HEADER ELECTRON TRANSPORT 17-JAN-17 5UJ5 TITLE SOLUTION STRUCTURE OF THE OXIDIZED IRON-SULFUR PROTEIN ADRENODOXIN TITLE 2 FROM ENCEPHALITOZOON CUNICULI. SEATTLE STRUCTURAL GENOMICS CENTER FOR TITLE 3 INFECTIOUS DISEASE TARGET ENCUA.00705.A COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADRENODOXIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: THE FIRST FOUR RESIDUES ARE PART OF THE N-TERMINAL TAG COMPND 6 USED FOR NTA PURIFICATION THAT REMAIN AFTER CLEAVAGE WITH HRV 3C COMPND 7 PROTEASE. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENCEPHALITOZOON CUNICULI; SOURCE 3 ORGANISM_COMMON: MICROSPORIDIAN PARASITE; SOURCE 4 ORGANISM_TAXID: 6035; SOURCE 5 GENE: ECU07_0600; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS INFECTIOUS DISEASES, MICROSPORIDOSIS, SSGCID, IRON-SULFUR PROTEIN, KEYWDS 2 STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 3 INFECTIOUS DISEASE, ELECTRON TRANSPORT EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.W.BUCHKO,SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE AUTHOR 2 (SSGCID) REVDAT 4 26-FEB-20 5UJ5 1 JRNL REVDAT 3 11-DEC-19 5UJ5 1 REMARK REVDAT 2 27-SEP-17 5UJ5 1 COMPND REVDAT 1 01-FEB-17 5UJ5 0 JRNL AUTH S.SHAHEEN,K.F.BARRETT,S.SUBRAMANIAN,S.L.M.ARNOLD, JRNL AUTH 2 J.A.LAUREANTI,P.J.MYLER,W.C.VAN VOORHIS,G.W.BUCHKO JRNL TITL SOLUTION STRUCTURE FOR AN ENCEPHALITOZOON CUNICULI JRNL TITL 2 ADRENODOXIN-LIKE PROTEIN IN THE OXIDIZED STATE. JRNL REF PROTEIN SCI. V. 29 809 2020 JRNL REFN ESSN 1469-896X JRNL PMID 31912584 JRNL DOI 10.1002/PRO.3818 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: DUE TO THE PARAMAGNETIC EFFECTS OF THE REMARK 3 IRON IN THE [2FE-2S] CLUSTER, AMIDES IN THE CLOSE NEIGHBOURHOOD REMARK 3 WERE NOT OBSERVABLE. THESE INCLUDED C54, C60, C63, AND C100. REMARK 3 RESTRAINTS TO FIX THE LIGAND AND THE SULFUR ATOMS OF THESE REMARK 3 CYSTEINE RESIDUES WERE ADDED BASED ON XRD STRUCTURES AND ARE REMARK 3 CONTAINED IN SSBOND.UPL AND SSBOND.LOL. REMARK 4 REMARK 4 5UJ5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1000225926. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 0.12 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 100 MM SODIUM CHLORIDE, 20 MM REMARK 210 TRIS, 1 MM DTT, 1 MM [U-99% 13C; REMARK 210 U-99% 15N] E5, 93% H2O/7% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-13C NOESY ALIPHATIC; 3D 1H REMARK 210 -13C NOESY AROMATIC; 3D HNCACB; REMARK 210 3D 1H-15N NOESY; 3D CBCA(CO)NH; REMARK 210 3D HNCO; 2D 1H-15N HSQC; 2D 1H- REMARK 210 13C HSQC ALIPHATIC; 2D 1H-13C REMARK 210 HSQC AROMATIC; DEUTERIUM REMARK 210 EXCHANGE; 3D C(CO)NH; 3D H(CCO) REMARK 210 NH; 2D HBCBCGCDHD REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; VXRS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : FELIX 2007, SPARKY 3.115, PSVS REMARK 210 1.5 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 4 -62.45 -100.45 REMARK 500 1 ALA A 10 68.27 -119.30 REMARK 500 1 ARG A 13 93.06 -67.79 REMARK 500 1 PRO A 15 -169.84 -69.74 REMARK 500 1 GLN A 27 176.27 179.71 REMARK 500 1 SER A 61 -67.70 -95.15 REMARK 500 1 CYS A 100 53.02 -140.44 REMARK 500 1 GLN A 101 98.14 -179.07 REMARK 500 2 SER A 9 103.37 -52.16 REMARK 500 2 ALA A 10 73.90 -152.13 REMARK 500 2 PRO A 15 -170.58 -69.72 REMARK 500 2 GLN A 27 176.25 179.21 REMARK 500 2 ALA A 53 103.11 -51.89 REMARK 500 2 ASN A 57 -73.25 -90.80 REMARK 500 2 THR A 62 100.13 -56.83 REMARK 500 2 PRO A 78 -175.30 -69.78 REMARK 500 2 GLN A 101 -179.53 -170.05 REMARK 500 2 LEU A 102 -61.22 -139.50 REMARK 500 2 ALA A 118 -176.34 -58.61 REMARK 500 2 ASP A 125 149.54 -175.25 REMARK 500 2 LYS A 128 73.63 57.35 REMARK 500 2 LYS A 130 69.19 -172.09 REMARK 500 2 PRO A 131 -173.16 -69.76 REMARK 500 3 PRO A 2 -174.73 -69.70 REMARK 500 3 SER A 9 147.33 -175.83 REMARK 500 3 PRO A 11 79.96 -69.76 REMARK 500 3 GLN A 27 176.22 179.86 REMARK 500 3 SER A 61 -170.77 -63.49 REMARK 500 3 THR A 62 99.17 -57.61 REMARK 500 3 HIS A 64 109.43 -164.53 REMARK 500 3 SER A 79 171.34 -58.09 REMARK 500 3 LEU A 98 -178.92 -179.06 REMARK 500 3 CYS A 100 -42.54 -144.78 REMARK 500 3 LYS A 120 173.13 -54.05 REMARK 500 3 ALA A 123 139.76 -176.81 REMARK 500 3 ASP A 125 130.55 -172.95 REMARK 500 3 PRO A 129 94.18 -69.86 REMARK 500 4 MET A 5 -64.59 -120.85 REMARK 500 4 ASP A 6 -179.93 -171.38 REMARK 500 4 ALA A 10 74.58 -178.32 REMARK 500 4 PRO A 11 78.05 -69.87 REMARK 500 4 ILE A 14 148.58 64.72 REMARK 500 4 PRO A 15 -170.27 -69.76 REMARK 500 4 GLN A 27 176.43 179.39 REMARK 500 4 SER A 37 -169.91 -77.83 REMARK 500 4 CYS A 63 30.84 -96.21 REMARK 500 4 HIS A 64 94.59 -62.43 REMARK 500 4 PRO A 78 -177.98 -69.80 REMARK 500 4 ALA A 118 -177.97 -174.68 REMARK 500 4 ALA A 123 176.63 -58.65 REMARK 500 REMARK 500 THIS ENTRY HAS 229 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 200 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 54 SG REMARK 620 2 FES A 200 S1 76.2 REMARK 620 3 FES A 200 S2 168.5 103.5 REMARK 620 4 CYS A 60 SG 107.9 163.0 75.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 200 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 63 SG REMARK 620 2 FES A 200 S1 176.0 REMARK 620 3 FES A 200 S2 75.3 101.5 REMARK 620 4 CYS A 100 SG 108.0 75.5 172.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FES A 200 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30231 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF THE OXIDIZED IRON-SULFUR PROTEIN ANDRENODOXIN REMARK 900 FROM ENCEPHALITOZOON CUNICULI. SEATTLE STRUCTURAL GENOMICS CENTER REMARK 900 FOR INFECTIOUS DISEASE TARGET ENCUA.00705.A REMARK 900 RELATED ID: SSGCID-ENCUA.00705.A RELATED DB: TARGETTRACK DBREF 5UJ5 A 5 132 UNP M1JK92 M1JK92_ENCCN 1 128 SEQADV 5UJ5 GLY A 1 UNP M1JK92 EXPRESSION TAG SEQADV 5UJ5 PRO A 2 UNP M1JK92 EXPRESSION TAG SEQADV 5UJ5 GLY A 3 UNP M1JK92 EXPRESSION TAG SEQADV 5UJ5 SER A 4 UNP M1JK92 EXPRESSION TAG SEQRES 1 A 132 GLY PRO GLY SER MET ASP MET PHE SER ALA PRO ASP ARG SEQRES 2 A 132 ILE PRO GLU GLN ILE ARG ILE PHE PHE LYS THR MET LYS SEQRES 3 A 132 GLN VAL VAL PRO ALA LYS ALA VAL CYS GLY SER THR VAL SEQRES 4 A 132 LEU ASP VAL ALA HIS LYS ASN GLY VAL ASP LEU GLU GLY SEQRES 5 A 132 ALA CYS GLU GLY ASN LEU ALA CYS SER THR CYS HIS VAL SEQRES 6 A 132 ILE LEU GLU GLU PRO LEU TYR ARG LYS LEU GLY GLU PRO SEQRES 7 A 132 SER ASP LYS GLU TYR ASP LEU ILE ASP GLN ALA PHE GLY SEQRES 8 A 132 ALA THR GLY THR SER ARG LEU GLY CYS GLN LEU ARG VAL SEQRES 9 A 132 ASP LYS SER PHE GLU ASN ALA VAL PHE THR VAL PRO ARG SEQRES 10 A 132 ALA THR LYS ASN MET ALA VAL ASP GLY PHE LYS PRO LYS SEQRES 11 A 132 PRO HIS HET FES A 200 4 HETNAM FES FE2/S2 (INORGANIC) CLUSTER FORMUL 2 FES FE2 S2 HELIX 1 AA1 THR A 38 GLY A 47 1 10 HELIX 2 AA2 GLU A 68 GLY A 76 1 9 HELIX 3 AA3 SER A 79 GLN A 88 1 10 HELIX 4 AA4 THR A 93 ARG A 97 5 5 HELIX 5 AA5 ASP A 105 GLU A 109 5 5 SHEET 1 AA1 4 VAL A 28 ALA A 33 0 SHEET 2 AA1 4 ILE A 18 THR A 24 -1 N PHE A 22 O VAL A 29 SHEET 3 AA1 4 VAL A 112 VAL A 115 1 O VAL A 115 N LYS A 23 SHEET 4 AA1 4 ILE A 66 LEU A 67 -1 N ILE A 66 O THR A 114 LINK SG CYS A 54 FE1 FES A 200 1555 1555 2.22 LINK SG CYS A 60 FE1 FES A 200 1555 1555 2.23 LINK SG CYS A 63 FE2 FES A 200 1555 1555 2.22 LINK SG CYS A 100 FE2 FES A 200 1555 1555 2.22 SITE 1 AC1 4 CYS A 54 CYS A 60 CYS A 63 CYS A 100 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1