HEADER OXIDOREDUCTASE 17-JAN-17 5UJF
TITLE CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS DIHYDROFOLATE
TITLE 2 REDUCTASE BOUND P218 INHIBITOR
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: DIHYDROFOLATE REDUCTASE;
COMPND 3 CHAIN: A;
COMPND 4 EC: 1.5.1.3;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25618 /
SOURCE 3 H37RV);
SOURCE 4 ORGANISM_TAXID: 83332;
SOURCE 5 STRAIN: ATCC 25618 / H37RV;
SOURCE 6 GENE: FOLA, DFRA, RV2763C, MTV002.28C;
SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);
SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID
KEYWDS DHFR, FOLATE, P218, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS
KEYWDS 2 CENTER FOR INFECTIOUS DISEASE, SSGCID, OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID)
REVDAT 2 04-OCT-23 5UJF 1 REMARK
REVDAT 1 01-FEB-17 5UJF 0
JRNL AUTH S.J.MAYCLIN,J.W.FAIRMAN,D.D.LORIMER,T.E.EDWARDS
JRNL TITL CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS
JRNL TITL 2 DIHYDROFOLATE REDUCTASE BOUND P218 INHIBITOR
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. 2.30 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1615)
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : NULL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 3 NUMBER OF REFLECTIONS : 9803
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.181
REMARK 3 R VALUE (WORKING SET) : 0.179
REMARK 3 FREE R VALUE : 0.227
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.530
REMARK 3 FREE R VALUE TEST SET COUNT : 542
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 50.0000 - 3.6507 1.00 2413 142 0.1583 0.2109
REMARK 3 2 3.6507 - 2.8978 1.00 2308 132 0.1914 0.2477
REMARK 3 3 2.8978 - 2.5315 1.00 2252 162 0.2075 0.2337
REMARK 3 4 2.5315 - 2.3001 1.00 2288 106 0.2247 0.2668
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : NULL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.080
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 45.28
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.14
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.007 1271
REMARK 3 ANGLE : 0.911 1737
REMARK 3 CHIRALITY : 0.036 187
REMARK 3 PLANARITY : 0.005 221
REMARK 3 DIHEDRAL : 12.426 433
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 9
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: CHAIN 'A' AND (RESID -1 THROUGH 24 )
REMARK 3 ORIGIN FOR THE GROUP (A): 20.8634 -23.0785 -6.3324
REMARK 3 T TENSOR
REMARK 3 T11: 0.3619 T22: 0.2781
REMARK 3 T33: 0.3304 T12: -0.0892
REMARK 3 T13: -0.0193 T23: -0.0182
REMARK 3 L TENSOR
REMARK 3 L11: 2.7307 L22: 1.8610
REMARK 3 L33: 2.9169 L12: -0.4647
REMARK 3 L13: -0.1317 L23: 0.7251
REMARK 3 S TENSOR
REMARK 3 S11: 0.2238 S12: -0.1802 S13: 0.1030
REMARK 3 S21: 0.3955 S22: -0.0306 S23: -0.1126
REMARK 3 S31: 0.1678 S32: -0.1473 S33: -0.2003
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 49 )
REMARK 3 ORIGIN FOR THE GROUP (A): 25.5202 -31.2864 -3.7233
REMARK 3 T TENSOR
REMARK 3 T11: 0.6243 T22: 0.3340
REMARK 3 T33: 0.4451 T12: -0.0317
REMARK 3 T13: -0.0775 T23: -0.0469
REMARK 3 L TENSOR
REMARK 3 L11: 1.4612 L22: 3.6394
REMARK 3 L33: 8.2980 L12: 0.0805
REMARK 3 L13: 0.5424 L23: -2.6452
REMARK 3 S TENSOR
REMARK 3 S11: 0.0713 S12: 0.0703 S13: -0.4652
REMARK 3 S21: 0.1501 S22: 0.1262 S23: -0.0579
REMARK 3 S31: 1.8264 S32: -0.1633 S33: -0.1743
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 50 THROUGH 60 )
REMARK 3 ORIGIN FOR THE GROUP (A): 23.6018 -38.7063 -4.0722
REMARK 3 T TENSOR
REMARK 3 T11: 1.1610 T22: 0.5016
REMARK 3 T33: 0.8015 T12: -0.1141
REMARK 3 T13: -0.0509 T23: -0.0834
REMARK 3 L TENSOR
REMARK 3 L11: 8.2344 L22: 2.3158
REMARK 3 L33: 4.6702 L12: 0.7155
REMARK 3 L13: -1.4741 L23: -2.5284
REMARK 3 S TENSOR
REMARK 3 S11: -0.2404 S12: 0.6134 S13: -2.1448
REMARK 3 S21: -0.4095 S22: 0.2913 S23: -0.4919
REMARK 3 S31: 1.8779 S32: -0.4169 S33: -0.0377
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 61 THROUGH 76 )
REMARK 3 ORIGIN FOR THE GROUP (A): 21.2516 -37.2528 8.3665
REMARK 3 T TENSOR
REMARK 3 T11: 1.0740 T22: 0.5744
REMARK 3 T33: 0.6376 T12: -0.0972
REMARK 3 T13: -0.1293 T23: 0.1924
REMARK 3 L TENSOR
REMARK 3 L11: 7.3735 L22: 6.8750
REMARK 3 L33: 5.5033 L12: 1.1172
REMARK 3 L13: 0.2236 L23: 1.3486
REMARK 3 S TENSOR
REMARK 3 S11: 0.5012 S12: -0.5817 S13: -1.1428
REMARK 3 S21: 0.3884 S22: -0.5102 S23: 0.0560
REMARK 3 S31: 1.5426 S32: -0.4621 S33: -0.1867
REMARK 3 TLS GROUP : 5
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 77 THROUGH 87 )
REMARK 3 ORIGIN FOR THE GROUP (A): 26.8235 -31.6515 12.3245
REMARK 3 T TENSOR
REMARK 3 T11: 1.4260 T22: 0.9769
REMARK 3 T33: 0.4814 T12: -0.3234
REMARK 3 T13: -0.2942 T23: 0.2636
REMARK 3 L TENSOR
REMARK 3 L11: 8.9235 L22: 7.1606
REMARK 3 L33: 6.3539 L12: 0.1221
REMARK 3 L13: -5.0431 L23: 4.8917
REMARK 3 S TENSOR
REMARK 3 S11: 0.3020 S12: -2.2294 S13: 0.3489
REMARK 3 S21: -0.3083 S22: 0.7306 S23: 0.1100
REMARK 3 S31: -0.3089 S32: 1.7840 S33: -0.2563
REMARK 3 TLS GROUP : 6
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 88 THROUGH 115 )
REMARK 3 ORIGIN FOR THE GROUP (A): 26.9175 -21.9791 1.7711
REMARK 3 T TENSOR
REMARK 3 T11: 0.4323 T22: 0.3086
REMARK 3 T33: 0.3450 T12: -0.0898
REMARK 3 T13: -0.0120 T23: -0.0556
REMARK 3 L TENSOR
REMARK 3 L11: 2.5021 L22: 2.8957
REMARK 3 L33: 6.9357 L12: 1.1974
REMARK 3 L13: 0.4383 L23: 1.3612
REMARK 3 S TENSOR
REMARK 3 S11: 0.2049 S12: -0.3281 S13: -0.1028
REMARK 3 S21: 0.5795 S22: 0.0247 S23: -0.0088
REMARK 3 S31: 0.1533 S32: 0.6090 S33: -0.2370
REMARK 3 TLS GROUP : 7
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 125 )
REMARK 3 ORIGIN FOR THE GROUP (A): 10.5643 -18.1606 -10.2141
REMARK 3 T TENSOR
REMARK 3 T11: 0.5427 T22: 0.6988
REMARK 3 T33: 0.9292 T12: 0.0533
REMARK 3 T13: 0.1115 T23: 0.0875
REMARK 3 L TENSOR
REMARK 3 L11: 6.8370 L22: 3.0173
REMARK 3 L33: 4.1298 L12: 3.0630
REMARK 3 L13: -5.0245 L23: -3.0469
REMARK 3 S TENSOR
REMARK 3 S11: 1.1870 S12: 0.8861 S13: 1.5142
REMARK 3 S21: 0.8840 S22: 0.5486 S23: 1.9395
REMARK 3 S31: -0.9891 S32: -1.7214 S33: -1.6829
REMARK 3 TLS GROUP : 8
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 126 THROUGH 139 )
REMARK 3 ORIGIN FOR THE GROUP (A): 26.7199 -11.5583 -0.9774
REMARK 3 T TENSOR
REMARK 3 T11: 0.5408 T22: 0.4087
REMARK 3 T33: 0.3502 T12: -0.1730
REMARK 3 T13: 0.0311 T23: -0.0277
REMARK 3 L TENSOR
REMARK 3 L11: 1.2507 L22: 5.2539
REMARK 3 L33: 5.3183 L12: 1.1808
REMARK 3 L13: 2.5301 L23: 2.3792
REMARK 3 S TENSOR
REMARK 3 S11: -0.5015 S12: 0.5408 S13: 0.2442
REMARK 3 S21: -0.3342 S22: 0.4776 S23: -0.2923
REMARK 3 S31: -0.4039 S32: 0.7058 S33: 0.0603
REMARK 3 TLS GROUP : 9
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 140 THROUGH 159 )
REMARK 3 ORIGIN FOR THE GROUP (A): 27.9496 -17.2446 -13.8294
REMARK 3 T TENSOR
REMARK 3 T11: 0.3466 T22: 0.4210
REMARK 3 T33: 0.3724 T12: -0.0640
REMARK 3 T13: 0.0571 T23: -0.0786
REMARK 3 L TENSOR
REMARK 3 L11: 2.5586 L22: 1.7076
REMARK 3 L33: 4.8486 L12: -0.2707
REMARK 3 L13: -0.9229 L23: -1.9338
REMARK 3 S TENSOR
REMARK 3 S11: -0.2275 S12: -0.1025 S13: 0.3693
REMARK 3 S21: -0.3905 S22: -0.1893 S23: -0.1743
REMARK 3 S31: -1.4977 S32: 0.2012 S33: 0.1379
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 5UJF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JAN-17.
REMARK 100 THE DEPOSITION ID IS D_1000225967.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 20-FEB-14
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 21-ID-F
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : XSCALE
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9811
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 200 DATA REDUNDANCY : 7.468
REMARK 200 R MERGE (I) : 0.04700
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 29.2900
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36
REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9
REMARK 200 DATA REDUNDANCY IN SHELL : 7.61
REMARK 200 R MERGE FOR SHELL (I) : 0.56700
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.130
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 1DF7
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 52.00
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTAL SCREEN HT CONDITION C6: 200MM
REMARK 280 AMMONIUM SULFATE, 30% (W/V) PEG 8000, PROTEIN CONC. 10 MG/ML,
REMARK 280 CRYO 20% ETHYLENE GLYCOL, PH 7.5, VAPOR DIFFUSION, SITTING DROP,
REMARK 280 TEMPERATURE 289K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+2/3
REMARK 290 3555 -X+Y,-X,Z+1/3
REMARK 290 4555 Y,X,-Z
REMARK 290 5555 X-Y,-Y,-Z+1/3
REMARK 290 6555 -X,-X+Y,-Z+2/3
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.44667
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.22333
REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 34.22333
REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 68.44667
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 2370 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 15310 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -93.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -34.22333
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A -20
REMARK 465 GLY A -19
REMARK 465 SER A -18
REMARK 465 SER A -17
REMARK 465 HIS A -16
REMARK 465 HIS A -15
REMARK 465 HIS A -14
REMARK 465 HIS A -13
REMARK 465 HIS A -12
REMARK 465 HIS A -11
REMARK 465 SER A -10
REMARK 465 SER A -9
REMARK 465 GLY A -8
REMARK 465 LEU A -7
REMARK 465 VAL A -6
REMARK 465 PRO A -5
REMARK 465 ARG A -4
REMARK 465 GLY A -3
REMARK 465 SER A -2
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 HIS A -1 CG ND1 CD2 CE1 NE2
REMARK 470 MET A 0 CG SD CE
REMARK 470 MET A 1 CG SD CE
REMARK 470 GLU A 33 CG CD OE1 OE2
REMARK 470 LYS A 53 CG CD CE NZ
REMARK 470 SER A 66 OG
REMARK 470 ARG A 67 CG CD NE CZ NH1 NH2
REMARK 470 GLN A 68 CG CD OE1 NE2
REMARK 470 ASP A 70 CG OD1 OD2
REMARK 470 MET A 72 CG SD CE
REMARK 470 SER A 74 OG
REMARK 470 GLU A 83 CG CD OE1 OE2
REMARK 470 GLU A 84 CG CD OE1 OE2
REMARK 470 SER A 88 OG
REMARK 470 GLU A 90 CG CD OE1 OE2
REMARK 470 GLN A 98 CG CD OE1 NE2
REMARK 470 ARG A 121 CG CD NE CZ NH1 NH2
REMARK 470 GLU A 138 CG CD OE1 OE2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 VAL A 54 47.47 -109.97
REMARK 500 ALA A 73 115.42 -161.65
REMARK 500 LEU A 86 48.91 -97.91
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 202
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 203
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 204
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue MMV A 205
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: SSGCID-MYTUD.01062.A RELATED DB: TARGETTRACK
DBREF 5UJF A 1 159 UNP P9WNX1 DYR_MYCTU 3 161
SEQADV 5UJF MET A -20 UNP P9WNX1 INITIATING METHIONINE
SEQADV 5UJF GLY A -19 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF SER A -18 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF SER A -17 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF HIS A -16 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF HIS A -15 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF HIS A -14 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF HIS A -13 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF HIS A -12 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF HIS A -11 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF SER A -10 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF SER A -9 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF GLY A -8 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF LEU A -7 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF VAL A -6 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF PRO A -5 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF ARG A -4 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF GLY A -3 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF SER A -2 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF HIS A -1 UNP P9WNX1 EXPRESSION TAG
SEQADV 5UJF MET A 0 UNP P9WNX1 EXPRESSION TAG
SEQRES 1 A 180 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY
SEQRES 2 A 180 LEU VAL PRO ARG GLY SER HIS MET MET VAL GLY LEU ILE
SEQRES 3 A 180 TRP ALA GLN ALA THR SER GLY VAL ILE GLY ARG GLY GLY
SEQRES 4 A 180 ASP ILE PRO TRP ARG LEU PRO GLU ASP GLN ALA HIS PHE
SEQRES 5 A 180 ARG GLU ILE THR MET GLY HIS THR ILE VAL MET GLY ARG
SEQRES 6 A 180 ARG THR TRP ASP SER LEU PRO ALA LYS VAL ARG PRO LEU
SEQRES 7 A 180 PRO GLY ARG ARG ASN VAL VAL LEU SER ARG GLN ALA ASP
SEQRES 8 A 180 PHE MET ALA SER GLY ALA GLU VAL VAL GLY SER LEU GLU
SEQRES 9 A 180 GLU ALA LEU THR SER PRO GLU THR TRP VAL ILE GLY GLY
SEQRES 10 A 180 GLY GLN VAL TYR ALA LEU ALA LEU PRO TYR ALA THR ARG
SEQRES 11 A 180 CYS GLU VAL THR GLU VAL ASP ILE GLY LEU PRO ARG GLU
SEQRES 12 A 180 ALA GLY ASP ALA LEU ALA PRO VAL LEU ASP GLU THR TRP
SEQRES 13 A 180 ARG GLY GLU THR GLY GLU TRP ARG PHE SER ARG SER GLY
SEQRES 14 A 180 LEU ARG TYR ARG LEU TYR SER TYR HIS ARG SER
HET SO4 A 201 5
HET SO4 A 202 5
HET SO4 A 203 5
HET EDO A 204 4
HET MMV A 205 26
HETNAM SO4 SULFATE ION
HETNAM EDO 1,2-ETHANEDIOL
HETNAM MMV 3-(2-{3-[(2,4-DIAMINO-6-ETHYLPYRIMIDIN-5-YL)
HETNAM 2 MMV OXY]PROPOXY}PHENYL)PROPANOIC ACID
HETSYN EDO ETHYLENE GLYCOL
FORMUL 2 SO4 3(O4 S 2-)
FORMUL 5 EDO C2 H6 O2
FORMUL 6 MMV C18 H24 N4 O4
FORMUL 7 HOH *29(H2 O)
HELIX 1 AA1 LEU A 24 MET A 36 1 13
HELIX 2 AA2 ARG A 44 LEU A 50 1 7
HELIX 3 AA3 PRO A 51 ARG A 55 5 5
HELIX 4 AA4 SER A 81 LEU A 86 1 6
HELIX 5 AA5 GLY A 96 LEU A 104 1 9
SHEET 1 AA1 8 GLU A 77 VAL A 79 0
SHEET 2 AA1 8 ARG A 61 LEU A 65 1 N VAL A 64 O VAL A 79
SHEET 3 AA1 8 THR A 39 GLY A 43 1 N MET A 42 O LEU A 65
SHEET 4 AA1 8 GLU A 90 VAL A 93 1 O TRP A 92 N THR A 39
SHEET 5 AA1 8 MET A 1 ALA A 9 1 N GLY A 3 O THR A 91
SHEET 6 AA1 8 ALA A 107 VAL A 115 1 O VAL A 115 N GLN A 8
SHEET 7 AA1 8 ARG A 150 HIS A 157 -1 O TYR A 156 N CYS A 110
SHEET 8 AA1 8 ARG A 136 THR A 139 -1 N ARG A 136 O HIS A 157
SHEET 1 AA2 8 GLU A 77 VAL A 79 0
SHEET 2 AA2 8 ARG A 61 LEU A 65 1 N VAL A 64 O VAL A 79
SHEET 3 AA2 8 THR A 39 GLY A 43 1 N MET A 42 O LEU A 65
SHEET 4 AA2 8 GLU A 90 VAL A 93 1 O TRP A 92 N THR A 39
SHEET 5 AA2 8 MET A 1 ALA A 9 1 N GLY A 3 O THR A 91
SHEET 6 AA2 8 ALA A 107 VAL A 115 1 O VAL A 115 N GLN A 8
SHEET 7 AA2 8 ARG A 150 HIS A 157 -1 O TYR A 156 N CYS A 110
SHEET 8 AA2 8 ARG A 143 PHE A 144 -1 N ARG A 143 O TYR A 151
CISPEP 1 ARG A 55 PRO A 56 0 3.25
CISPEP 2 GLY A 95 GLY A 96 0 2.14
SITE 1 AC1 2 ARG A 23 ARG A 146
SITE 1 AC2 8 GLY A 43 ARG A 45 THR A 46 GLY A 96
SITE 2 AC2 8 VAL A 99 GLU A 133 HOH A 315 HOH A 319
SITE 1 AC3 4 ARG A 44 SER A 66 ARG A 67 GLN A 68
SITE 1 AC4 3 GLN A 8 TYR A 156 HOH A 304
SITE 1 AC5 15 ILE A 5 TRP A 6 GLY A 17 ASP A 27
SITE 2 AC5 15 GLN A 28 PHE A 31 ARG A 32 LEU A 50
SITE 3 AC5 15 VAL A 54 ARG A 60 ILE A 94 TYR A 100
SITE 4 AC5 15 THR A 113 HOH A 312 HOH A 313
CRYST1 59.490 59.490 102.670 90.00 90.00 120.00 P 32 2 1 6
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016810 0.009705 0.000000 0.00000
SCALE2 0.000000 0.019410 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009740 0.00000