data_5UF0 # _entry.id 5UF0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5UF0 pdb_00005uf0 10.2210/pdb5uf0/pdb WWPDB D_1000224161 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-06-28 2 'Structure model' 1 1 2024-03-06 3 'Structure model' 1 2 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5UF0 _pdbx_database_status.recvd_initial_deposition_date 2017-01-03 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 5UEZ PDB . unspecified 5UEY PDB . unspecified 5UEX PDB . unspecified 5UEV PDB . unspecified 5UEP PDB . unspecified 5UET PDB . unspecified 5UES PDB . unspecified 5UER PDB . unspecified 5UEQ PDB . unspecified 5UEU PDB . unspecified 5UEO PDB . unspecified 5UEW PDB . # _audit_author.name 'Park, C.H.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Med. Chem.' _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 1520-4804 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 60 _citation.language ? _citation.page_first 3828 _citation.page_last 3850 _citation.title ;Fragment-Based, Structure-Enabled Discovery of Novel Pyridones and Pyridone Macrocycles as Potent Bromodomain and Extra-Terminal Domain (BET) Family Bromodomain Inhibitors. ; _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.7b00017 _citation.pdbx_database_id_PubMed 28368119 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, L.' 1 ? primary 'Pratt, J.K.' 2 ? primary 'Soltwedel, T.' 3 ? primary 'Sheppard, G.S.' 4 ? primary 'Fidanze, S.D.' 5 ? primary 'Liu, D.' 6 ? primary 'Hasvold, L.A.' 7 ? primary 'Mantei, R.A.' 8 ? primary 'Holms, J.H.' 9 ? primary 'McClellan, W.J.' 10 ? primary 'Wendt, M.D.' 11 ? primary 'Wada, C.' 12 ? primary 'Frey, R.' 13 ? primary 'Hansen, T.M.' 14 ? primary 'Hubbard, R.' 15 ? primary 'Park, C.H.' 16 ? primary 'Li, L.' 17 ? primary 'Magoc, T.J.' 18 ? primary 'Albert, D.H.' 19 ? primary 'Lin, X.' 20 ? primary 'Warder, S.E.' 21 ? primary 'Kovar, P.' 22 ? primary 'Huang, X.' 23 ? primary 'Wilcox, D.' 24 ? primary 'Wang, R.' 25 ? primary 'Rajaraman, G.' 26 ? primary 'Petros, A.M.' 27 ? primary 'Hutchins, C.W.' 28 ? primary 'Panchal, S.C.' 29 ? primary 'Sun, C.' 30 ? primary 'Elmore, S.W.' 31 ? primary 'Shen, Y.' 32 ? primary 'Kati, W.M.' 33 ? primary 'McDaniel, K.F.' 34 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bromodomain-containing protein 4' 12806.933 1 ? ? 'residues 352-457' ? 2 non-polymer syn '2-methyl-5-(methylamino)-6-phenylpyridazin-3(2H)-one' 215.251 1 ? ? ? ? 3 water nat water 18.015 196 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Protein HUNK1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SHMEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSN CYKYNPPDHEVVAMARKLQDVFEMRFAKM ; _entity_poly.pdbx_seq_one_letter_code_can ;SHMEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSN CYKYNPPDHEVVAMARKLQDVFEMRFAKM ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2-methyl-5-(methylamino)-6-phenylpyridazin-3(2H)-one' 89J 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 HIS n 1 3 MET n 1 4 GLU n 1 5 GLN n 1 6 LEU n 1 7 LYS n 1 8 CYS n 1 9 CYS n 1 10 SER n 1 11 GLY n 1 12 ILE n 1 13 LEU n 1 14 LYS n 1 15 GLU n 1 16 MET n 1 17 PHE n 1 18 ALA n 1 19 LYS n 1 20 LYS n 1 21 HIS n 1 22 ALA n 1 23 ALA n 1 24 TYR n 1 25 ALA n 1 26 TRP n 1 27 PRO n 1 28 PHE n 1 29 TYR n 1 30 LYS n 1 31 PRO n 1 32 VAL n 1 33 ASP n 1 34 VAL n 1 35 GLU n 1 36 ALA n 1 37 LEU n 1 38 GLY n 1 39 LEU n 1 40 HIS n 1 41 ASP n 1 42 TYR n 1 43 CYS n 1 44 ASP n 1 45 ILE n 1 46 ILE n 1 47 LYS n 1 48 HIS n 1 49 PRO n 1 50 MET n 1 51 ASP n 1 52 MET n 1 53 SER n 1 54 THR n 1 55 ILE n 1 56 LYS n 1 57 SER n 1 58 LYS n 1 59 LEU n 1 60 GLU n 1 61 ALA n 1 62 ARG n 1 63 GLU n 1 64 TYR n 1 65 ARG n 1 66 ASP n 1 67 ALA n 1 68 GLN n 1 69 GLU n 1 70 PHE n 1 71 GLY n 1 72 ALA n 1 73 ASP n 1 74 VAL n 1 75 ARG n 1 76 LEU n 1 77 MET n 1 78 PHE n 1 79 SER n 1 80 ASN n 1 81 CYS n 1 82 TYR n 1 83 LYS n 1 84 TYR n 1 85 ASN n 1 86 PRO n 1 87 PRO n 1 88 ASP n 1 89 HIS n 1 90 GLU n 1 91 VAL n 1 92 VAL n 1 93 ALA n 1 94 MET n 1 95 ALA n 1 96 ARG n 1 97 LYS n 1 98 LEU n 1 99 GLN n 1 100 ASP n 1 101 VAL n 1 102 PHE n 1 103 GLU n 1 104 MET n 1 105 ARG n 1 106 PHE n 1 107 ALA n 1 108 LYS n 1 109 MET n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 109 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BRD4, HUNK1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli-Pichia pastoris shuttle vector pPpARG4' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 1182032 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 89J non-polymer . '2-methyl-5-(methylamino)-6-phenylpyridazin-3(2H)-one' ? 'C12 H13 N3 O' 215.251 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 349 ? ? ? A . n A 1 2 HIS 2 350 350 HIS HIS A . n A 1 3 MET 3 351 351 MET MET A . n A 1 4 GLU 4 352 352 GLU GLU A . n A 1 5 GLN 5 353 353 GLN GLN A . n A 1 6 LEU 6 354 354 LEU LEU A . n A 1 7 LYS 7 355 355 LYS LYS A . n A 1 8 CYS 8 356 356 CYS CYS A . n A 1 9 CYS 9 357 357 CYS CYS A . n A 1 10 SER 10 358 358 SER SER A . n A 1 11 GLY 11 359 359 GLY GLY A . n A 1 12 ILE 12 360 360 ILE ILE A . n A 1 13 LEU 13 361 361 LEU LEU A . n A 1 14 LYS 14 362 362 LYS LYS A . n A 1 15 GLU 15 363 363 GLU GLU A . n A 1 16 MET 16 364 364 MET MET A . n A 1 17 PHE 17 365 365 PHE PHE A . n A 1 18 ALA 18 366 366 ALA ALA A . n A 1 19 LYS 19 367 367 LYS LYS A . n A 1 20 LYS 20 368 368 LYS LYS A . n A 1 21 HIS 21 369 369 HIS HIS A . n A 1 22 ALA 22 370 370 ALA ALA A . n A 1 23 ALA 23 371 371 ALA ALA A . n A 1 24 TYR 24 372 372 TYR TYR A . n A 1 25 ALA 25 373 373 ALA ALA A . n A 1 26 TRP 26 374 374 TRP TRP A . n A 1 27 PRO 27 375 375 PRO PRO A . n A 1 28 PHE 28 376 376 PHE PHE A . n A 1 29 TYR 29 377 377 TYR TYR A . n A 1 30 LYS 30 378 378 LYS LYS A . n A 1 31 PRO 31 379 379 PRO PRO A . n A 1 32 VAL 32 380 380 VAL VAL A . n A 1 33 ASP 33 381 381 ASP ASP A . n A 1 34 VAL 34 382 382 VAL VAL A . n A 1 35 GLU 35 383 383 GLU GLU A . n A 1 36 ALA 36 384 384 ALA ALA A . n A 1 37 LEU 37 385 385 LEU LEU A . n A 1 38 GLY 38 386 386 GLY GLY A . n A 1 39 LEU 39 387 387 LEU LEU A . n A 1 40 HIS 40 388 388 HIS HIS A . n A 1 41 ASP 41 389 389 ASP ASP A . n A 1 42 TYR 42 390 390 TYR TYR A . n A 1 43 CYS 43 391 391 CYS CYS A . n A 1 44 ASP 44 392 392 ASP ASP A . n A 1 45 ILE 45 393 393 ILE ILE A . n A 1 46 ILE 46 394 394 ILE ILE A . n A 1 47 LYS 47 395 395 LYS LYS A . n A 1 48 HIS 48 396 396 HIS HIS A . n A 1 49 PRO 49 397 397 PRO PRO A . n A 1 50 MET 50 398 398 MET MET A . n A 1 51 ASP 51 399 399 ASP ASP A . n A 1 52 MET 52 400 400 MET MET A . n A 1 53 SER 53 401 401 SER SER A . n A 1 54 THR 54 402 402 THR THR A . n A 1 55 ILE 55 403 403 ILE ILE A . n A 1 56 LYS 56 404 404 LYS LYS A . n A 1 57 SER 57 405 405 SER SER A . n A 1 58 LYS 58 406 406 LYS LYS A . n A 1 59 LEU 59 407 407 LEU LEU A . n A 1 60 GLU 60 408 408 GLU GLU A . n A 1 61 ALA 61 409 409 ALA ALA A . n A 1 62 ARG 62 410 410 ARG ARG A . n A 1 63 GLU 63 411 411 GLU GLU A . n A 1 64 TYR 64 412 412 TYR TYR A . n A 1 65 ARG 65 413 413 ARG ARG A . n A 1 66 ASP 66 414 414 ASP ASP A . n A 1 67 ALA 67 415 415 ALA ALA A . n A 1 68 GLN 68 416 416 GLN GLN A . n A 1 69 GLU 69 417 417 GLU GLU A . n A 1 70 PHE 70 418 418 PHE PHE A . n A 1 71 GLY 71 419 419 GLY GLY A . n A 1 72 ALA 72 420 420 ALA ALA A . n A 1 73 ASP 73 421 421 ASP ASP A . n A 1 74 VAL 74 422 422 VAL VAL A . n A 1 75 ARG 75 423 423 ARG ARG A . n A 1 76 LEU 76 424 424 LEU LEU A . n A 1 77 MET 77 425 425 MET MET A . n A 1 78 PHE 78 426 426 PHE PHE A . n A 1 79 SER 79 427 427 SER SER A . n A 1 80 ASN 80 428 428 ASN ASN A . n A 1 81 CYS 81 429 429 CYS CYS A . n A 1 82 TYR 82 430 430 TYR TYR A . n A 1 83 LYS 83 431 431 LYS LYS A . n A 1 84 TYR 84 432 432 TYR TYR A . n A 1 85 ASN 85 433 433 ASN ASN A . n A 1 86 PRO 86 434 434 PRO PRO A . n A 1 87 PRO 87 435 435 PRO PRO A . n A 1 88 ASP 88 436 436 ASP ASP A . n A 1 89 HIS 89 437 437 HIS HIS A . n A 1 90 GLU 90 438 438 GLU GLU A . n A 1 91 VAL 91 439 439 VAL VAL A . n A 1 92 VAL 92 440 440 VAL VAL A . n A 1 93 ALA 93 441 441 ALA ALA A . n A 1 94 MET 94 442 442 MET MET A . n A 1 95 ALA 95 443 443 ALA ALA A . n A 1 96 ARG 96 444 444 ARG ARG A . n A 1 97 LYS 97 445 445 LYS LYS A . n A 1 98 LEU 98 446 446 LEU LEU A . n A 1 99 GLN 99 447 447 GLN GLN A . n A 1 100 ASP 100 448 448 ASP ASP A . n A 1 101 VAL 101 449 449 VAL VAL A . n A 1 102 PHE 102 450 450 PHE PHE A . n A 1 103 GLU 103 451 451 GLU GLU A . n A 1 104 MET 104 452 452 MET MET A . n A 1 105 ARG 105 453 453 ARG ARG A . n A 1 106 PHE 106 454 454 PHE PHE A . n A 1 107 ALA 107 455 455 ALA ALA A . n A 1 108 LYS 108 456 456 LYS LYS A . n A 1 109 MET 109 457 457 MET MET A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 89J 1 501 1 89J LIG A . C 3 HOH 1 601 139 HOH HOH A . C 3 HOH 2 602 6 HOH HOH A . C 3 HOH 3 603 1 HOH HOH A . C 3 HOH 4 604 16 HOH HOH A . C 3 HOH 5 605 18 HOH HOH A . C 3 HOH 6 606 59 HOH HOH A . C 3 HOH 7 607 62 HOH HOH A . C 3 HOH 8 608 32 HOH HOH A . C 3 HOH 9 609 27 HOH HOH A . C 3 HOH 10 610 61 HOH HOH A . C 3 HOH 11 611 121 HOH HOH A . C 3 HOH 12 612 143 HOH HOH A . C 3 HOH 13 613 28 HOH HOH A . C 3 HOH 14 614 145 HOH HOH A . C 3 HOH 15 615 42 HOH HOH A . C 3 HOH 16 616 64 HOH HOH A . C 3 HOH 17 617 9 HOH HOH A . C 3 HOH 18 618 171 HOH HOH A . C 3 HOH 19 619 168 HOH HOH A . C 3 HOH 20 620 175 HOH HOH A . C 3 HOH 21 621 164 HOH HOH A . C 3 HOH 22 622 115 HOH HOH A . C 3 HOH 23 623 68 HOH HOH A . C 3 HOH 24 624 161 HOH HOH A . C 3 HOH 25 625 136 HOH HOH A . C 3 HOH 26 626 119 HOH HOH A . C 3 HOH 27 627 78 HOH HOH A . C 3 HOH 28 628 162 HOH HOH A . C 3 HOH 29 629 94 HOH HOH A . C 3 HOH 30 630 93 HOH HOH A . C 3 HOH 31 631 11 HOH HOH A . C 3 HOH 32 632 113 HOH HOH A . C 3 HOH 33 633 150 HOH HOH A . C 3 HOH 34 634 137 HOH HOH A . C 3 HOH 35 635 17 HOH HOH A . C 3 HOH 36 636 90 HOH HOH A . C 3 HOH 37 637 178 HOH HOH A . C 3 HOH 38 638 12 HOH HOH A . C 3 HOH 39 639 55 HOH HOH A . C 3 HOH 40 640 85 HOH HOH A . C 3 HOH 41 641 37 HOH HOH A . C 3 HOH 42 642 193 HOH HOH A . C 3 HOH 43 643 74 HOH HOH A . C 3 HOH 44 644 140 HOH HOH A . C 3 HOH 45 645 36 HOH HOH A . C 3 HOH 46 646 88 HOH HOH A . C 3 HOH 47 647 129 HOH HOH A . C 3 HOH 48 648 165 HOH HOH A . C 3 HOH 49 649 102 HOH HOH A . C 3 HOH 50 650 142 HOH HOH A . C 3 HOH 51 651 56 HOH HOH A . C 3 HOH 52 652 35 HOH HOH A . C 3 HOH 53 653 54 HOH HOH A . C 3 HOH 54 654 66 HOH HOH A . C 3 HOH 55 655 95 HOH HOH A . C 3 HOH 56 656 5 HOH HOH A . C 3 HOH 57 657 15 HOH HOH A . C 3 HOH 58 658 75 HOH HOH A . C 3 HOH 59 659 67 HOH HOH A . C 3 HOH 60 660 25 HOH HOH A . C 3 HOH 61 661 21 HOH HOH A . C 3 HOH 62 662 14 HOH HOH A . C 3 HOH 63 663 133 HOH HOH A . C 3 HOH 64 664 3 HOH HOH A . C 3 HOH 65 665 44 HOH HOH A . C 3 HOH 66 666 194 HOH HOH A . C 3 HOH 67 667 29 HOH HOH A . C 3 HOH 68 668 57 HOH HOH A . C 3 HOH 69 669 8 HOH HOH A . C 3 HOH 70 670 105 HOH HOH A . C 3 HOH 71 671 43 HOH HOH A . C 3 HOH 72 672 146 HOH HOH A . C 3 HOH 73 673 22 HOH HOH A . C 3 HOH 74 674 187 HOH HOH A . C 3 HOH 75 675 106 HOH HOH A . C 3 HOH 76 676 181 HOH HOH A . C 3 HOH 77 677 174 HOH HOH A . C 3 HOH 78 678 71 HOH HOH A . C 3 HOH 79 679 149 HOH HOH A . C 3 HOH 80 680 144 HOH HOH A . C 3 HOH 81 681 65 HOH HOH A . C 3 HOH 82 682 31 HOH HOH A . C 3 HOH 83 683 13 HOH HOH A . C 3 HOH 84 684 39 HOH HOH A . C 3 HOH 85 685 172 HOH HOH A . C 3 HOH 86 686 109 HOH HOH A . C 3 HOH 87 687 38 HOH HOH A . C 3 HOH 88 688 53 HOH HOH A . C 3 HOH 89 689 33 HOH HOH A . C 3 HOH 90 690 20 HOH HOH A . C 3 HOH 91 691 154 HOH HOH A . C 3 HOH 92 692 81 HOH HOH A . C 3 HOH 93 693 99 HOH HOH A . C 3 HOH 94 694 19 HOH HOH A . C 3 HOH 95 695 4 HOH HOH A . C 3 HOH 96 696 51 HOH HOH A . C 3 HOH 97 697 60 HOH HOH A . C 3 HOH 98 698 34 HOH HOH A . C 3 HOH 99 699 24 HOH HOH A . C 3 HOH 100 700 123 HOH HOH A . C 3 HOH 101 701 108 HOH HOH A . C 3 HOH 102 702 72 HOH HOH A . C 3 HOH 103 703 160 HOH HOH A . C 3 HOH 104 704 79 HOH HOH A . C 3 HOH 105 705 63 HOH HOH A . C 3 HOH 106 706 196 HOH HOH A . C 3 HOH 107 707 49 HOH HOH A . C 3 HOH 108 708 2 HOH HOH A . C 3 HOH 109 709 30 HOH HOH A . C 3 HOH 110 710 41 HOH HOH A . C 3 HOH 111 711 7 HOH HOH A . C 3 HOH 112 712 10 HOH HOH A . C 3 HOH 113 713 48 HOH HOH A . C 3 HOH 114 714 141 HOH HOH A . C 3 HOH 115 715 126 HOH HOH A . C 3 HOH 116 716 69 HOH HOH A . C 3 HOH 117 717 167 HOH HOH A . C 3 HOH 118 718 110 HOH HOH A . C 3 HOH 119 719 87 HOH HOH A . C 3 HOH 120 720 98 HOH HOH A . C 3 HOH 121 721 80 HOH HOH A . C 3 HOH 122 722 26 HOH HOH A . C 3 HOH 123 723 128 HOH HOH A . C 3 HOH 124 724 158 HOH HOH A . C 3 HOH 125 725 58 HOH HOH A . C 3 HOH 126 726 183 HOH HOH A . C 3 HOH 127 727 50 HOH HOH A . C 3 HOH 128 728 40 HOH HOH A . C 3 HOH 129 729 135 HOH HOH A . C 3 HOH 130 730 91 HOH HOH A . C 3 HOH 131 731 117 HOH HOH A . C 3 HOH 132 732 77 HOH HOH A . C 3 HOH 133 733 166 HOH HOH A . C 3 HOH 134 734 190 HOH HOH A . C 3 HOH 135 735 151 HOH HOH A . C 3 HOH 136 736 112 HOH HOH A . C 3 HOH 137 737 84 HOH HOH A . C 3 HOH 138 738 23 HOH HOH A . C 3 HOH 139 739 45 HOH HOH A . C 3 HOH 140 740 76 HOH HOH A . C 3 HOH 141 741 46 HOH HOH A . C 3 HOH 142 742 138 HOH HOH A . C 3 HOH 143 743 134 HOH HOH A . C 3 HOH 144 744 186 HOH HOH A . C 3 HOH 145 745 159 HOH HOH A . C 3 HOH 146 746 155 HOH HOH A . C 3 HOH 147 747 188 HOH HOH A . C 3 HOH 148 748 86 HOH HOH A . C 3 HOH 149 749 169 HOH HOH A . C 3 HOH 150 750 89 HOH HOH A . C 3 HOH 151 751 191 HOH HOH A . C 3 HOH 152 752 122 HOH HOH A . C 3 HOH 153 753 114 HOH HOH A . C 3 HOH 154 754 130 HOH HOH A . C 3 HOH 155 755 101 HOH HOH A . C 3 HOH 156 756 182 HOH HOH A . C 3 HOH 157 757 96 HOH HOH A . C 3 HOH 158 758 125 HOH HOH A . C 3 HOH 159 759 176 HOH HOH A . C 3 HOH 160 760 131 HOH HOH A . C 3 HOH 161 761 127 HOH HOH A . C 3 HOH 162 762 157 HOH HOH A . C 3 HOH 163 763 111 HOH HOH A . C 3 HOH 164 764 82 HOH HOH A . C 3 HOH 165 765 103 HOH HOH A . C 3 HOH 166 766 116 HOH HOH A . C 3 HOH 167 767 195 HOH HOH A . C 3 HOH 168 768 153 HOH HOH A . C 3 HOH 169 769 73 HOH HOH A . C 3 HOH 170 770 179 HOH HOH A . C 3 HOH 171 771 83 HOH HOH A . C 3 HOH 172 772 148 HOH HOH A . C 3 HOH 173 773 52 HOH HOH A . C 3 HOH 174 774 70 HOH HOH A . C 3 HOH 175 775 173 HOH HOH A . C 3 HOH 176 776 152 HOH HOH A . C 3 HOH 177 777 97 HOH HOH A . C 3 HOH 178 778 163 HOH HOH A . C 3 HOH 179 779 124 HOH HOH A . C 3 HOH 180 780 100 HOH HOH A . C 3 HOH 181 781 177 HOH HOH A . C 3 HOH 182 782 92 HOH HOH A . C 3 HOH 183 783 180 HOH HOH A . C 3 HOH 184 784 120 HOH HOH A . C 3 HOH 185 785 192 HOH HOH A . C 3 HOH 186 786 156 HOH HOH A . C 3 HOH 187 787 170 HOH HOH A . C 3 HOH 188 788 107 HOH HOH A . C 3 HOH 189 789 132 HOH HOH A . C 3 HOH 190 790 185 HOH HOH A . C 3 HOH 191 791 47 HOH HOH A . C 3 HOH 192 792 104 HOH HOH A . C 3 HOH 193 793 118 HOH HOH A . C 3 HOH 194 794 189 HOH HOH A . C 3 HOH 195 795 147 HOH HOH A . C 3 HOH 196 796 184 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER-TNT ? ? ? . 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 2.11.7 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? 3.20 3 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5UF0 _cell.details ? _cell.formula_units_Z ? _cell.length_a 57.049 _cell.length_a_esd ? _cell.length_b 73.030 _cell.length_b_esd ? _cell.length_c 33.596 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UF0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5UF0 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.75 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 55.29 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;Protein buffer : PH 7.5 10 mM HEPES 100 mM NaCl 5mM DTT Crystallization : 15 %(V/V) Ethanol Tris PH 7.0 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 300K' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2010-08-09 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5UF0 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.35 _reflns.d_resolution_low 73.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 31000 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 19.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high . _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -5.7265 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 3.7118 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 2.0147 _refine.B_iso_max 86.580 _refine.B_iso_mean 25.0400 _refine.B_iso_min 12.330 _refine.correlation_coeff_Fo_to_Fc 0.9590 _refine.correlation_coeff_Fo_to_Fc_free 0.9590 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5UF0 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.3500 _refine.ls_d_res_low 36.5100 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 30952 _refine.ls_number_reflns_R_free 1565 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.0000 _refine.ls_percent_reflns_R_free 5.0600 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1800 _refine.ls_R_factor_R_free 0.2010 _refine.ls_R_factor_R_free_error 0.02 _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1790 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model Apo-BRD4_BD2 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.0510 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.0570 _refine.pdbx_overall_SU_R_Blow_DPI 0.0560 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.0490 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 5UF0 _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.170 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.3500 _refine_hist.d_res_low 36.5100 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 196 _refine_hist.number_atoms_total 1098 _refine_hist.pdbx_number_residues_total 108 _refine_hist.pdbx_B_iso_mean_ligand 21.63 _refine_hist.pdbx_B_iso_mean_solvent 39.52 _refine_hist.pdbx_number_atoms_protein 886 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? ? ? 333 ? t_dihedral_angle_d 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? 21 ? t_trig_c_planes 2.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 138 ? t_gen_planes 5.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 931 ? t_it 20.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_nbd ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_improper_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_pseud_angle ? ? 'X-RAY DIFFRACTION' ? ? ? 110 ? t_chiral_improper_torsion 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_sum_occupancies ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_distance ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_angle ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 1226 ? t_ideal_dist_contact 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? 0.010 ? 931 ? t_bond_d 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 0.960 ? 1247 ? t_angle_deg 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 3.400 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 16.120 ? ? ? t_other_torsion ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.3500 _refine_ls_shell.d_res_low 1.3900 _refine_ls_shell.number_reflns_all 2358 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 126 _refine_ls_shell.number_reflns_R_work 2232 _refine_ls_shell.percent_reflns_obs 82.6600 _refine_ls_shell.percent_reflns_R_free 5.3400 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2510 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2270 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 16 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5UF0 _struct.title BRD4_BD2-A-35165 _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5UF0 _struct_keywords.text 'Helix bundle, SIGNALING PROTEIN-INHIBITOR complex' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN/INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BRD4_HUMAN _struct_ref.pdbx_db_accession O60885 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYK YNPPDHEVVAMARKLQDVFEMRFAKM ; _struct_ref.pdbx_align_begin 352 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5UF0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 109 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O60885 _struct_ref_seq.db_align_beg 352 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 457 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 352 _struct_ref_seq.pdbx_auth_seq_align_end 457 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5UF0 SER A 1 ? UNP O60885 ? ? 'expression tag' 349 1 1 5UF0 HIS A 2 ? UNP O60885 ? ? 'expression tag' 350 2 1 5UF0 MET A 3 ? UNP O60885 ? ? 'expression tag' 351 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 6890 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 HIS A 2 ? PHE A 17 ? HIS A 350 PHE A 365 1 ? 16 HELX_P HELX_P2 AA2 ALA A 18 ? LYS A 20 ? ALA A 366 LYS A 368 5 ? 3 HELX_P HELX_P3 AA3 HIS A 21 ? TRP A 26 ? HIS A 369 TRP A 374 1 ? 6 HELX_P HELX_P4 AA4 PRO A 27 ? TYR A 29 ? PRO A 375 TYR A 377 5 ? 3 HELX_P HELX_P5 AA5 ASP A 41 ? ILE A 46 ? ASP A 389 ILE A 394 1 ? 6 HELX_P HELX_P6 AA6 ASP A 51 ? ALA A 61 ? ASP A 399 ALA A 409 1 ? 11 HELX_P HELX_P7 AA7 ASP A 66 ? ASN A 85 ? ASP A 414 ASN A 433 1 ? 20 HELX_P HELX_P8 AA8 HIS A 89 ? MET A 109 ? HIS A 437 MET A 457 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 89J _struct_site.pdbx_auth_seq_id 501 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'binding site for residue 89J A 501' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 VAL A 32 ? VAL A 380 . ? 1_555 ? 2 AC1 6 CYS A 81 ? CYS A 429 . ? 1_555 ? 3 AC1 6 ASN A 85 ? ASN A 433 . ? 1_555 ? 4 AC1 6 HOH C . ? HOH A 601 . ? 1_555 ? 5 AC1 6 HOH C . ? HOH A 644 . ? 1_555 ? 6 AC1 6 HOH C . ? HOH A 714 . ? 1_555 ? # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 795 ? 6.22 . 2 1 O ? A HOH 796 ? 7.17 . # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id SER _pdbx_unobs_or_zero_occ_residues.auth_seq_id 349 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id SER _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 89J C4 C Y N 1 89J C5 C Y N 2 89J C6 C Y N 3 89J C7 C N N 4 89J C8 C N N 5 89J C10 C N N 6 89J C1 C Y N 7 89J C2 C Y N 8 89J C3 C Y N 9 89J C9 C N N 10 89J C11 C N N 11 89J C12 C N N 12 89J N13 N N N 13 89J N14 N N N 14 89J N15 N N N 15 89J O16 O N N 16 89J H1 H N N 17 89J H2 H N N 18 89J H3 H N N 19 89J H4 H N N 20 89J H5 H N N 21 89J H6 H N N 22 89J H7 H N N 23 89J H8 H N N 24 89J H9 H N N 25 89J H10 H N N 26 89J H11 H N N 27 89J H12 H N N 28 89J H13 H N N 29 ALA N N N N 30 ALA CA C N S 31 ALA C C N N 32 ALA O O N N 33 ALA CB C N N 34 ALA OXT O N N 35 ALA H H N N 36 ALA H2 H N N 37 ALA HA H N N 38 ALA HB1 H N N 39 ALA HB2 H N N 40 ALA HB3 H N N 41 ALA HXT H N N 42 ARG N N N N 43 ARG CA C N S 44 ARG C C N N 45 ARG O O N N 46 ARG CB C N N 47 ARG CG C N N 48 ARG CD C N N 49 ARG NE N N N 50 ARG CZ C N N 51 ARG NH1 N N N 52 ARG NH2 N N N 53 ARG OXT O N N 54 ARG H H N N 55 ARG H2 H N N 56 ARG HA H N N 57 ARG HB2 H N N 58 ARG HB3 H N N 59 ARG HG2 H N N 60 ARG HG3 H N N 61 ARG HD2 H N N 62 ARG HD3 H N N 63 ARG HE H N N 64 ARG HH11 H N N 65 ARG HH12 H N N 66 ARG HH21 H N N 67 ARG HH22 H N N 68 ARG HXT H N N 69 ASN N N N N 70 ASN CA C N S 71 ASN C C N N 72 ASN O O N N 73 ASN CB C N N 74 ASN CG C N N 75 ASN OD1 O N N 76 ASN ND2 N N N 77 ASN OXT O N N 78 ASN H H N N 79 ASN H2 H N N 80 ASN HA H N N 81 ASN HB2 H N N 82 ASN HB3 H N N 83 ASN HD21 H N N 84 ASN HD22 H N N 85 ASN HXT H N N 86 ASP N N N N 87 ASP CA C N S 88 ASP C C N N 89 ASP O O N N 90 ASP CB C N N 91 ASP CG C N N 92 ASP OD1 O N N 93 ASP OD2 O N N 94 ASP OXT O N N 95 ASP H H N N 96 ASP H2 H N N 97 ASP HA H N N 98 ASP HB2 H N N 99 ASP HB3 H N N 100 ASP HD2 H N N 101 ASP HXT H N N 102 CYS N N N N 103 CYS CA C N R 104 CYS C C N N 105 CYS O O N N 106 CYS CB C N N 107 CYS SG S N N 108 CYS OXT O N N 109 CYS H H N N 110 CYS H2 H N N 111 CYS HA H N N 112 CYS HB2 H N N 113 CYS HB3 H N N 114 CYS HG H N N 115 CYS HXT H N N 116 GLN N N N N 117 GLN CA C N S 118 GLN C C N N 119 GLN O O N N 120 GLN CB C N N 121 GLN CG C N N 122 GLN CD C N N 123 GLN OE1 O N N 124 GLN NE2 N N N 125 GLN OXT O N N 126 GLN H H N N 127 GLN H2 H N N 128 GLN HA H N N 129 GLN HB2 H N N 130 GLN HB3 H N N 131 GLN HG2 H N N 132 GLN HG3 H N N 133 GLN HE21 H N N 134 GLN HE22 H N N 135 GLN HXT H N N 136 GLU N N N N 137 GLU CA C N S 138 GLU C C N N 139 GLU O O N N 140 GLU CB C N N 141 GLU CG C N N 142 GLU CD C N N 143 GLU OE1 O N N 144 GLU OE2 O N N 145 GLU OXT O N N 146 GLU H H N N 147 GLU H2 H N N 148 GLU HA H N N 149 GLU HB2 H N N 150 GLU HB3 H N N 151 GLU HG2 H N N 152 GLU HG3 H N N 153 GLU HE2 H N N 154 GLU HXT H N N 155 GLY N N N N 156 GLY CA C N N 157 GLY C C N N 158 GLY O O N N 159 GLY OXT O N N 160 GLY H H N N 161 GLY H2 H N N 162 GLY HA2 H N N 163 GLY HA3 H N N 164 GLY HXT H N N 165 HIS N N N N 166 HIS CA C N S 167 HIS C C N N 168 HIS O O N N 169 HIS CB C N N 170 HIS CG C Y N 171 HIS ND1 N Y N 172 HIS CD2 C Y N 173 HIS CE1 C Y N 174 HIS NE2 N Y N 175 HIS OXT O N N 176 HIS H H N N 177 HIS H2 H N N 178 HIS HA H N N 179 HIS HB2 H N N 180 HIS HB3 H N N 181 HIS HD1 H N N 182 HIS HD2 H N N 183 HIS HE1 H N N 184 HIS HE2 H N N 185 HIS HXT H N N 186 HOH O O N N 187 HOH H1 H N N 188 HOH H2 H N N 189 ILE N N N N 190 ILE CA C N S 191 ILE C C N N 192 ILE O O N N 193 ILE CB C N S 194 ILE CG1 C N N 195 ILE CG2 C N N 196 ILE CD1 C N N 197 ILE OXT O N N 198 ILE H H N N 199 ILE H2 H N N 200 ILE HA H N N 201 ILE HB H N N 202 ILE HG12 H N N 203 ILE HG13 H N N 204 ILE HG21 H N N 205 ILE HG22 H N N 206 ILE HG23 H N N 207 ILE HD11 H N N 208 ILE HD12 H N N 209 ILE HD13 H N N 210 ILE HXT H N N 211 LEU N N N N 212 LEU CA C N S 213 LEU C C N N 214 LEU O O N N 215 LEU CB C N N 216 LEU CG C N N 217 LEU CD1 C N N 218 LEU CD2 C N N 219 LEU OXT O N N 220 LEU H H N N 221 LEU H2 H N N 222 LEU HA H N N 223 LEU HB2 H N N 224 LEU HB3 H N N 225 LEU HG H N N 226 LEU HD11 H N N 227 LEU HD12 H N N 228 LEU HD13 H N N 229 LEU HD21 H N N 230 LEU HD22 H N N 231 LEU HD23 H N N 232 LEU HXT H N N 233 LYS N N N N 234 LYS CA C N S 235 LYS C C N N 236 LYS O O N N 237 LYS CB C N N 238 LYS CG C N N 239 LYS CD C N N 240 LYS CE C N N 241 LYS NZ N N N 242 LYS OXT O N N 243 LYS H H N N 244 LYS H2 H N N 245 LYS HA H N N 246 LYS HB2 H N N 247 LYS HB3 H N N 248 LYS HG2 H N N 249 LYS HG3 H N N 250 LYS HD2 H N N 251 LYS HD3 H N N 252 LYS HE2 H N N 253 LYS HE3 H N N 254 LYS HZ1 H N N 255 LYS HZ2 H N N 256 LYS HZ3 H N N 257 LYS HXT H N N 258 MET N N N N 259 MET CA C N S 260 MET C C N N 261 MET O O N N 262 MET CB C N N 263 MET CG C N N 264 MET SD S N N 265 MET CE C N N 266 MET OXT O N N 267 MET H H N N 268 MET H2 H N N 269 MET HA H N N 270 MET HB2 H N N 271 MET HB3 H N N 272 MET HG2 H N N 273 MET HG3 H N N 274 MET HE1 H N N 275 MET HE2 H N N 276 MET HE3 H N N 277 MET HXT H N N 278 PHE N N N N 279 PHE CA C N S 280 PHE C C N N 281 PHE O O N N 282 PHE CB C N N 283 PHE CG C Y N 284 PHE CD1 C Y N 285 PHE CD2 C Y N 286 PHE CE1 C Y N 287 PHE CE2 C Y N 288 PHE CZ C Y N 289 PHE OXT O N N 290 PHE H H N N 291 PHE H2 H N N 292 PHE HA H N N 293 PHE HB2 H N N 294 PHE HB3 H N N 295 PHE HD1 H N N 296 PHE HD2 H N N 297 PHE HE1 H N N 298 PHE HE2 H N N 299 PHE HZ H N N 300 PHE HXT H N N 301 PRO N N N N 302 PRO CA C N S 303 PRO C C N N 304 PRO O O N N 305 PRO CB C N N 306 PRO CG C N N 307 PRO CD C N N 308 PRO OXT O N N 309 PRO H H N N 310 PRO HA H N N 311 PRO HB2 H N N 312 PRO HB3 H N N 313 PRO HG2 H N N 314 PRO HG3 H N N 315 PRO HD2 H N N 316 PRO HD3 H N N 317 PRO HXT H N N 318 SER N N N N 319 SER CA C N S 320 SER C C N N 321 SER O O N N 322 SER CB C N N 323 SER OG O N N 324 SER OXT O N N 325 SER H H N N 326 SER H2 H N N 327 SER HA H N N 328 SER HB2 H N N 329 SER HB3 H N N 330 SER HG H N N 331 SER HXT H N N 332 THR N N N N 333 THR CA C N S 334 THR C C N N 335 THR O O N N 336 THR CB C N R 337 THR OG1 O N N 338 THR CG2 C N N 339 THR OXT O N N 340 THR H H N N 341 THR H2 H N N 342 THR HA H N N 343 THR HB H N N 344 THR HG1 H N N 345 THR HG21 H N N 346 THR HG22 H N N 347 THR HG23 H N N 348 THR HXT H N N 349 TRP N N N N 350 TRP CA C N S 351 TRP C C N N 352 TRP O O N N 353 TRP CB C N N 354 TRP CG C Y N 355 TRP CD1 C Y N 356 TRP CD2 C Y N 357 TRP NE1 N Y N 358 TRP CE2 C Y N 359 TRP CE3 C Y N 360 TRP CZ2 C Y N 361 TRP CZ3 C Y N 362 TRP CH2 C Y N 363 TRP OXT O N N 364 TRP H H N N 365 TRP H2 H N N 366 TRP HA H N N 367 TRP HB2 H N N 368 TRP HB3 H N N 369 TRP HD1 H N N 370 TRP HE1 H N N 371 TRP HE3 H N N 372 TRP HZ2 H N N 373 TRP HZ3 H N N 374 TRP HH2 H N N 375 TRP HXT H N N 376 TYR N N N N 377 TYR CA C N S 378 TYR C C N N 379 TYR O O N N 380 TYR CB C N N 381 TYR CG C Y N 382 TYR CD1 C Y N 383 TYR CD2 C Y N 384 TYR CE1 C Y N 385 TYR CE2 C Y N 386 TYR CZ C Y N 387 TYR OH O N N 388 TYR OXT O N N 389 TYR H H N N 390 TYR H2 H N N 391 TYR HA H N N 392 TYR HB2 H N N 393 TYR HB3 H N N 394 TYR HD1 H N N 395 TYR HD2 H N N 396 TYR HE1 H N N 397 TYR HE2 H N N 398 TYR HH H N N 399 TYR HXT H N N 400 VAL N N N N 401 VAL CA C N S 402 VAL C C N N 403 VAL O O N N 404 VAL CB C N N 405 VAL CG1 C N N 406 VAL CG2 C N N 407 VAL OXT O N N 408 VAL H H N N 409 VAL H2 H N N 410 VAL HA H N N 411 VAL HB H N N 412 VAL HG11 H N N 413 VAL HG12 H N N 414 VAL HG13 H N N 415 VAL HG21 H N N 416 VAL HG22 H N N 417 VAL HG23 H N N 418 VAL HXT H N N 419 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 89J C11 N14 sing N N 1 89J O16 C10 doub N N 2 89J N14 C10 sing N N 3 89J N14 N13 sing N N 4 89J C10 C7 sing N N 5 89J N13 C8 doub N N 6 89J C7 C9 doub N N 7 89J C5 C3 doub Y N 8 89J C5 C6 sing Y N 9 89J C8 C9 sing N N 10 89J C8 C6 sing N N 11 89J C9 N15 sing N N 12 89J C3 C1 sing Y N 13 89J C6 C4 doub Y N 14 89J N15 C12 sing N N 15 89J C1 C2 doub Y N 16 89J C4 C2 sing Y N 17 89J C4 H1 sing N N 18 89J C5 H2 sing N N 19 89J C7 H3 sing N N 20 89J C1 H4 sing N N 21 89J C2 H5 sing N N 22 89J C3 H6 sing N N 23 89J C11 H7 sing N N 24 89J C11 H8 sing N N 25 89J C11 H9 sing N N 26 89J C12 H10 sing N N 27 89J C12 H11 sing N N 28 89J C12 H12 sing N N 29 89J N15 H13 sing N N 30 ALA N CA sing N N 31 ALA N H sing N N 32 ALA N H2 sing N N 33 ALA CA C sing N N 34 ALA CA CB sing N N 35 ALA CA HA sing N N 36 ALA C O doub N N 37 ALA C OXT sing N N 38 ALA CB HB1 sing N N 39 ALA CB HB2 sing N N 40 ALA CB HB3 sing N N 41 ALA OXT HXT sing N N 42 ARG N CA sing N N 43 ARG N H sing N N 44 ARG N H2 sing N N 45 ARG CA C sing N N 46 ARG CA CB sing N N 47 ARG CA HA sing N N 48 ARG C O doub N N 49 ARG C OXT sing N N 50 ARG CB CG sing N N 51 ARG CB HB2 sing N N 52 ARG CB HB3 sing N N 53 ARG CG CD sing N N 54 ARG CG HG2 sing N N 55 ARG CG HG3 sing N N 56 ARG CD NE sing N N 57 ARG CD HD2 sing N N 58 ARG CD HD3 sing N N 59 ARG NE CZ sing N N 60 ARG NE HE sing N N 61 ARG CZ NH1 sing N N 62 ARG CZ NH2 doub N N 63 ARG NH1 HH11 sing N N 64 ARG NH1 HH12 sing N N 65 ARG NH2 HH21 sing N N 66 ARG NH2 HH22 sing N N 67 ARG OXT HXT sing N N 68 ASN N CA sing N N 69 ASN N H sing N N 70 ASN N H2 sing N N 71 ASN CA C sing N N 72 ASN CA CB sing N N 73 ASN CA HA sing N N 74 ASN C O doub N N 75 ASN C OXT sing N N 76 ASN CB CG sing N N 77 ASN CB HB2 sing N N 78 ASN CB HB3 sing N N 79 ASN CG OD1 doub N N 80 ASN CG ND2 sing N N 81 ASN ND2 HD21 sing N N 82 ASN ND2 HD22 sing N N 83 ASN OXT HXT sing N N 84 ASP N CA sing N N 85 ASP N H sing N N 86 ASP N H2 sing N N 87 ASP CA C sing N N 88 ASP CA CB sing N N 89 ASP CA HA sing N N 90 ASP C O doub N N 91 ASP C OXT sing N N 92 ASP CB CG sing N N 93 ASP CB HB2 sing N N 94 ASP CB HB3 sing N N 95 ASP CG OD1 doub N N 96 ASP CG OD2 sing N N 97 ASP OD2 HD2 sing N N 98 ASP OXT HXT sing N N 99 CYS N CA sing N N 100 CYS N H sing N N 101 CYS N H2 sing N N 102 CYS CA C sing N N 103 CYS CA CB sing N N 104 CYS CA HA sing N N 105 CYS C O doub N N 106 CYS C OXT sing N N 107 CYS CB SG sing N N 108 CYS CB HB2 sing N N 109 CYS CB HB3 sing N N 110 CYS SG HG sing N N 111 CYS OXT HXT sing N N 112 GLN N CA sing N N 113 GLN N H sing N N 114 GLN N H2 sing N N 115 GLN CA C sing N N 116 GLN CA CB sing N N 117 GLN CA HA sing N N 118 GLN C O doub N N 119 GLN C OXT sing N N 120 GLN CB CG sing N N 121 GLN CB HB2 sing N N 122 GLN CB HB3 sing N N 123 GLN CG CD sing N N 124 GLN CG HG2 sing N N 125 GLN CG HG3 sing N N 126 GLN CD OE1 doub N N 127 GLN CD NE2 sing N N 128 GLN NE2 HE21 sing N N 129 GLN NE2 HE22 sing N N 130 GLN OXT HXT sing N N 131 GLU N CA sing N N 132 GLU N H sing N N 133 GLU N H2 sing N N 134 GLU CA C sing N N 135 GLU CA CB sing N N 136 GLU CA HA sing N N 137 GLU C O doub N N 138 GLU C OXT sing N N 139 GLU CB CG sing N N 140 GLU CB HB2 sing N N 141 GLU CB HB3 sing N N 142 GLU CG CD sing N N 143 GLU CG HG2 sing N N 144 GLU CG HG3 sing N N 145 GLU CD OE1 doub N N 146 GLU CD OE2 sing N N 147 GLU OE2 HE2 sing N N 148 GLU OXT HXT sing N N 149 GLY N CA sing N N 150 GLY N H sing N N 151 GLY N H2 sing N N 152 GLY CA C sing N N 153 GLY CA HA2 sing N N 154 GLY CA HA3 sing N N 155 GLY C O doub N N 156 GLY C OXT sing N N 157 GLY OXT HXT sing N N 158 HIS N CA sing N N 159 HIS N H sing N N 160 HIS N H2 sing N N 161 HIS CA C sing N N 162 HIS CA CB sing N N 163 HIS CA HA sing N N 164 HIS C O doub N N 165 HIS C OXT sing N N 166 HIS CB CG sing N N 167 HIS CB HB2 sing N N 168 HIS CB HB3 sing N N 169 HIS CG ND1 sing Y N 170 HIS CG CD2 doub Y N 171 HIS ND1 CE1 doub Y N 172 HIS ND1 HD1 sing N N 173 HIS CD2 NE2 sing Y N 174 HIS CD2 HD2 sing N N 175 HIS CE1 NE2 sing Y N 176 HIS CE1 HE1 sing N N 177 HIS NE2 HE2 sing N N 178 HIS OXT HXT sing N N 179 HOH O H1 sing N N 180 HOH O H2 sing N N 181 ILE N CA sing N N 182 ILE N H sing N N 183 ILE N H2 sing N N 184 ILE CA C sing N N 185 ILE CA CB sing N N 186 ILE CA HA sing N N 187 ILE C O doub N N 188 ILE C OXT sing N N 189 ILE CB CG1 sing N N 190 ILE CB CG2 sing N N 191 ILE CB HB sing N N 192 ILE CG1 CD1 sing N N 193 ILE CG1 HG12 sing N N 194 ILE CG1 HG13 sing N N 195 ILE CG2 HG21 sing N N 196 ILE CG2 HG22 sing N N 197 ILE CG2 HG23 sing N N 198 ILE CD1 HD11 sing N N 199 ILE CD1 HD12 sing N N 200 ILE CD1 HD13 sing N N 201 ILE OXT HXT sing N N 202 LEU N CA sing N N 203 LEU N H sing N N 204 LEU N H2 sing N N 205 LEU CA C sing N N 206 LEU CA CB sing N N 207 LEU CA HA sing N N 208 LEU C O doub N N 209 LEU C OXT sing N N 210 LEU CB CG sing N N 211 LEU CB HB2 sing N N 212 LEU CB HB3 sing N N 213 LEU CG CD1 sing N N 214 LEU CG CD2 sing N N 215 LEU CG HG sing N N 216 LEU CD1 HD11 sing N N 217 LEU CD1 HD12 sing N N 218 LEU CD1 HD13 sing N N 219 LEU CD2 HD21 sing N N 220 LEU CD2 HD22 sing N N 221 LEU CD2 HD23 sing N N 222 LEU OXT HXT sing N N 223 LYS N CA sing N N 224 LYS N H sing N N 225 LYS N H2 sing N N 226 LYS CA C sing N N 227 LYS CA CB sing N N 228 LYS CA HA sing N N 229 LYS C O doub N N 230 LYS C OXT sing N N 231 LYS CB CG sing N N 232 LYS CB HB2 sing N N 233 LYS CB HB3 sing N N 234 LYS CG CD sing N N 235 LYS CG HG2 sing N N 236 LYS CG HG3 sing N N 237 LYS CD CE sing N N 238 LYS CD HD2 sing N N 239 LYS CD HD3 sing N N 240 LYS CE NZ sing N N 241 LYS CE HE2 sing N N 242 LYS CE HE3 sing N N 243 LYS NZ HZ1 sing N N 244 LYS NZ HZ2 sing N N 245 LYS NZ HZ3 sing N N 246 LYS OXT HXT sing N N 247 MET N CA sing N N 248 MET N H sing N N 249 MET N H2 sing N N 250 MET CA C sing N N 251 MET CA CB sing N N 252 MET CA HA sing N N 253 MET C O doub N N 254 MET C OXT sing N N 255 MET CB CG sing N N 256 MET CB HB2 sing N N 257 MET CB HB3 sing N N 258 MET CG SD sing N N 259 MET CG HG2 sing N N 260 MET CG HG3 sing N N 261 MET SD CE sing N N 262 MET CE HE1 sing N N 263 MET CE HE2 sing N N 264 MET CE HE3 sing N N 265 MET OXT HXT sing N N 266 PHE N CA sing N N 267 PHE N H sing N N 268 PHE N H2 sing N N 269 PHE CA C sing N N 270 PHE CA CB sing N N 271 PHE CA HA sing N N 272 PHE C O doub N N 273 PHE C OXT sing N N 274 PHE CB CG sing N N 275 PHE CB HB2 sing N N 276 PHE CB HB3 sing N N 277 PHE CG CD1 doub Y N 278 PHE CG CD2 sing Y N 279 PHE CD1 CE1 sing Y N 280 PHE CD1 HD1 sing N N 281 PHE CD2 CE2 doub Y N 282 PHE CD2 HD2 sing N N 283 PHE CE1 CZ doub Y N 284 PHE CE1 HE1 sing N N 285 PHE CE2 CZ sing Y N 286 PHE CE2 HE2 sing N N 287 PHE CZ HZ sing N N 288 PHE OXT HXT sing N N 289 PRO N CA sing N N 290 PRO N CD sing N N 291 PRO N H sing N N 292 PRO CA C sing N N 293 PRO CA CB sing N N 294 PRO CA HA sing N N 295 PRO C O doub N N 296 PRO C OXT sing N N 297 PRO CB CG sing N N 298 PRO CB HB2 sing N N 299 PRO CB HB3 sing N N 300 PRO CG CD sing N N 301 PRO CG HG2 sing N N 302 PRO CG HG3 sing N N 303 PRO CD HD2 sing N N 304 PRO CD HD3 sing N N 305 PRO OXT HXT sing N N 306 SER N CA sing N N 307 SER N H sing N N 308 SER N H2 sing N N 309 SER CA C sing N N 310 SER CA CB sing N N 311 SER CA HA sing N N 312 SER C O doub N N 313 SER C OXT sing N N 314 SER CB OG sing N N 315 SER CB HB2 sing N N 316 SER CB HB3 sing N N 317 SER OG HG sing N N 318 SER OXT HXT sing N N 319 THR N CA sing N N 320 THR N H sing N N 321 THR N H2 sing N N 322 THR CA C sing N N 323 THR CA CB sing N N 324 THR CA HA sing N N 325 THR C O doub N N 326 THR C OXT sing N N 327 THR CB OG1 sing N N 328 THR CB CG2 sing N N 329 THR CB HB sing N N 330 THR OG1 HG1 sing N N 331 THR CG2 HG21 sing N N 332 THR CG2 HG22 sing N N 333 THR CG2 HG23 sing N N 334 THR OXT HXT sing N N 335 TRP N CA sing N N 336 TRP N H sing N N 337 TRP N H2 sing N N 338 TRP CA C sing N N 339 TRP CA CB sing N N 340 TRP CA HA sing N N 341 TRP C O doub N N 342 TRP C OXT sing N N 343 TRP CB CG sing N N 344 TRP CB HB2 sing N N 345 TRP CB HB3 sing N N 346 TRP CG CD1 doub Y N 347 TRP CG CD2 sing Y N 348 TRP CD1 NE1 sing Y N 349 TRP CD1 HD1 sing N N 350 TRP CD2 CE2 doub Y N 351 TRP CD2 CE3 sing Y N 352 TRP NE1 CE2 sing Y N 353 TRP NE1 HE1 sing N N 354 TRP CE2 CZ2 sing Y N 355 TRP CE3 CZ3 doub Y N 356 TRP CE3 HE3 sing N N 357 TRP CZ2 CH2 doub Y N 358 TRP CZ2 HZ2 sing N N 359 TRP CZ3 CH2 sing Y N 360 TRP CZ3 HZ3 sing N N 361 TRP CH2 HH2 sing N N 362 TRP OXT HXT sing N N 363 TYR N CA sing N N 364 TYR N H sing N N 365 TYR N H2 sing N N 366 TYR CA C sing N N 367 TYR CA CB sing N N 368 TYR CA HA sing N N 369 TYR C O doub N N 370 TYR C OXT sing N N 371 TYR CB CG sing N N 372 TYR CB HB2 sing N N 373 TYR CB HB3 sing N N 374 TYR CG CD1 doub Y N 375 TYR CG CD2 sing Y N 376 TYR CD1 CE1 sing Y N 377 TYR CD1 HD1 sing N N 378 TYR CD2 CE2 doub Y N 379 TYR CD2 HD2 sing N N 380 TYR CE1 CZ doub Y N 381 TYR CE1 HE1 sing N N 382 TYR CE2 CZ sing Y N 383 TYR CE2 HE2 sing N N 384 TYR CZ OH sing N N 385 TYR OH HH sing N N 386 TYR OXT HXT sing N N 387 VAL N CA sing N N 388 VAL N H sing N N 389 VAL N H2 sing N N 390 VAL CA C sing N N 391 VAL CA CB sing N N 392 VAL CA HA sing N N 393 VAL C O doub N N 394 VAL C OXT sing N N 395 VAL CB CG1 sing N N 396 VAL CB CG2 sing N N 397 VAL CB HB sing N N 398 VAL CG1 HG11 sing N N 399 VAL CG1 HG12 sing N N 400 VAL CG1 HG13 sing N N 401 VAL CG2 HG21 sing N N 402 VAL CG2 HG22 sing N N 403 VAL CG2 HG23 sing N N 404 VAL OXT HXT sing N N 405 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details Apo-BRD4_BD2 # _atom_sites.entry_id 5UF0 _atom_sites.fract_transf_matrix[1][1] 0.017529 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013693 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.029765 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_