HEADER OXIDOREDUCTASE 26-JAN-17 5UM7 TITLE CRYSTAL STRUCTURE OF THE REDUCED STATE OF THE THIOL-DISULFIDE TITLE 2 REDUCTASE SDBA FROM STREPTOCOCCUS GORDONII COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOREDOXIN SIGNATURE PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS GORDONII (STRAIN CHALLIS / ATCC SOURCE 3 35105 / BCRC 15272 / CH1 / DL1 / V288); SOURCE 4 ORGANISM_TAXID: 467705; SOURCE 5 STRAIN: CHALLIS / ATCC 35105 / BCRC 15272 / CH1 / DL1 / V288; SOURCE 6 GENE: SGO_2006; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)GOLD; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS THIOREDOXIN-LIKE DOMAIN, ALPHA-BETA PROTEIN, OXIDOREDUCTASE, KEYWDS 2 STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 3 DISEASES, CSGID, NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS KEYWDS 4 DISEASES, NIAID EXPDTA X-RAY DIFFRACTION AUTHOR P.J.STOGIOS,E.EVDOKIMOVA,Z.WAWRZAK,V.YIM,A.SAVCHENKO,W.F.ANDERSON, AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 4 04-OCT-23 5UM7 1 REMARK REVDAT 3 11-DEC-19 5UM7 1 JRNL REVDAT 2 27-SEP-17 5UM7 1 REMARK REVDAT 1 15-FEB-17 5UM7 0 JRNL AUTH P.J.STOGIOS JRNL TITL CRYSTAL STRUCTURE OF THE REDUCED STATE OF THE JRNL TITL 2 THIOL-DISULFIDE REDUCTASE SDBA FROM STREPTOCOCCUS GORDONII JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.62 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2481: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.62 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.440 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 30503 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.247 REMARK 3 R VALUE (WORKING SET) : 0.238 REMARK 3 FREE R VALUE : 0.292 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1537 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 21.8660 - 3.6039 0.94 2795 126 0.1774 0.2727 REMARK 3 2 3.6039 - 2.8625 0.94 2663 161 0.1945 0.2550 REMARK 3 3 2.8625 - 2.5013 0.94 2619 174 0.2300 0.3061 REMARK 3 4 2.5013 - 2.2728 0.96 2719 119 0.2567 0.2853 REMARK 3 5 2.2728 - 2.1101 0.95 2649 125 0.2778 0.3095 REMARK 3 6 2.1101 - 1.9858 0.95 2654 123 0.2842 0.3229 REMARK 3 7 1.9858 - 1.8864 0.94 2596 139 0.2920 0.3426 REMARK 3 8 1.8864 - 1.8043 0.93 2571 168 0.3065 0.3520 REMARK 3 9 1.8043 - 1.7349 0.94 2571 126 0.3151 0.3369 REMARK 3 10 1.7349 - 1.6750 0.93 2591 130 0.3311 0.3099 REMARK 3 11 1.6750 - 1.6227 0.91 2519 125 0.3415 0.3336 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2452 REMARK 3 ANGLE : 0.560 3310 REMARK 3 CHIRALITY : 0.042 343 REMARK 3 PLANARITY : 0.004 428 REMARK 3 DIHEDRAL : 18.183 953 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 5:10) REMARK 3 ORIGIN FOR THE GROUP (A): -13.3607 -11.3994 -0.5534 REMARK 3 T TENSOR REMARK 3 T11: 0.0823 T22: 0.1538 REMARK 3 T33: 0.1702 T12: 0.0552 REMARK 3 T13: 0.0306 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 1.1167 L22: 0.7352 REMARK 3 L33: 0.7190 L12: -0.2077 REMARK 3 L13: -0.4142 L23: 0.3459 REMARK 3 S TENSOR REMARK 3 S11: -0.0064 S12: -0.1130 S13: 0.0622 REMARK 3 S21: -0.0002 S22: 0.0293 S23: -0.0819 REMARK 3 S31: -0.0304 S32: 0.0141 S33: -0.0337 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 11:23) REMARK 3 ORIGIN FOR THE GROUP (A): -12.3271 -9.3421 -20.0908 REMARK 3 T TENSOR REMARK 3 T11: 0.1286 T22: 0.2609 REMARK 3 T33: 0.1957 T12: 0.0131 REMARK 3 T13: 0.0149 T23: -0.0365 REMARK 3 L TENSOR REMARK 3 L11: 0.5174 L22: 3.0723 REMARK 3 L33: 4.9533 L12: 1.2507 REMARK 3 L13: -1.5197 L23: -3.5372 REMARK 3 S TENSOR REMARK 3 S11: -0.1367 S12: 0.1674 S13: -0.1812 REMARK 3 S21: -0.2103 S22: 0.0095 S23: 0.0382 REMARK 3 S31: 0.1114 S32: -0.2176 S33: 0.1119 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 24:98) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5149 -8.0770 -17.0036 REMARK 3 T TENSOR REMARK 3 T11: 0.0465 T22: 0.0112 REMARK 3 T33: 0.2233 T12: -0.0070 REMARK 3 T13: -0.0055 T23: 0.0325 REMARK 3 L TENSOR REMARK 3 L11: 0.0388 L22: 0.1515 REMARK 3 L33: 0.1060 L12: 0.0081 REMARK 3 L13: -0.0074 L23: -0.0207 REMARK 3 S TENSOR REMARK 3 S11: -0.0171 S12: 0.0270 S13: -0.0070 REMARK 3 S21: -0.0263 S22: -0.0171 S23: 0.0397 REMARK 3 S31: 0.0286 S32: -0.0058 S33: 0.0008 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 99:122) REMARK 3 ORIGIN FOR THE GROUP (A): -9.6030 -6.6753 -9.7990 REMARK 3 T TENSOR REMARK 3 T11: 0.0385 T22: 0.0350 REMARK 3 T33: 0.1445 T12: 0.0216 REMARK 3 T13: -0.0105 T23: 0.0265 REMARK 3 L TENSOR REMARK 3 L11: 0.1061 L22: 0.1334 REMARK 3 L33: 0.0692 L12: -0.0814 REMARK 3 L13: 0.0276 L23: -0.0315 REMARK 3 S TENSOR REMARK 3 S11: 0.0300 S12: 0.0140 S13: -0.0061 REMARK 3 S21: 0.0119 S22: 0.0367 S23: 0.0306 REMARK 3 S31: 0.0155 S32: -0.0163 S33: 0.0290 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 123:144) REMARK 3 ORIGIN FOR THE GROUP (A): 0.1271 -15.9266 -3.8890 REMARK 3 T TENSOR REMARK 3 T11: 0.0367 T22: 0.0951 REMARK 3 T33: 0.1829 T12: -0.0220 REMARK 3 T13: -0.0341 T23: 0.0312 REMARK 3 L TENSOR REMARK 3 L11: 0.8340 L22: 0.2297 REMARK 3 L33: 0.4086 L12: 0.3980 REMARK 3 L13: -0.1235 L23: 0.0658 REMARK 3 S TENSOR REMARK 3 S11: 0.0279 S12: 0.0184 S13: -0.1452 REMARK 3 S21: 0.0070 S22: -0.0642 S23: -0.0004 REMARK 3 S31: 0.0399 S32: -0.0791 S33: -0.0152 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 4:13) REMARK 3 ORIGIN FOR THE GROUP (A): -11.9674 -38.6019 -46.3902 REMARK 3 T TENSOR REMARK 3 T11: 0.0904 T22: 0.0227 REMARK 3 T33: 0.1142 T12: 0.0004 REMARK 3 T13: -0.0308 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 1.8559 L22: 1.5100 REMARK 3 L33: 1.7735 L12: 0.2093 REMARK 3 L13: 0.3589 L23: 1.3857 REMARK 3 S TENSOR REMARK 3 S11: -0.0517 S12: 0.1003 S13: 0.1469 REMARK 3 S21: -0.2511 S22: 0.0685 S23: -0.1596 REMARK 3 S31: -0.2375 S32: 0.0726 S33: -0.0052 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 14:62) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3790 -27.6590 -32.9168 REMARK 3 T TENSOR REMARK 3 T11: 0.0223 T22: 0.0459 REMARK 3 T33: 0.1470 T12: -0.0048 REMARK 3 T13: 0.0030 T23: 0.0138 REMARK 3 L TENSOR REMARK 3 L11: 0.2707 L22: 0.0720 REMARK 3 L33: 0.1830 L12: 0.0901 REMARK 3 L13: 0.0011 L23: -0.0814 REMARK 3 S TENSOR REMARK 3 S11: 0.0211 S12: 0.0431 S13: -0.0459 REMARK 3 S21: 0.0203 S22: -0.0154 S23: 0.0739 REMARK 3 S31: -0.0003 S32: 0.0181 S33: -0.0022 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 63:71) REMARK 3 ORIGIN FOR THE GROUP (A): -17.1130 -27.6432 -33.1910 REMARK 3 T TENSOR REMARK 3 T11: 0.2094 T22: 0.0902 REMARK 3 T33: 0.1974 T12: 0.0583 REMARK 3 T13: 0.0155 T23: -0.0633 REMARK 3 L TENSOR REMARK 3 L11: 0.1313 L22: 2.7747 REMARK 3 L33: 1.4877 L12: -0.2577 REMARK 3 L13: -0.1412 L23: 0.3663 REMARK 3 S TENSOR REMARK 3 S11: 0.0337 S12: 0.0171 S13: 0.0343 REMARK 3 S21: -0.0298 S22: -0.0548 S23: 0.2492 REMARK 3 S31: -0.1399 S32: -0.1481 S33: 0.0445 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 72:129) REMARK 3 ORIGIN FOR THE GROUP (A): -4.9561 -29.0001 -34.7302 REMARK 3 T TENSOR REMARK 3 T11: 0.0846 T22: 0.0502 REMARK 3 T33: 0.1477 T12: 0.0182 REMARK 3 T13: -0.0225 T23: -0.0189 REMARK 3 L TENSOR REMARK 3 L11: 0.0762 L22: 0.2957 REMARK 3 L33: 0.2513 L12: -0.1440 REMARK 3 L13: -0.0892 L23: 0.1120 REMARK 3 S TENSOR REMARK 3 S11: 0.0656 S12: 0.0389 S13: -0.1182 REMARK 3 S21: 0.0245 S22: -0.0216 S23: -0.1046 REMARK 3 S31: 0.1367 S32: 0.0421 S33: -0.0419 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN B AND RESID 130:145) REMARK 3 ORIGIN FOR THE GROUP (A): -16.0573 -21.0362 -45.3147 REMARK 3 T TENSOR REMARK 3 T11: 0.2021 T22: 0.1275 REMARK 3 T33: 0.2203 T12: -0.0222 REMARK 3 T13: -0.0132 T23: 0.0964 REMARK 3 L TENSOR REMARK 3 L11: 0.2348 L22: 1.7382 REMARK 3 L33: 1.2860 L12: 0.3348 REMARK 3 L13: -0.4229 L23: -0.1715 REMARK 3 S TENSOR REMARK 3 S11: -0.1208 S12: -0.0444 S13: -0.1394 REMARK 3 S21: 0.0402 S22: 0.0935 S23: 0.1601 REMARK 3 S31: 0.2680 S32: -0.1213 S33: -0.0070 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UM7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1000226117. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30533 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.620 REMARK 200 RESOLUTION RANGE LOW (A) : 28.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.62 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.10200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 10.20 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: 2F9S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.5 M AMMONIUM SULFATE, 0.1 M SODIUM REMARK 280 ACETATE PH 4.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 98.27000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 98.27000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 24.62500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 24.66000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 24.62500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 24.66000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 98.27000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 24.62500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 24.66000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 98.27000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 24.62500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 24.66000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 388 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 386 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -41 REMARK 465 LEU A -40 REMARK 465 LYS A -39 REMARK 465 GLU A -38 REMARK 465 LYS A -37 REMARK 465 TRP A -36 REMARK 465 TRP A -35 REMARK 465 LEU A -34 REMARK 465 PRO A -33 REMARK 465 PHE A -32 REMARK 465 LEU A -31 REMARK 465 THR A -30 REMARK 465 VAL A -29 REMARK 465 GLY A -28 REMARK 465 VAL A -27 REMARK 465 ILE A -26 REMARK 465 LEU A -25 REMARK 465 VAL A -24 REMARK 465 ALA A -23 REMARK 465 VAL A -22 REMARK 465 PHE A -21 REMARK 465 ALA A -20 REMARK 465 LEU A -19 REMARK 465 PHE A -18 REMARK 465 TYR A -17 REMARK 465 ILE A -16 REMARK 465 ALA A -15 REMARK 465 GLY A -14 REMARK 465 PRO A -13 REMARK 465 ASN A -12 REMARK 465 ARG A -11 REMARK 465 HIS A -10 REMARK 465 ASN A -9 REMARK 465 LYS A -8 REMARK 465 GLY A -7 REMARK 465 SER A -6 REMARK 465 THR A -5 REMARK 465 GLN A -4 REMARK 465 LYS A -3 REMARK 465 ASP A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 SER A 1 REMARK 465 ALA A 2 REMARK 465 VAL A 3 REMARK 465 GLU A 4 REMARK 465 ILE A 145 REMARK 465 MET B -41 REMARK 465 LEU B -40 REMARK 465 LYS B -39 REMARK 465 GLU B -38 REMARK 465 LYS B -37 REMARK 465 TRP B -36 REMARK 465 TRP B -35 REMARK 465 LEU B -34 REMARK 465 PRO B -33 REMARK 465 PHE B -32 REMARK 465 LEU B -31 REMARK 465 THR B -30 REMARK 465 VAL B -29 REMARK 465 GLY B -28 REMARK 465 VAL B -27 REMARK 465 ILE B -26 REMARK 465 LEU B -25 REMARK 465 VAL B -24 REMARK 465 ALA B -23 REMARK 465 VAL B -22 REMARK 465 PHE B -21 REMARK 465 ALA B -20 REMARK 465 LEU B -19 REMARK 465 PHE B -18 REMARK 465 TYR B -17 REMARK 465 ILE B -16 REMARK 465 ALA B -15 REMARK 465 GLY B -14 REMARK 465 PRO B -13 REMARK 465 ASN B -12 REMARK 465 ARG B -11 REMARK 465 HIS B -10 REMARK 465 ASN B -9 REMARK 465 LYS B -8 REMARK 465 GLY B -7 REMARK 465 SER B -6 REMARK 465 THR B -5 REMARK 465 GLN B -4 REMARK 465 LYS B -3 REMARK 465 ASP B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 SER B 1 REMARK 465 ALA B 2 REMARK 465 VAL B 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU B 16 O HOH B 201 2.12 REMARK 500 OG SER B 75 OE2 GLU B 102 2.13 REMARK 500 O HOH A 452 O HOH A 454 2.19 REMARK 500 O HOH A 364 O HOH A 439 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 19 -157.68 -88.45 REMARK 500 ASN A 32 -4.64 81.18 REMARK 500 LYS A 64 -59.99 -133.50 REMARK 500 HIS A 66 -162.05 57.15 REMARK 500 PHE A 67 85.03 63.01 REMARK 500 SER A 75 21.00 -143.29 REMARK 500 LYS A 76 -71.32 -105.15 REMARK 500 ASP A 91 78.27 52.46 REMARK 500 GLU B 29 46.74 -85.66 REMARK 500 ASN B 32 -53.19 66.66 REMARK 500 LYS B 64 -148.46 -80.92 REMARK 500 SER B 75 -148.77 -133.87 REMARK 500 PRO B 114 43.82 -94.00 REMARK 500 HIS B 133 100.99 -162.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 511 DISTANCE = 6.28 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP95518 RELATED DB: TARGETTRACK DBREF 5UM7 A -41 145 UNP A8AZP5 A8AZP5_STRGC 1 187 DBREF 5UM7 B -41 145 UNP A8AZP5 A8AZP5_STRGC 1 187 SEQRES 1 A 187 MET LEU LYS GLU LYS TRP TRP LEU PRO PHE LEU THR VAL SEQRES 2 A 187 GLY VAL ILE LEU VAL ALA VAL PHE ALA LEU PHE TYR ILE SEQRES 3 A 187 ALA GLY PRO ASN ARG HIS ASN LYS GLY SER THR GLN LYS SEQRES 4 A 187 ASP GLY SER SER ALA VAL GLU HIS GLU LEU THR GLY GLN SEQRES 5 A 187 GLN LEU PRO GLU PHE GLU MET VAL ASP GLN ALA GLY TYR SEQRES 6 A 187 GLN LYS LYS SER ALA GLU PHE TYR ASN LYS PRO MET LEU SEQRES 7 A 187 VAL VAL GLU TRP ALA SER TRP CYS PRO ASP CYS GLN LYS SEQRES 8 A 187 GLN LEU PRO GLU ILE GLN LYS VAL TYR GLU LYS TYR LYS SEQRES 9 A 187 GLY LYS ILE HIS PHE VAL MET LEU ASP MET LEU ASP SER SEQRES 10 A 187 LYS ARG GLU THR LYS GLU ARG ALA ASP GLN TYR ILE SER SEQRES 11 A 187 GLU LYS ASP TYR THR PHE PRO TYR TYR TYR ASP THR ASP SEQRES 12 A 187 GLU ARG ALA ALA ASP ILE LEU HIS VAL GLN SER ILE PRO SEQRES 13 A 187 THR ILE TYR LEU VAL ASP LYS ASN GLN LYS VAL LYS LYS SEQRES 14 A 187 VAL MET THR ASP PHE HIS ASP GLU ALA ALA LEU GLU LYS SEQRES 15 A 187 GLN LEU GLU GLU ILE SEQRES 1 B 187 MET LEU LYS GLU LYS TRP TRP LEU PRO PHE LEU THR VAL SEQRES 2 B 187 GLY VAL ILE LEU VAL ALA VAL PHE ALA LEU PHE TYR ILE SEQRES 3 B 187 ALA GLY PRO ASN ARG HIS ASN LYS GLY SER THR GLN LYS SEQRES 4 B 187 ASP GLY SER SER ALA VAL GLU HIS GLU LEU THR GLY GLN SEQRES 5 B 187 GLN LEU PRO GLU PHE GLU MET VAL ASP GLN ALA GLY TYR SEQRES 6 B 187 GLN LYS LYS SER ALA GLU PHE TYR ASN LYS PRO MET LEU SEQRES 7 B 187 VAL VAL GLU TRP ALA SER TRP CYS PRO ASP CYS GLN LYS SEQRES 8 B 187 GLN LEU PRO GLU ILE GLN LYS VAL TYR GLU LYS TYR LYS SEQRES 9 B 187 GLY LYS ILE HIS PHE VAL MET LEU ASP MET LEU ASP SER SEQRES 10 B 187 LYS ARG GLU THR LYS GLU ARG ALA ASP GLN TYR ILE SER SEQRES 11 B 187 GLU LYS ASP TYR THR PHE PRO TYR TYR TYR ASP THR ASP SEQRES 12 B 187 GLU ARG ALA ALA ASP ILE LEU HIS VAL GLN SER ILE PRO SEQRES 13 B 187 THR ILE TYR LEU VAL ASP LYS ASN GLN LYS VAL LYS LYS SEQRES 14 B 187 VAL MET THR ASP PHE HIS ASP GLU ALA ALA LEU GLU LYS SEQRES 15 B 187 GLN LEU GLU GLU ILE HET ACT A 201 4 HETNAM ACT ACETATE ION FORMUL 3 ACT C2 H3 O2 1- FORMUL 4 HOH *399(H2 O) HELIX 1 AA1 CYS A 44 LYS A 62 1 19 HELIX 2 AA2 THR A 79 LYS A 90 1 12 HELIX 3 AA3 ASP A 99 ASP A 101 5 3 HELIX 4 AA4 GLU A 102 HIS A 109 1 8 HELIX 5 AA5 ASP A 134 GLU A 144 1 11 HELIX 6 AA6 CYS B 44 LYS B 62 1 19 HELIX 7 AA7 THR B 79 ASP B 91 1 13 HELIX 8 AA8 GLU B 102 LEU B 108 1 7 HELIX 9 AA9 ASP B 134 GLU B 144 1 11 SHEET 1 AA1 5 GLN A 10 GLN A 11 0 SHEET 2 AA1 5 LYS A 124 MET A 129 -1 O VAL A 125 N GLN A 10 SHEET 3 AA1 5 THR A 115 VAL A 119 -1 N LEU A 118 O LYS A 127 SHEET 4 AA1 5 MET A 35 TRP A 40 -1 N VAL A 37 O TYR A 117 SHEET 5 AA1 5 VAL A 68 MET A 72 1 O MET A 69 N VAL A 38 SHEET 1 AA2 2 GLU A 16 VAL A 18 0 SHEET 2 AA2 2 GLN A 24 LYS A 26 -1 O LYS A 25 N MET A 17 SHEET 1 AA3 2 GLU B 16 VAL B 18 0 SHEET 2 AA3 2 GLN B 24 LYS B 26 -1 O LYS B 25 N MET B 17 SHEET 1 AA4 5 TYR B 96 ASP B 99 0 SHEET 2 AA4 5 PHE B 67 LEU B 73 1 N MET B 72 O TYR B 97 SHEET 3 AA4 5 MET B 35 TRP B 40 1 N LEU B 36 O MET B 69 SHEET 4 AA4 5 ILE B 116 VAL B 119 -1 O TYR B 117 N VAL B 37 SHEET 5 AA4 5 VAL B 125 MET B 129 -1 O MET B 129 N ILE B 116 CISPEP 1 ASP A 74 SER A 75 0 -2.41 CISPEP 2 ILE A 113 PRO A 114 0 0.00 SITE 1 AC1 7 HIS A 5 GLU A 6 LEU A 7 LEU A 108 SITE 2 AC1 7 HIS A 109 TYR A 117 HOH A 331 CRYST1 49.250 49.320 196.540 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020305 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020276 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005088 0.00000