HEADER OXIDOREDUCTASE 17-JAN-17 5UJF TITLE CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS DIHYDROFOLATE TITLE 2 REDUCTASE BOUND P218 INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROFOLATE REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.5.1.3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25618 / SOURCE 3 H37RV); SOURCE 4 ORGANISM_TAXID: 83332; SOURCE 5 STRAIN: ATCC 25618 / H37RV; SOURCE 6 GENE: FOLA, DFRA, RV2763C, MTV002.28C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS DHFR, FOLATE, P218, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS KEYWDS 2 CENTER FOR INFECTIOUS DISEASE, SSGCID, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 04-OCT-23 5UJF 1 REMARK REVDAT 1 01-FEB-17 5UJF 0 JRNL AUTH S.J.MAYCLIN,J.W.FAIRMAN,D.D.LORIMER,T.E.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS JRNL TITL 2 DIHYDROFOLATE REDUCTASE BOUND P218 INHIBITOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1615) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 9803 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.530 REMARK 3 FREE R VALUE TEST SET COUNT : 542 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.0000 - 3.6507 1.00 2413 142 0.1583 0.2109 REMARK 3 2 3.6507 - 2.8978 1.00 2308 132 0.1914 0.2477 REMARK 3 3 2.8978 - 2.5315 1.00 2252 162 0.2075 0.2337 REMARK 3 4 2.5315 - 2.3001 1.00 2288 106 0.2247 0.2668 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.080 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.28 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1271 REMARK 3 ANGLE : 0.911 1737 REMARK 3 CHIRALITY : 0.036 187 REMARK 3 PLANARITY : 0.005 221 REMARK 3 DIHEDRAL : 12.426 433 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -1 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.8634 -23.0785 -6.3324 REMARK 3 T TENSOR REMARK 3 T11: 0.3619 T22: 0.2781 REMARK 3 T33: 0.3304 T12: -0.0892 REMARK 3 T13: -0.0193 T23: -0.0182 REMARK 3 L TENSOR REMARK 3 L11: 2.7307 L22: 1.8610 REMARK 3 L33: 2.9169 L12: -0.4647 REMARK 3 L13: -0.1317 L23: 0.7251 REMARK 3 S TENSOR REMARK 3 S11: 0.2238 S12: -0.1802 S13: 0.1030 REMARK 3 S21: 0.3955 S22: -0.0306 S23: -0.1126 REMARK 3 S31: 0.1678 S32: -0.1473 S33: -0.2003 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.5202 -31.2864 -3.7233 REMARK 3 T TENSOR REMARK 3 T11: 0.6243 T22: 0.3340 REMARK 3 T33: 0.4451 T12: -0.0317 REMARK 3 T13: -0.0775 T23: -0.0469 REMARK 3 L TENSOR REMARK 3 L11: 1.4612 L22: 3.6394 REMARK 3 L33: 8.2980 L12: 0.0805 REMARK 3 L13: 0.5424 L23: -2.6452 REMARK 3 S TENSOR REMARK 3 S11: 0.0713 S12: 0.0703 S13: -0.4652 REMARK 3 S21: 0.1501 S22: 0.1262 S23: -0.0579 REMARK 3 S31: 1.8264 S32: -0.1633 S33: -0.1743 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 50 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.6018 -38.7063 -4.0722 REMARK 3 T TENSOR REMARK 3 T11: 1.1610 T22: 0.5016 REMARK 3 T33: 0.8015 T12: -0.1141 REMARK 3 T13: -0.0509 T23: -0.0834 REMARK 3 L TENSOR REMARK 3 L11: 8.2344 L22: 2.3158 REMARK 3 L33: 4.6702 L12: 0.7155 REMARK 3 L13: -1.4741 L23: -2.5284 REMARK 3 S TENSOR REMARK 3 S11: -0.2404 S12: 0.6134 S13: -2.1448 REMARK 3 S21: -0.4095 S22: 0.2913 S23: -0.4919 REMARK 3 S31: 1.8779 S32: -0.4169 S33: -0.0377 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 61 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.2516 -37.2528 8.3665 REMARK 3 T TENSOR REMARK 3 T11: 1.0740 T22: 0.5744 REMARK 3 T33: 0.6376 T12: -0.0972 REMARK 3 T13: -0.1293 T23: 0.1924 REMARK 3 L TENSOR REMARK 3 L11: 7.3735 L22: 6.8750 REMARK 3 L33: 5.5033 L12: 1.1172 REMARK 3 L13: 0.2236 L23: 1.3486 REMARK 3 S TENSOR REMARK 3 S11: 0.5012 S12: -0.5817 S13: -1.1428 REMARK 3 S21: 0.3884 S22: -0.5102 S23: 0.0560 REMARK 3 S31: 1.5426 S32: -0.4621 S33: -0.1867 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 77 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.8235 -31.6515 12.3245 REMARK 3 T TENSOR REMARK 3 T11: 1.4260 T22: 0.9769 REMARK 3 T33: 0.4814 T12: -0.3234 REMARK 3 T13: -0.2942 T23: 0.2636 REMARK 3 L TENSOR REMARK 3 L11: 8.9235 L22: 7.1606 REMARK 3 L33: 6.3539 L12: 0.1221 REMARK 3 L13: -5.0431 L23: 4.8917 REMARK 3 S TENSOR REMARK 3 S11: 0.3020 S12: -2.2294 S13: 0.3489 REMARK 3 S21: -0.3083 S22: 0.7306 S23: 0.1100 REMARK 3 S31: -0.3089 S32: 1.7840 S33: -0.2563 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 88 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.9175 -21.9791 1.7711 REMARK 3 T TENSOR REMARK 3 T11: 0.4323 T22: 0.3086 REMARK 3 T33: 0.3450 T12: -0.0898 REMARK 3 T13: -0.0120 T23: -0.0556 REMARK 3 L TENSOR REMARK 3 L11: 2.5021 L22: 2.8957 REMARK 3 L33: 6.9357 L12: 1.1974 REMARK 3 L13: 0.4383 L23: 1.3612 REMARK 3 S TENSOR REMARK 3 S11: 0.2049 S12: -0.3281 S13: -0.1028 REMARK 3 S21: 0.5795 S22: 0.0247 S23: -0.0088 REMARK 3 S31: 0.1533 S32: 0.6090 S33: -0.2370 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5643 -18.1606 -10.2141 REMARK 3 T TENSOR REMARK 3 T11: 0.5427 T22: 0.6988 REMARK 3 T33: 0.9292 T12: 0.0533 REMARK 3 T13: 0.1115 T23: 0.0875 REMARK 3 L TENSOR REMARK 3 L11: 6.8370 L22: 3.0173 REMARK 3 L33: 4.1298 L12: 3.0630 REMARK 3 L13: -5.0245 L23: -3.0469 REMARK 3 S TENSOR REMARK 3 S11: 1.1870 S12: 0.8861 S13: 1.5142 REMARK 3 S21: 0.8840 S22: 0.5486 S23: 1.9395 REMARK 3 S31: -0.9891 S32: -1.7214 S33: -1.6829 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 126 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.7199 -11.5583 -0.9774 REMARK 3 T TENSOR REMARK 3 T11: 0.5408 T22: 0.4087 REMARK 3 T33: 0.3502 T12: -0.1730 REMARK 3 T13: 0.0311 T23: -0.0277 REMARK 3 L TENSOR REMARK 3 L11: 1.2507 L22: 5.2539 REMARK 3 L33: 5.3183 L12: 1.1808 REMARK 3 L13: 2.5301 L23: 2.3792 REMARK 3 S TENSOR REMARK 3 S11: -0.5015 S12: 0.5408 S13: 0.2442 REMARK 3 S21: -0.3342 S22: 0.4776 S23: -0.2923 REMARK 3 S31: -0.4039 S32: 0.7058 S33: 0.0603 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 140 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.9496 -17.2446 -13.8294 REMARK 3 T TENSOR REMARK 3 T11: 0.3466 T22: 0.4210 REMARK 3 T33: 0.3724 T12: -0.0640 REMARK 3 T13: 0.0571 T23: -0.0786 REMARK 3 L TENSOR REMARK 3 L11: 2.5586 L22: 1.7076 REMARK 3 L33: 4.8486 L12: -0.2707 REMARK 3 L13: -0.9229 L23: -1.9338 REMARK 3 S TENSOR REMARK 3 S11: -0.2275 S12: -0.1025 S13: 0.3693 REMARK 3 S21: -0.3905 S22: -0.1893 S23: -0.1743 REMARK 3 S31: -1.4977 S32: 0.2012 S33: 0.1379 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UJF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1000225967. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9811 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.468 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.2900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.61 REMARK 200 R MERGE FOR SHELL (I) : 0.56700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.130 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1DF7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTAL SCREEN HT CONDITION C6: 200MM REMARK 280 AMMONIUM SULFATE, 30% (W/V) PEG 8000, PROTEIN CONC. 10 MG/ML, REMARK 280 CRYO 20% ETHYLENE GLYCOL, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.44667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.22333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 34.22333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 68.44667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -93.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -34.22333 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A -1 CG ND1 CD2 CE1 NE2 REMARK 470 MET A 0 CG SD CE REMARK 470 MET A 1 CG SD CE REMARK 470 GLU A 33 CG CD OE1 OE2 REMARK 470 LYS A 53 CG CD CE NZ REMARK 470 SER A 66 OG REMARK 470 ARG A 67 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 68 CG CD OE1 NE2 REMARK 470 ASP A 70 CG OD1 OD2 REMARK 470 MET A 72 CG SD CE REMARK 470 SER A 74 OG REMARK 470 GLU A 83 CG CD OE1 OE2 REMARK 470 GLU A 84 CG CD OE1 OE2 REMARK 470 SER A 88 OG REMARK 470 GLU A 90 CG CD OE1 OE2 REMARK 470 GLN A 98 CG CD OE1 NE2 REMARK 470 ARG A 121 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 138 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 54 47.47 -109.97 REMARK 500 ALA A 73 115.42 -161.65 REMARK 500 LEU A 86 48.91 -97.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MMV A 205 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-MYTUD.01062.A RELATED DB: TARGETTRACK DBREF 5UJF A 1 159 UNP P9WNX1 DYR_MYCTU 3 161 SEQADV 5UJF MET A -20 UNP P9WNX1 INITIATING METHIONINE SEQADV 5UJF GLY A -19 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF SER A -18 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF SER A -17 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF HIS A -16 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF HIS A -15 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF HIS A -14 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF HIS A -13 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF HIS A -12 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF HIS A -11 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF SER A -10 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF SER A -9 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF GLY A -8 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF LEU A -7 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF VAL A -6 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF PRO A -5 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF ARG A -4 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF GLY A -3 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF SER A -2 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF HIS A -1 UNP P9WNX1 EXPRESSION TAG SEQADV 5UJF MET A 0 UNP P9WNX1 EXPRESSION TAG SEQRES 1 A 180 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 180 LEU VAL PRO ARG GLY SER HIS MET MET VAL GLY LEU ILE SEQRES 3 A 180 TRP ALA GLN ALA THR SER GLY VAL ILE GLY ARG GLY GLY SEQRES 4 A 180 ASP ILE PRO TRP ARG LEU PRO GLU ASP GLN ALA HIS PHE SEQRES 5 A 180 ARG GLU ILE THR MET GLY HIS THR ILE VAL MET GLY ARG SEQRES 6 A 180 ARG THR TRP ASP SER LEU PRO ALA LYS VAL ARG PRO LEU SEQRES 7 A 180 PRO GLY ARG ARG ASN VAL VAL LEU SER ARG GLN ALA ASP SEQRES 8 A 180 PHE MET ALA SER GLY ALA GLU VAL VAL GLY SER LEU GLU SEQRES 9 A 180 GLU ALA LEU THR SER PRO GLU THR TRP VAL ILE GLY GLY SEQRES 10 A 180 GLY GLN VAL TYR ALA LEU ALA LEU PRO TYR ALA THR ARG SEQRES 11 A 180 CYS GLU VAL THR GLU VAL ASP ILE GLY LEU PRO ARG GLU SEQRES 12 A 180 ALA GLY ASP ALA LEU ALA PRO VAL LEU ASP GLU THR TRP SEQRES 13 A 180 ARG GLY GLU THR GLY GLU TRP ARG PHE SER ARG SER GLY SEQRES 14 A 180 LEU ARG TYR ARG LEU TYR SER TYR HIS ARG SER HET SO4 A 201 5 HET SO4 A 202 5 HET SO4 A 203 5 HET EDO A 204 4 HET MMV A 205 26 HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM MMV 3-(2-{3-[(2,4-DIAMINO-6-ETHYLPYRIMIDIN-5-YL) HETNAM 2 MMV OXY]PROPOXY}PHENYL)PROPANOIC ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 2 SO4 3(O4 S 2-) FORMUL 5 EDO C2 H6 O2 FORMUL 6 MMV C18 H24 N4 O4 FORMUL 7 HOH *29(H2 O) HELIX 1 AA1 LEU A 24 MET A 36 1 13 HELIX 2 AA2 ARG A 44 LEU A 50 1 7 HELIX 3 AA3 PRO A 51 ARG A 55 5 5 HELIX 4 AA4 SER A 81 LEU A 86 1 6 HELIX 5 AA5 GLY A 96 LEU A 104 1 9 SHEET 1 AA1 8 GLU A 77 VAL A 79 0 SHEET 2 AA1 8 ARG A 61 LEU A 65 1 N VAL A 64 O VAL A 79 SHEET 3 AA1 8 THR A 39 GLY A 43 1 N MET A 42 O LEU A 65 SHEET 4 AA1 8 GLU A 90 VAL A 93 1 O TRP A 92 N THR A 39 SHEET 5 AA1 8 MET A 1 ALA A 9 1 N GLY A 3 O THR A 91 SHEET 6 AA1 8 ALA A 107 VAL A 115 1 O VAL A 115 N GLN A 8 SHEET 7 AA1 8 ARG A 150 HIS A 157 -1 O TYR A 156 N CYS A 110 SHEET 8 AA1 8 ARG A 136 THR A 139 -1 N ARG A 136 O HIS A 157 SHEET 1 AA2 8 GLU A 77 VAL A 79 0 SHEET 2 AA2 8 ARG A 61 LEU A 65 1 N VAL A 64 O VAL A 79 SHEET 3 AA2 8 THR A 39 GLY A 43 1 N MET A 42 O LEU A 65 SHEET 4 AA2 8 GLU A 90 VAL A 93 1 O TRP A 92 N THR A 39 SHEET 5 AA2 8 MET A 1 ALA A 9 1 N GLY A 3 O THR A 91 SHEET 6 AA2 8 ALA A 107 VAL A 115 1 O VAL A 115 N GLN A 8 SHEET 7 AA2 8 ARG A 150 HIS A 157 -1 O TYR A 156 N CYS A 110 SHEET 8 AA2 8 ARG A 143 PHE A 144 -1 N ARG A 143 O TYR A 151 CISPEP 1 ARG A 55 PRO A 56 0 3.25 CISPEP 2 GLY A 95 GLY A 96 0 2.14 SITE 1 AC1 2 ARG A 23 ARG A 146 SITE 1 AC2 8 GLY A 43 ARG A 45 THR A 46 GLY A 96 SITE 2 AC2 8 VAL A 99 GLU A 133 HOH A 315 HOH A 319 SITE 1 AC3 4 ARG A 44 SER A 66 ARG A 67 GLN A 68 SITE 1 AC4 3 GLN A 8 TYR A 156 HOH A 304 SITE 1 AC5 15 ILE A 5 TRP A 6 GLY A 17 ASP A 27 SITE 2 AC5 15 GLN A 28 PHE A 31 ARG A 32 LEU A 50 SITE 3 AC5 15 VAL A 54 ARG A 60 ILE A 94 TYR A 100 SITE 4 AC5 15 THR A 113 HOH A 312 HOH A 313 CRYST1 59.490 59.490 102.670 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016810 0.009705 0.000000 0.00000 SCALE2 0.000000 0.019410 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009740 0.00000