HEADER PROTEIN BINDING 03-JAN-17 5UF5 TITLE STRUCTURE OF THE EFFECTOR PROTEIN SIDK (LPG0968) FROM LEGIONELLA TITLE 2 PNEUMOPHILA (DOMAIN-SWAPPED DIMER) COMPND MOL_ID: 1; COMPND 2 MOLECULE: EFFECTOR PROTEIN SIDK; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA; SOURCE 3 ORGANISM_TAXID: 446; SOURCE 4 GENE: LPG_0968; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSLOCATED EFFECTOR, V-ATPASE BINDING, ALL-ALPHA-HELICAL, PROTEIN KEYWDS 2 BINDING EXPDTA X-RAY DIFFRACTION AUTHOR K.BEYRAKHOVA,C.XU,M.T.BONIECKI,M.CYGLER REVDAT 5 06-MAR-24 5UF5 1 REMARK REVDAT 4 08-JAN-20 5UF5 1 REMARK REVDAT 3 20-SEP-17 5UF5 1 REMARK REVDAT 2 21-JUN-17 5UF5 1 JRNL REVDAT 1 10-MAY-17 5UF5 0 JRNL AUTH J.ZHAO,K.BEYRAKHOVA,Y.LIU,C.P.ALVAREZ,S.A.BUELER,L.XU,C.XU, JRNL AUTH 2 M.T.BONIECKI,V.KANELIS,Z.Q.LUO,M.CYGLER,J.L.RUBINSTEIN JRNL TITL MOLECULAR BASIS FOR THE BINDING AND MODULATION OF V-ATPASE JRNL TITL 2 BY A BACTERIAL EFFECTOR PROTEIN. JRNL REF PLOS PATHOG. V. 13 06394 2017 JRNL REFN ESSN 1553-7374 JRNL PMID 28570695 JRNL DOI 10.1371/JOURNAL.PPAT.1006394 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23532 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1178 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.3440 - 4.7983 1.00 2909 154 0.1815 0.1993 REMARK 3 2 4.7983 - 3.8092 1.00 2814 148 0.1621 0.1937 REMARK 3 3 3.8092 - 3.3278 1.00 2800 148 0.1885 0.1989 REMARK 3 4 3.3278 - 3.0236 1.00 2788 146 0.2184 0.2861 REMARK 3 5 3.0236 - 2.8069 1.00 2769 146 0.2195 0.2718 REMARK 3 6 2.8069 - 2.6415 1.00 2775 146 0.2317 0.2766 REMARK 3 7 2.6415 - 2.5092 1.00 2756 145 0.2417 0.3209 REMARK 3 8 2.5092 - 2.4000 1.00 2743 145 0.2685 0.3314 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4019 REMARK 3 ANGLE : 0.454 5452 REMARK 3 CHIRALITY : 0.035 626 REMARK 3 PLANARITY : 0.003 708 REMARK 3 DIHEDRAL : 12.069 2469 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 16 THROUGH 122) REMARK 3 ORIGIN FOR THE GROUP (A): 32.0136 -22.2897 7.6775 REMARK 3 T TENSOR REMARK 3 T11: 0.3327 T22: 0.3249 REMARK 3 T33: 0.2911 T12: -0.0384 REMARK 3 T13: 0.0205 T23: -0.0288 REMARK 3 L TENSOR REMARK 3 L11: 3.7878 L22: 3.1031 REMARK 3 L33: 3.2233 L12: -3.0128 REMARK 3 L13: 0.0189 L23: -1.1022 REMARK 3 S TENSOR REMARK 3 S11: 0.2059 S12: 0.3443 S13: 0.2056 REMARK 3 S21: -0.2686 S22: -0.1809 S23: -0.0846 REMARK 3 S31: -0.0216 S32: -0.0136 S33: -0.0393 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 123 THROUGH 256 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2697 -3.9015 20.7917 REMARK 3 T TENSOR REMARK 3 T11: 0.4376 T22: 0.4407 REMARK 3 T33: 0.4406 T12: 0.0957 REMARK 3 T13: -0.0295 T23: -0.0713 REMARK 3 L TENSOR REMARK 3 L11: 3.4346 L22: 4.7726 REMARK 3 L33: 3.7155 L12: -2.4201 REMARK 3 L13: 1.1036 L23: -0.7949 REMARK 3 S TENSOR REMARK 3 S11: -0.0517 S12: 0.0183 S13: 0.5186 REMARK 3 S21: -0.2040 S22: -0.0949 S23: 0.0705 REMARK 3 S31: -0.6128 S32: -0.8113 S33: 0.0873 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 257 THROUGH 273 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.7505 5.0107 12.5744 REMARK 3 T TENSOR REMARK 3 T11: 1.0744 T22: 1.1200 REMARK 3 T33: 1.0948 T12: 0.4560 REMARK 3 T13: -0.3821 T23: -0.3425 REMARK 3 L TENSOR REMARK 3 L11: 1.8075 L22: 4.0990 REMARK 3 L33: 4.9646 L12: 0.6190 REMARK 3 L13: -1.6846 L23: 3.0548 REMARK 3 S TENSOR REMARK 3 S11: 0.2675 S12: -0.0781 S13: 0.5325 REMARK 3 S21: -1.7590 S22: 0.0468 S23: 1.5179 REMARK 3 S31: -1.4714 S32: -1.2982 S33: -0.3065 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 16 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.6809 -20.9340 40.4775 REMARK 3 T TENSOR REMARK 3 T11: 0.4004 T22: 0.2697 REMARK 3 T33: 0.3279 T12: -0.0362 REMARK 3 T13: 0.0690 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 2.6907 L22: 1.1475 REMARK 3 L33: 2.6846 L12: -0.9298 REMARK 3 L13: 1.5316 L23: -0.6836 REMARK 3 S TENSOR REMARK 3 S11: -0.0002 S12: -0.0619 S13: 0.0268 REMARK 3 S21: 0.1180 S22: -0.0665 S23: 0.0239 REMARK 3 S31: -0.0119 S32: 0.0191 S33: 0.0721 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 123 THROUGH 256 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.9721 -36.8596 28.4589 REMARK 3 T TENSOR REMARK 3 T11: 0.3972 T22: 0.4989 REMARK 3 T33: 0.4621 T12: 0.0954 REMARK 3 T13: -0.0420 T23: -0.1071 REMARK 3 L TENSOR REMARK 3 L11: 4.3844 L22: 2.7144 REMARK 3 L33: 2.7978 L12: -1.6252 REMARK 3 L13: 1.4501 L23: -0.2450 REMARK 3 S TENSOR REMARK 3 S11: -0.0123 S12: 0.0091 S13: -0.0636 REMARK 3 S21: 0.3880 S22: 0.2736 S23: -0.6428 REMARK 3 S31: 0.1384 S32: 0.5714 S33: -0.1827 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 257 THROUGH 273 ) REMARK 3 ORIGIN FOR THE GROUP (A): 69.1887 -50.1957 36.9035 REMARK 3 T TENSOR REMARK 3 T11: 1.0030 T22: 0.7252 REMARK 3 T33: 1.1495 T12: 0.2215 REMARK 3 T13: -0.4795 T23: -0.2357 REMARK 3 L TENSOR REMARK 3 L11: 6.3381 L22: 4.7280 REMARK 3 L33: 0.5432 L12: 1.5370 REMARK 3 L13: -0.7003 L23: 1.2473 REMARK 3 S TENSOR REMARK 3 S11: 0.9610 S12: -0.1022 S13: -1.1630 REMARK 3 S21: 1.1814 S22: -0.2174 S23: -0.5625 REMARK 3 S31: 1.3497 S32: 1.0011 S33: -0.7482 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UF5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1000225681. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23542 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 45.340 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.12500 REMARK 200 R SYM (I) : 0.11500 REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 1.05000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.980 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: PLATES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CACODYLATE TRIHYDRATE PH REMARK 280 6.5, 0.2 M MAGNESIUM ACETATE TETRAHYDRATE, 20% (W/V) REMARK 280 POLYETHYLENE GLYCOL 8,000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 81.04000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 20.57000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 81.04000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 20.57000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 13 REMARK 465 ASN A 14 REMARK 465 ALA A 15 REMARK 465 ASN A 274 REMARK 465 ALA A 275 REMARK 465 LEU A 276 REMARK 465 SER A 277 REMARK 465 LYS A 278 REMARK 465 SER B 13 REMARK 465 ASN B 14 REMARK 465 ALA B 15 REMARK 465 ASN B 274 REMARK 465 ALA B 275 REMARK 465 LEU B 276 REMARK 465 SER B 277 REMARK 465 LYS B 278 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 16 CG CD OE1 OE2 REMARK 470 GLU A 67 CG CD OE1 OE2 REMARK 470 LYS A 141 CG CD CE NZ REMARK 470 GLU A 170 CG CD OE1 OE2 REMARK 470 LYS A 180 NZ REMARK 470 GLU A 191 CG CD OE1 OE2 REMARK 470 LYS A 192 CG CD CE NZ REMARK 470 GLU A 195 CG CD OE1 OE2 REMARK 470 LYS A 205 CD CE NZ REMARK 470 LYS A 223 CG CD CE NZ REMARK 470 LYS A 227 CG CD CE NZ REMARK 470 ILE A 230 CG1 CG2 CD1 REMARK 470 LYS A 236 CG CD CE NZ REMARK 470 LEU A 237 CG CD1 CD2 REMARK 470 SER A 238 OG REMARK 470 SER A 239 OG REMARK 470 LYS A 240 CG CD CE NZ REMARK 470 VAL A 241 CG1 CG2 REMARK 470 LEU A 242 CG CD1 CD2 REMARK 470 GLN A 243 CG CD OE1 NE2 REMARK 470 ASP A 244 CG OD1 OD2 REMARK 470 LYS A 245 CG CD CE NZ REMARK 470 SER A 250 OG REMARK 470 ASP A 253 CG OD1 OD2 REMARK 470 ILE A 263 CG1 CG2 CD1 REMARK 470 ASP A 264 CG OD1 OD2 REMARK 470 ARG A 265 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 266 CG1 CG2 CD1 REMARK 470 VAL A 267 CG1 CG2 REMARK 470 LYS A 268 CG CD CE NZ REMARK 470 ASN A 270 CG OD1 ND2 REMARK 470 GLU A 271 CG CD OE1 OE2 REMARK 470 LYS A 272 CG CD CE NZ REMARK 470 LEU A 273 CG CD1 CD2 REMARK 470 LYS B 44 CD CE NZ REMARK 470 GLU B 63 CG CD OE1 OE2 REMARK 470 LYS B 141 CG CD CE NZ REMARK 470 GLU B 173 CG CD OE1 OE2 REMARK 470 GLN B 177 CG CD OE1 NE2 REMARK 470 LYS B 180 CG CD CE NZ REMARK 470 GLU B 191 CG CD OE1 OE2 REMARK 470 ILE B 193 CG1 CG2 CD1 REMARK 470 GLU B 195 CG CD OE1 OE2 REMARK 470 LYS B 201 CG CD CE NZ REMARK 470 LYS B 205 CG CD CE NZ REMARK 470 GLU B 209 CG CD OE1 OE2 REMARK 470 GLU B 214 CG CD OE1 OE2 REMARK 470 LEU B 217 CG CD1 CD2 REMARK 470 GLU B 220 CG CD OE1 OE2 REMARK 470 LYS B 223 CG CD CE NZ REMARK 470 ILE B 224 CG1 CG2 CD1 REMARK 470 VAL B 226 CG1 CG2 REMARK 470 LYS B 227 CG CD CE NZ REMARK 470 ILE B 230 CG1 CG2 CD1 REMARK 470 LEU B 237 CG CD1 CD2 REMARK 470 SER B 238 OG REMARK 470 SER B 239 OG REMARK 470 LYS B 240 CG CD CE NZ REMARK 470 VAL B 241 CG1 CG2 REMARK 470 LEU B 242 CG CD1 CD2 REMARK 470 GLN B 243 CG CD OE1 NE2 REMARK 470 LYS B 245 CG CD CE NZ REMARK 470 LEU B 246 CG CD1 CD2 REMARK 470 LEU B 249 CG CD1 CD2 REMARK 470 SER B 250 OG REMARK 470 VAL B 254 CG1 CG2 REMARK 470 THR B 258 OG1 CG2 REMARK 470 ASP B 261 CG OD1 OD2 REMARK 470 ASP B 264 CG OD1 OD2 REMARK 470 ARG B 265 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 267 CG1 CG2 REMARK 470 LYS B 268 CG CD CE NZ REMARK 470 GLU B 269 CG CD OE1 OE2 REMARK 470 GLU B 271 CG CD OE1 OE2 REMARK 470 LYS B 272 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 403 O HOH B 439 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 59 47.74 -92.64 REMARK 500 ASP A 125 -140.78 63.95 REMARK 500 PRO A 145 80.04 -67.99 REMARK 500 LYS A 272 58.64 -92.59 REMARK 500 ASP B 125 -143.26 64.07 REMARK 500 PRO B 145 89.44 -67.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5UFK RELATED DB: PDB DBREF 5UF5 A 16 278 UNP G8UUS6 G8UUS6_LEGPN 16 278 DBREF 5UF5 B 16 278 UNP G8UUS6 G8UUS6_LEGPN 16 278 SEQADV 5UF5 SER A 13 UNP G8UUS6 EXPRESSION TAG SEQADV 5UF5 ASN A 14 UNP G8UUS6 EXPRESSION TAG SEQADV 5UF5 ALA A 15 UNP G8UUS6 EXPRESSION TAG SEQADV 5UF5 SER B 13 UNP G8UUS6 EXPRESSION TAG SEQADV 5UF5 ASN B 14 UNP G8UUS6 EXPRESSION TAG SEQADV 5UF5 ALA B 15 UNP G8UUS6 EXPRESSION TAG SEQRES 1 A 266 SER ASN ALA GLU GLN TYR HIS SER GLN VAL VAL GLY LYS SEQRES 2 A 266 ILE GLY TYR ILE ALA ARG CYS MET GLN THR ILE ASP PRO SEQRES 3 A 266 GLU ASN ASN LEU LYS LYS ILE ARG GLU ASP TYR GLN ASP SEQRES 4 A 266 VAL LEU ILE TRP ALA GLU LYS ASN TYR ARG PHE GLU GLU SEQRES 5 A 266 ILE LEU GLU ALA SER LYS SER GLY LYS CYS PRO ASN ASP SEQRES 6 A 266 LEU ASP ALA LEU SER ARG ARG SER LEU ILE LEU GLN GLU SEQRES 7 A 266 LEU LEU ARG LEU VAL SER SER ILE SER PRO PHE LYS MET SEQRES 8 A 266 LYS LEU ASP LEU ILE GLU SER GLN TYR GLU LYS MET LYS SEQRES 9 A 266 GLN HIS VAL ASN LEU TRP LYS SER ASP TYR HIS VAL LYS SEQRES 10 A 266 LEU ASN GLN LEU ASN GLN LEU THR ASP TYR LEU LYS ASN SEQRES 11 A 266 ALA ALA PRO THR PRO LYS ASN ASN PHE LEU ARG ALA MET SEQRES 12 A 266 THR SER VAL LEU GLN MET GLN ILE ALA GLN TYR GLY ILE SEQRES 13 A 266 THR GLU ASP ASN GLU GLY ILE ASN GLN LEU PHE LYS LEU SEQRES 14 A 266 GLY LEU HIS LEU LEU ALA MET ALA ASN GLU LYS ILE ASP SEQRES 15 A 266 GLU GLN TYR HIS LEU PHE LYS GLY TYR VAL LYS ASP GLN SEQRES 16 A 266 PRO GLU GLU SER PRO PHE GLU GLY ILE LEU PRO ALA GLU SEQRES 17 A 266 ASP GLN LYS ILE LEU VAL LYS THR MET ILE ASP TYR ALA SEQRES 18 A 266 MET PRO LYS LEU SER SER LYS VAL LEU GLN ASP LYS LEU SEQRES 19 A 266 SER ALA LEU SER SER SER ASP VAL LEU THR LYS THR LEU SEQRES 20 A 266 LEU ASP SER ILE ASP ARG ILE VAL LYS GLU ASN GLU LYS SEQRES 21 A 266 LEU ASN ALA LEU SER LYS SEQRES 1 B 266 SER ASN ALA GLU GLN TYR HIS SER GLN VAL VAL GLY LYS SEQRES 2 B 266 ILE GLY TYR ILE ALA ARG CYS MET GLN THR ILE ASP PRO SEQRES 3 B 266 GLU ASN ASN LEU LYS LYS ILE ARG GLU ASP TYR GLN ASP SEQRES 4 B 266 VAL LEU ILE TRP ALA GLU LYS ASN TYR ARG PHE GLU GLU SEQRES 5 B 266 ILE LEU GLU ALA SER LYS SER GLY LYS CYS PRO ASN ASP SEQRES 6 B 266 LEU ASP ALA LEU SER ARG ARG SER LEU ILE LEU GLN GLU SEQRES 7 B 266 LEU LEU ARG LEU VAL SER SER ILE SER PRO PHE LYS MET SEQRES 8 B 266 LYS LEU ASP LEU ILE GLU SER GLN TYR GLU LYS MET LYS SEQRES 9 B 266 GLN HIS VAL ASN LEU TRP LYS SER ASP TYR HIS VAL LYS SEQRES 10 B 266 LEU ASN GLN LEU ASN GLN LEU THR ASP TYR LEU LYS ASN SEQRES 11 B 266 ALA ALA PRO THR PRO LYS ASN ASN PHE LEU ARG ALA MET SEQRES 12 B 266 THR SER VAL LEU GLN MET GLN ILE ALA GLN TYR GLY ILE SEQRES 13 B 266 THR GLU ASP ASN GLU GLY ILE ASN GLN LEU PHE LYS LEU SEQRES 14 B 266 GLY LEU HIS LEU LEU ALA MET ALA ASN GLU LYS ILE ASP SEQRES 15 B 266 GLU GLN TYR HIS LEU PHE LYS GLY TYR VAL LYS ASP GLN SEQRES 16 B 266 PRO GLU GLU SER PRO PHE GLU GLY ILE LEU PRO ALA GLU SEQRES 17 B 266 ASP GLN LYS ILE LEU VAL LYS THR MET ILE ASP TYR ALA SEQRES 18 B 266 MET PRO LYS LEU SER SER LYS VAL LEU GLN ASP LYS LEU SEQRES 19 B 266 SER ALA LEU SER SER SER ASP VAL LEU THR LYS THR LEU SEQRES 20 B 266 LEU ASP SER ILE ASP ARG ILE VAL LYS GLU ASN GLU LYS SEQRES 21 B 266 LEU ASN ALA LEU SER LYS HET GOL B 301 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *87(H2 O) HELIX 1 AA1 GLN A 17 ASP A 37 1 21 HELIX 2 AA2 LEU A 42 TYR A 49 1 8 HELIX 3 AA3 TYR A 49 GLU A 57 1 9 HELIX 4 AA4 ARG A 61 SER A 71 1 11 HELIX 5 AA5 ASP A 77 ILE A 98 1 22 HELIX 6 AA6 LYS A 104 LYS A 123 1 20 HELIX 7 AA7 ASP A 125 LYS A 141 1 17 HELIX 8 AA8 THR A 146 GLY A 167 1 22 HELIX 9 AA9 ASN A 172 MET A 188 1 17 HELIX 10 AB1 LYS A 192 ASP A 206 1 15 HELIX 11 AB2 PRO A 218 MET A 234 1 17 HELIX 12 AB3 SER A 239 SER A 250 1 12 HELIX 13 AB4 THR A 256 GLU A 271 1 16 HELIX 14 AB5 TYR B 18 ASP B 37 1 20 HELIX 15 AB6 LEU B 42 TYR B 49 1 8 HELIX 16 AB7 TYR B 49 LYS B 58 1 10 HELIX 17 AB8 ARG B 61 SER B 71 1 11 HELIX 18 AB9 ASP B 77 ILE B 98 1 22 HELIX 19 AC1 LYS B 104 LYS B 123 1 20 HELIX 20 AC2 SER B 124 LEU B 140 1 17 HELIX 21 AC3 THR B 146 GLY B 167 1 22 HELIX 22 AC4 ASN B 172 MET B 188 1 17 HELIX 23 AC5 LYS B 192 ASP B 206 1 15 HELIX 24 AC6 PRO B 218 MET B 234 1 17 HELIX 25 AC7 PRO B 235 LEU B 237 5 3 HELIX 26 AC8 SER B 239 LEU B 249 1 11 HELIX 27 AC9 SER B 250 SER B 252 5 3 HELIX 28 AD1 THR B 256 LYS B 272 1 17 CISPEP 1 SER A 99 PRO A 100 0 8.49 CISPEP 2 SER B 99 PRO B 100 0 9.89 SITE 1 AC1 2 GLY B 24 LYS B 25 CRYST1 162.080 41.140 94.150 90.00 108.39 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006170 0.000000 0.002052 0.00000 SCALE2 0.000000 0.024307 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011193 0.00000