HEADER IMMUNE SYSTEM 04-JAN-17 5UFC TITLE CRYSTAL STRUCTURE OF VARIABLE LYMPHOCYTE RECEPTOR (VLR) TN4-22 WITH H- TITLE 2 TRISACCHARIDE BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: TN4-22; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PETROMYZON MARINUS; SOURCE 3 ORGANISM_COMMON: SEA LAMPREY; SOURCE 4 ORGANISM_TAXID: 7757; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS VARIABLE LYMPHOCYTE RECEPTORS, VLR, LEUCINE-RICH REPEAT, LRR, KEYWDS 2 ADAPTIVE IMMUNITY, IMMUNE SYSTEM, SEA LAMPREY, JAWLESS FISH, KEYWDS 3 RECEPTOR, GLYCAN BINDING, GLYCAN RECEPTOR EXPDTA X-RAY DIFFRACTION AUTHOR B.C.COLLINS,R.J.GUNN,T.R.MCKITRICK,R.D.CUMMINGS,M.D.COOPER, AUTHOR 2 B.R.HERRIN,I.A.WILSON REVDAT 5 04-OCT-23 5UFC 1 HETSYN REVDAT 4 29-JUL-20 5UFC 1 COMPND REMARK HET HETNAM REVDAT 4 2 1 HETSYN FORMUL LINK SITE REVDAT 4 3 1 ATOM REVDAT 3 11-DEC-19 5UFC 1 REMARK REVDAT 2 22-NOV-17 5UFC 1 JRNL REVDAT 1 18-OCT-17 5UFC 0 JRNL AUTH B.C.COLLINS,R.J.GUNN,T.R.MCKITRICK,R.D.CUMMINGS,M.D.COOPER, JRNL AUTH 2 B.R.HERRIN,I.A.WILSON JRNL TITL STRUCTURAL INSIGHTS INTO VLR FINE SPECIFICITY FOR BLOOD JRNL TITL 2 GROUP CARBOHYDRATES. JRNL REF STRUCTURE V. 25 1667 2017 JRNL REFN ISSN 1878-4186 JRNL PMID 28988747 JRNL DOI 10.1016/J.STR.2017.09.003 REMARK 2 REMARK 2 RESOLUTION. 1.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 73413 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 3698 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.4749 - 5.5917 1.00 2936 152 0.1509 0.1538 REMARK 3 2 5.5917 - 4.4392 1.00 2839 126 0.1468 0.1796 REMARK 3 3 4.4392 - 3.8783 1.00 2759 154 0.1530 0.1831 REMARK 3 4 3.8783 - 3.5238 1.00 2768 143 0.1743 0.1996 REMARK 3 5 3.5238 - 3.2713 1.00 2735 152 0.2129 0.2314 REMARK 3 6 3.2713 - 3.0785 1.00 2738 139 0.2273 0.2505 REMARK 3 7 3.0785 - 2.9243 1.00 2748 138 0.2175 0.2708 REMARK 3 8 2.9243 - 2.7970 1.00 2730 143 0.2356 0.2429 REMARK 3 9 2.7970 - 2.6894 1.00 2699 159 0.2254 0.2855 REMARK 3 10 2.6894 - 2.5966 1.00 2701 139 0.2307 0.2826 REMARK 3 11 2.5966 - 2.5154 1.00 2706 161 0.2208 0.2757 REMARK 3 12 2.5154 - 2.4435 1.00 2717 140 0.2092 0.2690 REMARK 3 13 2.4435 - 2.3791 1.00 2734 141 0.2197 0.2747 REMARK 3 14 2.3791 - 2.3211 1.00 2722 124 0.2102 0.2375 REMARK 3 15 2.3211 - 2.2683 1.00 2683 141 0.2030 0.2786 REMARK 3 16 2.2683 - 2.2201 1.00 2727 152 0.2153 0.2526 REMARK 3 17 2.2201 - 2.1757 1.00 2699 139 0.2267 0.2725 REMARK 3 18 2.1757 - 2.1346 1.00 2684 164 0.2261 0.2905 REMARK 3 19 2.1346 - 2.0965 1.00 2653 149 0.2301 0.2551 REMARK 3 20 2.0965 - 2.0609 1.00 2693 153 0.2341 0.2914 REMARK 3 21 2.0609 - 2.0277 1.00 2678 157 0.2283 0.2709 REMARK 3 22 2.0277 - 1.9965 1.00 2733 141 0.2365 0.2980 REMARK 3 23 1.9965 - 1.9671 1.00 2653 143 0.2414 0.2930 REMARK 3 24 1.9671 - 1.9394 1.00 2674 128 0.2463 0.2671 REMARK 3 25 1.9394 - 1.9132 1.00 2741 146 0.2635 0.2683 REMARK 3 26 1.9132 - 1.8884 0.58 1565 74 0.3513 0.3775 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5798 REMARK 3 ANGLE : 1.100 7900 REMARK 3 CHIRALITY : 0.044 915 REMARK 3 PLANARITY : 0.005 1005 REMARK 3 DIHEDRAL : 13.783 2291 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UFC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1000225771. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03320 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74657 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.888 REMARK 200 RESOLUTION RANGE LOW (A) : 49.458 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 9.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 5UFB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11 MG/ML TN4-22, 1 MM H-TRISACCHARIDE, REMARK 280 85 MM SODIUM ACETATE, PH 4.6, 170 MM AMMONIUM ACETATE, 15% REMARK 280 GLYCEROL, 25.5% PEG4000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.29167 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 108.58333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 108.58333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 54.29167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 1 REMARK 465 HIS A 2 REMARK 465 GLY A 3 REMARK 465 GLY A 4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 HIS B 1 REMARK 465 HIS B 2 REMARK 465 GLY B 3 REMARK 465 GLY B 4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 HIS C -1 REMARK 465 HIS C 0 REMARK 465 HIS C 1 REMARK 465 HIS C 2 REMARK 465 GLY C 3 REMARK 465 GLY C 4 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 121 CG CD OE1 OE2 REMARK 470 GLU B 121 CG CD OE1 OE2 REMARK 470 GLU B 142 CG CD OE1 OE2 REMARK 470 ARG B 145 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 48 CD OE1 OE2 REMARK 470 ARG C 54 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 78 CD CE NZ REMARK 470 GLU C 121 CG CD OE1 OE2 REMARK 470 ARG C 126 NE CZ NH1 NH2 REMARK 470 ARG C 145 CG CD NE CZ NH1 NH2 REMARK 470 HIS C 168 CG ND1 CD2 CE1 NE2 REMARK 470 ARG C 192 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 214 CG CD CE NZ REMARK 470 GLU C 236 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER C 80 O HOH C 401 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 22 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 42 -157.77 -128.94 REMARK 500 PRO A 49 -51.25 -27.48 REMARK 500 ASN A 66 -156.38 -131.10 REMARK 500 ASN A 90 -153.15 -121.12 REMARK 500 ASN A 114 -160.33 -127.68 REMARK 500 MET A 135 40.33 -145.26 REMARK 500 ASN A 138 -154.18 -116.25 REMARK 500 ASN A 161 -153.56 -111.90 REMARK 500 LEU A 174 58.78 -90.90 REMARK 500 ASP A 212 55.59 -102.10 REMARK 500 ASP A 218 90.87 -164.56 REMARK 500 ASN B 41 61.74 61.95 REMARK 500 LEU B 55 53.11 -91.27 REMARK 500 ASN B 66 -160.60 -129.15 REMARK 500 ASN B 90 -156.25 -120.70 REMARK 500 ASN B 138 -156.72 -121.01 REMARK 500 ASN B 161 -152.26 -105.96 REMARK 500 ASP B 212 50.74 -110.70 REMARK 500 ARG C 12 -89.46 -99.98 REMARK 500 ASN C 41 60.14 62.64 REMARK 500 ASN C 66 -157.54 -130.08 REMARK 500 ASN C 90 -155.02 -117.96 REMARK 500 LEU C 103 59.48 -92.71 REMARK 500 ASN C 114 -159.15 -132.11 REMARK 500 LEU C 127 57.22 -91.74 REMARK 500 ASN C 138 -153.16 -119.29 REMARK 500 ASN C 161 -153.79 -109.17 REMARK 500 ASP C 212 58.20 -105.91 REMARK 500 ASP C 218 88.91 -161.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5UEI RELATED DB: PDB REMARK 900 RELATED ID: 5UF1 RELATED DB: PDB REMARK 900 RELATED ID: 5UF4 RELATED DB: PDB REMARK 900 RELATED ID: 5UFB RELATED DB: PDB REMARK 900 RELATED ID: 5UFD RELATED DB: PDB REMARK 900 RELATED ID: 5UFF RELATED DB: PDB DBREF 5UFC A -3 244 PDB 5UFC 5UFC -3 244 DBREF 5UFC B -3 244 PDB 5UFC 5UFC -3 244 DBREF 5UFC C -3 244 PDB 5UFC 5UFC -3 244 SEQRES 1 A 248 HIS HIS HIS HIS HIS HIS GLY GLY CYS PRO SER GLN CYS SEQRES 2 A 248 SER CYS ARG GLY THR TYR VAL ASP CYS ASP SER ARG ARG SEQRES 3 A 248 LEU ALA SER VAL PRO ALA GLY ILE PRO THR ASN VAL GLN SEQRES 4 A 248 ILE LEU ASN LEU TYR ASN ASN GLN ILE THR ASN LEU GLU SEQRES 5 A 248 PRO GLY VAL PHE ASP ARG LEU VAL ASN LEU GLN LYS LEU SEQRES 6 A 248 TYR LEU SER GLY ASN GLN LEU GLN ALA LEU PRO VAL GLY SEQRES 7 A 248 VAL PHE ASP LYS LEU SER GLN LEU THR PHE LEU SER LEU SEQRES 8 A 248 ASP GLU ASN LYS LEU THR ALA LEU PRO ASN GLY VAL PHE SEQRES 9 A 248 ASP LYS LEU THR GLU LEU THR TYR LEU ASN LEU ASN THR SEQRES 10 A 248 ASN GLN LEU THR ALA LEU PRO GLU GLY VAL PHE ASP ARG SEQRES 11 A 248 LEU VAL HIS LEU LYS GLU LEU LEU MET CYS CYS ASN LYS SEQRES 12 A 248 LEU THR GLU LEU PRO ARG GLY ILE GLU ARG LEU THR HIS SEQRES 13 A 248 LEU THR HIS LEU ALA LEU ASP GLN ASN GLN LEU LYS SER SEQRES 14 A 248 ILE PRO HIS GLY ALA PHE ASP ARG LEU SER SER LEU THR SEQRES 15 A 248 HIS ALA TYR LEU PHE GLY ASN PRO TRP ASP CYS GLU CYS SEQRES 16 A 248 ARG ASP ILE MET TYR LEU ARG ASN TRP VAL ALA ASP HIS SEQRES 17 A 248 THR SER ILE VAL MET ARG TRP ASP GLY LYS ALA VAL ASN SEQRES 18 A 248 ASP PRO ASP SER ALA LYS CYS ALA GLY THR ASN THR PRO SEQRES 19 A 248 VAL ARG ALA VAL THR GLU ALA SER THR SER PRO SER LYS SEQRES 20 A 248 CYS SEQRES 1 B 248 HIS HIS HIS HIS HIS HIS GLY GLY CYS PRO SER GLN CYS SEQRES 2 B 248 SER CYS ARG GLY THR TYR VAL ASP CYS ASP SER ARG ARG SEQRES 3 B 248 LEU ALA SER VAL PRO ALA GLY ILE PRO THR ASN VAL GLN SEQRES 4 B 248 ILE LEU ASN LEU TYR ASN ASN GLN ILE THR ASN LEU GLU SEQRES 5 B 248 PRO GLY VAL PHE ASP ARG LEU VAL ASN LEU GLN LYS LEU SEQRES 6 B 248 TYR LEU SER GLY ASN GLN LEU GLN ALA LEU PRO VAL GLY SEQRES 7 B 248 VAL PHE ASP LYS LEU SER GLN LEU THR PHE LEU SER LEU SEQRES 8 B 248 ASP GLU ASN LYS LEU THR ALA LEU PRO ASN GLY VAL PHE SEQRES 9 B 248 ASP LYS LEU THR GLU LEU THR TYR LEU ASN LEU ASN THR SEQRES 10 B 248 ASN GLN LEU THR ALA LEU PRO GLU GLY VAL PHE ASP ARG SEQRES 11 B 248 LEU VAL HIS LEU LYS GLU LEU LEU MET CYS CYS ASN LYS SEQRES 12 B 248 LEU THR GLU LEU PRO ARG GLY ILE GLU ARG LEU THR HIS SEQRES 13 B 248 LEU THR HIS LEU ALA LEU ASP GLN ASN GLN LEU LYS SER SEQRES 14 B 248 ILE PRO HIS GLY ALA PHE ASP ARG LEU SER SER LEU THR SEQRES 15 B 248 HIS ALA TYR LEU PHE GLY ASN PRO TRP ASP CYS GLU CYS SEQRES 16 B 248 ARG ASP ILE MET TYR LEU ARG ASN TRP VAL ALA ASP HIS SEQRES 17 B 248 THR SER ILE VAL MET ARG TRP ASP GLY LYS ALA VAL ASN SEQRES 18 B 248 ASP PRO ASP SER ALA LYS CYS ALA GLY THR ASN THR PRO SEQRES 19 B 248 VAL ARG ALA VAL THR GLU ALA SER THR SER PRO SER LYS SEQRES 20 B 248 CYS SEQRES 1 C 248 HIS HIS HIS HIS HIS HIS GLY GLY CYS PRO SER GLN CYS SEQRES 2 C 248 SER CYS ARG GLY THR TYR VAL ASP CYS ASP SER ARG ARG SEQRES 3 C 248 LEU ALA SER VAL PRO ALA GLY ILE PRO THR ASN VAL GLN SEQRES 4 C 248 ILE LEU ASN LEU TYR ASN ASN GLN ILE THR ASN LEU GLU SEQRES 5 C 248 PRO GLY VAL PHE ASP ARG LEU VAL ASN LEU GLN LYS LEU SEQRES 6 C 248 TYR LEU SER GLY ASN GLN LEU GLN ALA LEU PRO VAL GLY SEQRES 7 C 248 VAL PHE ASP LYS LEU SER GLN LEU THR PHE LEU SER LEU SEQRES 8 C 248 ASP GLU ASN LYS LEU THR ALA LEU PRO ASN GLY VAL PHE SEQRES 9 C 248 ASP LYS LEU THR GLU LEU THR TYR LEU ASN LEU ASN THR SEQRES 10 C 248 ASN GLN LEU THR ALA LEU PRO GLU GLY VAL PHE ASP ARG SEQRES 11 C 248 LEU VAL HIS LEU LYS GLU LEU LEU MET CYS CYS ASN LYS SEQRES 12 C 248 LEU THR GLU LEU PRO ARG GLY ILE GLU ARG LEU THR HIS SEQRES 13 C 248 LEU THR HIS LEU ALA LEU ASP GLN ASN GLN LEU LYS SER SEQRES 14 C 248 ILE PRO HIS GLY ALA PHE ASP ARG LEU SER SER LEU THR SEQRES 15 C 248 HIS ALA TYR LEU PHE GLY ASN PRO TRP ASP CYS GLU CYS SEQRES 16 C 248 ARG ASP ILE MET TYR LEU ARG ASN TRP VAL ALA ASP HIS SEQRES 17 C 248 THR SER ILE VAL MET ARG TRP ASP GLY LYS ALA VAL ASN SEQRES 18 C 248 ASP PRO ASP SER ALA LYS CYS ALA GLY THR ASN THR PRO SEQRES 19 C 248 VAL ARG ALA VAL THR GLU ALA SER THR SER PRO SER LYS SEQRES 20 C 248 CYS HET NAG D 1 15 HET GAL D 2 11 HET FUC D 3 10 HET NAG E 1 15 HET GAL E 2 11 HET FUC E 3 10 HET NAG F 1 15 HET GAL F 2 11 HET FUC F 3 10 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 4 NAG 3(C8 H15 N O6) FORMUL 4 GAL 3(C6 H12 O6) FORMUL 4 FUC 3(C6 H12 O5) FORMUL 7 HOH *267(H2 O) HELIX 1 AA1 GLY A 146 LEU A 150 5 5 HELIX 2 AA2 CYS A 191 ASP A 193 5 3 HELIX 3 AA3 ILE A 194 HIS A 204 1 11 HELIX 4 AA4 PRO A 219 ALA A 222 5 4 HELIX 5 AA5 PRO A 230 VAL A 234 5 5 HELIX 6 AA6 THR A 235 THR A 239 5 5 HELIX 7 AA7 GLY B 146 LEU B 150 5 5 HELIX 8 AA8 CYS B 191 ASP B 193 5 3 HELIX 9 AA9 ILE B 194 HIS B 204 1 11 HELIX 10 AB1 PRO B 230 VAL B 234 5 5 HELIX 11 AB2 THR B 235 THR B 239 5 5 HELIX 12 AB3 GLY C 146 LEU C 150 5 5 HELIX 13 AB4 CYS C 191 ASP C 193 5 3 HELIX 14 AB5 ILE C 194 HIS C 204 1 11 HELIX 15 AB6 PRO C 230 VAL C 234 5 5 HELIX 16 AB7 THR C 235 THR C 239 5 5 SHEET 1 AA111 SER A 10 CYS A 11 0 SHEET 2 AA111 TYR A 15 ASP A 17 -1 O ASP A 17 N SER A 10 SHEET 3 AA111 ILE A 36 ASN A 38 1 O ILE A 36 N VAL A 16 SHEET 4 AA111 LYS A 60 TYR A 62 1 O TYR A 62 N LEU A 37 SHEET 5 AA111 PHE A 84 SER A 86 1 O PHE A 84 N LEU A 61 SHEET 6 AA111 TYR A 108 ASN A 110 1 O TYR A 108 N LEU A 85 SHEET 7 AA111 GLU A 132 LEU A 134 1 O LEU A 134 N LEU A 109 SHEET 8 AA111 HIS A 155 ALA A 157 1 O HIS A 155 N LEU A 133 SHEET 9 AA111 HIS A 179 TYR A 181 1 O TYR A 181 N LEU A 156 SHEET 10 AA111 VAL A 208 TRP A 211 1 O MET A 209 N ALA A 180 SHEET 11 AA111 ALA A 215 ASN A 217 -1 O VAL A 216 N ARG A 210 SHEET 1 AA211 SER B 10 CYS B 11 0 SHEET 2 AA211 TYR B 15 ASP B 17 -1 O ASP B 17 N SER B 10 SHEET 3 AA211 ILE B 36 ASN B 38 1 O ILE B 36 N VAL B 16 SHEET 4 AA211 LYS B 60 TYR B 62 1 O TYR B 62 N LEU B 37 SHEET 5 AA211 PHE B 84 SER B 86 1 O SER B 86 N LEU B 61 SHEET 6 AA211 TYR B 108 ASN B 110 1 O ASN B 110 N LEU B 85 SHEET 7 AA211 GLU B 132 LEU B 134 1 O LEU B 134 N LEU B 109 SHEET 8 AA211 HIS B 155 ALA B 157 1 O HIS B 155 N LEU B 133 SHEET 9 AA211 HIS B 179 TYR B 181 1 O TYR B 181 N LEU B 156 SHEET 10 AA211 VAL B 208 TRP B 211 1 O MET B 209 N ALA B 180 SHEET 11 AA211 ALA B 215 ASN B 217 -1 O VAL B 216 N ARG B 210 SHEET 1 AA311 SER C 10 CYS C 11 0 SHEET 2 AA311 TYR C 15 ASP C 17 -1 O ASP C 17 N SER C 10 SHEET 3 AA311 ILE C 36 ASN C 38 1 O ILE C 36 N VAL C 16 SHEET 4 AA311 LYS C 60 TYR C 62 1 O TYR C 62 N LEU C 37 SHEET 5 AA311 PHE C 84 SER C 86 1 O PHE C 84 N LEU C 61 SHEET 6 AA311 TYR C 108 ASN C 110 1 O TYR C 108 N LEU C 85 SHEET 7 AA311 GLU C 132 LEU C 134 1 O LEU C 134 N LEU C 109 SHEET 8 AA311 HIS C 155 ALA C 157 1 O HIS C 155 N LEU C 133 SHEET 9 AA311 HIS C 179 TYR C 181 1 O TYR C 181 N LEU C 156 SHEET 10 AA311 VAL C 208 TRP C 211 1 O MET C 209 N ALA C 180 SHEET 11 AA311 ALA C 215 ASN C 217 -1 O VAL C 216 N ARG C 210 SSBOND 1 CYS A 5 CYS A 11 1555 1555 2.06 SSBOND 2 CYS A 9 CYS A 18 1555 1555 2.07 SSBOND 3 CYS A 136 CYS A 137 1555 1555 2.09 SSBOND 4 CYS A 189 CYS A 224 1555 1555 2.06 SSBOND 5 CYS A 191 CYS A 244 1555 1555 2.05 SSBOND 6 CYS B 5 CYS B 11 1555 1555 2.05 SSBOND 7 CYS B 9 CYS B 18 1555 1555 2.07 SSBOND 8 CYS B 136 CYS B 137 1555 1555 2.10 SSBOND 9 CYS B 189 CYS B 224 1555 1555 2.05 SSBOND 10 CYS B 191 CYS B 244 1555 1555 2.05 SSBOND 11 CYS C 5 CYS C 11 1555 1555 2.05 SSBOND 12 CYS C 9 CYS C 18 1555 1555 2.06 SSBOND 13 CYS C 136 CYS C 137 1555 1555 2.08 SSBOND 14 CYS C 189 CYS C 224 1555 1555 2.05 SSBOND 15 CYS C 191 CYS C 244 1555 1555 2.04 LINK O4 NAG D 1 C1 GAL D 2 1555 1555 1.42 LINK O2 GAL D 2 C1 FUC D 3 1555 1555 1.41 LINK O4 NAG E 1 C1 GAL E 2 1555 1555 1.41 LINK O2 GAL E 2 C1 FUC E 3 1555 1555 1.42 LINK O4 NAG F 1 C1 GAL F 2 1555 1555 1.41 LINK O2 GAL F 2 C1 FUC F 3 1555 1555 1.42 CRYST1 98.916 98.916 162.875 90.00 90.00 120.00 P 31 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010110 0.005837 0.000000 0.00000 SCALE2 0.000000 0.011674 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006140 0.00000