HEADER OXYGEN TRANSPORT 02-DEC-16 5U3I TITLE CRYSTAL STRUCTURE OF CARBONMONOXY HEMOGLOBIN S (LIGANDED SICKLE CELL TITLE 2 HEMOGLOBIN) COMPLEXED WITH GBT COMPOUND 31 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMOGLOBIN SUBUNIT ALPHA; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: ALPHA-GLOBIN,HEMOGLOBIN ALPHA CHAIN; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HEMOGLOBIN SUBUNIT BETA; COMPND 7 CHAIN: B, D; COMPND 8 SYNONYM: BETA-GLOBIN,HEMOGLOBIN BETA CHAIN; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_COMMON: HUMAN; SOURCE 8 ORGANISM_TAXID: 9606 KEYWDS R2 QUATERNARY STATE, OXYGEN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR J.R.PARTRIDGE,R.M.CHOY,Z.LI,B.METCALF REVDAT 4 04-OCT-23 5U3I 1 LINK REVDAT 3 27-NOV-19 5U3I 1 REMARK REVDAT 2 12-APR-17 5U3I 1 JRNL REVDAT 1 22-FEB-17 5U3I 0 JRNL AUTH B.METCALF,C.CHUANG,K.DUFU,M.P.PATEL,A.SILVA-GARCIA, JRNL AUTH 2 C.JOHNSON,Q.LU,J.R.PARTRIDGE,L.PATSKOVSKA,Y.PATSKOVSKY, JRNL AUTH 3 S.C.ALMO,M.P.JACOBSON,L.HUA,Q.XU,S.L.GWALTNEY,C.YEE, JRNL AUTH 4 J.HARRIS,B.P.MORGAN,J.JAMES,D.XU,A.HUTCHALEELAHA, JRNL AUTH 5 K.PAULVANNAN,D.OKSENBERG,Z.LI JRNL TITL DISCOVERY OF GBT440, AN ORALLY BIOAVAILABLE R-STATE JRNL TITL 2 STABILIZER OF SICKLE CELL HEMOGLOBIN. JRNL REF ACS MED CHEM LETT V. 8 321 2017 JRNL REFN ISSN 1948-5875 JRNL PMID 28337324 JRNL DOI 10.1021/ACSMEDCHEMLETT.6B00491 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 43667 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.590 REMARK 3 FREE R VALUE TEST SET COUNT : 2003 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.8083 - 4.6941 1.00 3195 153 0.1607 0.2030 REMARK 3 2 4.6941 - 3.7281 1.00 3035 145 0.1658 0.2111 REMARK 3 3 3.7281 - 3.2575 1.00 3014 143 0.2069 0.2626 REMARK 3 4 3.2575 - 2.9600 1.00 2975 148 0.2431 0.2757 REMARK 3 5 2.9600 - 2.7480 1.00 2978 138 0.2467 0.2814 REMARK 3 6 2.7480 - 2.5861 1.00 2949 148 0.2553 0.3200 REMARK 3 7 2.5861 - 2.4566 1.00 2961 139 0.2438 0.2915 REMARK 3 8 2.4566 - 2.3497 1.00 2945 144 0.2485 0.2831 REMARK 3 9 2.3497 - 2.2593 1.00 2966 149 0.2678 0.3318 REMARK 3 10 2.2593 - 2.1814 1.00 2922 135 0.2749 0.3209 REMARK 3 11 2.1814 - 2.1132 1.00 2902 138 0.2840 0.3283 REMARK 3 12 2.1132 - 2.0528 1.00 2935 137 0.3152 0.3710 REMARK 3 13 2.0528 - 1.9988 1.00 2969 141 0.3398 0.4349 REMARK 3 14 1.9988 - 1.9500 1.00 2918 145 0.3469 0.3802 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.57 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4739 REMARK 3 ANGLE : 0.971 6506 REMARK 3 CHIRALITY : 0.045 705 REMARK 3 PLANARITY : 0.006 811 REMARK 3 DIHEDRAL : 15.534 2690 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 16.8883 -2.5457 -21.6640 REMARK 3 T TENSOR REMARK 3 T11: 0.2906 T22: 0.2821 REMARK 3 T33: 0.4237 T12: -0.0402 REMARK 3 T13: 0.0953 T23: 0.0456 REMARK 3 L TENSOR REMARK 3 L11: 2.1171 L22: 3.7542 REMARK 3 L33: 9.9408 L12: 0.6146 REMARK 3 L13: 0.8858 L23: 3.8759 REMARK 3 S TENSOR REMARK 3 S11: 0.0555 S12: -0.1106 S13: 0.2133 REMARK 3 S21: 0.5324 S22: -0.2851 S23: 0.3433 REMARK 3 S31: 0.8970 S32: -0.2368 S33: 0.0889 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5U3I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1000225259. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.11 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43683 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 17.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.40 REMARK 200 R MERGE FOR SHELL (I) : 1.70000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5E83 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES PH 7.4 20 MM NACL 30 % REMARK 280 PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.69250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.31850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.52000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 86.31850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.69250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.52000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -109.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL D 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N VAL A 1 C06 7SJ A 203 0.47 REMARK 500 N VAL A 1 H1 7SJ A 203 1.42 REMARK 500 FE HEM D 201 C CMO D 202 1.46 REMARK 500 FE HEM C 201 C CMO C 202 1.68 REMARK 500 CA VAL A 1 C06 7SJ A 203 1.70 REMARK 500 N VAL A 1 C05 7SJ A 203 1.79 REMARK 500 FE HEM A 201 C CMO A 202 1.83 REMARK 500 FE HEM B 201 C CMO B 202 1.96 REMARK 500 NZ LYS C 7 OD1 ASP C 74 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU C 29 CB - CG - CD2 ANGL. DEV. = -16.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 75 42.03 -141.29 REMARK 500 LEU A 113 56.07 -145.59 REMARK 500 GLU B 22 -34.12 -134.29 REMARK 500 ASP C 75 51.00 -145.67 REMARK 500 LEU C 113 59.32 -119.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 7SJ A 203 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 87 NE2 REMARK 620 2 HEM A 201 NA 93.9 REMARK 620 3 HEM A 201 NB 103.9 84.5 REMARK 620 4 HEM A 201 NC 84.9 176.9 93.0 REMARK 620 5 HEM A 201 ND 75.1 94.2 178.4 88.2 REMARK 620 6 CMO A 202 O 176.3 86.6 79.8 94.8 101.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 92 NE2 REMARK 620 2 HEM B 201 NA 85.6 REMARK 620 3 HEM B 201 NB 86.4 90.4 REMARK 620 4 HEM B 201 NC 90.2 175.7 88.1 REMARK 620 5 HEM B 201 ND 90.5 88.9 176.9 92.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM C 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 87 NE2 REMARK 620 2 HEM C 201 NA 87.4 REMARK 620 3 HEM C 201 NB 90.8 92.1 REMARK 620 4 HEM C 201 NC 98.7 173.8 87.6 REMARK 620 5 HEM C 201 ND 99.5 87.2 169.6 92.0 REMARK 620 6 CMO C 202 O 161.6 94.8 70.9 79.2 98.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM D 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 92 NE2 REMARK 620 2 HEM D 201 NA 77.7 REMARK 620 3 HEM D 201 NB 85.0 88.7 REMARK 620 4 HEM D 201 NC 96.1 173.5 88.6 REMARK 620 5 HEM D 201 ND 91.8 90.4 176.8 92.0 REMARK 620 6 CMO D 202 O 174.3 96.6 95.1 89.6 88.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CMO A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 7SJ A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CMO B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CMO C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CMO D 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5UFJ RELATED DB: PDB DBREF 5U3I A 1 141 UNP P69905 HBA_HUMAN 2 142 DBREF 5U3I B 1 146 UNP P68871 HBB_HUMAN 2 147 DBREF 5U3I C 1 141 UNP P69905 HBA_HUMAN 2 142 DBREF 5U3I D 1 146 UNP P68871 HBB_HUMAN 2 147 SEQADV 5U3I VAL B 6 UNP P68871 GLU 7 ENGINEERED MUTATION SEQADV 5U3I VAL D 6 UNP P68871 GLU 7 ENGINEERED MUTATION SEQRES 1 A 141 VAL LEU SER PRO ALA ASP LYS THR ASN VAL LYS ALA ALA SEQRES 2 A 141 TRP GLY LYS VAL GLY ALA HIS ALA GLY GLU TYR GLY ALA SEQRES 3 A 141 GLU ALA LEU GLU ARG MET PHE LEU SER PHE PRO THR THR SEQRES 4 A 141 LYS THR TYR PHE PRO HIS PHE ASP LEU SER HIS GLY SER SEQRES 5 A 141 ALA GLN VAL LYS GLY HIS GLY LYS LYS VAL ALA ASP ALA SEQRES 6 A 141 LEU THR ASN ALA VAL ALA HIS VAL ASP ASP MET PRO ASN SEQRES 7 A 141 ALA LEU SER ALA LEU SER ASP LEU HIS ALA HIS LYS LEU SEQRES 8 A 141 ARG VAL ASP PRO VAL ASN PHE LYS LEU LEU SER HIS CYS SEQRES 9 A 141 LEU LEU VAL THR LEU ALA ALA HIS LEU PRO ALA GLU PHE SEQRES 10 A 141 THR PRO ALA VAL HIS ALA SER LEU ASP LYS PHE LEU ALA SEQRES 11 A 141 SER VAL SER THR VAL LEU THR SER LYS TYR ARG SEQRES 1 B 146 VAL HIS LEU THR PRO VAL GLU LYS SER ALA VAL THR ALA SEQRES 2 B 146 LEU TRP GLY LYS VAL ASN VAL ASP GLU VAL GLY GLY GLU SEQRES 3 B 146 ALA LEU GLY ARG LEU LEU VAL VAL TYR PRO TRP THR GLN SEQRES 4 B 146 ARG PHE PHE GLU SER PHE GLY ASP LEU SER THR PRO ASP SEQRES 5 B 146 ALA VAL MET GLY ASN PRO LYS VAL LYS ALA HIS GLY LYS SEQRES 6 B 146 LYS VAL LEU GLY ALA PHE SER ASP GLY LEU ALA HIS LEU SEQRES 7 B 146 ASP ASN LEU LYS GLY THR PHE ALA THR LEU SER GLU LEU SEQRES 8 B 146 HIS CYS ASP LYS LEU HIS VAL ASP PRO GLU ASN PHE ARG SEQRES 9 B 146 LEU LEU GLY ASN VAL LEU VAL CYS VAL LEU ALA HIS HIS SEQRES 10 B 146 PHE GLY LYS GLU PHE THR PRO PRO VAL GLN ALA ALA TYR SEQRES 11 B 146 GLN LYS VAL VAL ALA GLY VAL ALA ASN ALA LEU ALA HIS SEQRES 12 B 146 LYS TYR HIS SEQRES 1 C 141 VAL LEU SER PRO ALA ASP LYS THR ASN VAL LYS ALA ALA SEQRES 2 C 141 TRP GLY LYS VAL GLY ALA HIS ALA GLY GLU TYR GLY ALA SEQRES 3 C 141 GLU ALA LEU GLU ARG MET PHE LEU SER PHE PRO THR THR SEQRES 4 C 141 LYS THR TYR PHE PRO HIS PHE ASP LEU SER HIS GLY SER SEQRES 5 C 141 ALA GLN VAL LYS GLY HIS GLY LYS LYS VAL ALA ASP ALA SEQRES 6 C 141 LEU THR ASN ALA VAL ALA HIS VAL ASP ASP MET PRO ASN SEQRES 7 C 141 ALA LEU SER ALA LEU SER ASP LEU HIS ALA HIS LYS LEU SEQRES 8 C 141 ARG VAL ASP PRO VAL ASN PHE LYS LEU LEU SER HIS CYS SEQRES 9 C 141 LEU LEU VAL THR LEU ALA ALA HIS LEU PRO ALA GLU PHE SEQRES 10 C 141 THR PRO ALA VAL HIS ALA SER LEU ASP LYS PHE LEU ALA SEQRES 11 C 141 SER VAL SER THR VAL LEU THR SER LYS TYR ARG SEQRES 1 D 146 VAL HIS LEU THR PRO VAL GLU LYS SER ALA VAL THR ALA SEQRES 2 D 146 LEU TRP GLY LYS VAL ASN VAL ASP GLU VAL GLY GLY GLU SEQRES 3 D 146 ALA LEU GLY ARG LEU LEU VAL VAL TYR PRO TRP THR GLN SEQRES 4 D 146 ARG PHE PHE GLU SER PHE GLY ASP LEU SER THR PRO ASP SEQRES 5 D 146 ALA VAL MET GLY ASN PRO LYS VAL LYS ALA HIS GLY LYS SEQRES 6 D 146 LYS VAL LEU GLY ALA PHE SER ASP GLY LEU ALA HIS LEU SEQRES 7 D 146 ASP ASN LEU LYS GLY THR PHE ALA THR LEU SER GLU LEU SEQRES 8 D 146 HIS CYS ASP LYS LEU HIS VAL ASP PRO GLU ASN PHE ARG SEQRES 9 D 146 LEU LEU GLY ASN VAL LEU VAL CYS VAL LEU ALA HIS HIS SEQRES 10 D 146 PHE GLY LYS GLU PHE THR PRO PRO VAL GLN ALA ALA TYR SEQRES 11 D 146 GLN LYS VAL VAL ALA GLY VAL ALA ASN ALA LEU ALA HIS SEQRES 12 D 146 LYS TYR HIS HET HEM A 201 43 HET CMO A 202 2 HET 7SJ A 203 45 HET HEM B 201 43 HET CMO B 202 2 HET HEM C 201 43 HET CMO C 202 2 HET HEM D 201 43 HET CMO D 202 2 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM CMO CARBON MONOXIDE HETNAM 7SJ 2-METHOXY-5-({2-[1-(PROPAN-2-YL)-1H-PYRAZOL-5- HETNAM 2 7SJ YL]PYRIDIN-3-YL}METHOXY)PYRIDINE-4-CARBALDEHYDE HETSYN HEM HEME FORMUL 5 HEM 4(C34 H32 FE N4 O4) FORMUL 6 CMO 4(C O) FORMUL 7 7SJ C19 H20 N4 O3 FORMUL 14 HOH *55(H2 O) HELIX 1 AA1 SER A 3 LYS A 16 1 14 HELIX 2 AA2 VAL A 17 ALA A 19 5 3 HELIX 3 AA3 HIS A 20 PHE A 36 1 17 HELIX 4 AA4 PRO A 37 PHE A 43 5 7 HELIX 5 AA5 SER A 52 HIS A 72 1 21 HELIX 6 AA6 ASP A 75 LEU A 80 1 6 HELIX 7 AA7 LEU A 80 ALA A 88 1 9 HELIX 8 AA8 ASP A 94 LEU A 113 1 20 HELIX 9 AA9 THR A 118 SER A 138 1 21 HELIX 10 AB1 THR B 4 GLY B 16 1 13 HELIX 11 AB2 GLU B 22 TYR B 35 1 14 HELIX 12 AB3 PRO B 36 GLY B 46 5 11 HELIX 13 AB4 THR B 50 GLY B 56 1 7 HELIX 14 AB5 ASN B 57 ALA B 76 1 20 HELIX 15 AB6 HIS B 77 ASP B 79 5 3 HELIX 16 AB7 ASN B 80 PHE B 85 1 6 HELIX 17 AB8 PHE B 85 ASP B 94 1 10 HELIX 18 AB9 PRO B 100 GLY B 119 1 20 HELIX 19 AC1 LYS B 120 PHE B 122 5 3 HELIX 20 AC2 THR B 123 ALA B 142 1 20 HELIX 21 AC3 HIS B 143 HIS B 146 5 4 HELIX 22 AC4 SER C 3 GLY C 18 1 16 HELIX 23 AC5 HIS C 20 PHE C 36 1 17 HELIX 24 AC6 PRO C 37 PHE C 43 5 7 HELIX 25 AC7 SER C 52 HIS C 72 1 21 HELIX 26 AC8 ASP C 75 LEU C 80 1 6 HELIX 27 AC9 LEU C 80 HIS C 89 1 10 HELIX 28 AD1 ASP C 94 LEU C 113 1 20 HELIX 29 AD2 THR C 118 SER C 138 1 21 HELIX 30 AD3 THR D 4 VAL D 18 1 15 HELIX 31 AD4 GLU D 22 TYR D 35 1 14 HELIX 32 AD5 PRO D 36 GLY D 46 5 11 HELIX 33 AD6 THR D 50 ASN D 57 1 8 HELIX 34 AD7 ASN D 57 HIS D 77 1 21 HELIX 35 AD8 ASN D 80 PHE D 85 1 6 HELIX 36 AD9 PHE D 85 LYS D 95 1 11 HELIX 37 AE1 PRO D 100 GLY D 119 1 20 HELIX 38 AE2 LYS D 120 PHE D 122 5 3 HELIX 39 AE3 THR D 123 ALA D 142 1 20 HELIX 40 AE4 HIS D 143 HIS D 146 5 4 LINK NE2 HIS A 87 FE HEM A 201 1555 1555 2.33 LINK FE HEM A 201 O CMO A 202 1555 1555 2.76 LINK NE2 HIS B 92 FE HEM B 201 1555 1555 2.31 LINK NE2 HIS C 87 FE HEM C 201 1555 1555 2.26 LINK FE HEM C 201 O CMO C 202 1555 1555 2.73 LINK NE2 HIS D 92 FE HEM D 201 1555 1555 2.43 LINK FE HEM D 201 O CMO D 202 1555 1555 2.55 SITE 1 AC1 16 TYR A 42 PHE A 43 HIS A 45 PHE A 46 SITE 2 AC1 16 HIS A 58 LYS A 61 ALA A 65 LEU A 66 SITE 3 AC1 16 LEU A 83 HIS A 87 LEU A 91 ASN A 97 SITE 4 AC1 16 PHE A 98 LEU A 101 LEU A 136 CMO A 202 SITE 1 AC2 3 HIS A 58 VAL A 62 HEM A 201 SITE 1 AC3 9 VAL A 1 LEU A 2 ALA A 130 SER A 131 SITE 2 AC3 9 THR A 134 VAL C 1 SER C 131 VAL C 135 SITE 3 AC3 9 SER C 138 SITE 1 AC4 12 PHE B 41 PHE B 42 HIS B 63 VAL B 67 SITE 2 AC4 12 ALA B 70 PHE B 71 HIS B 92 ASN B 102 SITE 3 AC4 12 PHE B 103 LEU B 106 LEU B 141 CMO B 202 SITE 1 AC5 3 PHE B 42 HIS B 63 HEM B 201 SITE 1 AC6 15 TYR C 42 PHE C 43 HIS C 45 HIS C 58 SITE 2 AC6 15 LYS C 61 VAL C 62 LEU C 86 HIS C 87 SITE 3 AC6 15 LEU C 91 ASN C 97 PHE C 98 LEU C 101 SITE 4 AC6 15 LEU C 136 CMO C 202 HOH C 305 SITE 1 AC7 3 HIS C 58 VAL C 62 HEM C 201 SITE 1 AC8 12 PHE D 41 PHE D 45 HIS D 63 LYS D 66 SITE 2 AC8 12 VAL D 67 HIS D 92 LEU D 96 ASN D 102 SITE 3 AC8 12 PHE D 103 LEU D 106 LEU D 141 CMO D 202 SITE 1 AC9 2 HIS D 63 HEM D 201 CRYST1 57.385 59.040 172.637 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017426 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016938 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005793 0.00000