiophylla seeds (DlyL) complexed with X-Man' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Pinto-Junior, V.R.' 1 primary 'Santiago, M.Q.' 2 primary 'Osterne, V.J.S.' 3 primary 'Araripe, D.A.' 4 primary 'Neco, A.H.B.' 5 primary 'Silva-Filho, J.C.' 6 primary 'Leal, R.B.' 7 primary 'Rocha, C.R.C.' 8 primary 'Nascimento, K.S.' 9 primary 'Cavada, B.S.' 10 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5U37 _cell.details ? _cell.formula_units_Z ? _cell.length_a 64.100 _cell.length_a_esd ? _cell.length_b 86.930 _cell.length_b_esd ? _cell.length_c 92.820 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5U37 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Dioclea lasiophylla seed lectin' 25407.031 1 ? ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 non-polymer syn 'MANGANESE (II) ION' 54.938 1 ? ? ? ? 4 non-polymer man '(2R,3S,4S,5S,6R)-2-(5-BROMO-4-CHLORO-1H-INDOL-3-YLOXY)-TETRAHYDRO-6-(HYDROXYMETHYL)-2H-PYRAN-3,4,5-TRIOL' 408.629 1 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 5 ? ? ? ? 6 water nat water 18.015 143 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ADTIVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQTGKVGTAHISYNSVAKRLSAVVSYSGTSSTTVSYDVD LNNVLPEWVRVGLSATTGLYKETNTILSWSFTSKLKTNSIADANSLHFSFSNFSQNPKDLILQGDATTDSDGNLQLTRVS SDGSPQGSSVGRALFYAPVHIWEKSAVVASFDATFTFLIKSPDRDPADGITFFIANTDTSIPSGSGGRLLGLFPDAN ; _entity_poly.pdbx_seq_one_letter_code_can ;ADTIVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQTGKVGTAHISYNSVAKRLSAVVSYSGTSSTTVSYDVD LNNVLPEWVRVGLSATTGLYKETNTILSWSFTSKLKTNSIADANSLHFSFSNFSQNPKDLILQGDATTDSDGNLQLTRVS SDGSPQGSSVGRALFYAPVHIWEKSAVVASFDATFTFLIKSPDRDPADGITFFIANTDTSIPSGSGGRLLGLFPDAN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASP n 1 3 THR n 1 4 ILE n 1 5 VAL n 1 6 ALA n 1 7 VAL n 1 8 GLU n 1 9 LEU n 1 10 ASP n 1 11 SER n 1 12 TYR n 1 13 PRO n 1 14 ASN n 1 15 THR n 1 16 ASP n 1 17 ILE n 1 18 GLY n 1 19 ASP n 1 20 PRO n 1 21 SER n 1 22 TYR n 1 23 PRO n 1 24 HIS n 1 25 ILE n 1 26 GLY n 1 27 ILE n 1 28 ASP n 1 29 ILE n 1 30 LYS n 1 31 SER n 1 32 ILE n 1 33 ARG n 1 34 SER n 1 35 LYS n 1 36 SER n 1 37 THR n 1 38 ALA n 1 39 ARG n 1 40 TRP n 1 41 ASN n 1 42 MET n 1 43 GLN n 1 44 THR n 1 45 GLY n 1 46 LYS n 1 47 VAL n 1 48 GLY n 1 49 THR n 1 50 ALA n 1 51 HIS n 1 52 ILE n 1 53 SER n 1 54 TYR n 1 55 ASN n 1 56 SER n 1 57 VAL n 1 58 ALA n 1 59 LYS n 1 60 ARG n 1 61 LEU n 1 62 SER n 1 63 ALA n 1 64 VAL n 1 65 VAL n 1 66 SER n 1 67 TYR n 1 68 SER n 1 69 GLY n 1 70 THR n 1 71 SER n 1 72 SER n 1 73 THR n 1 74 THR n 1 75 VAL n 1 76 SER n 1 77 TYR n 1 78 ASP n 1 79 VAL n 1 80 ASP n 1 81 LEU n 1 82 ASN n 1 83 ASN n 1 84 VAL n 1 85 LEU n 1 86 PRO n 1 87 GLU n 1 88 TRP n 1 89 VAL n 1 90 ARG n 1 91 VAL n 1 92 GLY n 1 93 LEU n 1 94 SER n 1 95 ALA n 1 96 THR n 1 97 THR n 1 98 GLY n 1 99 LEU n 1 100 TYR n 1 101 LYS n 1 102 GLU n 1 103 THR n 1 104 ASN n 1 105 THR n 1 106 ILE n 1 107 LEU n 1 108 SER n 1 109 TRP n 1 110 SER n 1 111 PHE n 1 112 THR n 1 113 SER n 1 114 LYS n 1 115 LEU n 1 116 LYS n 1 117 THR n 1 118 ASN n 1 119 SER n 1 120 ILE n 1 121 ALA n 1 122 ASP n 1 123 ALA n 1 124 ASN n 1 125 SER n 1 126 LEU n 1 127 HIS n 1 128 PHE n 1 129 SER n 1 130 PHE n 1 131 SER n 1 132 ASN n 1 133 PHE n 1 134 SER n 1 135 GLN n 1 136 ASN n 1 137 PRO n 1 138 LYS n 1 139 ASP n 1 140 LEU n 1 141 ILE n 1 142 LEU n 1 143 GLN n 1 144 GLY n 1 145 ASP n 1 146 ALA n 1 147 THR n 1 148 THR n 1 149 ASP n 1 150 SER n 1 151 ASP n 1 152 GLY n 1 153 ASN n 1 154 LEU n 1 155 GLN n 1 156 LEU n 1 157 THR n 1 158 ARG n 1 159 VAL n 1 160 SER n 1 161 SER n 1 162 ASP n 1 163 GLY n 1 164 SER n 1 165 PRO n 1 166 GLN n 1 167 GLY n 1 168 SER n 1 169 SER n 1 170 VAL n 1 171 GLY n 1 172 ARG n 1 173 ALA n 1 174 LEU n 1 175 PHE n 1 176 TYR n 1 177 ALA n 1 178 PRO n 1 179 VAL n 1 180 HIS n 1 181 ILE n 1 182 TRP n 1 183 GLU n 1 184 LYS n 1 185 SER n 1 186 ALA n 1 187 VAL n 1 188 VAL n 1 189 ALA n 1 190 SER n 1 191 PHE n 1 192 ASP n 1 193 ALA n 1 194 THR n 1 195 PHE n 1 196 THR n 1 197 PHE n 1 198 LEU n 1 199 ILE n 1 200 LYS n 1 201 SER n 1 202 PRO n 1 203 ASP n 1 204 ARG n 1 205 ASP n 1 206 PRO n 1 207 ALA n 1 208 ASP n 1 209 GLY n 1 210 ILE n 1 211 THR n 1 212 PHE n 1 213 PHE n 1 214 ILE n 1 215 ALA n 1 216 ASN n 1 217 THR n 1 218 ASP n 1 219 THR n 1 220 SER n 1 221 ILE n 1 222 PRO n 1 223 SER n 1 224 GLY n 1 225 SER n 1 226 GLY n 1 227 GLY n 1 228 ARG n 1 229 LEU n 1 230 LEU n 1 231 GLY n 1 232 LEU n 1 233 PHE n 1 234 PRO n 1 235 ASP n 1 236 ALA n 1 237 ASN n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 237 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Dioclea lasiophylla' _entity_src_nat.pdbx_ncbi_taxonomy_id 1457464 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5U37 _struct_ref.pdbx_db_accession 5U37 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5U37 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 237 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5U37 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 237 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 237 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 XMM D-saccharide . '(2R,3S,4S,5S,6R)-2-(5-BROMO-4-CHLORO-1H-INDOL-3-YLOXY)-TETRAHYDRO-6-(HYDROXYMETHYL)-2H-PYRAN-3,4,5-TRIOL' '(5-BROMO-4-CHLORO-3-INDOLYL)-A-D-MANNOSE' 'C14 H15 Br Cl N O6' 408.629 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5U37 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.54 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 51.66 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.8 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;100 mM HEPES pH 6.8 8% PEG 6000 ; _exptl_crystal_grow.pdbx_pH_range 6.8-7.8 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 2M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-10-26 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.42 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'LNLS BEAMLINE W01B-MX2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.42 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline W01B-MX2 _diffrn_source.pdbx_synchrotron_site LNLS # _reflns.B_iso_Wilson_estimate 20.010 _reflns.entry_id 5U37 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.700 _reflns.d_resolution_low 27.860 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all 28693 _reflns.number_obs 28693 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.400 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.400 _reflns.pdbx_Rmerge_I_obs 0.085 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.085 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.400 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.094 _reflns.pdbx_Rpim_I_all 0.039 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 155085 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.996 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.700 1.790 ? ? ? ? ? ? ? 98.800 ? ? ? ? 0.522 ? ? ? ? ? ? ? ? 4.100 ? ? ? ? ? ? ? 1 1 0.799 ? 5.380 27.860 ? ? ? ? ? ? ? 99.200 ? ? ? ? 0.041 ? ? ? ? ? ? ? ? 5.900 ? ? ? ? ? ? ? 2 1 0.998 ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 55.240 _refine.B_iso_mean 24.8533 _refine.B_iso_min 11.440 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5U37 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.7000 _refine.ls_d_res_low 27.860 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 28542 _refine.ls_number_reflns_R_free 1385 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.7900 _refine.ls_percent_reflns_R_free 4.8500 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1943 _refine.ls_R_factor_R_free 0.2137 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1933 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.330 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2JE7 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.8100 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1900 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.7000 _refine_hist.d_res_low 27.860 _refine_hist.pdbx_number_atoms_ligand 55 _refine_hist.number_atoms_solvent 143 _refine_hist.number_atoms_total 1992 _refine_hist.pdbx_number_residues_total 237 _refine_hist.pdbx_B_iso_mean_ligand 35.30 _refine_hist.pdbx_B_iso_mean_solvent 32.21 _refine_hist.pdbx_number_atoms_protein 1794 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? 1884 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.955 ? 2565 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.062 ? 296 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 ? 324 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 12.135 ? 652 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.7000 1.7608 2662 . 145 2517 94.0000 . . . 0.3451 0.0000 0.3243 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 1.7608 1.8312 2813 . 157 2656 98.0000 . . . 0.2597 0.0000 0.2418 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 1.8312 1.9146 2815 . 125 2690 99.0000 . . . 0.2417 0.0000 0.2177 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 1.9146 2.0155 2834 . 126 2708 99.0000 . . . 0.2305 0.0000 0.1937 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 2.0155 2.1417 2829 . 142 2687 99.0000 . . . 0.2169 0.0000 0.1895 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 2.1417 2.3070 2876 . 138 2738 99.0000 . . . 0.2289 0.0000 0.1907 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 2.3070 2.5390 2869 . 142 2727 100.0000 . . . 0.2369 0.0000 0.2068 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 2.5390 2.9061 2892 . 140 2752 100.0000 . . . 0.2509 0.0000 0.2073 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 2.9061 3.6601 2905 . 152 2753 99.0000 . . . 0.1955 0.0000 0.1795 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 3.6601 27.8676 3047 . 118 2929 100.0000 . . . 0.1684 0.0000 0.1733 . . . . . . 10 . . . # _struct.entry_id 5U37 _struct.title 'Crystal structure of lectin from Dioclea lasiophylla seeds (DlyL) complexed with X-Man' _struct.pdbx_descriptor 'Dioclea lasiophylla seed lectin' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5U37 _struct_keywords.text 'Lectin, X-Man, PLANT PROTEIN' _struct_keywords.pdbx_keywords 'PLANT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 14 ? GLY A 18 ? ASN A 14 GLY A 18 5 ? 5 HELX_P HELX_P2 AA2 ASP A 80 ? LEU A 85 ? ASP A 80 LEU A 85 1 ? 6 HELX_P HELX_P3 AA3 GLY A 226 ? LEU A 230 ? GLY A 226 LEU A 230 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A GLU 8 OE2 ? ? ? 1_555 C MN . MN ? ? A GLU 8 A MN 302 1_555 ? ? ? ? ? ? ? 2.116 ? metalc2 metalc ? ? A ASP 10 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 10 A CA 301 1_555 ? ? ? ? ? ? ? 2.411 ? metalc3 metalc ? ? A ASP 10 OD2 ? ? ? 1_555 C MN . MN ? ? A ASP 10 A MN 302 1_555 ? ? ? ? ? ? ? 2.065 ? metalc4 metalc ? ? A ASP 10 OD2 ? ? ? 1_555 B CA . CA ? ? A ASP 10 A CA 301 1_555 ? ? ? ? ? ? ? 2.505 ? metalc5 metalc ? ? A TYR 12 O ? ? ? 1_555 B CA . CA ? ? A TYR 12 A CA 301 1_555 ? ? ? ? ? ? ? 2.355 ? metalc6 metalc ? ? A ASN 14 OD1 ? ? ? 1_555 B CA . CA ? ? A ASN 14 A CA 301 1_555 ? ? ? ? ? ? ? 2.332 ? metalc7 metalc ? ? A ASP 19 OD1 ? ? ? 1_555 C MN . MN ? ? A ASP 19 A MN 302 1_555 ? ? ? ? ? ? ? 2.244 ? metalc8 metalc ? ? A ASP 19 OD2 ? ? ? 1_555 B CA . CA ? ? A ASP 19 A CA 301 1_555 ? ? ? ? ? ? ? 2.328 ? metalc9 metalc ? ? A HIS 24 NE2 ? ? ? 1_555 C MN . MN ? ? A HIS 24 A MN 302 1_555 ? ? ? ? ? ? ? 2.067 ? metalc10 metalc ? ? B CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 301 A HOH 477 1_555 ? ? ? ? ? ? ? 2.345 ? metalc11 metalc ? ? B CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 301 A HOH 434 1_555 ? ? ? ? ? ? ? 2.415 ? metalc12 metalc ? ? C MN . MN ? ? ? 1_555 J HOH . O ? ? A MN 302 A HOH 429 1_555 ? ? ? ? ? ? ? 2.087 ? metalc13 metalc ? ? C MN . MN ? ? ? 1_555 J HOH . O ? ? A MN 302 A HOH 418 1_555 ? ? ? ? ? ? ? 2.092 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ALA _struct_mon_prot_cis.label_seq_id 207 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ALA _struct_mon_prot_cis.auth_seq_id 207 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 ASP _struct_mon_prot_cis.pdbx_label_seq_id_2 208 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 ASP _struct_mon_prot_cis.pdbx_auth_seq_id_2 208 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 5.72 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 6 ? AA3 ? 6 ? AA4 ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA4 5 6 ? anti-parallel AA4 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 36 ? ARG A 39 ? SER A 36 ARG A 39 AA1 2 HIS A 24 ? ILE A 29 ? HIS A 24 ILE A 29 AA1 3 ILE A 4 ? ASP A 10 ? ILE A 4 ASP A 10 AA1 4 GLY A 209 ? ASN A 216 ? GLY A 209 ASN A 216 AA1 5 TRP A 88 ? THR A 96 ? TRP A 88 THR A 96 AA1 6 VAL A 170 ? PHE A 175 ? VAL A 170 PHE A 175 AA1 7 LEU A 140 ? GLY A 144 ? LEU A 140 GLY A 144 AA2 1 SER A 36 ? ARG A 39 ? SER A 36 ARG A 39 AA2 2 HIS A 24 ? ILE A 29 ? HIS A 24 ILE A 29 AA2 3 ILE A 4 ? ASP A 10 ? ILE A 4 ASP A 10 AA2 4 GLY A 209 ? ASN A 216 ? GLY A 209 ASN A 216 AA2 5 TRP A 88 ? THR A 96 ? TRP A 88 THR A 96 AA2 6 VAL A 179 ? HIS A 180 ? VAL A 179 HIS A 180 AA3 1 SER A 71 ? ASP A 78 ? SER A 71 ASP A 78 AA3 2 ARG A 60 ? TYR A 67 ? ARG A 60 TYR A 67 AA3 3 VAL A 47 ? ASN A 55 ? VAL A 47 ASN A 55 AA3 4 VAL A 188 ? LEU A 198 ? VAL A 188 LEU A 198 AA3 5 THR A 105 ? LYS A 116 ? THR A 105 LYS A 116 AA3 6 ASN A 124 ? PHE A 130 ? ASN A 124 PHE A 130 AA4 1 SER A 71 ? ASP A 78 ? SER A 71 ASP A 78 AA4 2 ARG A 60 ? TYR A 67 ? ARG A 60 TYR A 67 AA4 3 VAL A 47 ? ASN A 55 ? VAL A 47 ASN A 55 AA4 4 VAL A 188 ? LEU A 198 ? VAL A 188 LEU A 198 AA4 5 THR A 105 ? LYS A 116 ? THR A 105 LYS A 116 AA4 6 LEU A 154 ? GLN A 155 ? LEU A 154 GLN A 155 AA4 7 THR A 147 ? THR A 148 ? THR A 147 THR A 148 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O SER A 36 ? O SER A 36 N ILE A 27 ? N ILE A 27 AA1 2 3 O ASP A 28 ? O ASP A 28 N ALA A 6 ? N ALA A 6 AA1 3 4 N LEU A 9 ? N LEU A 9 O ILE A 210 ? O ILE A 210 AA1 4 5 O PHE A 213 ? O PHE A 213 N GLY A 92 ? N GLY A 92 AA1 5 6 N VAL A 91 ? N VAL A 91 O PHE A 175 ? O PHE A 175 AA1 6 7 O ARG A 172 ? O ARG A 172 N GLN A 143 ? N GLN A 143 AA2 1 2 O SER A 36 ? O SER A 36 N ILE A 27 ? N ILE A 27 AA2 2 3 O ASP A 28 ? O ASP A 28 N ALA A 6 ? N ALA A 6 AA2 3 4 N LEU A 9 ? N LEU A 9 O ILE A 210 ? O ILE A 210 AA2 4 5 O PHE A 213 ? O PHE A 213 N GLY A 92 ? N GLY A 92 AA2 5 6 N VAL A 89 ? N VAL A 89 O VAL A 179 ? O VAL A 179 AA3 1 2 O TYR A 77 ? O TYR A 77 N LEU A 61 ? N LEU A 61 AA3 2 3 O SER A 66 ? O SER A 66 N THR A 49 ? N THR A 49 AA3 3 4 N ILE A 52 ? N ILE A 52 O ALA A 193 ? O ALA A 193 AA3 4 5 O VAL A 188 ? O VAL A 188 N LYS A 116 ? N LYS A 116 AA3 5 6 N LEU A 115 ? N LEU A 115 O ASN A 124 ? O ASN A 124 AA4 1 2 O TYR A 77 ? O TYR A 77 N LEU A 61 ? N LEU A 61 AA4 2 3 O SER A 66 ? O SER A 66 N THR A 49 ? N THR A 49 AA4 3 4 N ILE A 52 ? N ILE A 52 O ALA A 193 ? O ALA A 193 AA4 4 5 O VAL A 188 ? O VAL A 188 N LYS A 116 ? N LYS A 116 AA4 5 6 N ILE A 106 ? N ILE A 106 O LEU A 154 ? O LEU A 154 AA4 6 7 O GLN A 155 ? O GLN A 155 N THR A 147 ? N THR A 147 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 301 ? 6 'binding site for residue CA A 301' AC2 Software A MN 302 ? 6 'binding site for residue MN A 302' AC3 Software A XMM 303 ? 19 'binding site for residue XMM A 303' AC4 Software A GOL 304 ? 2 'binding site for residue GOL A 304' AC5 Software A GOL 305 ? 5 'binding site for residue GOL A 305' AC6 Software A GOL 306 ? 4 'binding site for residue GOL A 306' AC7 Software A GOL 307 ? 4 'binding site for residue GOL A 307' AC8 Software A GOL 308 ? 1 'binding site for residue GOL A 308' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 10 ? ASP A 10 . ? 1_555 ? 2 AC1 6 TYR A 12 ? TYR A 12 . ? 1_555 ? 3 AC1 6 ASN A 14 ? ASN A 14 . ? 1_555 ? 4 AC1 6 ASP A 19 ? ASP A 19 . ? 1_555 ? 5 AC1 6 HOH J . ? HOH A 434 . ? 1_555 ? 6 AC1 6 HOH J . ? HOH A 477 . ? 1_555 ? 7 AC2 6 GLU A 8 ? GLU A 8 . ? 1_555 ? 8 AC2 6 ASP A 10 ? ASP A 10 . ? 1_555 ? 9 AC2 6 ASP A 19 ? ASP A 19 . ? 1_555 ? 10 AC2 6 HIS A 24 ? HIS A 24 . ? 1_555 ? 11 AC2 6 HOH J . ? HOH A 418 . ? 1_555 ? 12 AC2 6 HOH J . ? HOH A 429 . ? 1_555 ? 13 AC3 19 TYR A 12 ? TYR A 12 . ? 1_555 ? 14 AC3 19 ASN A 14 ? ASN A 14 . ? 1_555 ? 15 AC3 19 SER A 66 ? SER A 66 . ? 8_455 ? 16 AC3 19 TYR A 67 ? TYR A 67 . ? 8_455 ? 17 AC3 19 GLY A 69 ? GLY A 69 . ? 8_455 ? 18 AC3 19 THR A 70 ? THR A 70 . ? 8_455 ? 19 AC3 19 SER A 71 ? SER A 71 . ? 8_455 ? 20 AC3 19 GLY A 98 ? GLY A 98 . ? 1_555 ? 21 AC3 19 LEU A 99 ? LEU A 99 . ? 1_555 ? 22 AC3 19 TYR A 100 ? TYR A 100 . ? 1_555 ? 23 AC3 19 LYS A 184 ? LYS A 184 . ? 6_555 ? 24 AC3 19 SER A 185 ? SER A 185 . ? 6_555 ? 25 AC3 19 ALA A 186 ? ALA A 186 . ? 6_555 ? 26 AC3 19 ALA A 207 ? ALA A 207 . ? 1_555 ? 27 AC3 19 ASP A 208 ? ASP A 208 . ? 1_555 ? 28 AC3 19 GLY A 227 ? GLY A 227 . ? 1_555 ? 29 AC3 19 ARG A 228 ? ARG A 228 . ? 1_555 ? 30 AC3 19 HOH J . ? HOH A 441 . ? 8_455 ? 31 AC3 19 HOH J . ? HOH A 480 . ? 1_555 ? 32 AC4 2 ILE A 120 ? ILE A 120 . ? 1_555 ? 33 AC4 2 HOH J . ? HOH A 405 . ? 1_555 ? 34 AC5 5 THR A 103 ? THR A 103 . ? 1_555 ? 35 AC5 5 THR A 105 ? THR A 105 . ? 1_555 ? 36 AC5 5 GLN A 155 ? GLN A 155 . ? 1_555 ? 37 AC5 5 GLY A 163 ? GLY A 163 . ? 1_555 ? 38 AC5 5 LYS A 200 ? LYS A 200 . ? 1_555 ? 39 AC6 4 LYS A 35 ? LYS A 35 . ? 1_555 ? 40 AC6 4 SER A 36 ? SER A 36 . ? 1_555 ? 41 AC6 4 THR A 37 ? THR A 37 . ? 1_555 ? 42 AC6 4 HOH J . ? HOH A 402 . ? 1_555 ? 43 AC7 4 THR A 44 ? THR A 44 . ? 1_555 ? 44 AC7 4 LYS A 200 ? LYS A 200 . ? 1_555 ? 45 AC7 4 SER A 201 ? SER A 201 . ? 1_555 ? 46 AC7 4 HOH J . ? HOH A 404 . ? 1_555 ? 47 AC8 1 HOH J . ? HOH A 483 . ? 1_555 ? # _atom_sites.entry_id 5U37 _atom_sites.fract_transf_matrix[1][1] 0.015601 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011504 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010774 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol BR C CA CL MN N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 ASP 2 2 2 ASP ASP A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 TYR 12 12 12 TYR TYR A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 ASN 14 14 14 ASN ASN A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 TYR 22 22 22 TYR TYR A . n A 1 23 PRO 23 23 23 PRO PRO A . n A 1 24 HIS 24 24 24 HIS HIS A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 TRP 40 40 40 TRP TRP A . n A 1 41 ASN 41 41 41 ASN ASN A . n A 1 42 MET 42 42 42 MET MET A . n A 1 43 GLN 43 43 43 GLN GLN A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 HIS 51 51 51 HIS HIS A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 TYR 67 67 67 TYR TYR A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 TYR 77 77 77 TYR TYR A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 ASN 82 82 82 ASN ASN A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 PRO 86 86 86 PRO PRO A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 TRP 88 88 88 TRP TRP A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 ARG 90 90 90 ARG ARG A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 TYR 100 100 100 TYR TYR A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 THR 103 103 103 THR THR A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 SER 108 108 108 SER SER A . n A 1 109 TRP 109 109 109 TRP TRP A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 PHE 111 111 111 PHE PHE A . n A 1 112 THR 112 112 112 THR THR A . n A 1 113 SER 113 113 113 SER SER A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 THR 117 117 117 THR THR A . n A 1 118 ASN 118 118 118 ASN ASN A . n A 1 119 SER 119 119 119 SER SER A . n A 1 120 ILE 120 120 120 ILE ILE A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 ASP 122 122 122 ASP ASP A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 SER 125 125 125 SER SER A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 HIS 127 127 127 HIS HIS A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 SER 129 129 129 SER SER A . n A 1 130 PHE 130 130 130 PHE PHE A . n A 1 131 SER 131 131 131 SER SER A . n A 1 132 ASN 132 132 132 ASN ASN A . n A 1 133 PHE 133 133 133 PHE PHE A . n A 1 134 SER 134 134 134 SER SER A . n A 1 135 GLN 135 135 135 GLN GLN A . n A 1 136 ASN 136 136 136 ASN ASN A . n A 1 137 PRO 137 137 137 PRO PRO A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 ASP 139 139 139 ASP ASP A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 ILE 141 141 141 ILE ILE A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 GLN 143 143 143 GLN GLN A . n A 1 144 GLY 144 144 144 GLY GLY A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 ALA 146 146 146 ALA ALA A . n A 1 147 THR 147 147 147 THR THR A . n A 1 148 THR 148 148 148 THR THR A . n A 1 149 ASP 149 149 149 ASP ASP A . n A 1 150 SER 150 150 150 SER SER A . n A 1 151 ASP 151 151 151 ASP ASP A . n A 1 152 GLY 152 152 152 GLY GLY A . n A 1 153 ASN 153 153 153 ASN ASN A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 GLN 155 155 155 GLN GLN A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 ARG 158 158 158 ARG ARG A . n A 1 159 VAL 159 159 159 VAL VAL A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 SER 161 161 161 SER SER A . n A 1 162 ASP 162 162 162 ASP ASP A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 SER 164 164 164 SER SER A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 GLN 166 166 166 GLN GLN A . n A 1 167 GLY 167 167 167 GLY GLY A . n A 1 168 SER 168 168 168 SER SER A . n A 1 169 SER 169 169 169 SER SER A . n A 1 170 VAL 170 170 170 VAL VAL A . n A 1 171 GLY 171 171 171 GLY GLY A . n A 1 172 ARG 172 172 172 ARG ARG A . n A 1 173 ALA 173 173 173 ALA ALA A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 PHE 175 175 175 PHE PHE A . n A 1 176 TYR 176 176 176 TYR TYR A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 PRO 178 178 178 PRO PRO A . n A 1 179 VAL 179 179 179 VAL VAL A . n A 1 180 HIS 180 180 180 HIS HIS A . n A 1 181 ILE 181 181 181 ILE ILE A . n A 1 182 TRP 182 182 182 TRP TRP A . n A 1 183 GLU 183 183 183 GLU GLU A . n A 1 184 LYS 184 184 184 LYS LYS A . n A 1 185 SER 185 185 185 SER SER A . n A 1 186 ALA 186 186 186 ALA ALA A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 VAL 188 188 188 VAL VAL A . n A 1 189 ALA 189 189 189 ALA ALA A . n A 1 190 SER 190 190 190 SER SER A . n A 1 191 PHE 191 191 191 PHE PHE A . n A 1 192 ASP 192 192 192 ASP ASP A . n A 1 193 ALA 193 193 193 ALA ALA A . n A 1 194 THR 194 194 194 THR THR A . n A 1 195 PHE 195 195 195 PHE PHE A . n A 1 196 THR 196 196 196 THR THR A . n A 1 197 PHE 197 197 197 PHE PHE A . n A 1 198 LEU 198 198 198 LEU LEU A . n A 1 199 ILE 199 199 199 ILE ILE A . n A 1 200 LYS 200 200 200 LYS LYS A . n A 1 201 SER 201 201 201 SER SER A . n A 1 202 PRO 202 202 202 PRO PRO A . n A 1 203 ASP 203 203 203 ASP ASP A . n A 1 204 ARG 204 204 204 ARG ARG A . n A 1 205 ASP 205 205 205 ASP ASP A . n A 1 206 PRO 206 206 206 PRO PRO A . n A 1 207 ALA 207 207 207 ALA ALA A . n A 1 208 ASP 208 208 208 ASP ASP A . n A 1 209 GLY 209 209 209 GLY GLY A . n A 1 210 ILE 210 210 210 ILE ILE A . n A 1 211 THR 211 211 211 THR THR A . n A 1 212 PHE 212 212 212 PHE PHE A . n A 1 213 PHE 213 213 213 PHE PHE A . n A 1 214 ILE 214 214 214 ILE ILE A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 ASN 216 216 216 ASN ASN A . n A 1 217 THR 217 217 217 THR THR A . n A 1 218 ASP 218 218 218 ASP ASP A . n A 1 219 THR 219 219 219 THR THR A . n A 1 220 SER 220 220 220 SER SER A . n A 1 221 ILE 221 221 221 ILE ILE A . n A 1 222 PRO 222 222 222 PRO PRO A . n A 1 223 SER 223 223 223 SER SER A . n A 1 224 GLY 224 224 224 GLY GLY A . n A 1 225 SER 225 225 225 SER SER A . n A 1 226 GLY 226 226 226 GLY GLY A . n A 1 227 GLY 227 227 227 GLY GLY A . n A 1 228 ARG 228 228 228 ARG ARG A . n A 1 229 LEU 229 229 229 LEU LEU A . n A 1 230 LEU 230 230 230 LEU LEU A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 LEU 232 232 232 LEU LEU A . n A 1 233 PHE 233 233 233 PHE PHE A . n A 1 234 PRO 234 234 234 PRO PRO A . n A 1 235 ASP 235 235 235 ASP ASP A . n A 1 236 ALA 236 236 236 ALA ALA A . n A 1 237 ASN 237 237 237 ASN ASN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 301 238 CA CA A . C 3 MN 1 302 239 MN MN A . D 4 XMM 1 303 240 XMM XMM A . E 5 GOL 1 304 241 GOL GOL A . F 5 GOL 1 305 242 GOL GOL A . G 5 GOL 1 306 243 GOL GOL A . H 5 GOL 1 307 244 GOL GOL A . I 5 GOL 1 308 245 GOL GOL A . J 6 HOH 1 401 16 HOH HOH A . J 6 HOH 2 402 130 HOH HOH A . J 6 HOH 3 403 127 HOH HOH A . J 6 HOH 4 404 43 HOH HOH A . J 6 HOH 5 405 126 HOH HOH A . J 6 HOH 6 406 19 HOH HOH A . J 6 HOH 7 407 28 HOH HOH A . J 6 HOH 8 408 5 HOH HOH A . J 6 HOH 9 409 135 HOH HOH A . J 6 HOH 10 410 134 HOH HOH A . J 6 HOH 11 411 100 HOH HOH A . J 6 HOH 12 412 106 HOH HOH A . J 6 HOH 13 413 40 HOH HOH A . J 6 HOH 14 414 83 HOH HOH A . J 6 HOH 15 415 66 HOH HOH A . J 6 HOH 16 416 38 HOH HOH A . J 6 HOH 17 417 20 HOH HOH A . J 6 HOH 18 418 3 HOH HOH A . J 6 HOH 19 419 99 HOH HOH A . J 6 HOH 20 420 26 HOH HOH A . J 6 HOH 21 421 24 HOH HOH A . J 6 HOH 22 422 108 HOH HOH A . J 6 HOH 23 423 21 HOH HOH A . J 6 HOH 24 424 102 HOH HOH A . J 6 HOH 25 425 84 HOH HOH A . J 6 HOH 26 426 58 HOH HOH A . J 6 HOH 27 427 22 HOH HOH A . J 6 HOH 28 428 55 HOH HOH A . J 6 HOH 29 429 15 HOH HOH A . J 6 HOH 30 430 85 HOH HOH A . J 6 HOH 31 431 31 HOH HOH A . J 6 HOH 32 432 94 HOH HOH A . J 6 HOH 33 433 49 HOH HOH A . J 6 HOH 34 434 4 HOH HOH A . J 6 HOH 35 435 90 HOH HOH A . J 6 HOH 36 436 103 HOH HOH A . J 6 HOH 37 437 42 HOH HOH A . J 6 HOH 38 438 10 HOH HOH A . J 6 HOH 39 439 12 HOH HOH A . J 6 HOH 40 440 7 HOH HOH A . J 6 HOH 41 441 50 HOH HOH A . J 6 HOH 42 442 53 HOH HOH A . J 6 HOH 43 443 79 HOH HOH A . J 6 HOH 44 444 118 HOH HOH A . J 6 HOH 45 445 14 HOH HOH A . J 6 HOH 46 446 142 HOH HOH A . J 6 HOH 47 447 80 HOH HOH A . J 6 HOH 48 448 17 HOH HOH A . J 6 HOH 49 449 119 HOH HOH A . J 6 HOH 50 450 18 HOH HOH A . J 6 HOH 51 451 33 HOH HOH A . J 6 HOH 52 452 30 HOH HOH A . J 6 HOH 53 453 87 HOH HOH A . J 6 HOH 54 454 128 HOH HOH A . J 6 HOH 55 455 77 HOH HOH A . J 6 HOH 56 456 23 HOH HOH A . J 6 HOH 57 457 86 HOH HOH A . J 6 HOH 58 458 9 HOH HOH A . J 6 HOH 59 459 29 HOH HOH A . J 6 HOH 60 460 104 HOH HOH A . J 6 HOH 61 461 139 HOH HOH A . J 6 HOH 62 462 37 HOH HOH A . J 6 HOH 63 463 116 HOH HOH A . J 6 HOH 64 464 60 HOH HOH A . J 6 HOH 65 465 45 HOH HOH A . J 6 HOH 66 466 6 HOH HOH A . J 6 HOH 67 467 34 HOH HOH A . J 6 HOH 68 468 62 HOH HOH A . J 6 HOH 69 469 125 HOH HOH A . J 6 HOH 70 470 115 HOH HOH A . J 6 HOH 71 471 91 HOH HOH A . J 6 HOH 72 472 13 HOH HOH A . J 6 HOH 73 473 2 HOH HOH A . J 6 HOH 74 474 39 HOH HOH A . J 6 HOH 75 475 110 HOH HOH A . J 6 HOH 76 476 25 HOH HOH A . J 6 HOH 77 477 1 HOH HOH A . J 6 HOH 78 478 82 HOH HOH A . J 6 HOH 79 479 98 HOH HOH A . J 6 HOH 80 480 56 HOH HOH A . J 6 HOH 81 481 54 HOH HOH A . J 6 HOH 82 482 71 HOH HOH A . J 6 HOH 83 483 122 HOH HOH A . J 6 HOH 84 484 97 HOH HOH A . J 6 HOH 85 485 140 HOH HOH A . J 6 HOH 86 486 27 HOH HOH A . J 6 HOH 87 487 111 HOH HOH A . J 6 HOH 88 488 73 HOH HOH A . J 6 HOH 89 489 46 HOH HOH A . J 6 HOH 90 490 132 HOH HOH A . J 6 HOH 91 491 136 HOH HOH A . J 6 HOH 92 492 141 HOH HOH A . J 6 HOH 93 493 143 HOH HOH A . J 6 HOH 94 494 65 HOH HOH A . J 6 HOH 95 495 68 HOH HOH A . J 6 HOH 96 496 76 HOH HOH A . J 6 HOH 97 497 63 HOH HOH A . J 6 HOH 98 498 61 HOH HOH A . J 6 HOH 99 499 32 HOH HOH A . J 6 HOH 100 500 120 HOH HOH A . J 6 HOH 101 501 117 HOH HOH A . J 6 HOH 102 502 35 HOH HOH A . J 6 HOH 103 503 67 HOH HOH A . J 6 HOH 104 504 124 HOH HOH A . J 6 HOH 105 505 64 HOH HOH A . J 6 HOH 106 506 131 HOH HOH A . J 6 HOH 107 507 41 HOH HOH A . J 6 HOH 108 508 44 HOH HOH A . J 6 HOH 109 509 11 HOH HOH A . J 6 HOH 110 510 112 HOH HOH A . J 6 HOH 111 511 74 HOH HOH A . J 6 HOH 112 512 36 HOH HOH A . J 6 HOH 113 513 52 HOH HOH A . J 6 HOH 114 514 92 HOH HOH A . J 6 HOH 115 515 101 HOH HOH A . J 6 HOH 116 516 138 HOH HOH A . J 6 HOH 117 517 93 HOH HOH A . J 6 HOH 118 518 72 HOH HOH A . J 6 HOH 119 519 81 HOH HOH A . J 6 HOH 120 520 8 HOH HOH A . J 6 HOH 121 521 57 HOH HOH A . J 6 HOH 122 522 114 HOH HOH A . J 6 HOH 123 523 137 HOH HOH A . J 6 HOH 124 524 89 HOH HOH A . J 6 HOH 125 525 47 HOH HOH A . J 6 HOH 126 526 59 HOH HOH A . J 6 HOH 127 527 88 HOH HOH A . J 6 HOH 128 528 133 HOH HOH A . J 6 HOH 129 529 78 HOH HOH A . J 6 HOH 130 530 123 HOH HOH A . J 6 HOH 131 531 107 HOH HOH A . J 6 HOH 132 532 105 HOH HOH A . J 6 HOH 133 533 75 HOH HOH A . J 6 HOH 134 534 69 HOH HOH A . J 6 HOH 135 535 121 HOH HOH A . J 6 HOH 136 536 113 HOH HOH A . J 6 HOH 137 537 70 HOH HOH A . J 6 HOH 138 538 96 HOH HOH A . J 6 HOH 139 539 51 HOH HOH A . J 6 HOH 140 540 95 HOH HOH A . J 6 HOH 141 541 129 HOH HOH A . J 6 HOH 142 542 48 HOH HOH A . J 6 HOH 143 543 109 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 13790 ? 1 MORE -145 ? 1 'SSA (A^2)' 33210 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 64.1000000000 0.0000000000 -1.0000000000 0.0000000000 86.9300000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_655 -x+1,y,-z -1.0000000000 0.0000000000 0.0000000000 64.1000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_565 x,-y+1,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 86.9300000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 525 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id J _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 8 ? A GLU 8 ? 1_555 MN ? C MN . ? A MN 302 ? 1_555 OD2 ? A ASP 10 ? A ASP 10 ? 1_555 97.6 ? 2 OE2 ? A GLU 8 ? A GLU 8 ? 1_555 MN ? C MN . ? A MN 302 ? 1_555 OD1 ? A ASP 19 ? A ASP 19 ? 1_555 166.3 ? 3 OD2 ? A ASP 10 ? A ASP 10 ? 1_555 MN ? C MN . ? A MN 302 ? 1_555 OD1 ? A ASP 19 ? A ASP 19 ? 1_555 95.2 ? 4 OE2 ? A GLU 8 ? A GLU 8 ? 1_555 MN ? C MN . ? A MN 302 ? 1_555 NE2 ? A HIS 24 ? A HIS 24 ? 1_555 92.5 ? 5 OD2 ? A ASP 10 ? A ASP 10 ? 1_555 MN ? C MN . ? A MN 302 ? 1_555 NE2 ? A HIS 24 ? A HIS 24 ? 1_555 90.3 ? 6 OD1 ? A ASP 19 ? A ASP 19 ? 1_555 MN ? C MN . ? A MN 302 ? 1_555 NE2 ? A HIS 24 ? A HIS 24 ? 1_555 92.1 ? 7 OE2 ? A GLU 8 ? A GLU 8 ? 1_555 MN ? C MN . ? A MN 302 ? 1_555 O ? J HOH . ? A HOH 429 ? 1_555 83.7 ? 8 OD2 ? A ASP 10 ? A ASP 10 ? 1_555 MN ? C MN . ? A MN 302 ? 1_555 O ? J HOH . ? A HOH 429 ? 1_555 177.7 ? 9 OD1 ? A ASP 19 ? A ASP 19 ? 1_555 MN ? C MN . ? A MN 302 ? 1_555 O ? J HOH . ? A HOH 429 ? 1_555 83.6 ? 10 NE2 ? A HIS 24 ? A HIS 24 ? 1_555 MN ? C MN . ? A MN 302 ? 1_555 O ? J HOH . ? A HOH 429 ? 1_555 87.7 ? 11 OE2 ? A GLU 8 ? A GLU 8 ? 1_555 MN ? C MN . ? A MN 302 ? 1_555 O ? J HOH . ? A HOH 418 ? 1_555 85.9 ? 12 OD2 ? A ASP 10 ? A ASP 10 ? 1_555 MN ? C MN . ? A MN 302 ? 1_555 O ? J HOH . ? A HOH 418 ? 1_555 91.1 ? 13 OD1 ? A ASP 19 ? A ASP 19 ? 1_555 MN ? C MN . ? A MN 302 ? 1_555 O ? J HOH . ? A HOH 418 ? 1_555 89.1 ? 14 NE2 ? A HIS 24 ? A HIS 24 ? 1_555 MN ? C MN . ? A MN 302 ? 1_555 O ? J HOH . ? A HOH 418 ? 1_555 178.0 ? 15 O ? J HOH . ? A HOH 429 ? 1_555 MN ? C MN . ? A MN 302 ? 1_555 O ? J HOH . ? A HOH 418 ? 1_555 90.8 ? 16 OD1 ? A ASP 10 ? A ASP 10 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OD2 ? A ASP 10 ? A ASP 10 ? 1_555 53.0 ? 17 OD1 ? A ASP 10 ? A ASP 10 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? A TYR 12 ? A TYR 12 ? 1_555 79.5 ? 18 OD2 ? A ASP 10 ? A ASP 10 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? A TYR 12 ? A TYR 12 ? 1_555 113.7 ? 19 OD1 ? A ASP 10 ? A ASP 10 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OD1 ? A ASN 14 ? A ASN 14 ? 1_555 147.3 ? 20 OD2 ? A ASP 10 ? A ASP 10 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OD1 ? A ASN 14 ? A ASN 14 ? 1_555 159.7 ? 21 O ? A TYR 12 ? A TYR 12 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OD1 ? A ASN 14 ? A ASN 14 ? 1_555 79.0 ? 22 OD1 ? A ASP 10 ? A ASP 10 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OD2 ? A ASP 19 ? A ASP 19 ? 1_555 115.4 ? 23 OD2 ? A ASP 10 ? A ASP 10 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OD2 ? A ASP 19 ? A ASP 19 ? 1_555 79.1 ? 24 O ? A TYR 12 ? A TYR 12 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OD2 ? A ASP 19 ? A ASP 19 ? 1_555 84.6 ? 25 OD1 ? A ASN 14 ? A ASN 14 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OD2 ? A ASP 19 ? A ASP 19 ? 1_555 86.8 ? 26 OD1 ? A ASP 10 ? A ASP 10 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? J HOH . ? A HOH 477 ? 1_555 110.7 ? 27 OD2 ? A ASP 10 ? A ASP 10 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? J HOH . ? A HOH 477 ? 1_555 73.0 ? 28 O ? A TYR 12 ? A TYR 12 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? J HOH . ? A HOH 477 ? 1_555 169.6 ? 29 OD1 ? A ASN 14 ? A ASN 14 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? J HOH . ? A HOH 477 ? 1_555 92.4 ? 30 OD2 ? A ASP 19 ? A ASP 19 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? J HOH . ? A HOH 477 ? 1_555 89.2 ? 31 OD1 ? A ASP 10 ? A ASP 10 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? J HOH . ? A HOH 434 ? 1_555 71.0 ? 32 OD2 ? A ASP 10 ? A ASP 10 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? J HOH . ? A HOH 434 ? 1_555 109.3 ? 33 O ? A TYR 12 ? A TYR 12 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? J HOH . ? A HOH 434 ? 1_555 91.6 ? 34 OD1 ? A ASN 14 ? A ASN 14 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? J HOH . ? A HOH 434 ? 1_555 85.2 ? 35 OD2 ? A ASP 19 ? A ASP 19 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? J HOH . ? A HOH 434 ? 1_555 171.6 ? 36 O ? J HOH . ? A HOH 477 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? J HOH . ? A HOH 434 ? 1_555 93.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-01-10 2 'Structure model' 1 1 2018-03-07 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_database_PDB_obs_spr 2 2 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_database_status.status_code' 2 2 'Structure model' '_pdbx_database_status.status_code_sf' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? 3.3.22 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.10.1_2155 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 471 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 506 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 14 ? ? -103.11 79.37 2 1 THR A 117 ? ? -135.12 -133.84 3 1 ASN A 118 ? ? -101.27 74.32 4 1 SER A 119 ? ? 179.26 166.43 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 'MANGANESE (II) ION' MN 4 '(2R,3S,4S,5S,6R)-2-(5-BROMO-4-CHLORO-1H-INDOL-3-YLOXY)-TETRAHYDRO-6-(HYDROXYMETHYL)-2H-PYRAN-3,4,5-TRIOL' XMM 5 GLYCEROL GOL 6 water HOH #