HEADER TRANSFERASE 06-JAN-17 5UG1 TITLE STRUCTURE OF STREPTOCOCCUS PNEUMONIAE PEPTIDOGLYCAN O- TITLE 2 ACETYLTRANSFERASE A (OATA) C-TERMINAL CATALYTIC DOMAIN WITH TITLE 3 METHYLSULFONYL ADDUCT COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.3.1.-; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 1313; SOURCE 4 GENE: OATA_2, OATA, ERS020148_01611, ERS021300_00524, SOURCE 5 ERS022045_04974; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS TRANSFERASE, ATYPICAL ALPHA/BETA HYDROLASE FOLD, CATALYTIC TRIAD, KEYWDS 2 COVALENT COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.SYCHANTHA,C.JONES,D.J.LITTLE,P.J.MOYNIHAN,H.ROBINSON,N.F.GALLEY, AUTHOR 2 D.I.ROPER,C.G.DOWSON,P.L.HOWELL,A.J.CLARKE REVDAT 2 06-DEC-17 5UG1 1 JRNL REVDAT 1 25-OCT-17 5UG1 0 JRNL AUTH D.SYCHANTHA,C.S.JONES,D.J.LITTLE,P.J.MOYNIHAN,H.ROBINSON, JRNL AUTH 2 N.F.GALLEY,D.I.ROPER,C.G.DOWSON,P.L.HOWELL,A.J.CLARKE JRNL TITL IN VITRO CHARACTERIZATION OF THE ANTIVIRULENCE TARGET OF JRNL TITL 2 GRAM-POSITIVE PATHOGENS, PEPTIDOGLYCAN O-ACETYLTRANSFERASE A JRNL TITL 3 (OATA). JRNL REF PLOS PATHOG. V. 13 06667 2017 JRNL REFN ESSN 1553-7374 JRNL PMID 29077761 JRNL DOI 10.1371/JOURNAL.PPAT.1006667 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 10180 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1018 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.8903 - 4.0130 0.99 1424 159 0.1502 0.1745 REMARK 3 2 4.0130 - 3.1871 0.99 1341 149 0.1420 0.2206 REMARK 3 3 3.1871 - 2.7847 0.99 1314 145 0.1911 0.2368 REMARK 3 4 2.7847 - 2.5304 0.98 1298 145 0.2155 0.3352 REMARK 3 5 2.5304 - 2.3491 0.98 1271 141 0.2029 0.2408 REMARK 3 6 2.3491 - 2.2107 0.97 1267 141 0.1946 0.2914 REMARK 3 7 2.2107 - 2.1000 0.95 1247 138 0.2120 0.3155 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.120 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1390 REMARK 3 ANGLE : 0.768 1894 REMARK 3 CHIRALITY : 0.047 223 REMARK 3 PLANARITY : 0.005 244 REMARK 3 DIHEDRAL : 12.343 840 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 427 THROUGH 463 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.9624 24.4465 -23.8922 REMARK 3 T TENSOR REMARK 3 T11: 0.1734 T22: 0.2015 REMARK 3 T33: 0.2395 T12: -0.0117 REMARK 3 T13: 0.0614 T23: 0.0205 REMARK 3 L TENSOR REMARK 3 L11: 6.0391 L22: 1.7097 REMARK 3 L33: 8.0571 L12: -0.6381 REMARK 3 L13: 3.7967 L23: 0.8615 REMARK 3 S TENSOR REMARK 3 S11: 0.0628 S12: 0.3738 S13: 0.1833 REMARK 3 S21: -0.0828 S22: -0.0769 S23: -0.1897 REMARK 3 S31: -0.0589 S32: 0.3973 S33: 0.0347 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 464 THROUGH 516 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.6441 31.4209 -20.4813 REMARK 3 T TENSOR REMARK 3 T11: 0.1812 T22: 0.1764 REMARK 3 T33: 0.2402 T12: 0.0166 REMARK 3 T13: -0.0091 T23: -0.0156 REMARK 3 L TENSOR REMARK 3 L11: 1.4431 L22: 2.9961 REMARK 3 L33: 4.3036 L12: -0.6718 REMARK 3 L13: 0.1237 L23: -0.2181 REMARK 3 S TENSOR REMARK 3 S11: 0.0135 S12: -0.0426 S13: 0.0878 REMARK 3 S21: -0.0595 S22: -0.0135 S23: -0.1002 REMARK 3 S31: -0.2027 S32: -0.0727 S33: -0.0060 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 517 THROUGH 552 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.6240 24.3316 -7.4677 REMARK 3 T TENSOR REMARK 3 T11: 0.2167 T22: 0.2574 REMARK 3 T33: 0.2234 T12: 0.0111 REMARK 3 T13: 0.0052 T23: 0.0129 REMARK 3 L TENSOR REMARK 3 L11: 5.6948 L22: 1.2779 REMARK 3 L33: 3.8185 L12: 0.5870 REMARK 3 L13: 4.6189 L23: 0.7491 REMARK 3 S TENSOR REMARK 3 S11: -0.0522 S12: -0.2930 S13: -0.1419 REMARK 3 S21: 0.1610 S22: 0.1771 S23: -0.0553 REMARK 3 S31: -0.0928 S32: -0.2752 S33: -0.1576 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 553 THROUGH 563 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.1023 15.0044 -6.8902 REMARK 3 T TENSOR REMARK 3 T11: 0.3202 T22: 0.2460 REMARK 3 T33: 0.2602 T12: -0.0266 REMARK 3 T13: -0.0195 T23: 0.0440 REMARK 3 L TENSOR REMARK 3 L11: 7.2449 L22: 3.1577 REMARK 3 L33: 2.6639 L12: -4.5029 REMARK 3 L13: -1.6085 L23: 1.9099 REMARK 3 S TENSOR REMARK 3 S11: -0.2321 S12: -0.5812 S13: -0.6910 REMARK 3 S21: 0.4043 S22: 0.4626 S23: 0.4215 REMARK 3 S31: 1.0861 S32: -0.1895 S33: -0.2155 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 564 THROUGH 575 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.8701 21.0741 -6.8838 REMARK 3 T TENSOR REMARK 3 T11: 0.2280 T22: 0.3009 REMARK 3 T33: 0.3019 T12: 0.0283 REMARK 3 T13: -0.0204 T23: -0.0157 REMARK 3 L TENSOR REMARK 3 L11: 4.1094 L22: 3.3878 REMARK 3 L33: 4.7163 L12: 0.4300 REMARK 3 L13: 3.4769 L23: -2.0516 REMARK 3 S TENSOR REMARK 3 S11: -0.2135 S12: -0.2782 S13: 0.3280 REMARK 3 S21: 0.0136 S22: 0.1271 S23: -0.2890 REMARK 3 S31: -0.1424 S32: 0.2303 S33: 0.1271 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 576 THROUGH 605 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.1810 16.0087 -20.2145 REMARK 3 T TENSOR REMARK 3 T11: 0.2717 T22: 0.2077 REMARK 3 T33: 0.2407 T12: -0.0037 REMARK 3 T13: 0.0453 T23: -0.0247 REMARK 3 L TENSOR REMARK 3 L11: 6.4258 L22: 2.3993 REMARK 3 L33: 6.4484 L12: -2.3991 REMARK 3 L13: 6.2574 L23: -1.6190 REMARK 3 S TENSOR REMARK 3 S11: 0.6567 S12: 0.3156 S13: -0.4524 REMARK 3 S21: -0.1932 S22: -0.2010 S23: 0.0020 REMARK 3 S31: 0.7638 S32: 0.0702 S33: -0.5225 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UG1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1000225805. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10191 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 25.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 13.40 REMARK 200 R MERGE (I) : 0.14400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.6 REMARK 200 DATA REDUNDANCY IN SHELL : 11.39 REMARK 200 R MERGE FOR SHELL (I) : 0.50200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES:NAOH, 1.2 M SODIUM CITRATE REMARK 280 TRIBASIC, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 35.24050 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 35.24050 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 68.07300 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 35.24050 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 35.24050 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 68.07300 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 35.24050 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 35.24050 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 68.07300 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 35.24050 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 35.24050 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 68.07300 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 35.24050 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 35.24050 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 68.07300 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 35.24050 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 35.24050 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 68.07300 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 35.24050 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 35.24050 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 68.07300 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 35.24050 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 35.24050 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 68.07300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 605 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 914 O HOH A 914 15454 1.92 REMARK 500 O HOH A 831 O HOH A 914 15454 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 487 73.92 -111.39 REMARK 500 ASN A 495 31.61 -91.78 REMARK 500 VAL A 570 -42.95 -139.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 702 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 542 O REMARK 620 2 THR A 545 O 95.5 REMARK 620 3 ILE A 548 O 98.6 87.6 REMARK 620 4 HOH A 897 O 80.4 174.0 88.7 REMARK 620 5 HOH A 858 O 88.7 86.0 170.7 98.2 REMARK 620 6 HOH A 816 O 164.2 98.0 90.2 86.8 84.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 03S A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 702 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5UFY RELATED DB: PDB DBREF1 5UG1 A 427 605 UNP A0A0T8LL95_STREE DBREF2 5UG1 A A0A0T8LL95 427 605 SEQRES 1 A 179 GLY ILE ALA ASP GLY THR MET LEU ILE GLY ASP SER VAL SEQRES 2 A 179 ALA LEU ARG ALA ASN THR ALA LEU GLN THR ALA LEU PRO SEQRES 3 A 179 GLY ALA GLN ILE ASN ALA GLN VAL SER VAL THR THR LYS SEQRES 4 A 179 THR ALA ASN GLU ILE MET LEU ASN ASN SER GLN ASN LYS SEQRES 5 A 179 PHE LEU PRO LYS THR VAL VAL ILE ALA THR GLY VAL ASN SEQRES 6 A 179 ASN PRO GLU ASN TYR LYS ASP ASP TRP ASP SER ILE VAL SEQRES 7 A 179 LYS ASN LEU PRO LYS GLY HIS HIS MET ILE LEU VAL THR SEQRES 8 A 179 PRO TYR GLU GLY ASP LYS THR LYS GLU THR TYR ALA ILE SEQRES 9 A 179 VAL GLU LYS ALA ALA ALA TYR MET ARG GLU LEU ALA GLU SEQRES 10 A 179 LYS THR PRO TYR ILE THR ILE ALA ASP TRP ASN GLN VAL SEQRES 11 A 179 ALA LYS GLU HIS PRO GLU ILE TRP ALA GLY THR ASP GLN SEQRES 12 A 179 VAL HIS PHE GLY SER GLU SER SER THR ILE GLU ALA GLY SEQRES 13 A 179 ALA LYS LEU TYR ALA ASP THR ILE ALA THR ALA LEU GLN SEQRES 14 A 179 THR ALA GLN ASP LYS PRO VAL LYS SER LYS HET 03S A 701 4 HET NA A 702 1 HETNAM 03S METHANESULFONIC ACID HETNAM NA SODIUM ION FORMUL 2 03S C H4 O3 S FORMUL 3 NA NA 1+ FORMUL 4 HOH *156(H2 O) HELIX 1 AA1 ASP A 437 ALA A 443 1 7 HELIX 2 AA2 ALA A 443 LEU A 451 1 9 HELIX 3 AA3 THR A 463 ASN A 477 1 15 HELIX 4 AA4 ASN A 492 GLU A 494 5 3 HELIX 5 AA5 ASN A 495 LEU A 507 1 13 HELIX 6 AA6 THR A 527 THR A 545 1 19 HELIX 7 AA7 ASP A 552 GLU A 559 1 8 HELIX 8 AA8 HIS A 560 TRP A 564 5 5 HELIX 9 AA9 GLU A 575 GLN A 598 1 24 SHEET 1 AA1 5 GLN A 455 ALA A 458 0 SHEET 2 AA1 5 THR A 432 GLY A 436 1 N LEU A 434 O ASN A 457 SHEET 3 AA1 5 THR A 483 ALA A 487 1 O VAL A 485 N ILE A 435 SHEET 4 AA1 5 HIS A 512 VAL A 516 1 O ILE A 514 N VAL A 484 SHEET 5 AA1 5 ILE A 548 ALA A 551 1 O ALA A 551 N LEU A 515 LINK OG SER A 438 S10 03S A 701 1555 1555 1.52 LINK O ALA A 542 NA NA A 702 1555 1555 2.31 LINK O THR A 545 NA NA A 702 1555 1555 2.35 LINK O ILE A 548 NA NA A 702 1555 1555 2.35 LINK NA NA A 702 O HOH A 897 1555 1555 2.37 LINK NA NA A 702 O HOH A 858 1555 1555 2.39 LINK NA NA A 702 O HOH A 816 1555 4455 2.51 SITE 1 AC1 6 ASP A 437 SER A 438 VAL A 439 VAL A 460 SITE 2 AC1 6 ASN A 491 HIS A 571 SITE 1 AC2 6 ALA A 542 THR A 545 ILE A 548 HOH A 816 SITE 2 AC2 6 HOH A 858 HOH A 897 CRYST1 70.481 70.481 136.146 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014188 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014188 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007345 0.00000