HEADER IMMUNE SYSTEM 06-DEC-16 5U5F TITLE MEDITOPE ENABLED TRASTUZUMAB I83E VARIANT IN COMPLEX WITH (AC) TITLE 2 CQFDA(PH)2STRRLRCGGSK COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEMAB TRASTUZUMAB FAB LIGHT CHAIN I83E; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: MEMAB TRASTUZUMAB FAB HEAVY CHAIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: PROTEIN L; COMPND 11 CHAIN: E; COMPND 12 ENGINEERED: YES; COMPND 13 MUTATION: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: 5-DIPHENYL LONG MEDITOPE; COMPND 16 CHAIN: D; COMPND 17 ENGINEERED: YES; COMPND 18 MOL_ID: 5; COMPND 19 MOLECULE: IMMUNOGLOBULIN G BINDING PROTEIN A; COMPND 20 CHAIN: C; COMPND 21 ENGINEERED: YES; COMPND 22 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: FINEGOLDIA MAGNA; SOURCE 13 ORGANISM_COMMON: PEPTOSTREPTOCOCCUS MAGNUS; SOURCE 14 ORGANISM_TAXID: 1260; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 MOL_ID: 4; SOURCE 18 SYNTHETIC: YES; SOURCE 19 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 20 ORGANISM_TAXID: 32630; SOURCE 21 MOL_ID: 5; SOURCE 22 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 23 ORGANISM_TAXID: 1280; SOURCE 24 GENE: SPA; SOURCE 25 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 26 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR K.P.BZYMEK,K.N.AVERY,C.ZER,J.C.WILLIAMS REVDAT 5 15-NOV-23 5U5F 1 REMARK REVDAT 4 04-OCT-23 5U5F 1 REMARK REVDAT 3 18-APR-18 5U5F 1 REMARK REVDAT 2 28-MAR-18 5U5F 1 COMPND SOURCE REMARK DBREF REVDAT 2 2 1 SEQADV REVDAT 1 14-MAR-18 5U5F 0 JRNL AUTH K.P.BZYMEK,K.N.AVERY,C.ZER,J.C.WILLIAMS JRNL TITL MEDITOPE ENABLED TRASTUZUMAB I83E VARIANT IN COMPLEX WITH JRNL TITL 2 (AC)CQFDA(PH)2STRRLRCGGSK JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1839 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 60648 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 2938 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.6489 - 4.9887 0.99 2971 147 0.1666 0.1762 REMARK 3 2 4.9887 - 3.9617 1.00 2835 143 0.1228 0.1389 REMARK 3 3 3.9617 - 3.4614 1.00 2796 152 0.1402 0.1593 REMARK 3 4 3.4614 - 3.1452 1.00 2767 151 0.1468 0.1868 REMARK 3 5 3.1452 - 2.9199 1.00 2761 167 0.1601 0.1845 REMARK 3 6 2.9199 - 2.7479 1.00 2781 144 0.1632 0.1770 REMARK 3 7 2.7479 - 2.6103 1.00 2776 115 0.1647 0.1981 REMARK 3 8 2.6103 - 2.4967 1.00 2762 139 0.1662 0.2006 REMARK 3 9 2.4967 - 2.4006 1.00 2740 137 0.1671 0.2076 REMARK 3 10 2.4006 - 2.3178 1.00 2718 151 0.1672 0.2069 REMARK 3 11 2.3178 - 2.2453 1.00 2728 158 0.1616 0.1876 REMARK 3 12 2.2453 - 2.1812 1.00 2747 143 0.1632 0.1820 REMARK 3 13 2.1812 - 2.1238 1.00 2752 134 0.1646 0.2191 REMARK 3 14 2.1238 - 2.0720 1.00 2704 141 0.1769 0.2355 REMARK 3 15 2.0720 - 2.0249 1.00 2749 128 0.1881 0.2498 REMARK 3 16 2.0249 - 1.9818 1.00 2708 140 0.1825 0.2250 REMARK 3 17 1.9818 - 1.9421 1.00 2771 129 0.1940 0.2239 REMARK 3 18 1.9421 - 1.9055 1.00 2714 131 0.1890 0.2202 REMARK 3 19 1.9055 - 1.8715 1.00 2754 133 0.2082 0.2694 REMARK 3 20 1.8715 - 1.8397 1.00 2708 134 0.2341 0.2724 REMARK 3 21 1.8397 - 1.8101 0.91 2468 121 0.2811 0.3022 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4669 REMARK 3 ANGLE : 1.075 6379 REMARK 3 CHIRALITY : 0.046 705 REMARK 3 PLANARITY : 0.005 838 REMARK 3 DIHEDRAL : 13.589 1739 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 26 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.7144 -17.9489 10.2899 REMARK 3 T TENSOR REMARK 3 T11: 0.1375 T22: 0.1328 REMARK 3 T33: 0.1585 T12: 0.0067 REMARK 3 T13: 0.0014 T23: 0.0123 REMARK 3 L TENSOR REMARK 3 L11: 0.6294 L22: 1.2073 REMARK 3 L33: 2.4871 L12: 0.8322 REMARK 3 L13: 0.3382 L23: 0.9795 REMARK 3 S TENSOR REMARK 3 S11: -0.0085 S12: 0.0186 S13: 0.0168 REMARK 3 S21: -0.0457 S22: 0.1373 S23: -0.0060 REMARK 3 S31: -0.2803 S32: 0.0938 S33: -0.0629 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.5338 -24.1701 8.2801 REMARK 3 T TENSOR REMARK 3 T11: 0.0927 T22: 0.1401 REMARK 3 T33: 0.1588 T12: 0.0162 REMARK 3 T13: -0.0049 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 1.1719 L22: 1.1545 REMARK 3 L33: 1.3244 L12: -0.2327 REMARK 3 L13: 0.2991 L23: 0.4865 REMARK 3 S TENSOR REMARK 3 S11: 0.0104 S12: 0.0548 S13: 0.0380 REMARK 3 S21: 0.0182 S22: -0.0001 S23: 0.2207 REMARK 3 S31: -0.1238 S32: -0.1633 S33: -0.0135 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 76 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.0394 -22.5984 15.8488 REMARK 3 T TENSOR REMARK 3 T11: 0.1513 T22: 0.1369 REMARK 3 T33: 0.1416 T12: 0.0144 REMARK 3 T13: 0.0094 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 0.1501 L22: 0.5426 REMARK 3 L33: 1.7032 L12: 0.0032 REMARK 3 L13: 0.0947 L23: 0.6560 REMARK 3 S TENSOR REMARK 3 S11: -0.0540 S12: 0.0127 S13: 0.0476 REMARK 3 S21: 0.0545 S22: 0.0084 S23: 0.1266 REMARK 3 S31: -0.0149 S32: -0.1194 S33: 0.0110 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 114 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7441 -33.2032 48.3967 REMARK 3 T TENSOR REMARK 3 T11: 0.2477 T22: 0.1708 REMARK 3 T33: 0.1607 T12: 0.0630 REMARK 3 T13: -0.0607 T23: -0.0285 REMARK 3 L TENSOR REMARK 3 L11: 1.7714 L22: 2.9583 REMARK 3 L33: 1.8699 L12: -0.4732 REMARK 3 L13: 0.2713 L23: -0.0833 REMARK 3 S TENSOR REMARK 3 S11: 0.0738 S12: -0.0524 S13: -0.3137 REMARK 3 S21: 0.5657 S22: 0.0298 S23: -0.0495 REMARK 3 S31: 0.3616 S32: 0.2012 S33: -0.1463 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 129 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.8940 -21.8758 38.7191 REMARK 3 T TENSOR REMARK 3 T11: 0.1299 T22: 0.1136 REMARK 3 T33: 0.0822 T12: 0.0219 REMARK 3 T13: -0.0078 T23: -0.0408 REMARK 3 L TENSOR REMARK 3 L11: 4.1859 L22: 3.8354 REMARK 3 L33: 2.9807 L12: -3.3610 REMARK 3 L13: 2.0512 L23: -2.0350 REMARK 3 S TENSOR REMARK 3 S11: 0.0721 S12: 0.1539 S13: 0.0665 REMARK 3 S21: -0.0336 S22: -0.0553 S23: -0.1720 REMARK 3 S31: 0.0977 S32: 0.3119 S33: -0.0314 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 151 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.6312 -25.3489 38.9731 REMARK 3 T TENSOR REMARK 3 T11: 0.1563 T22: 0.2734 REMARK 3 T33: 0.1902 T12: 0.0271 REMARK 3 T13: 0.0149 T23: -0.0458 REMARK 3 L TENSOR REMARK 3 L11: 4.4853 L22: 2.5060 REMARK 3 L33: 3.5554 L12: -1.9232 REMARK 3 L13: 2.5651 L23: -1.0633 REMARK 3 S TENSOR REMARK 3 S11: 0.0548 S12: 0.2329 S13: 0.1972 REMARK 3 S21: -0.0095 S22: -0.0228 S23: -0.3146 REMARK 3 S31: -0.0013 S32: 0.6631 S33: 0.0558 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 164 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.5045 -27.3695 39.1933 REMARK 3 T TENSOR REMARK 3 T11: 0.1423 T22: 0.1166 REMARK 3 T33: 0.1125 T12: 0.0201 REMARK 3 T13: -0.0215 T23: -0.0177 REMARK 3 L TENSOR REMARK 3 L11: 3.8641 L22: 4.2294 REMARK 3 L33: 4.2381 L12: -2.9278 REMARK 3 L13: 2.7568 L23: -2.0607 REMARK 3 S TENSOR REMARK 3 S11: 0.1636 S12: 0.0027 S13: -0.2616 REMARK 3 S21: 0.0093 S22: 0.0600 S23: 0.0350 REMARK 3 S31: 0.2471 S32: 0.1841 S33: -0.2387 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 189 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.4541 -20.5576 48.4840 REMARK 3 T TENSOR REMARK 3 T11: 0.1829 T22: 0.1432 REMARK 3 T33: 0.1272 T12: 0.0316 REMARK 3 T13: -0.0569 T23: -0.0293 REMARK 3 L TENSOR REMARK 3 L11: 2.5624 L22: 4.9179 REMARK 3 L33: 3.6299 L12: -2.2309 REMARK 3 L13: 1.8727 L23: -2.1156 REMARK 3 S TENSOR REMARK 3 S11: -0.0757 S12: -0.1744 S13: 0.0115 REMARK 3 S21: 0.4748 S22: 0.2052 S23: -0.3572 REMARK 3 S31: 0.1049 S32: 0.1471 S33: -0.0498 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.4640 -48.2574 17.9883 REMARK 3 T TENSOR REMARK 3 T11: 0.1490 T22: 0.0901 REMARK 3 T33: 0.1036 T12: -0.0072 REMARK 3 T13: 0.0199 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 3.8789 L22: 2.2065 REMARK 3 L33: 2.4574 L12: -0.7189 REMARK 3 L13: 1.6780 L23: -0.4603 REMARK 3 S TENSOR REMARK 3 S11: -0.3408 S12: -0.4865 S13: 0.0056 REMARK 3 S21: 0.3817 S22: 0.3370 S23: 0.0825 REMARK 3 S31: 0.0393 S32: -0.1873 S33: 0.0370 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 18 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.5633 -48.8276 11.3386 REMARK 3 T TENSOR REMARK 3 T11: 0.1184 T22: 0.1156 REMARK 3 T33: 0.2085 T12: -0.0301 REMARK 3 T13: -0.0018 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 6.2864 L22: 3.3569 REMARK 3 L33: 2.7274 L12: -3.8210 REMARK 3 L13: 0.7328 L23: -2.0793 REMARK 3 S TENSOR REMARK 3 S11: 0.0737 S12: 0.0585 S13: -0.2654 REMARK 3 S21: -0.0260 S22: 0.1214 S23: 0.4132 REMARK 3 S31: 0.1504 S32: -0.3443 S33: -0.2109 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 33 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.2198 -40.4281 7.6260 REMARK 3 T TENSOR REMARK 3 T11: 0.0980 T22: 0.1041 REMARK 3 T33: 0.0986 T12: 0.0390 REMARK 3 T13: -0.0098 T23: 0.0167 REMARK 3 L TENSOR REMARK 3 L11: 3.0427 L22: 4.7592 REMARK 3 L33: 4.5956 L12: 2.3213 REMARK 3 L13: 2.1753 L23: 3.0442 REMARK 3 S TENSOR REMARK 3 S11: -0.0025 S12: 0.1978 S13: -0.0111 REMARK 3 S21: -0.2187 S22: 0.1076 S23: -0.0853 REMARK 3 S31: -0.1166 S32: 0.0233 S33: -0.0993 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 53 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.3865 -47.2362 0.0298 REMARK 3 T TENSOR REMARK 3 T11: 0.1627 T22: 0.1428 REMARK 3 T33: 0.1038 T12: 0.0589 REMARK 3 T13: -0.0001 T23: -0.0213 REMARK 3 L TENSOR REMARK 3 L11: 7.3044 L22: 1.8348 REMARK 3 L33: 3.3272 L12: 0.3060 REMARK 3 L13: 1.9239 L23: -0.4818 REMARK 3 S TENSOR REMARK 3 S11: 0.1952 S12: 0.6537 S13: -0.0543 REMARK 3 S21: -0.2272 S22: -0.1363 S23: 0.0583 REMARK 3 S31: 0.2048 S32: 0.3190 S33: -0.0616 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 68 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.7785 -51.0491 10.2984 REMARK 3 T TENSOR REMARK 3 T11: 0.1165 T22: 0.0652 REMARK 3 T33: 0.0959 T12: 0.0210 REMARK 3 T13: 0.0063 T23: -0.0022 REMARK 3 L TENSOR REMARK 3 L11: 1.3310 L22: 2.9720 REMARK 3 L33: 3.0658 L12: -1.4796 REMARK 3 L13: 0.9198 L23: 0.7714 REMARK 3 S TENSOR REMARK 3 S11: 0.0962 S12: 0.1583 S13: -0.2204 REMARK 3 S21: -0.0298 S22: 0.0725 S23: 0.0783 REMARK 3 S31: 0.1375 S32: 0.0168 S33: -0.1663 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 92 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.0627 -38.0337 9.5498 REMARK 3 T TENSOR REMARK 3 T11: 0.1025 T22: 0.1702 REMARK 3 T33: 0.1950 T12: 0.0060 REMARK 3 T13: 0.0211 T23: 0.0209 REMARK 3 L TENSOR REMARK 3 L11: 5.9523 L22: 3.6325 REMARK 3 L33: 3.8420 L12: -1.5225 REMARK 3 L13: 1.5824 L23: -0.1261 REMARK 3 S TENSOR REMARK 3 S11: 0.0320 S12: 0.4347 S13: 0.2450 REMARK 3 S21: -0.0503 S22: -0.0684 S23: 0.4538 REMARK 3 S31: -0.0927 S32: -0.4296 S33: 0.0407 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 111 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6762 -46.3544 24.4642 REMARK 3 T TENSOR REMARK 3 T11: 0.1947 T22: 0.1020 REMARK 3 T33: 0.1452 T12: 0.0339 REMARK 3 T13: -0.0462 T23: -0.0325 REMARK 3 L TENSOR REMARK 3 L11: 0.5262 L22: 1.2509 REMARK 3 L33: 3.6796 L12: 0.2454 REMARK 3 L13: -1.0047 L23: 0.9427 REMARK 3 S TENSOR REMARK 3 S11: 0.0938 S12: -0.0094 S13: -0.1082 REMARK 3 S21: 0.3107 S22: 0.0729 S23: -0.1745 REMARK 3 S31: 0.2963 S32: 0.4165 S33: -0.1709 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 127 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.0763 -33.9130 40.5573 REMARK 3 T TENSOR REMARK 3 T11: 0.1520 T22: 0.0837 REMARK 3 T33: 0.1012 T12: 0.0050 REMARK 3 T13: 0.0069 T23: -0.0027 REMARK 3 L TENSOR REMARK 3 L11: 0.9503 L22: 2.7392 REMARK 3 L33: 3.2369 L12: -0.8358 REMARK 3 L13: -0.4896 L23: 1.8158 REMARK 3 S TENSOR REMARK 3 S11: 0.0581 S12: 0.0223 S13: -0.0172 REMARK 3 S21: 0.1113 S22: 0.0012 S23: -0.0395 REMARK 3 S31: 0.2293 S32: 0.0424 S33: -0.0518 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 196 THROUGH 223 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.9397 -41.0680 45.5618 REMARK 3 T TENSOR REMARK 3 T11: 0.3218 T22: 0.1317 REMARK 3 T33: 0.1380 T12: 0.0013 REMARK 3 T13: 0.0313 T23: 0.0197 REMARK 3 L TENSOR REMARK 3 L11: 2.9236 L22: 2.6323 REMARK 3 L33: 5.0515 L12: -1.3844 REMARK 3 L13: -2.4388 L23: 1.1152 REMARK 3 S TENSOR REMARK 3 S11: -0.2155 S12: -0.1951 S13: -0.2339 REMARK 3 S21: 0.8111 S22: 0.1254 S23: 0.2273 REMARK 3 S31: 0.9272 S32: 0.1253 S33: 0.0120 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 19 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.8220 -8.8563 15.1514 REMARK 3 T TENSOR REMARK 3 T11: 0.1959 T22: 0.1759 REMARK 3 T33: 0.3664 T12: -0.0567 REMARK 3 T13: 0.0236 T23: -0.0395 REMARK 3 L TENSOR REMARK 3 L11: 7.7764 L22: 3.8709 REMARK 3 L33: 4.8434 L12: -5.4179 REMARK 3 L13: -1.7987 L23: 1.0093 REMARK 3 S TENSOR REMARK 3 S11: 0.0737 S12: -0.3450 S13: 0.1701 REMARK 3 S21: 0.2394 S22: 0.1590 S23: -0.0654 REMARK 3 S31: -0.3248 S32: 0.4571 S33: -0.2238 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 34 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3020 -11.3626 8.3571 REMARK 3 T TENSOR REMARK 3 T11: 0.1263 T22: 0.1355 REMARK 3 T33: 0.1487 T12: -0.0488 REMARK 3 T13: -0.0016 T23: 0.0343 REMARK 3 L TENSOR REMARK 3 L11: 7.2590 L22: 4.6396 REMARK 3 L33: 4.2153 L12: -1.4672 REMARK 3 L13: -2.0507 L23: 0.0667 REMARK 3 S TENSOR REMARK 3 S11: 0.0345 S12: 0.4305 S13: 0.2723 REMARK 3 S21: -0.2717 S22: -0.0751 S23: -0.0817 REMARK 3 S31: -0.1154 S32: 0.2368 S33: 0.0552 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 62 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0795 -1.5765 10.1321 REMARK 3 T TENSOR REMARK 3 T11: 0.4476 T22: 0.4061 REMARK 3 T33: 0.5062 T12: -0.1606 REMARK 3 T13: 0.0468 T23: 0.1834 REMARK 3 L TENSOR REMARK 3 L11: 5.2297 L22: 1.8229 REMARK 3 L33: 4.7549 L12: -2.3563 REMARK 3 L13: 0.2540 L23: -0.0717 REMARK 3 S TENSOR REMARK 3 S11: -0.0158 S12: -0.0851 S13: 0.6363 REMARK 3 S21: 0.1959 S22: 0.0243 S23: -0.3664 REMARK 3 S31: -0.7167 S32: 0.9818 S33: 0.1429 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 73 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.7423 -3.4904 12.4761 REMARK 3 T TENSOR REMARK 3 T11: 0.3225 T22: 0.1606 REMARK 3 T33: 0.3664 T12: -0.0820 REMARK 3 T13: 0.0986 T23: 0.0377 REMARK 3 L TENSOR REMARK 3 L11: 4.5636 L22: 5.0115 REMARK 3 L33: 4.5890 L12: -4.0685 REMARK 3 L13: 1.2212 L23: -1.0444 REMARK 3 S TENSOR REMARK 3 S11: 0.2900 S12: -0.1549 S13: 0.5681 REMARK 3 S21: 0.0105 S22: 0.0917 S23: 0.0320 REMARK 3 S31: -0.4241 S32: 0.2151 S33: -0.3058 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 8 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.0397 -32.4471 21.5572 REMARK 3 T TENSOR REMARK 3 T11: 0.2254 T22: 0.1065 REMARK 3 T33: 0.1246 T12: 0.0251 REMARK 3 T13: -0.0367 T23: -0.0179 REMARK 3 L TENSOR REMARK 3 L11: 0.2135 L22: 7.5599 REMARK 3 L33: 5.9027 L12: -0.0998 REMARK 3 L13: -0.3640 L23: -6.1659 REMARK 3 S TENSOR REMARK 3 S11: -0.0960 S12: -0.3068 S13: 0.0396 REMARK 3 S21: 0.2473 S22: 0.0144 S23: -0.3345 REMARK 3 S31: -0.0053 S32: 0.2569 S33: 0.2311 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 9 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.0137 -25.2989 21.5086 REMARK 3 T TENSOR REMARK 3 T11: 0.2745 T22: 0.1768 REMARK 3 T33: 0.2237 T12: -0.0271 REMARK 3 T13: -0.0738 T23: -0.0085 REMARK 3 L TENSOR REMARK 3 L11: 5.3117 L22: 7.9079 REMARK 3 L33: 3.6439 L12: 0.4608 REMARK 3 L13: -2.2278 L23: -3.6366 REMARK 3 S TENSOR REMARK 3 S11: 0.1782 S12: -0.3402 S13: 0.4034 REMARK 3 S21: 0.6599 S22: -0.2488 S23: -0.8059 REMARK 3 S31: -0.7514 S32: 0.6714 S33: 0.0335 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.3830 -66.5340 -2.0954 REMARK 3 T TENSOR REMARK 3 T11: 0.2548 T22: 0.2788 REMARK 3 T33: 0.2058 T12: 0.0151 REMARK 3 T13: -0.0242 T23: -0.0706 REMARK 3 L TENSOR REMARK 3 L11: 3.6619 L22: 5.0124 REMARK 3 L33: 8.5553 L12: -0.3079 REMARK 3 L13: 5.6132 L23: -0.7228 REMARK 3 S TENSOR REMARK 3 S11: 0.2821 S12: 0.4636 S13: -0.1658 REMARK 3 S21: -0.6395 S22: -0.2914 S23: 0.5560 REMARK 3 S31: 0.1940 S32: -0.4878 S33: 0.0439 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 17 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0439 -61.2929 7.5682 REMARK 3 T TENSOR REMARK 3 T11: 0.1546 T22: 0.0862 REMARK 3 T33: 0.1286 T12: 0.0005 REMARK 3 T13: -0.0026 T23: -0.0321 REMARK 3 L TENSOR REMARK 3 L11: 4.5007 L22: 3.2584 REMARK 3 L33: 1.9270 L12: -3.6720 REMARK 3 L13: 0.7521 L23: -0.8655 REMARK 3 S TENSOR REMARK 3 S11: 0.0782 S12: 0.0410 S13: -0.1432 REMARK 3 S21: -0.2422 S22: -0.0493 S23: 0.1056 REMARK 3 S31: 0.0008 S32: -0.0551 S33: -0.0345 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 36 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4847 -56.3054 1.6572 REMARK 3 T TENSOR REMARK 3 T11: 0.2541 T22: 0.1706 REMARK 3 T33: 0.1298 T12: 0.0604 REMARK 3 T13: 0.0615 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 7.7045 L22: 4.0599 REMARK 3 L33: 7.9376 L12: -2.1727 REMARK 3 L13: 6.5776 L23: -1.5077 REMARK 3 S TENSOR REMARK 3 S11: 0.4174 S12: 0.5360 S13: 0.2129 REMARK 3 S21: -0.6690 S22: -0.4101 S23: -0.3461 REMARK 3 S31: -0.0596 S32: 0.0678 S33: 0.0391 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5U5F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1000225362. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60655 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.810 REMARK 200 RESOLUTION RANGE LOW (A) : 33.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.81 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.78400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.660 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4IOI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM TRIS, PH 7.2, 50 MM NACL, 20% REMARK 280 PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.71500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.50000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.69000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.50000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.71500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.69000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E, D, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER E 17 REMARK 465 GLY E 18 REMARK 465 ACE D 0 REMARK 465 GLY D 14 REMARK 465 SER D 15 REMARK 465 LYS D 16 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 1 CG CD OE1 OE2 REMARK 470 LYS E 78 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 570 O HOH B 642 1.87 REMARK 500 O HOH C 148 O HOH C 154 1.90 REMARK 500 NH1 ARG B 50 O HOH B 401 1.90 REMARK 500 O HOH B 662 O HOH B 711 1.91 REMARK 500 O HOH A 495 O HOH A 498 2.02 REMARK 500 O HOH A 538 O HOH A 576 2.02 REMARK 500 O LYS A 169 O HOH A 301 2.03 REMARK 500 O HOH E 155 O HOH E 158 2.03 REMARK 500 OE1 GLU A 195 O HOH A 302 2.03 REMARK 500 O HOH E 126 O HOH E 158 2.04 REMARK 500 O HOH A 507 O HOH A 571 2.04 REMARK 500 O HOH B 589 O HOH B 652 2.06 REMARK 500 O HOH A 429 O HOH A 568 2.07 REMARK 500 O HOH A 530 O HOH A 572 2.08 REMARK 500 O HOH A 339 O HOH B 626 2.10 REMARK 500 OE1 GLU C 13 O HOH C 101 2.14 REMARK 500 O HOH A 304 O HOH A 456 2.14 REMARK 500 O HOH C 147 O HOH C 160 2.17 REMARK 500 OE1 GLU A 213 O HOH A 303 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 602 O HOH A 611 4445 1.87 REMARK 500 O HOH A 549 O HOH E 120 4445 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 30 -129.83 55.49 REMARK 500 ALA A 51 -38.33 71.84 REMARK 500 SER A 77 88.89 -153.47 REMARK 500 ALA A 84 175.85 178.77 REMARK 500 ASP B 151 61.14 66.77 REMARK 500 ASP B 151 61.14 66.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 614 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A 615 DISTANCE = 5.95 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MRY B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5U3D RELATED DB: PDB REMARK 900 RELATED ID: 5U5M RELATED DB: PDB REMARK 900 RELATED ID: 5U6A RELATED DB: PDB DBREF 5U5F A 1 214 PDB 5U5F 5U5F 1 214 DBREF 5U5F B 1 223 PDB 5U5F 5U5F 1 223 DBREF 5U5F E 21 81 UNP Q51918 Q51918_FINMA 477 537 DBREF 5U5F D 0 16 PDB 5U5F 5U5F 0 16 DBREF 5U5F C 4 54 UNP Q2UW42 Q2UW42_STAAU 74 124 SEQADV 5U5F SER E 17 UNP Q51918 EXPRESSION TAG SEQADV 5U5F GLY E 18 UNP Q51918 EXPRESSION TAG SEQADV 5U5F SER E 19 UNP Q51918 EXPRESSION TAG SEQADV 5U5F GLU E 20 UNP Q51918 EXPRESSION TAG SEQADV 5U5F ILE E 34 UNP Q51918 THR 490 ENGINEERED MUTATION SEQADV 5U5F ALA E 55 UNP Q51918 ASP 511 ENGINEERED MUTATION SEQADV 5U5F ASN E 73 UNP Q51918 TYR 529 ENGINEERED MUTATION SEQADV 5U5F HIS E 74 UNP Q51918 THR 530 ENGINEERED MUTATION SEQADV 5U5F MET E 75 UNP Q51918 ILE 531 ENGINEERED MUTATION SEQADV 5U5F GLY C 1 UNP Q2UW42 EXPRESSION TAG SEQADV 5U5F SER C 2 UNP Q2UW42 EXPRESSION TAG SEQADV 5U5F TYR C 3 UNP Q2UW42 EXPRESSION TAG SEQRES 1 A 214 ASP ILE GLN MET THR GLN SER PRO ILE LEU LEU SER ALA SEQRES 2 A 214 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 A 214 GLN ASP VAL ASN THR ALA VAL ALA TRP TYR GLN GLN ARG SEQRES 4 A 214 THR ASN GLY SER PRO ARG LEU LEU ILE TYR SER ALA SER SEQRES 5 A 214 PHE LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 A 214 ARG SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 A 214 GLN PRO GLU ASP GLU ALA ASP TYR TYR CYS GLN GLN HIS SEQRES 8 A 214 TYR THR THR PRO PRO THR PHE GLY ALA GLY THR LYS VAL SEQRES 9 A 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 A 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 A 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 A 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 A 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 A 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 A 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 A 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 A 214 PHE ASN ARG GLY GLU CYS SEQRES 1 B 223 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 B 223 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 B 223 PHE ASN ILE LYS ASP THR TYR ILE HIS TRP VAL ARG GLN SEQRES 4 B 223 SER PRO GLY LYS GLY LEU GLU TRP VAL ALA ARG ILE TYR SEQRES 5 B 223 PRO THR ASN GLY TYR THR ARG TYR ALA ASP SER VAL LYS SEQRES 6 B 223 GLY ARG PHE THR ILE SER ALA ASP THR SER LYS ASN THR SEQRES 7 B 223 ALA TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 B 223 ALA ILE TYR TYR CYS SER ARG TRP GLY GLY ASP GLY PHE SEQRES 9 B 223 TYR ALA MET ASP TYR TRP GLY GLN GLY THR LEU VAL THR SEQRES 10 B 223 VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO SEQRES 11 B 223 LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA SEQRES 12 B 223 ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO SEQRES 13 B 223 VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY SEQRES 14 B 223 VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU SEQRES 15 B 223 TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SER SEQRES 16 B 223 LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS SEQRES 17 B 223 PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SEQRES 18 B 223 SER CYS SEQRES 1 E 65 SER GLY SER GLU VAL THR ILE LYS VAL ASN LEU ILE PHE SEQRES 2 E 65 ALA ASP GLY LYS ILE GLN THR ALA GLU PHE LYS GLY THR SEQRES 3 E 65 PHE GLU GLU ALA THR ALA GLU ALA TYR ARG TYR ALA ALA SEQRES 4 E 65 LEU LEU ALA LYS VAL ASN GLY GLU TYR THR ALA ASP LEU SEQRES 5 E 65 GLU ASP GLY GLY ASN HIS MET ASN ILE LYS PHE ALA GLY SEQRES 1 D 17 ACE CYS GLN PHE ASP 2GX SER THR ARG ARG LEU ARG CYS SEQRES 2 D 17 GLY GLY SER LYS SEQRES 1 C 54 GLY SER TYR ASN LYS ASP GLN GLN SER ALA PHE TYR GLU SEQRES 2 C 54 ILE LEU ASN MET PRO ASN LEU ASN GLU ALA GLN ARG ASN SEQRES 3 C 54 GLY PHE ILE GLN SER LEU LYS ASP ASP PRO SER GLN SER SEQRES 4 C 54 THR ASN VAL LEU GLY GLU ALA LYS LYS LEU ASN GLU SER SEQRES 5 C 54 GLN ALA HET 2GX D 5 17 HET MRY B 301 8 HETNAM 2GX BETA-PHENYL-L-PHENYLALANINE HETNAM MRY MESO-ERYTHRITOL FORMUL 4 2GX C15 H15 N O2 FORMUL 6 MRY C4 H10 O4 FORMUL 7 HOH *798(H2 O) HELIX 1 AA1 GLN A 79 GLU A 83 5 5 HELIX 2 AA2 SER A 121 LYS A 126 1 6 HELIX 3 AA3 LYS A 183 HIS A 189 1 7 HELIX 4 AA4 ASN B 28 THR B 32 5 5 HELIX 5 AA5 THR B 74 LYS B 76 5 3 HELIX 6 AA6 ARG B 87 THR B 91 5 5 HELIX 7 AA7 GLY B 101 PHE B 104 5 4 HELIX 8 AA8 SER B 163 ALA B 165 5 3 HELIX 9 AA9 SER B 194 LEU B 196 5 3 HELIX 10 AB1 LYS B 208 ASN B 211 5 4 HELIX 11 AB2 THR E 42 GLY E 62 1 21 HELIX 12 AB3 ASP E 70 GLY E 72 5 3 HELIX 13 AB4 ASN C 4 MET C 17 1 14 HELIX 14 AB5 ASN C 21 ASP C 35 1 15 HELIX 15 AB6 GLN C 38 GLN C 53 1 16 SHEET 1 AA1 4 MET A 4 SER A 7 0 SHEET 2 AA1 4 VAL A 19 ALA A 25 -1 O ARG A 24 N THR A 5 SHEET 3 AA1 4 ASP A 70 ILE A 75 -1 O PHE A 71 N CYS A 23 SHEET 4 AA1 4 PHE A 62 SER A 67 -1 N SER A 67 O ASP A 70 SHEET 1 AA2 5 PHE A 53 LEU A 54 0 SHEET 2 AA2 5 ARG A 45 TYR A 49 -1 N TYR A 49 O PHE A 53 SHEET 3 AA2 5 VAL A 33 GLN A 38 -1 N TRP A 35 O LEU A 47 SHEET 4 AA2 5 ALA A 84 GLN A 90 -1 O TYR A 87 N TYR A 36 SHEET 5 AA2 5 THR A 97 PHE A 98 -1 O THR A 97 N GLN A 90 SHEET 1 AA310 PHE A 53 LEU A 54 0 SHEET 2 AA310 ARG A 45 TYR A 49 -1 N TYR A 49 O PHE A 53 SHEET 3 AA310 VAL A 33 GLN A 38 -1 N TRP A 35 O LEU A 47 SHEET 4 AA310 ALA A 84 GLN A 90 -1 O TYR A 87 N TYR A 36 SHEET 5 AA310 THR A 102 LYS A 107 -1 O VAL A 104 N ALA A 84 SHEET 6 AA310 LEU A 10 SER A 14 1 N LEU A 11 O GLU A 105 SHEET 7 AA310 ILE E 34 GLY E 41 -1 O THR E 36 N SER A 12 SHEET 8 AA310 VAL E 21 ILE E 28 -1 N LEU E 27 O GLN E 35 SHEET 9 AA310 HIS E 74 PHE E 79 1 O ILE E 77 N ASN E 26 SHEET 10 AA310 TYR E 64 GLU E 69 -1 N GLU E 69 O HIS E 74 SHEET 1 AA4 4 SER A 114 PHE A 118 0 SHEET 2 AA4 4 THR A 129 PHE A 139 -1 O LEU A 135 N PHE A 116 SHEET 3 AA4 4 TYR A 173 SER A 182 -1 O SER A 177 N CYS A 134 SHEET 4 AA4 4 SER A 159 VAL A 163 -1 N GLN A 160 O THR A 178 SHEET 1 AA5 4 ALA A 153 LEU A 154 0 SHEET 2 AA5 4 LYS A 145 VAL A 150 -1 N VAL A 150 O ALA A 153 SHEET 3 AA5 4 VAL A 191 THR A 197 -1 O GLU A 195 N GLN A 147 SHEET 4 AA5 4 VAL A 205 ASN A 210 -1 O VAL A 205 N VAL A 196 SHEET 1 AA6 4 GLN B 3 SER B 7 0 SHEET 2 AA6 4 LEU B 18 SER B 25 -1 O ALA B 23 N VAL B 5 SHEET 3 AA6 4 THR B 78 MET B 83 -1 O MET B 83 N LEU B 18 SHEET 4 AA6 4 PHE B 68 ASP B 73 -1 N ASP B 73 O THR B 78 SHEET 1 AA7 6 LEU B 11 VAL B 12 0 SHEET 2 AA7 6 THR B 114 VAL B 118 1 O THR B 117 N VAL B 12 SHEET 3 AA7 6 ALA B 92 TRP B 99 -1 N TYR B 94 O THR B 114 SHEET 4 AA7 6 TYR B 33 SER B 40 -1 N VAL B 37 O TYR B 95 SHEET 5 AA7 6 GLY B 44 ILE B 51 -1 O GLU B 46 N ARG B 38 SHEET 6 AA7 6 THR B 58 TYR B 60 -1 O ARG B 59 N ARG B 50 SHEET 1 AA8 4 LEU B 11 VAL B 12 0 SHEET 2 AA8 4 THR B 114 VAL B 118 1 O THR B 117 N VAL B 12 SHEET 3 AA8 4 ALA B 92 TRP B 99 -1 N TYR B 94 O THR B 114 SHEET 4 AA8 4 MET B 107 TRP B 110 -1 O TYR B 109 N ARG B 98 SHEET 1 AA9 4 SER B 127 LEU B 131 0 SHEET 2 AA9 4 THR B 142 TYR B 152 -1 O GLY B 146 N LEU B 131 SHEET 3 AA9 4 TYR B 183 PRO B 192 -1 O LEU B 185 N VAL B 149 SHEET 4 AA9 4 VAL B 170 THR B 172 -1 N HIS B 171 O VAL B 188 SHEET 1 AB1 4 THR B 138 SER B 139 0 SHEET 2 AB1 4 THR B 142 TYR B 152 -1 O THR B 142 N SER B 139 SHEET 3 AB1 4 TYR B 183 PRO B 192 -1 O LEU B 185 N VAL B 149 SHEET 4 AB1 4 VAL B 176 LEU B 177 -1 N VAL B 176 O SER B 184 SHEET 1 AB2 3 THR B 158 TRP B 161 0 SHEET 2 AB2 3 ILE B 202 HIS B 207 -1 O ASN B 204 N SER B 160 SHEET 3 AB2 3 THR B 212 LYS B 217 -1 O VAL B 214 N VAL B 205 SHEET 1 AB3 2 GLN D 2 ASP D 4 0 SHEET 2 AB3 2 ARG D 9 ARG D 11 -1 O ARG D 11 N GLN D 2 SSBOND 1 CYS A 23 CYS A 88 1555 1555 2.07 SSBOND 2 CYS A 134 CYS A 194 1555 1555 2.01 SSBOND 3 CYS A 214 CYS B 223 1555 1555 2.02 SSBOND 4 CYS B 22 CYS B 96 1555 1555 2.05 SSBOND 5 CYS B 147 CYS B 203 1555 1555 2.04 SSBOND 6 CYS D 1 CYS D 12 1555 1555 2.03 LINK C ASP D 4 N 2GX D 5 1555 1555 1.33 LINK C 2GX D 5 N SER D 6 1555 1555 1.33 CISPEP 1 SER A 7 PRO A 8 0 -13.88 CISPEP 2 SER A 7 PRO A 8 0 -3.43 CISPEP 3 THR A 94 PRO A 95 0 0.21 CISPEP 4 TYR A 140 PRO A 141 0 2.21 CISPEP 5 PHE B 153 PRO B 154 0 -6.58 CISPEP 6 GLU B 155 PRO B 156 0 1.90 SITE 1 AC1 7 GLU B 155 PRO B 156 VAL B 157 ALA B 175 SITE 2 AC1 7 LEU B 185 HOH B 513 SER D 6 CRYST1 53.430 105.380 117.000 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018716 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009489 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008547 0.00000