HEADER OXIDOREDUCTASE/CHAPERONE 16-DEC-16 5U9M TITLE COPPER-ZINC SUPEROXIDE DISMUTASE IS ACTIVATED THROUGH A SULFENIC ACID TITLE 2 INTERMEDIATE AT A COPPER-ION ENTRY SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPEROXIDE DISMUTASE [CU-ZN]; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: SUPEROXIDE DISMUTASE 1,HSOD1; COMPND 5 EC: 1.15.1.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: SUPEROXIDE DISMUTASE 1 COPPER CHAPERONE; COMPND 10 CHAIN: B, D; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SOD1; SOURCE 6 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4932; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: EG118; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: YEP351; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 13 S288C); SOURCE 14 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 15 ORGANISM_TAXID: 559292; SOURCE 16 STRAIN: ATCC 204508 / S288C; SOURCE 17 GENE: CCS1, LYS7, YMR038C, YM9532.03C; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 20 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 21 EXPRESSION_SYSTEM_PLASMID: PKA6H KEYWDS OXIDOREDUCTASE-CHAPERONE COMPLEX, CU-ZN SUPEROXIDE DISMUTASE, KEYWDS 2 METALLOCHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR A.B.TAYLOR,P.J.HART,D.D.WINKLER REVDAT 4 04-OCT-23 5U9M 1 LINK REVDAT 3 02-AUG-17 5U9M 1 JRNL REVDAT 2 07-JUN-17 5U9M 1 JRNL REVDAT 1 31-MAY-17 5U9M 0 JRNL AUTH M.M.FETHEROLF,S.D.BOYD,A.B.TAYLOR,H.J.KIM,J.A.WOHLSCHLEGEL, JRNL AUTH 2 N.J.BLACKBURN,P.J.HART,D.R.WINGE,D.D.WINKLER JRNL TITL COPPER-ZINC SUPEROXIDE DISMUTASE IS ACTIVATED THROUGH A JRNL TITL 2 SULFENIC ACID INTERMEDIATE AT A COPPER ION ENTRY SITE. JRNL REF J. BIOL. CHEM. V. 292 12025 2017 JRNL REFN ESSN 1083-351X JRNL PMID 28533431 JRNL DOI 10.1074/JBC.M117.775981 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 37948 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.270 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.9260 - 5.6608 0.99 2769 155 0.1646 0.1940 REMARK 3 2 5.6608 - 4.4943 1.00 2625 146 0.1464 0.1797 REMARK 3 3 4.4943 - 3.9265 1.00 2595 143 0.1452 0.2098 REMARK 3 4 3.9265 - 3.5677 1.00 2583 145 0.1713 0.2228 REMARK 3 5 3.5677 - 3.3120 1.00 2554 141 0.1931 0.2544 REMARK 3 6 3.3120 - 3.1168 1.00 2563 144 0.2027 0.2542 REMARK 3 7 3.1168 - 2.9607 1.00 2556 141 0.2274 0.2889 REMARK 3 8 2.9607 - 2.8319 1.00 2513 140 0.2343 0.2758 REMARK 3 9 2.8319 - 2.7229 1.00 2546 141 0.2145 0.3005 REMARK 3 10 2.7229 - 2.6289 1.00 2543 142 0.2342 0.2772 REMARK 3 11 2.6289 - 2.5467 1.00 2512 139 0.2396 0.2813 REMARK 3 12 2.5467 - 2.4739 1.00 2549 143 0.2489 0.3174 REMARK 3 13 2.4739 - 2.4088 1.00 2531 140 0.2644 0.2971 REMARK 3 14 2.4088 - 2.3500 1.00 2509 140 0.2665 0.3276 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.51 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5832 REMARK 3 ANGLE : 1.142 7886 REMARK 3 CHIRALITY : 0.046 890 REMARK 3 PLANARITY : 0.005 1037 REMARK 3 DIHEDRAL : 13.126 2116 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5U9M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1000225539. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38015 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 48.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.11200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 1.12500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1OZU,1JK9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25 % PEG 3350, 0.2 M AMMONIUM SULFATE, REMARK 280 0.1 M BIS-TRIS PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 49.54850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 92.17650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 49.54850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 92.17650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR B 2 REMARK 465 THR B 3 REMARK 465 ASN B 4 REMARK 465 ASP B 5 REMARK 465 THR B 6 REMARK 465 TYR B 7 REMARK 465 PRO B 14 REMARK 465 MET B 15 REMARK 465 HIS B 16 REMARK 465 ARG B 62 REMARK 465 ASN B 63 REMARK 465 CYS B 64 REMARK 465 GLY B 65 REMARK 465 LYS B 66 REMARK 465 ASP B 242 REMARK 465 ALA B 243 REMARK 465 LEU B 244 REMARK 465 ALA B 245 REMARK 465 ASN B 246 REMARK 465 ASN B 247 REMARK 465 ILE B 248 REMARK 465 LYS B 249 REMARK 465 THR D 2 REMARK 465 THR D 3 REMARK 465 ASN D 4 REMARK 465 ASP D 5 REMARK 465 MET D 15 REMARK 465 HIS D 16 REMARK 465 ASP D 242 REMARK 465 ALA D 243 REMARK 465 LEU D 244 REMARK 465 ALA D 245 REMARK 465 ASN D 246 REMARK 465 ASN D 247 REMARK 465 ILE D 248 REMARK 465 LYS D 249 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP D 93 OH TYR D 209 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS B 159 79.31 -106.64 REMARK 500 PRO B 179 49.31 -82.28 REMARK 500 SER B 204 0.43 -63.88 REMARK 500 ASN C 65 59.73 -145.52 REMARK 500 CYS D 159 79.43 -105.48 REMARK 500 PRO D 179 49.00 -82.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 63 ND1 REMARK 620 2 HIS A 71 ND1 101.2 REMARK 620 3 HIS A 80 ND1 112.8 127.4 REMARK 620 4 ASP A 83 OD1 89.9 99.6 118.6 REMARK 620 5 ASP A 83 OD2 143.2 80.9 93.1 54.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 17 SG REMARK 620 2 CYS B 20 SG 108.2 REMARK 620 3 CYS D 17 SG 130.4 42.8 REMARK 620 4 CYS D 20 SG 130.6 41.3 1.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 63 ND1 REMARK 620 2 HIS C 71 ND1 105.9 REMARK 620 3 HIS C 80 ND1 114.8 125.1 REMARK 620 4 ASP C 83 OD1 94.0 96.7 114.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 201 DBREF 5U9M A 1 153 UNP P00441 SODC_HUMAN 2 154 DBREF 5U9M B 2 249 UNP P40202 CCS1_YEAST 2 249 DBREF 5U9M C 1 153 UNP P00441 SODC_HUMAN 2 154 DBREF 5U9M D 2 249 UNP P40202 CCS1_YEAST 2 249 SEQADV 5U9M ARG A 46 UNP P00441 HIS 47 ENGINEERED MUTATION SEQADV 5U9M GLN A 48 UNP P00441 HIS 49 ENGINEERED MUTATION SEQADV 5U9M ALA B 238 UNP P40202 GLU 238 ENGINEERED MUTATION SEQADV 5U9M ALA B 239 UNP P40202 GLU 239 ENGINEERED MUTATION SEQADV 5U9M ALA B 240 UNP P40202 ARG 240 ENGINEERED MUTATION SEQADV 5U9M ARG C 46 UNP P00441 HIS 47 ENGINEERED MUTATION SEQADV 5U9M GLN C 48 UNP P00441 HIS 49 ENGINEERED MUTATION SEQADV 5U9M ALA D 238 UNP P40202 GLU 238 ENGINEERED MUTATION SEQADV 5U9M ALA D 239 UNP P40202 GLU 239 ENGINEERED MUTATION SEQADV 5U9M ALA D 240 UNP P40202 ARG 240 ENGINEERED MUTATION SEQRES 1 A 153 ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY PRO SEQRES 2 A 153 VAL GLN GLY ILE ILE ASN PHE GLU GLN LYS GLU SER ASN SEQRES 3 A 153 GLY PRO VAL LYS VAL TRP GLY SER ILE LYS GLY LEU THR SEQRES 4 A 153 GLU GLY LEU HIS GLY PHE ARG VAL GLN GLU PHE GLY ASP SEQRES 5 A 153 ASN THR ALA GLY CYS THR SER ALA GLY PRO HIS PHE ASN SEQRES 6 A 153 PRO LEU SER ARG LYS HIS GLY GLY PRO LYS ASP GLU GLU SEQRES 7 A 153 ARG HIS VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS SEQRES 8 A 153 ASP GLY VAL ALA ASP VAL SER ILE GLU ASP SER VAL ILE SEQRES 9 A 153 SER LEU SER GLY ASP HIS CYS ILE ILE GLY ARG THR LEU SEQRES 10 A 153 VAL VAL HIS GLU LYS ALA ASP ASP LEU GLY LYS GLY GLY SEQRES 11 A 153 ASN GLU GLU SER THR LYS THR GLY ASN ALA GLY SER ARG SEQRES 12 A 153 LEU ALA CYS GLY VAL ILE GLY ILE ALA GLN SEQRES 1 B 248 THR THR ASN ASP THR TYR GLU ALA THR TYR ALA ILE PRO SEQRES 2 B 248 MET HIS CYS GLU ASN CYS VAL ASN ASP ILE LYS ALA CYS SEQRES 3 B 248 LEU LYS ASN VAL PRO GLY ILE ASN SER LEU ASN PHE ASP SEQRES 4 B 248 ILE GLU GLN GLN ILE MET SER VAL GLU SER SER VAL ALA SEQRES 5 B 248 PRO SER THR ILE ILE ASN THR LEU ARG ASN CYS GLY LYS SEQRES 6 B 248 ASP ALA ILE ILE ARG GLY ALA GLY LYS PRO ASN SER SER SEQRES 7 B 248 ALA VAL ALA ILE LEU GLU THR PHE GLN LYS TYR THR ILE SEQRES 8 B 248 ASP GLN LYS LYS ASP THR ALA VAL ARG GLY LEU ALA ARG SEQRES 9 B 248 ILE VAL GLN VAL GLY GLU ASN LYS THR LEU PHE ASP ILE SEQRES 10 B 248 THR VAL ASN GLY VAL PRO GLU ALA GLY ASN TYR HIS ALA SEQRES 11 B 248 SER ILE HIS GLU LYS GLY ASP VAL SER LYS GLY VAL GLU SEQRES 12 B 248 SER THR GLY LYS VAL TRP HIS LYS PHE ASP GLU PRO ILE SEQRES 13 B 248 GLU CYS PHE ASN GLU SER ASP LEU GLY LYS ASN LEU TYR SEQRES 14 B 248 SER GLY LYS THR PHE LEU SER ALA PRO LEU PRO THR TRP SEQRES 15 B 248 GLN LEU ILE GLY ARG SER PHE VAL ILE SER LYS SER LEU SEQRES 16 B 248 ASN HIS PRO GLU ASN GLU PRO SER SER VAL LYS ASP TYR SEQRES 17 B 248 SER PHE LEU GLY VAL ILE ALA ARG SER ALA GLY VAL TRP SEQRES 18 B 248 GLU ASN ASN LYS GLN VAL CYS ALA CYS THR GLY LYS THR SEQRES 19 B 248 VAL TRP ALA ALA ALA LYS ASP ALA LEU ALA ASN ASN ILE SEQRES 20 B 248 LYS SEQRES 1 C 153 ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY PRO SEQRES 2 C 153 VAL GLN GLY ILE ILE ASN PHE GLU GLN LYS GLU SER ASN SEQRES 3 C 153 GLY PRO VAL LYS VAL TRP GLY SER ILE LYS GLY LEU THR SEQRES 4 C 153 GLU GLY LEU HIS GLY PHE ARG VAL GLN GLU PHE GLY ASP SEQRES 5 C 153 ASN THR ALA GLY CYS THR SER ALA GLY PRO HIS PHE ASN SEQRES 6 C 153 PRO LEU SER ARG LYS HIS GLY GLY PRO LYS ASP GLU GLU SEQRES 7 C 153 ARG HIS VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS SEQRES 8 C 153 ASP GLY VAL ALA ASP VAL SER ILE GLU ASP SER VAL ILE SEQRES 9 C 153 SER LEU SER GLY ASP HIS CYS ILE ILE GLY ARG THR LEU SEQRES 10 C 153 VAL VAL HIS GLU LYS ALA ASP ASP LEU GLY LYS GLY GLY SEQRES 11 C 153 ASN GLU GLU SER THR LYS THR GLY ASN ALA GLY SER ARG SEQRES 12 C 153 LEU ALA CYS GLY VAL ILE GLY ILE ALA GLN SEQRES 1 D 248 THR THR ASN ASP THR TYR GLU ALA THR TYR ALA ILE PRO SEQRES 2 D 248 MET HIS CYS GLU ASN CYS VAL ASN ASP ILE LYS ALA CYS SEQRES 3 D 248 LEU LYS ASN VAL PRO GLY ILE ASN SER LEU ASN PHE ASP SEQRES 4 D 248 ILE GLU GLN GLN ILE MET SER VAL GLU SER SER VAL ALA SEQRES 5 D 248 PRO SER THR ILE ILE ASN THR LEU ARG ASN CYS GLY LYS SEQRES 6 D 248 ASP ALA ILE ILE ARG GLY ALA GLY LYS PRO ASN SER SER SEQRES 7 D 248 ALA VAL ALA ILE LEU GLU THR PHE GLN LYS TYR THR ILE SEQRES 8 D 248 ASP GLN LYS LYS ASP THR ALA VAL ARG GLY LEU ALA ARG SEQRES 9 D 248 ILE VAL GLN VAL GLY GLU ASN LYS THR LEU PHE ASP ILE SEQRES 10 D 248 THR VAL ASN GLY VAL PRO GLU ALA GLY ASN TYR HIS ALA SEQRES 11 D 248 SER ILE HIS GLU LYS GLY ASP VAL SER LYS GLY VAL GLU SEQRES 12 D 248 SER THR GLY LYS VAL TRP HIS LYS PHE ASP GLU PRO ILE SEQRES 13 D 248 GLU CYS PHE ASN GLU SER ASP LEU GLY LYS ASN LEU TYR SEQRES 14 D 248 SER GLY LYS THR PHE LEU SER ALA PRO LEU PRO THR TRP SEQRES 15 D 248 GLN LEU ILE GLY ARG SER PHE VAL ILE SER LYS SER LEU SEQRES 16 D 248 ASN HIS PRO GLU ASN GLU PRO SER SER VAL LYS ASP TYR SEQRES 17 D 248 SER PHE LEU GLY VAL ILE ALA ARG SER ALA GLY VAL TRP SEQRES 18 D 248 GLU ASN ASN LYS GLN VAL CYS ALA CYS THR GLY LYS THR SEQRES 19 D 248 VAL TRP ALA ALA ALA LYS ASP ALA LEU ALA ASN ASN ILE SEQRES 20 D 248 LYS HET ZN A 201 1 HET ZN B 301 1 HET ZN C 201 1 HETNAM ZN ZINC ION FORMUL 5 ZN 3(ZN 2+) FORMUL 8 HOH *120(H2 O) HELIX 1 AA1 GLY A 56 GLY A 61 1 6 HELIX 2 AA2 SER A 107 CYS A 111 5 5 HELIX 3 AA3 GLU A 133 GLY A 138 1 6 HELIX 4 AA4 GLU B 18 LYS B 29 1 12 HELIX 5 AA5 ALA B 53 LEU B 61 1 9 HELIX 6 AA6 LYS B 141 GLY B 147 5 7 HELIX 7 AA7 PRO B 181 LEU B 185 5 5 HELIX 8 AA8 GLY C 56 GLY C 61 1 6 HELIX 9 AA9 SER C 107 CYS C 111 5 5 HELIX 10 AB1 ASN C 131 GLY C 138 1 8 HELIX 11 AB2 GLU D 18 LYS D 29 1 12 HELIX 12 AB3 ALA D 53 ASN D 63 1 11 HELIX 13 AB4 LYS D 141 GLY D 147 5 7 HELIX 14 AB5 PRO D 181 LEU D 185 5 5 HELIX 15 AB6 HIS D 198 GLU D 202 5 5 SHEET 1 AA1 5 ALA A 95 ASP A 101 0 SHEET 2 AA1 5 VAL A 29 LYS A 36 -1 N ILE A 35 O ALA A 95 SHEET 3 AA1 5 GLN A 15 GLU A 21 -1 N ASN A 19 O TRP A 32 SHEET 4 AA1 5 LYS A 3 LYS A 9 -1 N ALA A 4 O PHE A 20 SHEET 5 AA1 5 GLY A 150 GLN A 153 -1 O GLY A 150 N VAL A 5 SHEET 1 AA2 4 ASP A 83 ALA A 89 0 SHEET 2 AA2 4 GLY A 41 VAL A 47 -1 N GLY A 41 O ALA A 89 SHEET 3 AA2 4 THR A 116 HIS A 120 -1 O HIS A 120 N GLY A 44 SHEET 4 AA2 4 ARG A 143 VAL A 148 -1 O GLY A 147 N LEU A 117 SHEET 1 AA3 4 ILE B 34 ASP B 40 0 SHEET 2 AA3 4 ILE B 45 SER B 50 -1 O SER B 47 N ASN B 38 SHEET 3 AA3 4 ALA B 9 ALA B 12 -1 N TYR B 11 O MET B 46 SHEET 4 AA3 4 ILE B 69 ARG B 71 -1 O ARG B 71 N THR B 10 SHEET 1 AA4 9 VAL B 149 CYS B 159 0 SHEET 2 AA4 9 GLY B 127 HIS B 134 -1 N TYR B 129 O ILE B 157 SHEET 3 AA4 9 SER B 189 SER B 195 -1 O SER B 193 N HIS B 130 SHEET 4 AA4 9 ASP B 208 VAL B 214 -1 O TYR B 209 N LYS B 194 SHEET 5 AA4 9 SER B 79 THR B 86 -1 N GLU B 85 O LEU B 212 SHEET 6 AA4 9 VAL B 100 GLN B 108 -1 O ILE B 106 N ALA B 80 SHEET 7 AA4 9 THR B 114 VAL B 123 -1 O ASP B 117 N ARG B 105 SHEET 8 AA4 9 TYR B 170 ALA B 178 -1 O GLY B 172 N VAL B 120 SHEET 9 AA4 9 ASN B 161 GLU B 162 -1 N ASN B 161 O SER B 171 SHEET 1 AA5 6 VAL B 149 CYS B 159 0 SHEET 2 AA5 6 GLY B 127 HIS B 134 -1 N TYR B 129 O ILE B 157 SHEET 3 AA5 6 SER B 189 SER B 195 -1 O SER B 193 N HIS B 130 SHEET 4 AA5 6 ASP B 208 VAL B 214 -1 O TYR B 209 N LYS B 194 SHEET 5 AA5 6 SER B 79 THR B 86 -1 N GLU B 85 O LEU B 212 SHEET 6 AA5 6 ALA B 216 ARG B 217 -1 O ALA B 216 N VAL B 81 SHEET 1 AA6 2 GLN B 227 CYS B 229 0 SHEET 2 AA6 2 THR B 235 ALA B 238 -1 O TRP B 237 N VAL B 228 SHEET 1 AA7 9 LYS C 3 LYS C 9 0 SHEET 2 AA7 9 GLN C 15 GLU C 21 -1 O ILE C 18 N CYS C 6 SHEET 3 AA7 9 VAL C 29 LYS C 36 -1 O LYS C 30 N GLU C 21 SHEET 4 AA7 9 ALA C 95 ASP C 101 -1 O ALA C 95 N ILE C 35 SHEET 5 AA7 9 ASP C 83 ALA C 89 -1 N THR C 88 O ASP C 96 SHEET 6 AA7 9 GLY C 41 VAL C 47 -1 N GLY C 41 O ALA C 89 SHEET 7 AA7 9 THR C 116 HIS C 120 -1 O VAL C 118 N ARG C 46 SHEET 8 AA7 9 ARG C 143 GLN C 153 -1 O GLY C 147 N LEU C 117 SHEET 9 AA7 9 LYS C 3 LYS C 9 -1 N VAL C 5 O GLY C 150 SHEET 1 AA8 4 ILE D 34 ASP D 40 0 SHEET 2 AA8 4 ILE D 45 SER D 50 -1 O GLU D 49 N ASN D 35 SHEET 3 AA8 4 TYR D 7 ALA D 12 -1 N ALA D 9 O VAL D 48 SHEET 4 AA8 4 ILE D 69 ARG D 71 -1 O ILE D 69 N ALA D 12 SHEET 1 AA9 9 VAL D 149 CYS D 159 0 SHEET 2 AA9 9 GLY D 127 HIS D 134 -1 N ILE D 133 O TRP D 150 SHEET 3 AA9 9 SER D 189 SER D 195 -1 O VAL D 191 N SER D 132 SHEET 4 AA9 9 ASP D 208 VAL D 214 -1 O TYR D 209 N LYS D 194 SHEET 5 AA9 9 SER D 79 THR D 86 -1 N GLU D 85 O LEU D 212 SHEET 6 AA9 9 VAL D 100 GLN D 108 -1 O ILE D 106 N ALA D 80 SHEET 7 AA9 9 THR D 114 VAL D 123 -1 O ASP D 117 N ARG D 105 SHEET 8 AA9 9 GLY D 166 ALA D 178 -1 O GLY D 172 N VAL D 120 SHEET 9 AA9 9 ASN D 161 SER D 163 -1 N ASN D 161 O SER D 171 SHEET 1 AB1 6 VAL D 149 CYS D 159 0 SHEET 2 AB1 6 GLY D 127 HIS D 134 -1 N ILE D 133 O TRP D 150 SHEET 3 AB1 6 SER D 189 SER D 195 -1 O VAL D 191 N SER D 132 SHEET 4 AB1 6 ASP D 208 VAL D 214 -1 O TYR D 209 N LYS D 194 SHEET 5 AB1 6 SER D 79 THR D 86 -1 N GLU D 85 O LEU D 212 SHEET 6 AB1 6 ALA D 216 SER D 218 -1 O ALA D 216 N VAL D 81 SHEET 1 AB2 2 GLN D 227 CYS D 229 0 SHEET 2 AB2 2 THR D 235 ALA D 238 -1 O TRP D 237 N VAL D 228 SSBOND 1 CYS D 27 CYS D 64 1555 1555 2.03 LINK ND1 HIS A 63 ZN ZN A 201 1555 1555 1.96 LINK ND1 HIS A 71 ZN ZN A 201 1555 1555 2.13 LINK ND1 HIS A 80 ZN ZN A 201 1555 1555 1.99 LINK OD1 ASP A 83 ZN ZN A 201 1555 1555 2.07 LINK OD2 ASP A 83 ZN ZN A 201 1555 1555 2.69 LINK SG CYS B 17 ZN ZN B 301 1555 1555 2.28 LINK SG CYS B 20 ZN ZN B 301 1555 1555 2.36 LINK ZN ZN B 301 SG CYS D 17 1656 1555 2.65 LINK ZN ZN B 301 SG CYS D 20 1656 1555 2.92 LINK ND1 HIS C 63 ZN ZN C 201 1555 1555 2.08 LINK ND1 HIS C 71 ZN ZN C 201 1555 1555 2.06 LINK ND1 HIS C 80 ZN ZN C 201 1555 1555 2.01 LINK OD1 ASP C 83 ZN ZN C 201 1555 1555 1.90 SITE 1 AC1 4 HIS A 63 HIS A 71 HIS A 80 ASP A 83 SITE 1 AC2 4 CYS B 17 CYS B 20 CYS D 17 CYS D 20 SITE 1 AC3 4 HIS C 63 HIS C 71 HIS C 80 ASP C 83 CRYST1 99.097 184.353 48.514 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010091 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005424 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020613 0.00000