HEADER TRANSCRIPTION/DNA 18-DEC-16 5UA1 TITLE MYCOBACTERIUM TUBERCULOSIS KSTR IN COMPLEX WITH A 18-BP DNA OPERATOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: HTH-TYPE TRANSCRIPTIONAL REPRESSOR KSTR; COMPND 3 CHAIN: B, A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'- COMPND 7 D(*AP*CP*TP*AP*GP*AP*AP*CP*GP*TP*GP*TP*TP*CP*TP*AP*AP*T)-3'); COMPND 8 CHAIN: C, E; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: DNA (5'- COMPND 12 D(*AP*TP*TP*AP*GP*AP*AP*CP*AP*CP*GP*TP*TP*CP*TP*AP*GP*T)-3'); COMPND 13 CHAIN: D, F; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25618 / SOURCE 3 H37RV); SOURCE 4 ORGANISM_TAXID: 83332; SOURCE 5 STRAIN: ATCC 25618 / H37RV; SOURCE 6 GENE: KSTR, RV3574; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 13 ORGANISM_TAXID: 83332; SOURCE 14 MOL_ID: 3; SOURCE 15 SYNTHETIC: YES; SOURCE 16 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 17 ORGANISM_TAXID: 83332 KEYWDS KSTR, DNA, COMPLEX, TRANSCRIPTIONAL REGULATOR, TETR FAMILY KEYWDS 2 TRANSCRIPTIONAL REPRESSOR, STRUCTURAL GENOMICS TB STRUCTURAL KEYWDS 3 GENOMICS CONSORTIUM, TBSGC, TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR N.A.T.HO,S.S.DAWES,E.N.BAKER,J.S.LOTT,TB STRUCTURAL GENOMICS AUTHOR 2 CONSORTIUM (TBSGC) REVDAT 3 04-OCT-23 5UA1 1 REMARK REVDAT 2 01-JAN-20 5UA1 1 REMARK REVDAT 1 22-NOV-17 5UA1 0 JRNL AUTH N.A.T.HO,S.S.DAWES,E.N.BAKER,J.S.LOTT JRNL TITL CRYSTAL STRUCTURE OF KSTR IN COMPLEX WITH COGNATE DNA JRNL TITL 2 OPERATOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2614: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 24235 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1233 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.8591 - 6.0285 0.99 2547 136 0.1937 0.2293 REMARK 3 2 6.0285 - 4.7865 1.00 2546 150 0.2147 0.2620 REMARK 3 3 4.7865 - 4.1819 1.00 2567 127 0.1948 0.2071 REMARK 3 4 4.1819 - 3.7997 1.00 2570 132 0.2016 0.2599 REMARK 3 5 3.7997 - 3.5275 1.00 2571 126 0.2302 0.2398 REMARK 3 6 3.5275 - 3.3196 1.00 2547 145 0.2385 0.3020 REMARK 3 7 3.3196 - 3.1534 0.99 2553 140 0.2844 0.3368 REMARK 3 8 3.1534 - 3.0161 1.00 2537 159 0.3189 0.3485 REMARK 3 9 3.0161 - 2.9000 1.00 2564 118 0.3425 0.4269 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.600 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4248 REMARK 3 ANGLE : 0.519 6058 REMARK 3 CHIRALITY : 0.030 709 REMARK 3 PLANARITY : 0.003 521 REMARK 3 DIHEDRAL : 22.858 2278 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UA1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1000225477. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24284 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 48.560 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.15500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 1.04500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5CXG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 3350, 9% MPD, 0.2 M LI2SO4, REMARK 280 0.1 M IMIDAZOLE-HCL, PH 6.5, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.71150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.08100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.64000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.08100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.71150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.64000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B -3 REMARK 465 ALA B -2 REMARK 465 MET B -1 REMARK 465 GLU B 0 REMARK 465 VAL B 1 REMARK 465 ALA B 2 REMARK 465 VAL B 3 REMARK 465 LEU B 4 REMARK 465 ALA B 5 REMARK 465 GLU B 6 REMARK 465 SER B 7 REMARK 465 GLU B 8 REMARK 465 THR B 79 REMARK 465 ASP B 80 REMARK 465 ARG B 81 REMARK 465 SER B 82 REMARK 465 ALA B 83 REMARK 465 VAL B 84 REMARK 465 ASN B 146 REMARK 465 GLY B 147 REMARK 465 ASP B 195 REMARK 465 GLN B 196 REMARK 465 ASP B 197 REMARK 465 SER B 198 REMARK 465 ALA B 199 REMARK 465 GLY A -3 REMARK 465 ALA A -2 REMARK 465 MET A -1 REMARK 465 GLU A 0 REMARK 465 VAL A 1 REMARK 465 ALA A 2 REMARK 465 VAL A 3 REMARK 465 LEU A 4 REMARK 465 ALA A 5 REMARK 465 GLU A 6 REMARK 465 SER A 7 REMARK 465 GLU A 8 REMARK 465 THR A 79 REMARK 465 ASP A 80 REMARK 465 ARG A 81 REMARK 465 SER A 82 REMARK 465 ALA A 83 REMARK 465 VAL A 84 REMARK 465 ALA A 85 REMARK 465 GLY A 86 REMARK 465 GLY A 147 REMARK 465 ASP A 195 REMARK 465 GLN A 196 REMARK 465 ASP A 197 REMARK 465 SER A 198 REMARK 465 ALA A 199 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU B 9 CG CD1 CD2 REMARK 470 SER B 11 OG REMARK 470 ARG B 15 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 17 NH1 NH2 REMARK 470 ARG B 18 NH1 NH2 REMARK 470 ARG B 20 CZ NH1 NH2 REMARK 470 LYS B 31 CG CD CE NZ REMARK 470 GLU B 35 CG CD OE1 OE2 REMARK 470 ARG B 55 CD NE CZ NH1 NH2 REMARK 470 LYS B 78 CG CD CE NZ REMARK 470 GLN B 91 CG CD OE1 NE2 REMARK 470 MET B 96 SD CE REMARK 470 LEU B 100 CG CD1 CD2 REMARK 470 ARG B 106 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 134 CE NZ REMARK 470 ARG B 142 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 148 CG CD OE1 OE2 REMARK 470 ASP B 152 CG OD1 OD2 REMARK 470 ARG B 174 NE CZ NH1 NH2 REMARK 470 SER B 182 OG REMARK 470 ARG B 184 CZ NH1 NH2 REMARK 470 LEU A 9 CG CD1 CD2 REMARK 470 GLU A 12 CG CD OE1 OE2 REMARK 470 ARG A 15 CD NE CZ NH1 NH2 REMARK 470 GLU A 16 CG CD OE1 OE2 REMARK 470 ARG A 18 CZ NH1 NH2 REMARK 470 LYS A 31 CG CD CE NZ REMARK 470 GLU A 35 CG CD OE1 OE2 REMARK 470 ARG A 45 NH1 NH2 REMARK 470 ARG A 55 NE CZ NH1 NH2 REMARK 470 SER A 66 OG REMARK 470 ARG A 74 CZ NH1 NH2 REMARK 470 ILE A 75 CG1 CG2 CD1 REMARK 470 LYS A 78 CG CD CE NZ REMARK 470 THR A 88 OG1 CG2 REMARK 470 PHE A 90 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 91 CG CD OE1 NE2 REMARK 470 ARG A 92 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 94 CG OD1 ND2 REMARK 470 PHE A 95 CG CD1 CD2 CE1 CE2 CZ REMARK 470 MET A 96 CG SD CE REMARK 470 VAL A 97 CG1 CG2 REMARK 470 LYS A 99 CE NZ REMARK 470 LEU A 100 CD1 CD2 REMARK 470 ARG A 106 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 131 CG CD OE1 NE2 REMARK 470 LYS A 134 CD CE NZ REMARK 470 ARG A 142 CZ NH1 NH2 REMARK 470 ASN A 146 CG OD1 ND2 REMARK 470 GLU A 148 CG CD OE1 OE2 REMARK 470 THR A 150 OG1 CG2 REMARK 470 GLU A 151 CG CD OE1 OE2 REMARK 470 TYR A 154 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE A 156 CD1 REMARK 470 ARG A 158 NE CZ NH1 NH2 REMARK 470 ARG A 174 NE CZ NH1 NH2 REMARK 470 SER A 177 OG REMARK 470 THR A 179 OG1 CG2 REMARK 470 SER A 182 OG REMARK 470 LYS A 183 CG CD CE NZ REMARK 470 ARG A 184 NE CZ NH1 NH2 REMARK 470 VAL A 189 CG1 CG2 REMARK 470 ARG A 190 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 193 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG E 5 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 DG F 17 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL B 37 85.51 -69.48 REMARK 500 ALA B 87 -73.02 -93.10 REMARK 500 VAL A 37 77.44 -69.31 REMARK 500 ILE A 193 51.80 -98.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PGE B 202 REMARK 610 PGE A 202 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3MNL RELATED DB: PDB REMARK 900 RELATED ID: 5CXG RELATED DB: PDB REMARK 900 RELATED ID: 5CW8 RELATED DB: PDB REMARK 900 RELATED ID: 5CXI RELATED DB: PDB DBREF 5UA1 B -1 199 UNP P96856 KSTR_MYCTU 20 220 DBREF 5UA1 A -1 199 UNP P96856 KSTR_MYCTU 20 220 DBREF 5UA1 C 1 18 PDB 5UA1 5UA1 1 18 DBREF 5UA1 D 1 18 PDB 5UA1 5UA1 1 18 DBREF 5UA1 E 1 18 PDB 5UA1 5UA1 1 18 DBREF 5UA1 F 1 18 PDB 5UA1 5UA1 1 18 SEQADV 5UA1 GLY B -3 UNP P96856 EXPRESSION TAG SEQADV 5UA1 ALA B -2 UNP P96856 EXPRESSION TAG SEQADV 5UA1 GLU B 0 UNP P96856 LYS 21 CONFLICT SEQADV 5UA1 GLY A -3 UNP P96856 EXPRESSION TAG SEQADV 5UA1 ALA A -2 UNP P96856 EXPRESSION TAG SEQADV 5UA1 GLU A 0 UNP P96856 LYS 21 CONFLICT SEQRES 1 B 203 GLY ALA MET GLU VAL ALA VAL LEU ALA GLU SER GLU LEU SEQRES 2 B 203 GLY SER GLU ALA GLN ARG GLU ARG ARG LYS ARG ILE LEU SEQRES 3 B 203 ASP ALA THR MET ALA ILE ALA SER LYS GLY GLY TYR GLU SEQRES 4 B 203 ALA VAL GLN MET ARG ALA VAL ALA ASP ARG ALA ASP VAL SEQRES 5 B 203 ALA VAL GLY THR LEU TYR ARG TYR PHE PRO SER LYS VAL SEQRES 6 B 203 HIS LEU LEU VAL SER ALA LEU GLY ARG GLU PHE SER ARG SEQRES 7 B 203 ILE ASP ALA LYS THR ASP ARG SER ALA VAL ALA GLY ALA SEQRES 8 B 203 THR PRO PHE GLN ARG LEU ASN PHE MET VAL GLY LYS LEU SEQRES 9 B 203 ASN ARG ALA MET GLN ARG ASN PRO LEU LEU THR GLU ALA SEQRES 10 B 203 MET THR ARG ALA TYR VAL PHE ALA ASP ALA SER ALA ALA SEQRES 11 B 203 SER GLU VAL ASP GLN VAL GLU LYS LEU ILE ASP SER MET SEQRES 12 B 203 PHE ALA ARG ALA MET ALA ASN GLY GLU PRO THR GLU ASP SEQRES 13 B 203 GLN TYR HIS ILE ALA ARG VAL ILE SER ASP VAL TRP LEU SEQRES 14 B 203 SER ASN LEU LEU ALA TRP LEU THR ARG ARG ALA SER ALA SEQRES 15 B 203 THR ASP VAL SER LYS ARG LEU ASP LEU ALA VAL ARG LEU SEQRES 16 B 203 LEU ILE GLY ASP GLN ASP SER ALA SEQRES 1 A 203 GLY ALA MET GLU VAL ALA VAL LEU ALA GLU SER GLU LEU SEQRES 2 A 203 GLY SER GLU ALA GLN ARG GLU ARG ARG LYS ARG ILE LEU SEQRES 3 A 203 ASP ALA THR MET ALA ILE ALA SER LYS GLY GLY TYR GLU SEQRES 4 A 203 ALA VAL GLN MET ARG ALA VAL ALA ASP ARG ALA ASP VAL SEQRES 5 A 203 ALA VAL GLY THR LEU TYR ARG TYR PHE PRO SER LYS VAL SEQRES 6 A 203 HIS LEU LEU VAL SER ALA LEU GLY ARG GLU PHE SER ARG SEQRES 7 A 203 ILE ASP ALA LYS THR ASP ARG SER ALA VAL ALA GLY ALA SEQRES 8 A 203 THR PRO PHE GLN ARG LEU ASN PHE MET VAL GLY LYS LEU SEQRES 9 A 203 ASN ARG ALA MET GLN ARG ASN PRO LEU LEU THR GLU ALA SEQRES 10 A 203 MET THR ARG ALA TYR VAL PHE ALA ASP ALA SER ALA ALA SEQRES 11 A 203 SER GLU VAL ASP GLN VAL GLU LYS LEU ILE ASP SER MET SEQRES 12 A 203 PHE ALA ARG ALA MET ALA ASN GLY GLU PRO THR GLU ASP SEQRES 13 A 203 GLN TYR HIS ILE ALA ARG VAL ILE SER ASP VAL TRP LEU SEQRES 14 A 203 SER ASN LEU LEU ALA TRP LEU THR ARG ARG ALA SER ALA SEQRES 15 A 203 THR ASP VAL SER LYS ARG LEU ASP LEU ALA VAL ARG LEU SEQRES 16 A 203 LEU ILE GLY ASP GLN ASP SER ALA SEQRES 1 C 18 DA DC DT DA DG DA DA DC DG DT DG DT DT SEQRES 2 C 18 DC DT DA DA DT SEQRES 1 D 18 DA DT DT DA DG DA DA DC DA DC DG DT DT SEQRES 2 D 18 DC DT DA DG DT SEQRES 1 E 18 DA DC DT DA DG DA DA DC DG DT DG DT DT SEQRES 2 E 18 DC DT DA DA DT SEQRES 1 F 18 DA DT DT DA DG DA DA DC DA DC DG DT DT SEQRES 2 F 18 DC DT DA DG DT HET SO4 B 201 5 HET PGE B 202 4 HET SO4 A 201 5 HET PGE A 202 4 HETNAM SO4 SULFATE ION HETNAM PGE TRIETHYLENE GLYCOL FORMUL 7 SO4 2(O4 S 2-) FORMUL 8 PGE 2(C6 H14 O4) FORMUL 11 HOH *4(H2 O) HELIX 1 AA1 SER B 11 GLY B 33 1 23 HELIX 2 AA2 GLN B 38 ALA B 46 1 9 HELIX 3 AA3 ALA B 49 PHE B 57 1 9 HELIX 4 AA4 SER B 59 LYS B 78 1 20 HELIX 5 AA5 THR B 88 ASN B 107 1 20 HELIX 6 AA6 ASN B 107 PHE B 120 1 14 HELIX 7 AA7 ASP B 122 SER B 124 5 3 HELIX 8 AA8 ALA B 125 ALA B 145 1 21 HELIX 9 AA9 THR B 150 THR B 173 1 24 HELIX 10 AB1 SER B 177 GLY B 194 1 18 HELIX 11 AB2 SER A 11 GLY A 33 1 23 HELIX 12 AB3 GLN A 38 ALA A 46 1 9 HELIX 13 AB4 ALA A 49 PHE A 57 1 9 HELIX 14 AB5 SER A 59 LYS A 78 1 20 HELIX 15 AB6 THR A 88 ASN A 107 1 20 HELIX 16 AB7 ASN A 107 ALA A 121 1 15 HELIX 17 AB8 ASP A 122 SER A 124 5 3 HELIX 18 AB9 ALA A 125 ALA A 143 1 19 HELIX 19 AC1 THR A 150 THR A 173 1 24 HELIX 20 AC2 SER A 177 ILE A 193 1 17 SITE 1 AC1 1 ARG B 45 SITE 1 AC2 4 ARG A 40 DA C 7 DA F 6 DA F 7 CRYST1 61.423 79.280 116.162 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016281 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012614 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008609 0.00000