data_5U3G # _entry.id 5U3G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5U3G pdb_00005u3g 10.2210/pdb5u3g/pdb WWPDB D_1000225273 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-02-01 2 'Structure model' 1 1 2017-02-15 3 'Structure model' 1 2 2017-03-29 4 'Structure model' 1 3 2017-09-27 5 'Structure model' 1 4 2019-12-04 6 'Structure model' 1 5 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 5 'Structure model' 'Author supporting evidence' 5 6 'Structure model' 'Data collection' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_audit_support 2 5 'Structure model' pdbx_audit_support 3 6 'Structure model' chem_comp_atom 4 6 'Structure model' chem_comp_bond 5 6 'Structure model' database_2 6 6 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_audit_support.funding_organization' 2 5 'Structure model' '_pdbx_audit_support.funding_organization' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' 5 6 'Structure model' '_struct_conn.pdbx_dist_value' 6 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 7 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 8 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 9 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 10 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 11 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 12 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 13 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 14 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 15 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 16 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 17 6 'Structure model' '_struct_conn.ptnr2_symmetry' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5U3G _pdbx_database_status.recvd_initial_deposition_date 2016-12-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Battaglia, R.A.' 1 ? 'Price, I.R.' 2 ? 'Ke, A.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev RNA _citation.journal_id_ASTM RNARFU _citation.journal_id_CSD 2122 _citation.journal_id_ISSN 1469-9001 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 23 _citation.language ? _citation.page_first 578 _citation.page_last 585 _citation.title 'Structural basis for guanidine sensing by the ykkC family of riboswitches.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1261/rna.060186.116 _citation.pdbx_database_id_PubMed 28096518 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Battaglia, R.A.' 1 ? primary 'Price, I.R.' 2 ? primary 'Ke, A.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'ykkC riboswitch' 27913.623 1 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 24 ? ? ? ? 3 non-polymer syn GUANIDINE 59.070 1 ? ? ? ? 4 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 5 water nat water 18.015 21 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(GTP)GUGACUAGGGUUCCGGCGAAAGCCGGUCCGAGAGUUACCGACCGCCGAAAGGCGGUUACACGGCGGGAAAAAAGC CCGGGAGGA ; _entity_poly.pdbx_seq_one_letter_code_can ;GGUGACUAGGGUUCCGGCGAAAGCCGGUCCGAGAGUUACCGACCGCCGAAAGGCGGUUACACGGCGGGAAAAAAGCCCGG GAGGA ; _entity_poly.pdbx_strand_id B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 GUANIDINE GAI 4 'POTASSIUM ION' K 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GTP n 1 2 G n 1 3 U n 1 4 G n 1 5 A n 1 6 C n 1 7 U n 1 8 A n 1 9 G n 1 10 G n 1 11 G n 1 12 U n 1 13 U n 1 14 C n 1 15 C n 1 16 G n 1 17 G n 1 18 C n 1 19 G n 1 20 A n 1 21 A n 1 22 A n 1 23 G n 1 24 C n 1 25 C n 1 26 G n 1 27 G n 1 28 U n 1 29 C n 1 30 C n 1 31 G n 1 32 A n 1 33 G n 1 34 A n 1 35 G n 1 36 U n 1 37 U n 1 38 A n 1 39 C n 1 40 C n 1 41 G n 1 42 A n 1 43 C n 1 44 C n 1 45 G n 1 46 C n 1 47 C n 1 48 G n 1 49 A n 1 50 A n 1 51 A n 1 52 G n 1 53 G n 1 54 C n 1 55 G n 1 56 G n 1 57 U n 1 58 U n 1 59 A n 1 60 C n 1 61 A n 1 62 C n 1 63 G n 1 64 G n 1 65 C n 1 66 G n 1 67 G n 1 68 G n 1 69 A n 1 70 A n 1 71 A n 1 72 A n 1 73 A n 1 74 A n 1 75 G n 1 76 C n 1 77 C n 1 78 C n 1 79 G n 1 80 G n 1 81 G n 1 82 A n 1 83 G n 1 84 G n 1 85 A n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 85 _pdbx_entity_src_syn.organism_scientific 'Dickeya dadantii' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 204038 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GAI non-polymer . GUANIDINE ? 'C H5 N3' 59.070 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GTP 1 1 1 GTP GTP B . n A 1 2 G 2 2 2 G G B . n A 1 3 U 3 3 3 U U B . n A 1 4 G 4 4 4 G G B . n A 1 5 A 5 5 5 A A B . n A 1 6 C 6 6 6 C C B . n A 1 7 U 7 7 7 U U B . n A 1 8 A 8 8 8 A A B . n A 1 9 G 9 9 9 G G B . n A 1 10 G 10 10 10 G G B . n A 1 11 G 11 11 11 G G B . n A 1 12 U 12 12 12 U U B . n A 1 13 U 13 13 13 U U B . n A 1 14 C 14 14 14 C C B . n A 1 15 C 15 15 15 C C B . n A 1 16 G 16 16 16 G G B . n A 1 17 G 17 17 17 G G B . n A 1 18 C 18 18 18 C C B . n A 1 19 G 19 19 19 G G B . n A 1 20 A 20 20 20 A A B . n A 1 21 A 21 21 21 A A B . n A 1 22 A 22 22 22 A A B . n A 1 23 G 23 23 23 G G B . n A 1 24 C 24 24 24 C C B . n A 1 25 C 25 25 25 C C B . n A 1 26 G 26 26 26 G G B . n A 1 27 G 27 27 27 G G B . n A 1 28 U 28 28 28 U U B . n A 1 29 C 29 29 29 C C B . n A 1 30 C 30 30 30 C C B . n A 1 31 G 31 31 31 G G B . n A 1 32 A 32 32 32 A A B . n A 1 33 G 33 33 33 G G B . n A 1 34 A 34 34 34 A A B . n A 1 35 G 35 35 35 G G B . n A 1 36 U 36 36 36 U U B . n A 1 37 U 37 37 37 U U B . n A 1 38 A 38 38 38 A A B . n A 1 39 C 39 39 39 C C B . n A 1 40 C 40 40 40 C C B . n A 1 41 G 41 41 41 G G B . n A 1 42 A 42 42 42 A A B . n A 1 43 C 43 43 43 C C B . n A 1 44 C 44 44 44 C C B . n A 1 45 G 45 45 45 G G B . n A 1 46 C 46 46 46 C C B . n A 1 47 C 47 47 47 C C B . n A 1 48 G 48 48 48 G G B . n A 1 49 A 49 49 49 A A B . n A 1 50 A 50 50 50 A A B . n A 1 51 A 51 51 51 A A B . n A 1 52 G 52 52 52 G G B . n A 1 53 G 53 53 53 G G B . n A 1 54 C 54 54 54 C C B . n A 1 55 G 55 55 55 G G B . n A 1 56 G 56 56 56 G G B . n A 1 57 U 57 57 57 U U B . n A 1 58 U 58 58 58 U U B . n A 1 59 A 59 59 59 A A B . n A 1 60 C 60 60 60 C C B . n A 1 61 A 61 61 61 A A B . n A 1 62 C 62 62 62 C C B . n A 1 63 G 63 63 63 G G B . n A 1 64 G 64 64 64 G G B . n A 1 65 C 65 65 65 C C B . n A 1 66 G 66 66 66 G G B . n A 1 67 G 67 67 67 G G B . n A 1 68 G 68 68 68 G G B . n A 1 69 A 69 69 69 A A B . n A 1 70 A 70 70 70 A A B . n A 1 71 A 71 71 71 A A B . n A 1 72 A 72 72 72 A A B . n A 1 73 A 73 73 73 A A B . n A 1 74 A 74 74 74 A A B . n A 1 75 G 75 75 75 G G B . n A 1 76 C 76 76 76 C C B . n A 1 77 C 77 77 77 C C B . n A 1 78 C 78 78 78 C C B . n A 1 79 G 79 79 79 G G B . n A 1 80 G 80 80 80 G G B . n A 1 81 G 81 81 81 G G B . n A 1 82 A 82 82 82 A A B . n A 1 83 G 83 83 83 G G B . n A 1 84 G 84 84 84 G G B . n A 1 85 A 85 85 85 A A B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 101 1 MG MG B . C 2 MG 1 102 3 MG MG B . D 2 MG 1 103 7 MG MG B . E 2 MG 1 104 8 MG MG B . F 2 MG 1 105 9 MG MG B . G 2 MG 1 106 10 MG MG B . H 2 MG 1 107 12 MG MG B . I 2 MG 1 108 19 MG MG B . J 2 MG 1 109 20 MG MG B . K 2 MG 1 110 21 MG MG B . L 2 MG 1 111 22 MG MG B . M 2 MG 1 112 23 MG MG B . N 2 MG 1 113 24 MG MG B . O 2 MG 1 114 25 MG MG B . P 2 MG 1 115 26 MG MG B . Q 2 MG 1 116 27 MG MG B . R 2 MG 1 117 28 MG MG B . S 2 MG 1 118 29 MG MG B . T 2 MG 1 119 30 MG MG B . U 2 MG 1 120 32 MG MG B . V 2 MG 1 121 33 MG MG B . W 2 MG 1 122 34 MG MG B . X 2 MG 1 123 35 MG MG B . Y 2 MG 1 124 36 MG MG B . Z 3 GAI 1 125 1 GAI GAI B . AA 4 K 1 126 2 K K B . BA 5 HOH 1 201 16 HOH HOH B . BA 5 HOH 2 202 15 HOH HOH B . BA 5 HOH 3 203 10 HOH HOH B . BA 5 HOH 4 204 9 HOH HOH B . BA 5 HOH 5 205 14 HOH HOH B . BA 5 HOH 6 206 20 HOH HOH B . BA 5 HOH 7 207 7 HOH HOH B . BA 5 HOH 8 208 2 HOH HOH B . BA 5 HOH 9 209 5 HOH HOH B . BA 5 HOH 10 210 6 HOH HOH B . BA 5 HOH 11 211 13 HOH HOH B . BA 5 HOH 12 212 1 HOH HOH B . BA 5 HOH 13 213 3 HOH HOH B . BA 5 HOH 14 214 12 HOH HOH B . BA 5 HOH 15 215 19 HOH HOH B . BA 5 HOH 16 216 11 HOH HOH B . BA 5 HOH 17 217 8 HOH HOH B . BA 5 HOH 18 218 18 HOH HOH B . BA 5 HOH 19 219 4 HOH HOH B . BA 5 HOH 20 220 17 HOH HOH B . BA 5 HOH 21 221 21 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.10.1_2155: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? AutoSol ? ? ? . 5 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5U3G _cell.details ? _cell.formula_units_Z ? _cell.length_a 67.441 _cell.length_a_esd ? _cell.length_b 78.371 _cell.length_b_esd ? _cell.length_c 98.844 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5U3G _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5U3G _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.3 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47 _exptl_crystal.description plate _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;10 mM HEPES pH 7, 130 mM NaCl, 10 mM MgCl2, 1 mM guanidinium HCl, 20% (+/-)-2-methyl-2,4-pentanediol, 40 mM NaCacodylate pH 6, 12 mM spermine ; _exptl_crystal_grow.pdbx_pH_range 6.0-7.0 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-08-14 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9791 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9791 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5U3G _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.3 _reflns.d_resolution_low 55.709 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11977 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.6 _reflns.pdbx_Rmerge_I_obs 0.07749 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.33 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half .991 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high . _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5U3G _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.300 _refine.ls_d_res_low 55.709 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11946 _refine.ls_number_reflns_R_free 612 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.72 _refine.ls_percent_reflns_R_free 5.12 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1931 _refine.ls_R_factor_R_free 0.2129 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1921 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details 'phenix default' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.95 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.25 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1852 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 21 _refine_hist.number_atoms_total 1902 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 55.709 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 ? 2078 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.132 ? 3243 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 13.835 ? 1008 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.065 ? 424 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 86 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.3000 2.5315 . . 144 2792 100.00 . . . 0.2508 . 0.2709 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5315 2.8978 . . 157 2785 100.00 . . . 0.2989 . 0.2998 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8978 3.6508 . . 161 2805 99.00 . . . 0.2642 . 0.2016 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.6508 55.7255 . . 150 2952 100.00 . . . 0.1556 . 0.1541 . . . . . . . . . . # _struct.entry_id 5U3G _struct.title 'Structure of the Dickeya dadantii ykkC riboswitch bound to guanidinium' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5U3G _struct_keywords.text 'riboswitch, ykkC, guanidine, guanidinium, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 2 ? M N N 2 ? N N N 2 ? O N N 2 ? P N N 2 ? Q N N 2 ? R N N 2 ? S N N 2 ? T N N 2 ? U N N 2 ? V N N 2 ? W N N 2 ? X N N 2 ? Y N N 2 ? Z N N 3 ? AA N N 4 ? BA N N 5 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5U3G _struct_ref.pdbx_db_accession 5U3G _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5U3G _struct_ref_seq.pdbx_strand_id B _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 85 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5U3G _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 85 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 85 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GTP 1 "O3'" ? ? ? 1_555 A G 2 P ? ? B GTP 1 B G 2 1_555 ? ? ? ? ? ? ? 1.562 ? ? metalc1 metalc ? ? A G 11 O6 ? ? ? 1_555 Y MG . MG ? ? B G 11 B MG 124 1_555 ? ? ? ? ? ? ? 2.639 ? ? metalc2 metalc ? ? A U 12 O4 ? ? ? 1_555 Y MG . MG ? ? B U 12 B MG 124 1_555 ? ? ? ? ? ? ? 2.531 ? ? metalc3 metalc ? ? A C 30 OP2 ? ? ? 1_555 K MG . MG ? ? B C 30 B MG 110 1_555 ? ? ? ? ? ? ? 2.888 ? ? metalc4 metalc ? ? A G 31 O6 ? ? ? 1_555 L MG . MG ? ? B G 31 B MG 111 1_555 ? ? ? ? ? ? ? 2.318 ? ? metalc5 metalc ? ? A G 33 OP1 ? ? ? 1_555 B MG . MG ? ? B G 33 B MG 101 1_555 ? ? ? ? ? ? ? 1.871 ? ? metalc6 metalc ? ? A G 33 OP2 ? ? ? 1_555 M MG . MG ? ? B G 33 B MG 112 1_555 ? ? ? ? ? ? ? 2.626 ? ? metalc7 metalc ? ? A G 53 OP1 ? ? ? 1_555 O MG . MG ? ? B G 53 B MG 114 4_559 ? ? ? ? ? ? ? 2.697 ? ? metalc8 metalc ? ? A C 76 OP1 ? ? ? 1_555 B MG . MG ? ? B C 76 B MG 101 1_555 ? ? ? ? ? ? ? 2.163 ? ? metalc9 metalc ? ? A C 77 OP2 ? ? ? 1_555 B MG . MG ? ? B C 77 B MG 101 1_555 ? ? ? ? ? ? ? 2.042 ? ? metalc10 metalc ? ? A C 77 OP1 ? ? ? 1_555 F MG . MG ? ? B C 77 B MG 105 1_555 ? ? ? ? ? ? ? 2.191 ? ? metalc11 metalc ? ? A A 82 OP2 ? ? ? 1_555 S MG . MG ? ? B A 82 B MG 118 1_555 ? ? ? ? ? ? ? 2.916 ? ? metalc12 metalc ? ? A A 85 OP1 ? ? ? 1_555 U MG . MG ? ? B A 85 B MG 120 4_569 ? ? ? ? ? ? ? 2.432 ? ? metalc13 metalc ? ? B MG . MG ? ? ? 1_555 BA HOH . O ? ? B MG 101 B HOH 207 1_555 ? ? ? ? ? ? ? 1.894 ? ? metalc14 metalc ? ? B MG . MG ? ? ? 1_555 BA HOH . O ? ? B MG 101 B HOH 210 1_555 ? ? ? ? ? ? ? 1.918 ? ? metalc15 metalc ? ? B MG . MG ? ? ? 1_555 BA HOH . O ? ? B MG 101 B HOH 214 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc16 metalc ? ? F MG . MG ? ? ? 1_555 BA HOH . O ? ? B MG 105 B HOH 203 1_555 ? ? ? ? ? ? ? 1.957 ? ? metalc17 metalc ? ? L MG . MG ? ? ? 1_555 BA HOH . O ? ? B MG 111 B HOH 208 1_555 ? ? ? ? ? ? ? 2.825 ? ? metalc18 metalc ? ? L MG . MG ? ? ? 1_555 BA HOH . O ? ? B MG 111 B HOH 220 1_555 ? ? ? ? ? ? ? 1.858 ? ? metalc19 metalc ? ? M MG . MG ? ? ? 1_555 BA HOH . O ? ? B MG 112 B HOH 203 1_555 ? ? ? ? ? ? ? 2.665 ? ? metalc20 metalc ? ? N MG . MG ? ? ? 1_555 BA HOH . O ? ? B MG 113 B HOH 208 1_555 ? ? ? ? ? ? ? 1.845 ? ? metalc21 metalc ? ? P MG . MG ? ? ? 1_555 BA HOH . O ? ? B MG 115 B HOH 217 1_555 ? ? ? ? ? ? ? 1.945 ? ? metalc22 metalc ? ? R MG . MG ? ? ? 1_555 BA HOH . O ? ? B MG 117 B HOH 218 6_554 ? ? ? ? ? ? ? 2.691 ? ? metalc23 metalc ? ? V MG . MG ? ? ? 1_555 BA HOH . O ? ? B MG 121 B HOH 219 1_555 ? ? ? ? ? ? ? 2.856 ? ? metalc24 metalc ? ? W MG . MG ? ? ? 1_555 BA HOH . O ? ? B MG 122 B HOH 205 1_555 ? ? ? ? ? ? ? 1.956 ? ? metalc25 metalc ? ? W MG . MG ? ? ? 1_555 BA HOH . O ? ? B MG 122 B HOH 211 1_555 ? ? ? ? ? ? ? 2.111 ? ? metalc26 metalc ? ? W MG . MG ? ? ? 1_555 BA HOH . O ? ? B MG 122 B HOH 215 1_555 ? ? ? ? ? ? ? 1.800 ? ? metalc27 metalc ? ? W MG . MG ? ? ? 1_555 BA HOH . O ? ? B MG 122 B HOH 219 1_555 ? ? ? ? ? ? ? 2.157 ? ? metalc28 metalc ? ? Y MG . MG ? ? ? 1_555 BA HOH . O ? ? B MG 124 B HOH 216 1_555 ? ? ? ? ? ? ? 1.976 ? ? hydrog1 hydrog ? ? A GTP 1 N1 ? ? ? 1_555 A C 40 N3 ? ? B GTP 1 B C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A GTP 1 N2 ? ? ? 1_555 A C 40 O2 ? ? B GTP 1 B C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A GTP 1 O6 ? ? ? 1_555 A C 40 N4 ? ? B GTP 1 B C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 39 N3 ? ? B G 2 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 39 O2 ? ? B G 2 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 39 N4 ? ? B G 2 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A U 3 N3 ? ? ? 1_555 A A 38 N1 ? ? B U 3 B A 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A U 3 O4 ? ? ? 1_555 A A 38 N6 ? ? B U 3 B A 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 4 N1 ? ? ? 1_555 A U 37 O2 ? ? B G 4 B U 37 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog10 hydrog ? ? A G 4 O6 ? ? ? 1_555 A U 37 N3 ? ? B G 4 B U 37 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog11 hydrog ? ? A A 5 N1 ? ? ? 1_555 A U 36 N3 ? ? B A 5 B U 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A A 5 N6 ? ? ? 1_555 A U 36 O4 ? ? B A 5 B U 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 6 N3 ? ? ? 1_555 A G 35 N1 ? ? B C 6 B G 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 6 N4 ? ? ? 1_555 A G 35 O6 ? ? B C 6 B G 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 6 O2 ? ? ? 1_555 A G 35 N2 ? ? B C 6 B G 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A U 7 N3 ? ? ? 1_555 A A 32 N7 ? ? B U 7 B A 32 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog17 hydrog ? ? A U 7 O2 ? ? ? 1_555 A A 32 N6 ? ? B U 7 B A 32 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog18 hydrog ? ? A A 8 N6 ? ? ? 1_555 A G 31 N3 ? ? B A 8 B G 31 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog19 hydrog ? ? A A 8 N7 ? ? ? 1_555 A G 31 N2 ? ? B A 8 B G 31 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog20 hydrog ? ? A G 9 N1 ? ? ? 1_555 A C 30 N3 ? ? B G 9 B C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 9 N2 ? ? ? 1_555 A C 30 O2 ? ? B G 9 B C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 9 O6 ? ? ? 1_555 A C 30 N4 ? ? B G 9 B C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 9 N2 ? ? ? 1_555 A A 74 N3 ? ? B G 9 B A 74 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog24 hydrog ? ? A G 10 N1 ? ? ? 1_555 A C 29 N3 ? ? B G 10 B C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 10 N2 ? ? ? 1_555 A C 29 O2 ? ? B G 10 B C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 10 O6 ? ? ? 1_555 A C 29 N4 ? ? B G 10 B C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 10 N2 ? ? ? 1_555 A A 72 N1 ? ? B G 10 B A 72 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog28 hydrog ? ? A G 11 N2 ? ? ? 1_555 A U 13 O4 ? ? B G 11 B U 13 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog29 hydrog ? ? A G 11 N1 ? ? ? 1_555 A U 28 O4 ? ? B G 11 B U 28 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog30 hydrog ? ? A G 11 N2 ? ? ? 1_555 A A 71 N1 ? ? B G 11 B A 71 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog31 hydrog ? ? A U 12 O2 ? ? ? 1_555 A C 14 N4 ? ? B U 12 B C 14 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog32 hydrog ? ? A U 13 N3 ? ? ? 1_555 A U 28 O2 ? ? B U 13 B U 28 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog33 hydrog ? ? A U 13 O4 ? ? ? 1_555 A U 28 N3 ? ? B U 13 B U 28 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog34 hydrog ? ? A C 14 N3 ? ? ? 1_555 A G 27 N1 ? ? B C 14 B G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A C 14 N4 ? ? ? 1_555 A G 27 O6 ? ? B C 14 B G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A C 14 O2 ? ? ? 1_555 A G 27 N2 ? ? B C 14 B G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A C 15 N3 ? ? ? 1_555 A G 26 N1 ? ? B C 15 B G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 15 N4 ? ? ? 1_555 A G 26 O6 ? ? B C 15 B G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 15 O2 ? ? ? 1_555 A G 26 N2 ? ? B C 15 B G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 16 N1 ? ? ? 1_555 A C 25 N3 ? ? B G 16 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 16 N2 ? ? ? 1_555 A C 25 O2 ? ? B G 16 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 16 O6 ? ? ? 1_555 A C 25 N4 ? ? B G 16 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 24 N3 ? ? B G 17 B C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 24 O2 ? ? B G 17 B C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 24 N4 ? ? B G 17 B C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 18 N3 ? ? ? 1_555 A G 23 N1 ? ? B C 18 B G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A C 18 N4 ? ? ? 1_555 A G 23 O6 ? ? B C 18 B G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A C 18 O2 ? ? ? 1_555 A G 23 N2 ? ? B C 18 B G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 19 N2 ? ? ? 1_555 A A 22 N7 ? ? B G 19 B A 22 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog50 hydrog ? ? A C 29 O2 ? ? ? 1_555 A A 71 N6 ? ? B C 29 B A 71 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog51 hydrog ? ? A G 33 N2 ? ? ? 1_555 A A 61 N3 ? ? B G 33 B A 61 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog52 hydrog ? ? A G 41 N1 ? ? ? 1_555 A U 58 O2 ? ? B G 41 B U 58 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog53 hydrog ? ? A G 41 O6 ? ? ? 1_555 A U 58 N3 ? ? B G 41 B U 58 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog54 hydrog ? ? A A 42 N1 ? ? ? 1_555 A U 57 N3 ? ? B A 42 B U 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A A 42 N6 ? ? ? 1_555 A U 57 O4 ? ? B A 42 B U 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A C 43 N3 ? ? ? 1_555 A G 56 N1 ? ? B C 43 B G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A C 43 N4 ? ? ? 1_555 A G 56 O6 ? ? B C 43 B G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A C 43 O2 ? ? ? 1_555 A G 56 N2 ? ? B C 43 B G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A C 44 N3 ? ? ? 1_555 A G 55 N1 ? ? B C 44 B G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A C 44 N4 ? ? ? 1_555 A G 55 O6 ? ? B C 44 B G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 44 O2 ? ? ? 1_555 A G 55 N2 ? ? B C 44 B G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A G 45 N1 ? ? ? 1_555 A C 54 N3 ? ? B G 45 B C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A G 45 N2 ? ? ? 1_555 A C 54 O2 ? ? B G 45 B C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A G 45 O6 ? ? ? 1_555 A C 54 N4 ? ? B G 45 B C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A C 46 N3 ? ? ? 1_555 A G 53 N1 ? ? B C 46 B G 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A C 46 N4 ? ? ? 1_555 A G 53 O6 ? ? B C 46 B G 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A C 46 O2 ? ? ? 1_555 A G 53 N2 ? ? B C 46 B G 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A C 47 N3 ? ? ? 1_555 A G 52 N1 ? ? B C 47 B G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A C 47 N4 ? ? ? 1_555 A G 52 O6 ? ? B C 47 B G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A C 47 O2 ? ? ? 1_555 A G 52 N2 ? ? B C 47 B G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A G 48 N2 ? ? ? 1_555 A A 51 N7 ? ? B G 48 B A 51 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog72 hydrog ? ? A C 60 N3 ? ? ? 1_555 A G 80 N1 ? ? B C 60 B G 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A C 60 N4 ? ? ? 1_555 A G 80 O6 ? ? B C 60 B G 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A C 60 O2 ? ? ? 1_555 A G 80 N2 ? ? B C 60 B G 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 62 N3 ? ? ? 1_555 A G 83 N1 ? ? B C 62 B G 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A C 62 N4 ? ? ? 1_555 A G 83 O6 ? ? B C 62 B G 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A C 62 O2 ? ? ? 1_555 A G 83 N2 ? ? B C 62 B G 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A G 63 N2 ? ? ? 1_555 A A 82 N7 ? ? B G 63 B A 82 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog79 hydrog ? ? A G 63 N3 ? ? ? 1_555 A A 82 N6 ? ? B G 63 B A 82 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog80 hydrog ? ? A G 64 N7 ? ? ? 1_555 A G 81 N1 ? ? B G 64 B G 81 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog81 hydrog ? ? A G 64 O6 ? ? ? 1_555 A G 81 N2 ? ? B G 64 B G 81 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog82 hydrog ? ? A C 65 N4 ? ? ? 1_555 A G 79 O6 ? ? B C 65 B G 79 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog83 hydrog ? ? A G 66 N1 ? ? ? 1_555 A C 78 N3 ? ? B G 66 B C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A G 66 N2 ? ? ? 1_555 A C 78 O2 ? ? B G 66 B C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A G 66 O6 ? ? ? 1_555 A C 78 N4 ? ? B G 66 B C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A G 67 N1 ? ? ? 1_555 A C 77 N3 ? ? B G 67 B C 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A G 67 N2 ? ? ? 1_555 A C 77 O2 ? ? B G 67 B C 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A G 67 O6 ? ? ? 1_555 A C 77 N4 ? ? B G 67 B C 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A G 68 N1 ? ? ? 1_555 A C 76 N3 ? ? B G 68 B C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A G 68 N2 ? ? ? 1_555 A C 76 O2 ? ? B G 68 B C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A G 68 O6 ? ? ? 1_555 A C 76 N4 ? ? B G 68 B C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A A 69 N6 ? ? ? 1_555 A A 74 N7 ? ? B A 69 B A 74 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog93 hydrog ? ? A A 69 N7 ? ? ? 1_555 A A 74 N6 ? ? B A 69 B A 74 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A G 11 ? B G 11 ? 1_555 MG ? Y MG . ? B MG 124 ? 1_555 O4 ? A U 12 ? B U 12 ? 1_555 74.1 ? 2 O6 ? A G 11 ? B G 11 ? 1_555 MG ? Y MG . ? B MG 124 ? 1_555 O ? BA HOH . ? B HOH 216 ? 1_555 151.2 ? 3 O4 ? A U 12 ? B U 12 ? 1_555 MG ? Y MG . ? B MG 124 ? 1_555 O ? BA HOH . ? B HOH 216 ? 1_555 94.7 ? 4 O6 ? A G 31 ? B G 31 ? 1_555 MG ? L MG . ? B MG 111 ? 1_555 O ? BA HOH . ? B HOH 208 ? 1_555 80.2 ? 5 O6 ? A G 31 ? B G 31 ? 1_555 MG ? L MG . ? B MG 111 ? 1_555 O ? BA HOH . ? B HOH 220 ? 1_555 102.7 ? 6 O ? BA HOH . ? B HOH 208 ? 1_555 MG ? L MG . ? B MG 111 ? 1_555 O ? BA HOH . ? B HOH 220 ? 1_555 84.9 ? 7 OP1 ? A G 33 ? B G 33 ? 1_555 MG ? B MG . ? B MG 101 ? 1_555 OP1 ? A C 76 ? B C 76 ? 1_555 92.3 ? 8 OP1 ? A G 33 ? B G 33 ? 1_555 MG ? B MG . ? B MG 101 ? 1_555 OP2 ? A C 77 ? B C 77 ? 1_555 94.8 ? 9 OP1 ? A C 76 ? B C 76 ? 1_555 MG ? B MG . ? B MG 101 ? 1_555 OP2 ? A C 77 ? B C 77 ? 1_555 83.5 ? 10 OP1 ? A G 33 ? B G 33 ? 1_555 MG ? B MG . ? B MG 101 ? 1_555 O ? BA HOH . ? B HOH 207 ? 1_555 175.2 ? 11 OP1 ? A C 76 ? B C 76 ? 1_555 MG ? B MG . ? B MG 101 ? 1_555 O ? BA HOH . ? B HOH 207 ? 1_555 87.0 ? 12 OP2 ? A C 77 ? B C 77 ? 1_555 MG ? B MG . ? B MG 101 ? 1_555 O ? BA HOH . ? B HOH 207 ? 1_555 80.4 ? 13 OP1 ? A G 33 ? B G 33 ? 1_555 MG ? B MG . ? B MG 101 ? 1_555 O ? BA HOH . ? B HOH 210 ? 1_555 93.4 ? 14 OP1 ? A C 76 ? B C 76 ? 1_555 MG ? B MG . ? B MG 101 ? 1_555 O ? BA HOH . ? B HOH 210 ? 1_555 89.9 ? 15 OP2 ? A C 77 ? B C 77 ? 1_555 MG ? B MG . ? B MG 101 ? 1_555 O ? BA HOH . ? B HOH 210 ? 1_555 169.7 ? 16 O ? BA HOH . ? B HOH 207 ? 1_555 MG ? B MG . ? B MG 101 ? 1_555 O ? BA HOH . ? B HOH 210 ? 1_555 91.3 ? 17 OP1 ? A G 33 ? B G 33 ? 1_555 MG ? B MG . ? B MG 101 ? 1_555 O ? BA HOH . ? B HOH 214 ? 1_555 91.5 ? 18 OP1 ? A C 76 ? B C 76 ? 1_555 MG ? B MG . ? B MG 101 ? 1_555 O ? BA HOH . ? B HOH 214 ? 1_555 167.6 ? 19 OP2 ? A C 77 ? B C 77 ? 1_555 MG ? B MG . ? B MG 101 ? 1_555 O ? BA HOH . ? B HOH 214 ? 1_555 84.4 ? 20 O ? BA HOH . ? B HOH 207 ? 1_555 MG ? B MG . ? B MG 101 ? 1_555 O ? BA HOH . ? B HOH 214 ? 1_555 88.3 ? 21 O ? BA HOH . ? B HOH 210 ? 1_555 MG ? B MG . ? B MG 101 ? 1_555 O ? BA HOH . ? B HOH 214 ? 1_555 101.7 ? 22 OP2 ? A G 33 ? B G 33 ? 1_555 MG ? M MG . ? B MG 112 ? 1_555 O ? BA HOH . ? B HOH 203 ? 1_555 49.2 ? 23 OP1 ? A C 77 ? B C 77 ? 1_555 MG ? F MG . ? B MG 105 ? 1_555 O ? BA HOH . ? B HOH 203 ? 1_555 90.6 ? 24 O ? BA HOH . ? B HOH 205 ? 1_555 MG ? W MG . ? B MG 122 ? 1_555 O ? BA HOH . ? B HOH 211 ? 1_555 100.9 ? 25 O ? BA HOH . ? B HOH 205 ? 1_555 MG ? W MG . ? B MG 122 ? 1_555 O ? BA HOH . ? B HOH 215 ? 1_555 94.5 ? 26 O ? BA HOH . ? B HOH 211 ? 1_555 MG ? W MG . ? B MG 122 ? 1_555 O ? BA HOH . ? B HOH 215 ? 1_555 96.5 ? 27 O ? BA HOH . ? B HOH 205 ? 1_555 MG ? W MG . ? B MG 122 ? 1_555 O ? BA HOH . ? B HOH 219 ? 1_555 172.7 ? 28 O ? BA HOH . ? B HOH 211 ? 1_555 MG ? W MG . ? B MG 122 ? 1_555 O ? BA HOH . ? B HOH 219 ? 1_555 86.5 ? 29 O ? BA HOH . ? B HOH 215 ? 1_555 MG ? W MG . ? B MG 122 ? 1_555 O ? BA HOH . ? B HOH 219 ? 1_555 84.6 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B MG 101 ? 6 'binding site for residue MG B 101' AC2 Software B MG 102 ? 2 'binding site for residue MG B 102' AC3 Software B MG 103 ? 1 'binding site for residue MG B 103' AC4 Software B MG 104 ? 2 'binding site for residue MG B 104' AC5 Software B MG 105 ? 4 'binding site for residue MG B 105' AC6 Software B MG 106 ? 1 'binding site for residue MG B 106' AC7 Software B MG 107 ? 1 'binding site for residue MG B 107' AC8 Software B MG 110 ? 4 'binding site for residue MG B 110' AC9 Software B MG 111 ? 5 'binding site for residue MG B 111' AD1 Software B MG 112 ? 5 'binding site for residue MG B 112' AD2 Software B MG 113 ? 5 'binding site for residue MG B 113' AD3 Software B MG 115 ? 2 'binding site for residue MG B 115' AD4 Software B MG 116 ? 5 'binding site for residue MG B 116' AD5 Software B MG 117 ? 4 'binding site for residue MG B 117' AD6 Software B MG 118 ? 2 'binding site for residue MG B 118' AD7 Software B MG 119 ? 1 'binding site for residue MG B 119' AD8 Software B MG 121 ? 3 'binding site for residue MG B 121' AD9 Software B MG 122 ? 4 'binding site for residue MG B 122' AE1 Software B MG 123 ? 1 'binding site for residue MG B 123' AE2 Software B MG 124 ? 3 'binding site for residue MG B 124' AE3 Software B GAI 125 ? 6 'binding site for residue GAI B 125' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 G A 33 ? G B 33 . ? 1_555 ? 2 AC1 6 C A 76 ? C B 76 . ? 1_555 ? 3 AC1 6 C A 77 ? C B 77 . ? 1_555 ? 4 AC1 6 HOH BA . ? HOH B 207 . ? 1_555 ? 5 AC1 6 HOH BA . ? HOH B 210 . ? 1_555 ? 6 AC1 6 HOH BA . ? HOH B 214 . ? 1_555 ? 7 AC2 2 G A 31 ? G B 31 . ? 1_555 ? 8 AC2 2 MG N . ? MG B 113 . ? 1_555 ? 9 AC3 1 G A 52 ? G B 52 . ? 1_555 ? 10 AC4 2 G A 48 ? G B 48 . ? 1_555 ? 11 AC4 2 A A 50 ? A B 50 . ? 1_555 ? 12 AC5 4 G A 33 ? G B 33 . ? 1_555 ? 13 AC5 4 C A 77 ? C B 77 . ? 1_555 ? 14 AC5 4 MG M . ? MG B 112 . ? 1_555 ? 15 AC5 4 HOH BA . ? HOH B 203 . ? 1_555 ? 16 AC6 1 A A 34 ? A B 34 . ? 1_555 ? 17 AC7 1 A A 32 ? A B 32 . ? 1_555 ? 18 AC8 4 C A 30 ? C B 30 . ? 1_555 ? 19 AC8 4 G A 31 ? G B 31 . ? 1_555 ? 20 AC8 4 MG L . ? MG B 111 . ? 1_555 ? 21 AC8 4 MG N . ? MG B 113 . ? 1_555 ? 22 AC9 5 G A 31 ? G B 31 . ? 1_555 ? 23 AC9 5 MG K . ? MG B 110 . ? 1_555 ? 24 AC9 5 MG N . ? MG B 113 . ? 1_555 ? 25 AC9 5 HOH BA . ? HOH B 208 . ? 1_555 ? 26 AC9 5 HOH BA . ? HOH B 220 . ? 1_555 ? 27 AD1 5 A A 32 ? A B 32 . ? 1_555 ? 28 AD1 5 G A 33 ? G B 33 . ? 1_555 ? 29 AD1 5 MG F . ? MG B 105 . ? 1_555 ? 30 AD1 5 MG P . ? MG B 115 . ? 1_555 ? 31 AD1 5 HOH BA . ? HOH B 203 . ? 1_555 ? 32 AD2 5 G A 31 ? G B 31 . ? 1_555 ? 33 AD2 5 MG C . ? MG B 102 . ? 1_555 ? 34 AD2 5 MG K . ? MG B 110 . ? 1_555 ? 35 AD2 5 MG L . ? MG B 111 . ? 1_555 ? 36 AD2 5 HOH BA . ? HOH B 208 . ? 1_555 ? 37 AD3 2 MG M . ? MG B 112 . ? 1_555 ? 38 AD3 2 HOH BA . ? HOH B 217 . ? 1_555 ? 39 AD4 5 G A 33 ? G B 33 . ? 1_555 ? 40 AD4 5 C A 62 ? C B 62 . ? 1_555 ? 41 AD4 5 G A 63 ? G B 63 . ? 1_555 ? 42 AD4 5 G A 80 ? G B 80 . ? 1_555 ? 43 AD4 5 MG R . ? MG B 117 . ? 1_555 ? 44 AD5 4 A A 20 ? A B 20 . ? 6_554 ? 45 AD5 4 G A 81 ? G B 81 . ? 1_555 ? 46 AD5 4 MG Q . ? MG B 116 . ? 1_555 ? 47 AD5 4 HOH BA . ? HOH B 218 . ? 6_554 ? 48 AD6 2 A A 82 ? A B 82 . ? 1_555 ? 49 AD6 2 G A 83 ? G B 83 . ? 1_555 ? 50 AD7 1 A A 49 ? A B 49 . ? 1_555 ? 51 AD8 3 C A 65 ? C B 65 . ? 1_555 ? 52 AD8 3 G A 66 ? G B 66 . ? 1_555 ? 53 AD8 3 HOH BA . ? HOH B 219 . ? 1_555 ? 54 AD9 4 HOH BA . ? HOH B 205 . ? 1_555 ? 55 AD9 4 HOH BA . ? HOH B 211 . ? 1_555 ? 56 AD9 4 HOH BA . ? HOH B 215 . ? 1_555 ? 57 AD9 4 HOH BA . ? HOH B 219 . ? 1_555 ? 58 AE1 1 A A 71 ? A B 71 . ? 1_555 ? 59 AE2 3 G A 11 ? G B 11 . ? 1_555 ? 60 AE2 3 U A 12 ? U B 12 . ? 1_555 ? 61 AE2 3 HOH BA . ? HOH B 216 . ? 1_555 ? 62 AE3 6 G A 33 ? G B 33 . ? 1_555 ? 63 AE3 6 A A 34 ? A B 34 . ? 1_555 ? 64 AE3 6 G A 63 ? G B 63 . ? 1_555 ? 65 AE3 6 G A 64 ? G B 64 . ? 1_555 ? 66 AE3 6 G A 79 ? G B 79 . ? 1_555 ? 67 AE3 6 G A 81 ? G B 81 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 "HO2'" B U 37 ? ? O B HOH 202 ? ? 1.37 2 1 HN21 B GTP 1 ? ? O2 B C 40 ? ? 1.49 3 1 OP2 B G 33 ? ? MG B MG 105 ? ? 1.66 4 1 "O2'" B A 32 ? ? O B HOH 201 ? ? 1.95 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 A _pdbx_validate_rmsd_bond.auth_seq_id_1 21 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 P _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 A _pdbx_validate_rmsd_bond.auth_seq_id_2 22 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.523 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.084 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag Y # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 221 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id BA _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 GAI C C N N 111 GAI N1 N N N 112 GAI N2 N N N 113 GAI N3 N N N 114 GAI HN1 H N N 115 GAI HN21 H N N 116 GAI HN22 H N N 117 GAI HN31 H N N 118 GAI HN32 H N N 119 GTP PG P N N 120 GTP O1G O N N 121 GTP O2G O N N 122 GTP O3G O N N 123 GTP O3B O N N 124 GTP PB P N N 125 GTP O1B O N N 126 GTP O2B O N N 127 GTP O3A O N N 128 GTP PA P N N 129 GTP O1A O N N 130 GTP O2A O N N 131 GTP "O5'" O N N 132 GTP "C5'" C N N 133 GTP "C4'" C N R 134 GTP "O4'" O N N 135 GTP "C3'" C N S 136 GTP "O3'" O N N 137 GTP "C2'" C N R 138 GTP "O2'" O N N 139 GTP "C1'" C N R 140 GTP N9 N Y N 141 GTP C8 C Y N 142 GTP N7 N Y N 143 GTP C5 C Y N 144 GTP C6 C N N 145 GTP O6 O N N 146 GTP N1 N N N 147 GTP C2 C N N 148 GTP N2 N N N 149 GTP N3 N N N 150 GTP C4 C Y N 151 GTP HOG2 H N N 152 GTP HOG3 H N N 153 GTP HOB2 H N N 154 GTP HOA2 H N N 155 GTP "H5'" H N N 156 GTP "H5''" H N N 157 GTP "H4'" H N N 158 GTP "H3'" H N N 159 GTP "HO3'" H N N 160 GTP "H2'" H N N 161 GTP "HO2'" H N N 162 GTP "H1'" H N N 163 GTP H8 H N N 164 GTP HN1 H N N 165 GTP HN21 H N N 166 GTP HN22 H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 K K K N N 171 MG MG MG N N 172 U OP3 O N N 173 U P P N N 174 U OP1 O N N 175 U OP2 O N N 176 U "O5'" O N N 177 U "C5'" C N N 178 U "C4'" C N R 179 U "O4'" O N N 180 U "C3'" C N S 181 U "O3'" O N N 182 U "C2'" C N R 183 U "O2'" O N N 184 U "C1'" C N R 185 U N1 N N N 186 U C2 C N N 187 U O2 O N N 188 U N3 N N N 189 U C4 C N N 190 U O4 O N N 191 U C5 C N N 192 U C6 C N N 193 U HOP3 H N N 194 U HOP2 H N N 195 U "H5'" H N N 196 U "H5''" H N N 197 U "H4'" H N N 198 U "H3'" H N N 199 U "HO3'" H N N 200 U "H2'" H N N 201 U "HO2'" H N N 202 U "H1'" H N N 203 U H3 H N N 204 U H5 H N N 205 U H6 H N N 206 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 GAI C N1 doub N N 116 GAI C N2 sing N N 117 GAI C N3 sing N N 118 GAI N1 HN1 sing N N 119 GAI N2 HN21 sing N N 120 GAI N2 HN22 sing N N 121 GAI N3 HN31 sing N N 122 GAI N3 HN32 sing N N 123 GTP PG O1G doub N N 124 GTP PG O2G sing N N 125 GTP PG O3G sing N N 126 GTP PG O3B sing N N 127 GTP O2G HOG2 sing N N 128 GTP O3G HOG3 sing N N 129 GTP O3B PB sing N N 130 GTP PB O1B doub N N 131 GTP PB O2B sing N N 132 GTP PB O3A sing N N 133 GTP O2B HOB2 sing N N 134 GTP O3A PA sing N N 135 GTP PA O1A doub N N 136 GTP PA O2A sing N N 137 GTP PA "O5'" sing N N 138 GTP O2A HOA2 sing N N 139 GTP "O5'" "C5'" sing N N 140 GTP "C5'" "C4'" sing N N 141 GTP "C5'" "H5'" sing N N 142 GTP "C5'" "H5''" sing N N 143 GTP "C4'" "O4'" sing N N 144 GTP "C4'" "C3'" sing N N 145 GTP "C4'" "H4'" sing N N 146 GTP "O4'" "C1'" sing N N 147 GTP "C3'" "O3'" sing N N 148 GTP "C3'" "C2'" sing N N 149 GTP "C3'" "H3'" sing N N 150 GTP "O3'" "HO3'" sing N N 151 GTP "C2'" "O2'" sing N N 152 GTP "C2'" "C1'" sing N N 153 GTP "C2'" "H2'" sing N N 154 GTP "O2'" "HO2'" sing N N 155 GTP "C1'" N9 sing N N 156 GTP "C1'" "H1'" sing N N 157 GTP N9 C8 sing Y N 158 GTP N9 C4 sing Y N 159 GTP C8 N7 doub Y N 160 GTP C8 H8 sing N N 161 GTP N7 C5 sing Y N 162 GTP C5 C6 sing N N 163 GTP C5 C4 doub Y N 164 GTP C6 O6 doub N N 165 GTP C6 N1 sing N N 166 GTP N1 C2 sing N N 167 GTP N1 HN1 sing N N 168 GTP C2 N2 sing N N 169 GTP C2 N3 doub N N 170 GTP N2 HN21 sing N N 171 GTP N2 HN22 sing N N 172 GTP N3 C4 sing N N 173 HOH O H1 sing N N 174 HOH O H2 sing N N 175 U OP3 P sing N N 176 U OP3 HOP3 sing N N 177 U P OP1 doub N N 178 U P OP2 sing N N 179 U P "O5'" sing N N 180 U OP2 HOP2 sing N N 181 U "O5'" "C5'" sing N N 182 U "C5'" "C4'" sing N N 183 U "C5'" "H5'" sing N N 184 U "C5'" "H5''" sing N N 185 U "C4'" "O4'" sing N N 186 U "C4'" "C3'" sing N N 187 U "C4'" "H4'" sing N N 188 U "O4'" "C1'" sing N N 189 U "C3'" "O3'" sing N N 190 U "C3'" "C2'" sing N N 191 U "C3'" "H3'" sing N N 192 U "O3'" "HO3'" sing N N 193 U "C2'" "O2'" sing N N 194 U "C2'" "C1'" sing N N 195 U "C2'" "H2'" sing N N 196 U "O2'" "HO2'" sing N N 197 U "C1'" N1 sing N N 198 U "C1'" "H1'" sing N N 199 U N1 C2 sing N N 200 U N1 C6 sing N N 201 U C2 O2 doub N N 202 U C2 N3 sing N N 203 U N3 C4 sing N N 204 U N3 H3 sing N N 205 U C4 O4 doub N N 206 U C4 C5 sing N N 207 U C5 C6 doub N N 208 U C5 H5 sing N N 209 U C6 H6 sing N N 210 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5U3G 'double helix' 5U3G 'a-form double helix' 5U3G tetraloop 5U3G 'bulge loop' 5U3G 'mismatched base pair' 5U3G 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A A 22 1_555 A G 19 1_555 -8.232 -4.971 -0.211 -16.968 3.054 -55.968 1 B_A22:G19_B B 22 ? B 19 ? ? ? 1 A G 23 1_555 A C 18 1_555 -0.314 -0.220 0.485 7.991 -4.966 -0.834 2 B_G23:C18_B B 23 ? B 18 ? 19 1 1 A C 24 1_555 A G 17 1_555 0.186 -0.189 0.423 1.740 -12.942 1.607 3 B_C24:G17_B B 24 ? B 17 ? 19 1 1 A C 25 1_555 A G 16 1_555 0.293 -0.117 -0.213 0.443 -10.608 2.504 4 B_C25:G16_B B 25 ? B 16 ? 19 1 1 A G 26 1_555 A C 15 1_555 -0.252 -0.058 -0.204 -2.899 -2.254 3.244 5 B_G26:C15_B B 26 ? B 15 ? 19 1 1 A G 27 1_555 A C 14 1_555 -0.205 -0.158 -0.138 -4.360 -5.100 2.863 6 B_G27:C14_B B 27 ? B 14 ? 19 1 1 A U 28 1_555 A U 13 1_555 3.134 -1.741 -0.299 -13.969 3.897 -17.784 7 B_U28:U13_B B 28 ? B 13 ? 16 1 1 A G 11 1_555 A A 71 1_555 3.892 3.402 1.548 -22.455 -46.592 84.012 8 B_G11:A71_B B 11 ? B 71 ? ? ? 1 A C 29 1_555 A G 10 1_555 0.130 0.020 -0.117 19.421 -16.641 0.600 9 B_C29:G10_B B 29 ? B 10 ? 19 1 1 A C 30 1_555 A G 9 1_555 0.403 -0.251 0.149 3.801 -6.158 -0.788 10 B_C30:G9_B B 30 ? B 9 ? 19 1 1 A G 31 1_555 A A 8 1_555 6.731 -4.527 0.159 -0.787 -13.785 -8.029 11 B_G31:A8_B B 31 ? B 8 ? 11 10 1 A A 32 1_555 A U 7 1_555 -4.226 -2.303 0.041 8.271 -6.272 -91.619 12 B_A32:U7_B B 32 ? B 7 ? 24 4 1 A G 35 1_555 A C 6 1_555 -0.225 -0.168 0.258 -0.803 -8.277 2.287 13 B_G35:C6_B B 35 ? B 6 ? 19 1 1 A U 36 1_555 A A 5 1_555 -0.094 -0.169 0.122 -3.630 -12.565 0.586 14 B_U36:A5_B B 36 ? B 5 ? 20 1 1 A U 37 1_555 A G 4 1_555 2.392 -0.615 0.017 -3.933 -8.004 -2.765 15 B_U37:G4_B B 37 ? B 4 ? 28 1 1 A A 38 1_555 A U 3 1_555 0.036 -0.064 -0.207 -1.063 -0.439 0.152 16 B_A38:U3_B B 38 ? B 3 ? 20 1 1 A C 39 1_555 A G 2 1_555 0.161 -0.226 -0.198 5.357 -3.130 0.319 17 B_C39:G2_B B 39 ? B 2 ? 19 1 1 A C 40 1_555 A GTP 1 1_555 0.242 -0.286 -0.164 -0.045 0.338 4.529 18 B_C40:GTP1_B B 40 ? B 1 ? 19 1 1 A G 41 1_555 A U 58 1_555 -2.297 0.095 -0.244 -0.566 -2.272 -5.303 19 B_G41:U58_B B 41 ? B 58 ? 28 1 1 A A 42 1_555 A U 57 1_555 0.022 -0.056 0.118 11.985 -9.474 -1.005 20 B_A42:U57_B B 42 ? B 57 ? 20 1 1 A C 43 1_555 A G 56 1_555 0.243 -0.141 0.488 2.101 -11.801 1.583 21 B_C43:G56_B B 43 ? B 56 ? 19 1 1 A C 44 1_555 A G 55 1_555 0.214 -0.165 0.179 -0.841 -6.557 1.212 22 B_C44:G55_B B 44 ? B 55 ? 19 1 1 A G 45 1_555 A C 54 1_555 -0.209 -0.152 0.090 -3.081 -6.702 0.870 23 B_G45:C54_B B 45 ? B 54 ? 19 1 1 A C 46 1_555 A G 53 1_555 0.260 -0.083 0.227 0.579 -3.213 1.872 24 B_C46:G53_B B 46 ? B 53 ? 19 1 1 A C 47 1_555 A G 52 1_555 0.223 -0.061 -0.157 1.028 -0.916 3.488 25 B_C47:G52_B B 47 ? B 52 ? 19 1 1 A G 48 1_555 A A 51 1_555 7.158 -5.395 0.808 5.077 -2.505 -23.798 26 B_G48:A51_B B 48 ? B 51 ? ? 10 1 A G 33 1_555 A A 61 1_555 -2.727 -7.301 1.061 -37.438 -17.722 -155.570 27 B_G33:A61_B B 33 ? B 61 ? ? 12 1 A G 80 1_555 A C 60 1_555 -0.254 -0.209 0.335 -12.033 -16.107 -2.192 28 B_G80:C60_B B 80 ? B 60 ? 19 1 1 A C 62 1_555 A G 83 1_555 0.185 -0.136 -0.080 -2.393 0.620 1.467 29 B_C62:G83_B B 62 ? B 83 ? 19 1 1 A G 63 1_555 A A 82 1_555 6.735 -4.358 0.118 3.050 -0.280 -2.229 30 B_G63:A82_B B 63 ? B 82 ? 11 10 1 A G 64 1_555 A G 81 1_555 -5.463 -0.014 -0.699 1.108 -11.052 -118.642 31 B_G64:G81_B B 64 ? B 81 ? 7 4 1 A C 65 1_555 A G 79 1_555 1.910 -6.188 -1.009 9.475 -4.195 138.799 32 B_C65:G79_B B 65 ? B 79 ? ? ? 1 A G 66 1_555 A C 78 1_555 -0.196 -0.110 -0.295 -3.954 -3.057 2.033 33 B_G66:C78_B B 66 ? B 78 ? 19 1 1 A G 67 1_555 A C 77 1_555 -0.204 -0.195 0.098 -2.075 -7.925 -2.140 34 B_G67:C77_B B 67 ? B 77 ? 19 1 1 A G 68 1_555 A C 76 1_555 -0.288 -0.221 0.113 -8.850 -13.994 -0.429 35 B_G68:C76_B B 68 ? B 76 ? 19 1 1 A A 69 1_555 A A 74 1_555 6.230 -5.276 0.150 8.371 1.499 179.615 36 B_A69:A74_B B 69 ? B 74 ? 2 8 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A A 22 1_555 A G 19 1_555 A G 23 1_555 A C 18 1_555 3.750 -2.099 2.665 -0.806 -4.367 57.664 -1.977 -3.915 2.756 -4.521 0.835 57.820 1 BB_A22G23:C18G19_BB B 22 ? B 19 ? B 23 ? B 18 ? 1 A G 23 1_555 A C 18 1_555 A C 24 1_555 A G 17 1_555 0.135 -1.726 3.258 -0.928 1.808 37.692 -2.897 -0.326 3.171 2.796 1.435 37.745 2 BB_G23C24:G17C18_BB B 23 ? B 18 ? B 24 ? B 17 ? 1 A C 24 1_555 A G 17 1_555 A C 25 1_555 A G 16 1_555 -0.471 -1.750 3.101 3.894 5.833 33.069 -3.857 1.375 2.691 10.106 -6.748 33.785 3 BB_C24C25:G16G17_BB B 24 ? B 17 ? B 25 ? B 16 ? 1 A C 25 1_555 A G 16 1_555 A G 26 1_555 A C 15 1_555 0.387 -1.856 3.389 -1.527 7.753 25.548 -5.934 -1.216 2.692 17.019 3.351 26.723 4 BB_C25G26:C15G16_BB B 25 ? B 16 ? B 26 ? B 15 ? 1 A G 26 1_555 A C 15 1_555 A G 27 1_555 A C 14 1_555 0.264 -1.857 3.322 0.475 3.448 31.577 -4.016 -0.396 3.111 6.312 -0.870 31.763 5 BB_G26G27:C14C15_BB B 26 ? B 15 ? B 27 ? B 14 ? 1 A G 27 1_555 A C 14 1_555 A U 28 1_555 A U 13 1_555 -0.404 -2.168 3.575 3.473 7.237 47.025 -3.286 0.790 3.191 8.993 -4.316 47.667 6 BB_G27U28:U13C14_BB B 27 ? B 14 ? B 28 ? B 13 ? 1 A U 28 1_555 A U 13 1_555 A G 11 1_555 A A 71 1_555 -0.898 -2.709 -3.460 -130.049 -101.572 122.987 -1.776 0.985 -1.921 -51.340 65.734 172.863 7 BB_U28G11:A71U13_BB B 28 ? B 13 ? B 11 ? B 71 ? 1 A G 11 1_555 A A 71 1_555 A C 29 1_555 A G 10 1_555 3.001 -2.146 1.042 153.313 24.347 94.367 -1.194 -0.829 2.535 12.681 -79.851 163.239 8 BB_G11C29:G10A71_BB B 11 ? B 71 ? B 29 ? B 10 ? 1 A C 29 1_555 A G 10 1_555 A C 30 1_555 A G 9 1_555 -0.694 -2.131 3.574 -6.147 9.322 34.997 -4.703 0.234 3.003 15.036 9.915 36.682 9 BB_C29C30:G9G10_BB B 29 ? B 10 ? B 30 ? B 9 ? 1 A C 30 1_555 A G 9 1_555 A G 31 1_555 A A 8 1_555 -1.322 -0.794 3.570 5.458 9.059 60.901 -1.222 1.558 3.316 8.865 -5.341 61.725 10 BB_C30G31:A8G9_BB B 30 ? B 9 ? B 31 ? B 8 ? 1 A G 31 1_555 A A 8 1_555 A A 32 1_555 A U 7 1_555 -4.769 -0.274 3.106 -4.079 -0.987 -11.625 2.121 -25.650 1.333 4.680 -19.330 -12.356 11 BB_G31A32:U7A8_BB B 31 ? B 8 ? B 32 ? B 7 ? 1 A A 32 1_555 A U 7 1_555 A G 35 1_555 A C 6 1_555 2.396 -2.691 3.420 -3.292 1.721 81.589 -2.102 -1.918 3.291 1.316 2.518 81.659 12 BB_A32G35:C6U7_BB B 32 ? B 7 ? B 35 ? B 6 ? 1 A G 35 1_555 A C 6 1_555 A U 36 1_555 A A 5 1_555 -0.833 -1.853 3.265 -0.544 1.782 31.008 -3.797 1.453 3.170 3.329 1.016 31.063 13 BB_G35U36:A5C6_BB B 35 ? B 6 ? B 36 ? B 5 ? 1 A U 36 1_555 A A 5 1_555 A U 37 1_555 A G 4 1_555 0.153 -1.103 3.314 2.377 2.853 41.211 -1.867 0.038 3.237 4.043 -3.369 41.371 14 BB_U36U37:G4A5_BB B 36 ? B 5 ? B 37 ? B 4 ? 1 A U 37 1_555 A G 4 1_555 A A 38 1_555 A U 3 1_555 -0.012 -1.835 3.117 1.773 7.653 23.309 -6.350 0.501 2.393 18.288 -4.238 24.580 15 BB_U37A38:U3G4_BB B 37 ? B 4 ? B 38 ? B 3 ? 1 A A 38 1_555 A U 3 1_555 A C 39 1_555 A G 2 1_555 0.441 -2.254 3.255 0.313 -0.414 25.992 -4.896 -0.895 3.295 -0.921 -0.695 25.997 16 BB_A38C39:G2U3_BB B 38 ? B 3 ? B 39 ? B 2 ? 1 A C 39 1_555 A G 2 1_555 A C 40 1_555 A GTP 1 1_555 0.326 -2.404 3.424 -0.393 6.774 27.792 -6.343 -0.745 2.767 13.842 0.803 28.593 17 BB_C39C40:GTP1G2_BB B 39 ? B 2 ? B 40 ? B 1 ? 1 A C 40 1_555 A GTP 1 1_555 A G 41 1_555 A U 58 1_555 3.888 -1.080 3.207 -0.278 10.792 56.059 -1.697 -4.088 2.953 11.365 0.293 57.006 18 BB_C40G41:U58GTP1_BB B 40 ? B 1 ? B 41 ? B 58 ? 1 A G 41 1_555 A U 58 1_555 A A 42 1_555 A U 57 1_555 -0.416 -1.759 2.975 -9.305 9.738 37.089 -3.604 -0.332 2.484 14.726 14.072 39.378 19 BB_G41A42:U57U58_BB B 41 ? B 58 ? B 42 ? B 57 ? 1 A A 42 1_555 A U 57 1_555 A C 43 1_555 A G 56 1_555 0.146 -2.028 3.438 -5.452 4.865 32.351 -4.377 -1.176 3.045 8.596 9.633 33.145 20 BB_A42C43:G56U57_BB B 42 ? B 57 ? B 43 ? B 56 ? 1 A C 43 1_555 A G 56 1_555 A C 44 1_555 A G 55 1_555 -0.340 -2.096 3.164 2.601 7.337 33.644 -4.554 0.935 2.629 12.469 -4.420 34.507 21 BB_C43C44:G55G56_BB B 43 ? B 56 ? B 44 ? B 55 ? 1 A C 44 1_555 A G 55 1_555 A G 45 1_555 A C 54 1_555 -0.339 -1.869 2.973 -0.221 11.964 29.263 -5.217 0.590 2.070 22.531 0.416 31.565 22 BB_C44G45:C54G55_BB B 44 ? B 55 ? B 45 ? B 54 ? 1 A G 45 1_555 A C 54 1_555 A C 46 1_555 A G 53 1_555 0.088 -1.567 3.167 -2.604 2.087 33.295 -3.050 -0.563 3.051 3.631 4.530 33.457 23 BB_G45C46:G53C54_BB B 45 ? B 54 ? B 46 ? B 53 ? 1 A C 46 1_555 A G 53 1_555 A C 47 1_555 A G 52 1_555 0.305 -2.015 3.182 3.143 3.343 32.200 -4.153 -0.024 2.979 5.989 -5.630 32.517 24 BB_C46C47:G52G53_BB B 46 ? B 53 ? B 47 ? B 52 ? 1 A C 47 1_555 A G 52 1_555 A G 48 1_555 A A 51 1_555 -3.546 -1.147 3.112 -0.789 10.660 50.980 -1.968 3.995 2.885 12.230 0.906 52.015 25 BB_C47G48:A51G52_BB B 47 ? B 52 ? B 48 ? B 51 ? 1 A G 33 1_555 A A 61 1_555 A G 80 1_555 A C 60 1_555 0.328 4.338 2.554 -167.134 -44.598 47.629 2.364 -0.881 -0.280 -22.838 85.587 173.580 26 BB_G33G80:C60A61_BB B 33 ? B 61 ? B 80 ? B 60 ? 1 A C 62 1_555 A G 83 1_555 A G 63 1_555 A A 82 1_555 -0.685 -0.825 3.306 -0.517 2.471 60.925 -0.932 0.650 3.279 2.435 0.510 60.973 27 BB_C62G63:A82G83_BB B 62 ? B 83 ? B 63 ? B 82 ? 1 A G 63 1_555 A A 82 1_555 A G 64 1_555 A G 81 1_555 -5.999 -0.590 3.124 0.024 0.029 -15.379 2.182 -22.399 3.134 -0.109 0.090 -15.379 28 BB_G63G64:G81A82_BB B 63 ? B 82 ? B 64 ? B 81 ? 1 A G 64 1_555 A G 81 1_555 A C 65 1_555 A G 79 1_555 1.135 -0.390 3.580 -0.473 0.943 -78.547 0.279 0.882 3.590 -0.745 -0.374 -78.553 29 BB_G64C65:G79G81_BB B 64 ? B 81 ? B 65 ? B 79 ? 1 A C 65 1_555 A G 79 1_555 A G 66 1_555 A C 78 1_555 1.846 0.168 3.547 -7.197 -3.113 138.842 0.109 -1.030 3.501 -1.662 3.843 138.942 30 BB_C65G66:C78G79_BB B 65 ? B 79 ? B 66 ? B 78 ? 1 A G 66 1_555 A C 78 1_555 A G 67 1_555 A C 77 1_555 -0.253 -1.978 3.232 -6.572 5.277 28.718 -4.866 -0.796 2.819 10.361 12.903 29.904 31 BB_G66G67:C77C78_BB B 66 ? B 78 ? B 67 ? B 77 ? 1 A G 67 1_555 A C 77 1_555 A G 68 1_555 A C 76 1_555 0.822 -1.944 3.171 4.052 9.662 38.146 -3.914 -0.780 2.689 14.454 -6.062 39.507 32 BB_G67G68:C76C77_BB B 67 ? B 77 ? B 68 ? B 76 ? 1 A G 68 1_555 A C 76 1_555 A A 69 1_555 A A 74 1_555 -1.078 -3.480 -0.404 -168.951 -31.713 103.067 -1.731 0.482 0.740 -16.018 85.337 174.965 33 BB_G68A69:A74C76_BB B 68 ? B 76 ? B 69 ? B 74 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM086766 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM118174 2 'National Institutes of Health/National Center for Research Resources (NIH/NCRR)' 'United States' RR15301 3 # _atom_sites.entry_id 5U3G _atom_sites.fract_transf_matrix[1][1] 0.014828 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012760 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010117 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H K MG N O P # loop_