HEADER TRANSFERASE 15-JAN-17 5UIV TITLE STRUCTURE OF THYMIDYLATE KINASE FROM CANDIDA ALBICANS REVEALS ORIGIN TITLE 2 OF BROAD SUBSTRATE SPECIFICITY AND A NOVEL STRUCTURAL ELEMENT. COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL THYMIDYLATE/URIDYLATE KINASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA ALBICANS SC5314; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 237561; SOURCE 5 STRAIN: SC5314 / ATCC MYA-2876; SOURCE 6 GENE: CAALFM_C111790WA; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS THYMIDYLATE KINASE, CANDIDA ALBICANS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.SINHA,G.S.RULE REVDAT 4 04-OCT-23 5UIV 1 REMARK REVDAT 3 06-SEP-17 5UIV 1 JRNL REVDAT 2 16-AUG-17 5UIV 1 JRNL REVDAT 1 09-AUG-17 5UIV 0 JRNL AUTH K.SINHA,G.S.RULE JRNL TITL THE STRUCTURE OF THYMIDYLATE KINASE FROM CANDIDA ALBICANS JRNL TITL 2 REVEALS A UNIQUE STRUCTURAL ELEMENT. JRNL REF BIOCHEMISTRY V. 56 4360 2017 JRNL REFN ISSN 1520-4995 JRNL PMID 28742342 JRNL DOI 10.1021/ACS.BIOCHEM.7B00498 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 60.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 3 NUMBER OF REFLECTIONS : 11056 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 606 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.51 REMARK 3 REFLECTION IN BIN (WORKING SET) : 480 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 54.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2440 REMARK 3 BIN FREE R VALUE SET COUNT : 35 REMARK 3 BIN FREE R VALUE : 0.2970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1817 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 50 REMARK 3 SOLVENT ATOMS : 77 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.01000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.332 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.234 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.162 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.425 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1906 ; 0.016 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1823 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2591 ; 1.938 ; 1.999 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4210 ; 1.039 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 226 ; 6.207 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 89 ;41.321 ;25.730 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 351 ;15.075 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;18.711 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 295 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2115 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 422 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 904 ; 2.861 ; 3.470 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 903 ; 2.858 ; 3.469 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1129 ; 4.349 ; 5.201 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1130 ; 4.348 ; 5.202 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1002 ; 3.564 ; 3.758 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1003 ; 3.562 ; 3.758 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1462 ; 5.557 ; 5.492 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2167 ; 7.221 ;27.074 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2148 ; 7.196 ;27.042 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5UIV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1000225903. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E DW REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM 7.2.0 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11717 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 60.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.13400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 1.8900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.27800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3TMK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, 1.1 N SODIUM CITRATE, PH REMARK 280 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 285K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.44067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 38.72033 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 38.72033 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 77.44067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -73.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 429 O HOH A 456 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 183 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 92 150.07 78.47 REMARK 500 TYR A 93 -137.32 -168.83 REMARK 500 ASP A 109 112.03 -164.68 REMARK 500 GLN A 120 -2.52 69.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 13 OD1 REMARK 620 2 ADP A 302 O3B 99.4 REMARK 620 3 HOH A 424 O 99.2 92.6 REMARK 620 4 HOH A 432 O 72.1 79.0 166.4 REMARK 620 5 HOH A 454 O 91.0 169.1 89.2 101.2 REMARK 620 6 HOH A 471 O 160.4 100.2 80.1 111.6 69.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 304 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 13 OD1 REMARK 620 2 ASP A 13 OD2 52.3 REMARK 620 3 GLY A 155 O 120.6 96.1 REMARK 620 4 GLU A 162 OE2 113.8 73.8 97.9 REMARK 620 5 HOH A 450 O 131.3 147.0 103.2 77.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TMP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 304 DBREF 5UIV A 2 224 UNP Q59TV7 Q59TV7_CANAL 2 224 SEQADV 5UIV GLY A -2 UNP Q59TV7 EXPRESSION TAG SEQADV 5UIV SER A -1 UNP Q59TV7 EXPRESSION TAG SEQADV 5UIV THR A 0 UNP Q59TV7 EXPRESSION TAG SEQADV 5UIV SER A 1 UNP Q59TV7 EXPRESSION TAG SEQRES 1 A 227 GLY SER THR SER ALA ARG GLY GLN LEU ILE LEU ILE GLU SEQRES 2 A 227 GLY LEU ASP ARG SER GLY LYS SER THR GLN ALA SER ILE SEQRES 3 A 227 LEU SER THR LYS LEU SER PRO SER LYS LEU ILE LYS PHE SEQRES 4 A 227 PRO ASP ARG SER THR PRO ILE GLY LYS LEU ILE ASN GLU SEQRES 5 A 227 TYR LEU THR ASN LYS SER PHE THR LEU SER ASP GLN ALA SEQRES 6 A 227 ALA HIS LEU LEU PHE SER ALA ASN ARG TRP GLU LEU SER SEQRES 7 A 227 GLN GLN ILE GLN ASP LEU LEU ASN GLN GLY TYR PHE ILE SEQRES 8 A 227 ILE LEU ASP ARG TYR ILE TYR SER GLY ILE ALA TYR THR SEQRES 9 A 227 LEU ALA LYS ASN ASP PHE HIS ASP GLU THR ILE SER GLN SEQRES 10 A 227 GLY LYS ASN LYS GLN GLN LEU ASN ASN ILE ASP TRP LEU SEQRES 11 A 227 LEU SER PRO ASP LYS GLY LEU PRO LYS PRO ASP LEU THR SEQRES 12 A 227 LEU PHE LEU THR LEU ASP LEU GLU GLU ILE SER LYS ARG SEQRES 13 A 227 LYS GLY TRP GLY ASP GLU ARG TYR GLU LEU GLN GLN PHE SEQRES 14 A 227 GLN ALA LYS VAL LYS GLN CYS PHE LEU GLU ILE LEU ASP SEQRES 15 A 227 THR ASN LYS ASP PRO THR ILE ARG ILE VAL ASP VAL GLY SEQRES 16 A 227 GLY LYS THR ILE ASP GLN VAL THR THR GLN LEU TRP GLU SEQRES 17 A 227 ILE ILE GLU THR ASN LYS ASN HIS GLU LEU ILE ASN ASP SEQRES 18 A 227 SER ILE GLN PHE ILE THR HET TMP A 301 21 HET ADP A 302 27 HET MG A 303 1 HET MG A 304 1 HETNAM TMP THYMIDINE-5'-PHOSPHATE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 2 TMP C10 H15 N2 O8 P FORMUL 3 ADP C10 H15 N5 O10 P2 FORMUL 4 MG 2(MG 2+) FORMUL 6 HOH *77(H2 O) HELIX 1 AA1 GLY A 16 LEU A 28 1 13 HELIX 2 AA2 THR A 41 ASN A 53 1 13 HELIX 3 AA3 SER A 59 GLN A 84 1 26 HELIX 4 AA4 TYR A 93 ALA A 103 1 11 HELIX 5 AA5 LYS A 104 PHE A 107 5 4 HELIX 6 AA6 ASN A 123 SER A 129 1 7 HELIX 7 AA7 PRO A 130 LYS A 132 5 3 HELIX 8 AA8 ASP A 146 LYS A 152 1 7 HELIX 9 AA9 LEU A 163 LEU A 178 1 16 HELIX 10 AB1 THR A 195 LYS A 211 1 17 SHEET 1 AA1 5 SER A 31 LYS A 35 0 SHEET 2 AA1 5 PHE A 87 ASP A 91 1 O ILE A 89 N ILE A 34 SHEET 3 AA1 5 LEU A 6 GLY A 11 1 N ILE A 9 O LEU A 90 SHEET 4 AA1 5 LEU A 139 THR A 144 1 O LEU A 141 N LEU A 8 SHEET 5 AA1 5 ILE A 186 ASP A 190 1 O VAL A 189 N PHE A 142 LINK OD1 ASP A 13 MG MG A 303 1555 1555 2.28 LINK OD1 ASP A 13 MG MG A 304 1555 1555 2.57 LINK OD2 ASP A 13 MG MG A 304 1555 1555 2.44 LINK O GLY A 155 MG MG A 304 1555 1555 2.55 LINK OE2 GLU A 162 MG MG A 304 1555 1555 2.84 LINK O3B ADP A 302 MG MG A 303 1555 1555 1.93 LINK MG MG A 303 O HOH A 424 1555 1555 2.49 LINK MG MG A 303 O HOH A 432 1555 1555 2.42 LINK MG MG A 303 O HOH A 454 1555 1555 2.24 LINK MG MG A 303 O HOH A 471 1555 1555 2.51 LINK MG MG A 304 O HOH A 450 1555 1555 2.41 CISPEP 1 SER A 29 PRO A 30 0 -9.42 CISPEP 2 PHE A 36 PRO A 37 0 0.22 SITE 1 AC1 17 LYS A 35 ARG A 39 LEU A 51 PHE A 67 SITE 2 AC1 17 ARG A 71 ARG A 92 GLY A 97 TYR A 100 SITE 3 AC1 17 TYR A 161 HOH A 411 HOH A 413 HOH A 424 SITE 4 AC1 17 HOH A 428 HOH A 430 HOH A 436 HOH A 440 SITE 5 AC1 17 HOH A 454 SITE 1 AC2 18 LEU A 12 ASP A 13 ARG A 14 SER A 15 SITE 2 AC2 18 GLY A 16 LYS A 17 SER A 18 THR A 19 SITE 3 AC2 18 ARG A 153 LYS A 154 LYS A 194 THR A 195 SITE 4 AC2 18 ILE A 196 MG A 303 HOH A 416 HOH A 417 SITE 5 AC2 18 HOH A 432 HOH A 443 SITE 1 AC3 6 ASP A 13 ADP A 302 HOH A 424 HOH A 432 SITE 2 AC3 6 HOH A 454 HOH A 471 SITE 1 AC4 4 ASP A 13 GLY A 155 GLU A 162 HOH A 450 CRYST1 69.965 69.965 116.161 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014293 0.008252 0.000000 0.00000 SCALE2 0.000000 0.016504 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008609 0.00000