HEADER LYASE,METAL BINDING PROTEIN 12-DEC-16 5U7A TITLE CRYSTAL STRUCTURE OF A COMPLEX FORMED BETWEEN MERB AND DIMETHYLTIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALKYLMERCURY LYASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ORGANOMERCURIAL LYASE; COMPND 5 EC: 4.99.1.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: MERB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS BACTERIAL PROTEINS, CYSTEINE, ESCHERICHIA COLI, LYASES, MERCURY, KEYWDS 2 DIMETHYLTIN, LYASE, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.M.WAHBA,M.STEVENSON,A.MANSOUR,J.SYGUSCH,D.E.WILCOX,J.G.OMICHINSKI REVDAT 3 06-MAR-24 5U7A 1 REMARK REVDAT 2 25-JAN-17 5U7A 1 JRNL REVDAT 1 11-JAN-17 5U7A 0 JRNL AUTH H.M.WAHBA,M.J.STEVENSON,A.MANSOUR,J.SYGUSCH,D.E.WILCOX, JRNL AUTH 2 J.G.OMICHINSKI JRNL TITL STRUCTURAL AND BIOCHEMICAL CHARACTERIZATION OF ORGANOTIN AND JRNL TITL 2 ORGANOLEAD COMPOUNDS BINDING TO THE ORGANOMERCURIAL LYASE JRNL TITL 3 MERB PROVIDE NEW INSIGHTS INTO ITS MECHANISM OF CARBON-METAL JRNL TITL 4 BOND CLEAVAGE. JRNL REF J. AM. CHEM. SOC. V. 139 910 2017 JRNL REFN ESSN 1520-5126 JRNL PMID 27989130 JRNL DOI 10.1021/JACS.6B11327 REMARK 2 REMARK 2 RESOLUTION. 1.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.920 REMARK 3 COMPLETENESS FOR RANGE (%) : 73.7 REMARK 3 NUMBER OF REFLECTIONS : 43607 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.610 REMARK 3 FREE R VALUE TEST SET COUNT : 3381 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.9984 - 4.4169 0.96 3791 181 0.1599 0.1996 REMARK 3 2 4.4169 - 3.5063 0.93 3691 178 0.1471 0.1907 REMARK 3 3 3.5063 - 3.0632 0.92 3655 174 0.1673 0.1843 REMARK 3 4 3.0632 - 2.7832 0.92 3610 173 0.1837 0.2415 REMARK 3 5 2.7832 - 2.5837 0.90 3592 171 0.1713 0.2030 REMARK 3 6 2.5837 - 2.4314 0.90 3560 168 0.1753 0.2311 REMARK 3 7 2.4314 - 2.3096 0.90 3559 170 0.1670 0.2009 REMARK 3 8 2.3096 - 2.2091 0.89 3503 170 0.1682 0.2026 REMARK 3 9 2.2091 - 2.1240 0.88 3478 167 0.1728 0.2253 REMARK 3 10 2.1240 - 2.0508 0.88 3468 169 0.1655 0.2053 REMARK 3 11 2.0508 - 1.9866 0.88 3474 170 0.1669 0.2024 REMARK 3 12 1.9866 - 1.9298 0.87 3442 160 0.1813 0.2031 REMARK 3 13 1.9298 - 1.8790 0.87 3450 171 0.1865 0.2159 REMARK 3 14 1.8790 - 1.8332 0.85 3349 161 0.1936 0.2172 REMARK 3 15 1.8332 - 1.7915 0.84 3356 156 0.2023 0.2388 REMARK 3 16 1.7915 - 1.7534 0.82 3263 155 0.2074 0.2016 REMARK 3 17 1.7534 - 1.7183 0.78 3040 147 0.2151 0.2623 REMARK 3 18 1.7183 - 1.6859 0.64 2595 129 0.2289 0.2664 REMARK 3 19 1.6859 - 1.6558 0.56 2164 109 0.2308 0.2639 REMARK 3 20 1.6558 - 1.6277 0.48 1920 102 0.2450 0.3001 REMARK 3 21 1.6277 - 1.6015 0.40 1580 75 0.2594 0.3221 REMARK 3 22 1.6015 - 1.5768 0.31 1207 63 0.2802 0.2906 REMARK 3 23 1.5768 - 1.5536 0.22 889 43 0.3046 0.2916 REMARK 3 24 1.5536 - 1.5317 0.10 377 19 0.2908 0.4366 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3248 REMARK 3 ANGLE : 1.346 4430 REMARK 3 CHIRALITY : 0.052 524 REMARK 3 PLANARITY : 0.008 568 REMARK 3 DIHEDRAL : 15.738 1158 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 9.2367 -3.6340 33.4330 REMARK 3 T TENSOR REMARK 3 T11: 0.1510 T22: 0.1281 REMARK 3 T33: 0.1124 T12: -0.0230 REMARK 3 T13: 0.0254 T23: -0.0081 REMARK 3 L TENSOR REMARK 3 L11: 0.5311 L22: 1.1836 REMARK 3 L33: 0.4729 L12: -0.1648 REMARK 3 L13: -0.0079 L23: 0.2749 REMARK 3 S TENSOR REMARK 3 S11: 0.0048 S12: -0.0260 S13: -0.0398 REMARK 3 S21: 0.1399 S22: -0.0596 S23: 0.0861 REMARK 3 S31: 0.0950 S32: -0.0564 S33: -0.0041 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -0.9905 -8.2027 9.7275 REMARK 3 T TENSOR REMARK 3 T11: 0.1204 T22: 0.1651 REMARK 3 T33: 0.1092 T12: 0.0272 REMARK 3 T13: -0.0142 T23: 0.0142 REMARK 3 L TENSOR REMARK 3 L11: 0.7412 L22: 1.5411 REMARK 3 L33: 0.4756 L12: -0.4070 REMARK 3 L13: -0.0804 L23: -0.2423 REMARK 3 S TENSOR REMARK 3 S11: 0.1032 S12: 0.1454 S13: 0.0007 REMARK 3 S21: -0.1638 S22: -0.1272 S23: -0.0490 REMARK 3 S31: 0.0307 S32: 0.0154 S33: -0.0015 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5U7A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1000225428. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.10 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43607 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.530 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.5 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.4500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 23 % POLYETHYLENE GLYCOL 2000 MME, 0.2 REMARK 280 M SODIUM ACETATE PH 5.5, 0.2 M POTASSIUM BROMIDE. BEFORE FLASH REMARK 280 FREEZING, THE SAME PRECIPITANT WAS USED EXCEPT 25% POLYETHYLENE REMARK 280 GLYCOL 2000 MME WAS USED AS A CRYO-PROTECTANT., VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 44.32400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 209 REMARK 465 ARG A 210 REMARK 465 THR A 211 REMARK 465 PRO A 212 REMARK 465 SER B 209 REMARK 465 ARG B 210 REMARK 465 THR B 211 REMARK 465 PRO B 212 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE ARG A 39 O HOH A 403 1.30 REMARK 500 OD2 ASP A 173 HZ3 LYS B 177 1.40 REMARK 500 HH22 ARG B 112 O HOH B 402 1.49 REMARK 500 O ARG B 16 H ASN B 18 1.53 REMARK 500 SN1 ZN5 B 301 O HOH B 407 1.94 REMARK 500 OD2 ASP A 173 NZ LYS B 177 1.96 REMARK 500 O ALA A 21 O HOH A 401 1.96 REMARK 500 SN1 ZN5 B 301 O HOH B 488 2.01 REMARK 500 OD2 ASP A 89 O HOH A 402 2.03 REMARK 500 O HOH B 456 O HOH B 501 2.06 REMARK 500 O ALA B 50 O HOH B 401 2.07 REMARK 500 O HOH A 457 O HOH A 545 2.08 REMARK 500 SN1 ZN5 B 301 O HOH B 499 2.10 REMARK 500 O HOH B 462 O HOH B 507 2.12 REMARK 500 O HOH B 445 O HOH B 467 2.14 REMARK 500 NE ARG A 39 O HOH A 403 2.14 REMARK 500 OG SER A 131 O HOH A 404 2.14 REMARK 500 NH2 ARG B 112 O HOH B 402 2.19 REMARK 500 O HOH A 471 O HOH A 526 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 519 O HOH B 405 1656 2.00 REMARK 500 O HOH A 516 O HOH B 437 1655 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 15 37.22 -85.75 REMARK 500 THR A 17 154.99 50.09 REMARK 500 ASP A 88 -121.95 53.03 REMARK 500 SER A 115 -162.98 -161.03 REMARK 500 ARG B 16 -98.57 -84.82 REMARK 500 THR B 17 24.40 -56.24 REMARK 500 ASN B 18 164.46 34.49 REMARK 500 ALA B 60 74.56 -104.03 REMARK 500 TYR B 74 76.69 -158.20 REMARK 500 GLU B 132 -179.59 -170.12 REMARK 500 PRO B 148 -53.90 -18.68 REMARK 500 GLN B 149 179.38 85.76 REMARK 500 ALA B 151 119.60 56.26 REMARK 500 PHE B 158 -61.23 -120.83 REMARK 500 MET B 207 170.90 -59.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL B 14 ASN B 15 -138.41 REMARK 500 THR B 17 ASN B 18 -148.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 ZN5 A 301 REMARK 610 ZN5 B 301 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN5 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN5 B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3F0P RELATED DB: PDB REMARK 900 RELATED ID: 5C0U RELATED DB: PDB REMARK 900 RELATED ID: 5C17 RELATED DB: PDB REMARK 900 RELATED ID: 5C0T RELATED DB: PDB REMARK 900 RELATED ID: 5U79 RELATED DB: PDB REMARK 900 RELATED ID: 5U7B RELATED DB: PDB REMARK 900 RELATED ID: 5U7C RELATED DB: PDB REMARK 900 RELATED ID: 5U82 RELATED DB: PDB REMARK 900 RELATED ID: 5U83 RELATED DB: PDB REMARK 900 RELATED ID: 5U88 RELATED DB: PDB DBREF 5U7A A 1 212 UNP P77072 MERB_ECOLX 1 212 DBREF 5U7A B 1 212 UNP P77072 MERB_ECOLX 1 212 SEQRES 1 A 212 MET LYS LEU ALA PRO TYR ILE LEU GLU LEU LEU THR SER SEQRES 2 A 212 VAL ASN ARG THR ASN GLY THR ALA ASP LEU LEU VAL PRO SEQRES 3 A 212 LEU LEU ARG GLU LEU ALA LYS GLY ARG PRO VAL SER ARG SEQRES 4 A 212 THR THR LEU ALA GLY ILE LEU ASP TRP PRO ALA GLU ARG SEQRES 5 A 212 VAL ALA ALA VAL LEU GLU GLN ALA THR SER THR GLU TYR SEQRES 6 A 212 ASP LYS ASP GLY ASN ILE ILE GLY TYR GLY LEU THR LEU SEQRES 7 A 212 ARG GLU THR SER TYR VAL PHE GLU ILE ASP ASP ARG ARG SEQRES 8 A 212 LEU TYR ALA TRP CYS ALA LEU ASP THR LEU ILE PHE PRO SEQRES 9 A 212 ALA LEU ILE GLY ARG THR ALA ARG VAL SER SER HIS CYS SEQRES 10 A 212 ALA ALA THR GLY ALA PRO VAL SER LEU THR VAL SER PRO SEQRES 11 A 212 SER GLU ILE GLN ALA VAL GLU PRO ALA GLY MET ALA VAL SEQRES 12 A 212 SER LEU VAL LEU PRO GLN GLU ALA ALA ASP VAL ARG GLN SEQRES 13 A 212 SER PHE CYS CYS HIS VAL HIS PHE PHE ALA SER VAL PRO SEQRES 14 A 212 THR ALA GLU ASP TRP ALA SER LYS HIS GLN GLY LEU GLU SEQRES 15 A 212 GLY LEU ALA ILE VAL SER VAL HIS GLU ALA PHE GLY LEU SEQRES 16 A 212 GLY GLN GLU PHE ASN ARG HIS LEU LEU GLN THR MET SER SEQRES 17 A 212 SER ARG THR PRO SEQRES 1 B 212 MET LYS LEU ALA PRO TYR ILE LEU GLU LEU LEU THR SER SEQRES 2 B 212 VAL ASN ARG THR ASN GLY THR ALA ASP LEU LEU VAL PRO SEQRES 3 B 212 LEU LEU ARG GLU LEU ALA LYS GLY ARG PRO VAL SER ARG SEQRES 4 B 212 THR THR LEU ALA GLY ILE LEU ASP TRP PRO ALA GLU ARG SEQRES 5 B 212 VAL ALA ALA VAL LEU GLU GLN ALA THR SER THR GLU TYR SEQRES 6 B 212 ASP LYS ASP GLY ASN ILE ILE GLY TYR GLY LEU THR LEU SEQRES 7 B 212 ARG GLU THR SER TYR VAL PHE GLU ILE ASP ASP ARG ARG SEQRES 8 B 212 LEU TYR ALA TRP CYS ALA LEU ASP THR LEU ILE PHE PRO SEQRES 9 B 212 ALA LEU ILE GLY ARG THR ALA ARG VAL SER SER HIS CYS SEQRES 10 B 212 ALA ALA THR GLY ALA PRO VAL SER LEU THR VAL SER PRO SEQRES 11 B 212 SER GLU ILE GLN ALA VAL GLU PRO ALA GLY MET ALA VAL SEQRES 12 B 212 SER LEU VAL LEU PRO GLN GLU ALA ALA ASP VAL ARG GLN SEQRES 13 B 212 SER PHE CYS CYS HIS VAL HIS PHE PHE ALA SER VAL PRO SEQRES 14 B 212 THR ALA GLU ASP TRP ALA SER LYS HIS GLN GLY LEU GLU SEQRES 15 B 212 GLY LEU ALA ILE VAL SER VAL HIS GLU ALA PHE GLY LEU SEQRES 16 B 212 GLY GLN GLU PHE ASN ARG HIS LEU LEU GLN THR MET SER SEQRES 17 B 212 SER ARG THR PRO HET ZN5 A 301 1 HET BR A 302 1 HET PO4 A 303 5 HET ZN5 B 301 1 HETNAM ZN5 DIMETHYLTIN DIBROMIDE HETNAM BR BROMIDE ION HETNAM PO4 PHOSPHATE ION FORMUL 3 ZN5 2(C2 H6 BR2 SN) FORMUL 4 BR BR 1- FORMUL 5 PO4 O4 P 3- FORMUL 7 HOH *276(H2 O) HELIX 1 AA1 LEU A 3 ASN A 15 1 13 HELIX 2 AA2 GLY A 19 ALA A 32 1 14 HELIX 3 AA3 SER A 38 ASP A 47 1 10 HELIX 4 AA4 PRO A 49 ALA A 60 1 12 HELIX 5 AA5 CYS A 96 GLY A 108 1 13 HELIX 6 AA6 VAL A 154 VAL A 162 1 9 HELIX 7 AA7 SER A 167 LYS A 177 1 11 HELIX 8 AA8 VAL A 189 THR A 206 1 18 HELIX 9 AA9 LEU B 3 VAL B 14 1 12 HELIX 10 AB1 GLY B 19 ALA B 32 1 14 HELIX 11 AB2 SER B 38 ASP B 47 1 10 HELIX 12 AB3 PRO B 49 GLN B 59 1 11 HELIX 13 AB4 CYS B 96 GLY B 108 1 13 HELIX 14 AB5 ASP B 153 PHE B 158 1 6 HELIX 15 AB6 CYS B 159 VAL B 162 5 4 HELIX 16 AB7 SER B 167 SER B 176 1 10 HELIX 17 AB8 VAL B 189 MET B 207 1 19 SHEET 1 AA1 2 GLU A 64 TYR A 65 0 SHEET 2 AA1 2 ILE A 71 GLY A 73 -1 O ILE A 72 N GLU A 64 SHEET 1 AA2 6 LEU A 76 THR A 77 0 SHEET 2 AA2 6 ARG A 90 ALA A 94 -1 O TYR A 93 N THR A 77 SHEET 3 AA2 6 TYR A 83 ILE A 87 -1 N PHE A 85 O LEU A 92 SHEET 4 AA2 6 ALA A 111 HIS A 116 -1 O SER A 114 N VAL A 84 SHEET 5 AA2 6 PRO A 123 VAL A 128 -1 O VAL A 128 N ALA A 111 SHEET 6 AA2 6 ILE A 133 GLU A 137 -1 O GLU A 137 N SER A 125 SHEET 1 AA3 3 PHE A 164 PHE A 165 0 SHEET 2 AA3 3 ALA A 142 LEU A 145 -1 N ALA A 142 O PHE A 165 SHEET 3 AA3 3 ALA A 185 SER A 188 -1 O ALA A 185 N LEU A 145 SHEET 1 AA4 2 GLU B 64 TYR B 65 0 SHEET 2 AA4 2 ILE B 71 GLY B 73 -1 O ILE B 72 N GLU B 64 SHEET 1 AA5 6 LEU B 76 THR B 77 0 SHEET 2 AA5 6 ARG B 90 ALA B 94 -1 O TYR B 93 N THR B 77 SHEET 3 AA5 6 TYR B 83 ILE B 87 -1 N PHE B 85 O LEU B 92 SHEET 4 AA5 6 ALA B 111 HIS B 116 -1 O ARG B 112 N GLU B 86 SHEET 5 AA5 6 PRO B 123 VAL B 128 -1 O LEU B 126 N VAL B 113 SHEET 6 AA5 6 ILE B 133 GLU B 137 -1 O GLN B 134 N THR B 127 SHEET 1 AA6 3 PHE B 164 PHE B 165 0 SHEET 2 AA6 3 ALA B 142 LEU B 145 -1 N ALA B 142 O PHE B 165 SHEET 3 AA6 3 ALA B 185 SER B 188 -1 O VAL B 187 N VAL B 143 CISPEP 1 GLU A 137 PRO A 138 0 -2.50 CISPEP 2 GLN A 149 GLU A 150 0 2.13 CISPEP 3 GLU B 137 PRO B 138 0 -1.35 SITE 1 AC1 5 CYS A 96 ASP A 99 HOH A 457 HOH A 524 SITE 2 AC1 5 HOH A 529 SITE 1 AC2 2 PRO A 5 HOH B 479 SITE 1 AC3 10 CYS A 160 HIS A 161 HIS A 163 TRP A 174 SITE 2 AC3 10 HIS A 178 HOH A 447 HOH A 454 TRP B 174 SITE 3 AC3 10 HIS B 178 HOH B 453 SITE 1 AC4 5 ASP B 99 HOH B 407 HOH B 488 HOH B 499 SITE 2 AC4 5 HOH B 522 CRYST1 38.055 88.648 51.490 90.00 100.34 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026278 0.000000 0.004794 0.00000 SCALE2 0.000000 0.011281 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019742 0.00000