HEADER DE NOVO PROTEIN 01-FEB-17 5UP5 TITLE SOLUTION STRUCTURE OF THE DE NOVO MINI PROTEIN EHEE_RD1_0284 COMPND MOL_ID: 1; COMPND 2 MOLECULE: EHEE_RD1_0284; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DE NOVO DESIGN, MINI PROTEIN, DE NOVO PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.HOULISTON,G.J.ROCKLIN,A.LEMAK,L.CARTER,T.M.CHIDYAUSIKU,D.BAKER, AUTHOR 2 C.H.ARROWSMITH REVDAT 3 14-JUN-23 5UP5 1 REMARK REVDAT 2 08-JAN-20 5UP5 1 REMARK REVDAT 1 26-JUL-17 5UP5 0 JRNL AUTH G.J.ROCKLIN,T.M.CHIDYAUSIKU,I.GORESHNIK,A.FORD,S.HOULISTON, JRNL AUTH 2 A.LEMAK,L.CARTER,R.RAVICHANDRAN,V.K.MULLIGAN,A.CHEVALIER, JRNL AUTH 3 C.H.ARROWSMITH,D.BAKER JRNL TITL GLOBAL ANALYSIS OF PROTEIN FOLDING USING MASSIVELY PARALLEL JRNL TITL 2 DESIGN, SYNTHESIS, AND TESTING. JRNL REF SCIENCE V. 357 168 2017 JRNL REFN ESSN 1095-9203 JRNL PMID 28706065 JRNL DOI 10.1126/SCIENCE.AAN0693 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER A. T. ET.AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UP5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1000226232. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 400 UM [U-13C; U-15N] PROTEIN, REMARK 210 150 MM UNLABELLED SODIUM REMARK 210 CHLORIDE, 50 MM UNLABELLED REMARK 210 SODIUM PHOSPHATE, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-13C REMARK 210 NOESY; 3D HNCO; 3D HNCA; 3D REMARK 210 CBCA(CO)NH; 3D HBHA(CO)NH; 2D 1H- REMARK 210 15N HSQC; 2D 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE II; AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, ABACUS, SPARKY REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (RES=RESIDUE NAME; REMARK 470 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 470 MODELS 1-20 REMARK 470 RES CSSEQI ATOMS REMARK 470 ASP A 40 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 10 15.10 80.02 REMARK 500 1 GLU A 22 -63.56 -141.50 REMARK 500 1 GLN A 30 65.46 -101.09 REMARK 500 1 ARG A 34 97.90 62.16 REMARK 500 1 TRP A 35 80.94 -67.87 REMARK 500 2 ASN A 8 20.91 -75.51 REMARK 500 2 ASN A 23 113.49 -161.30 REMARK 500 2 ASN A 32 94.69 -58.90 REMARK 500 3 GLU A 10 35.60 73.08 REMARK 500 3 GLN A 30 104.09 -54.11 REMARK 500 4 ASN A 8 37.80 -86.27 REMARK 500 4 GLU A 22 -87.84 -86.56 REMARK 500 4 GLU A 31 -70.52 -147.69 REMARK 500 4 ASN A 32 116.19 -173.82 REMARK 500 5 GLU A 9 37.37 -96.60 REMARK 500 6 ASP A 7 78.66 -115.10 REMARK 500 6 ASN A 8 -15.15 69.48 REMARK 500 6 GLU A 9 32.58 -89.70 REMARK 500 6 ASN A 23 31.90 70.16 REMARK 500 6 ARG A 25 54.10 -117.97 REMARK 500 6 GLN A 30 88.98 -68.13 REMARK 500 7 ASP A 7 -164.34 -118.60 REMARK 500 7 ASN A 23 77.09 61.66 REMARK 500 7 GLN A 30 84.24 64.56 REMARK 500 7 TRP A 35 84.00 -54.66 REMARK 500 8 GLU A 22 -85.32 -129.91 REMARK 500 9 ASP A 7 -164.70 -103.88 REMARK 500 9 GLU A 22 -69.89 -90.30 REMARK 500 10 ASP A 7 -169.12 -100.94 REMARK 500 10 ARG A 34 84.86 51.37 REMARK 500 11 GLU A 9 24.72 -73.90 REMARK 500 11 GLU A 10 30.39 70.16 REMARK 500 12 ASN A 23 -155.06 -104.66 REMARK 500 12 ASN A 32 19.21 54.37 REMARK 500 12 VAL A 37 94.22 -68.80 REMARK 500 13 ASN A 8 -16.82 77.20 REMARK 500 14 GLU A 10 70.94 69.22 REMARK 500 14 ASN A 32 96.70 -62.19 REMARK 500 15 ASP A 7 -143.72 -167.59 REMARK 500 15 GLU A 22 -49.24 75.79 REMARK 500 15 GLU A 31 14.75 59.97 REMARK 500 16 THR A 3 93.84 -69.22 REMARK 500 16 ASP A 7 -7.47 -140.76 REMARK 500 16 GLU A 10 70.63 64.76 REMARK 500 16 GLU A 22 -78.67 -107.32 REMARK 500 16 ARG A 24 56.16 -97.18 REMARK 500 16 GLN A 30 31.48 -91.92 REMARK 500 17 GLU A 9 37.68 -96.86 REMARK 500 17 GLU A 22 -36.74 -133.81 REMARK 500 17 GLU A 31 113.29 -168.14 REMARK 500 REMARK 500 THIS ENTRY HAS 59 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30242 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF THE DE NOVO MINI PROTEIN EHEE_RD1_0284 REMARK 900 RELATED ID: 5UOI RELATED DB: PDB REMARK 900 RELATED ID: 5UP1 RELATED DB: PDB DBREF 5UP5 A 1 40 PDB 5UP5 5UP5 1 40 SEQRES 1 A 40 THR GLN THR GLN GLU PHE ASP ASN GLU GLU GLU ALA ARG SEQRES 2 A 40 LYS ALA GLU LYS GLU LEU ARG LYS GLU ASN ARG ARG VAL SEQRES 3 A 40 THR VAL THR GLN GLU ASN GLY ARG TRP ARG VAL THR TRP SEQRES 4 A 40 ASP HELIX 1 AA1 GLU A 10 ARG A 20 1 11 SHEET 1 AA1 3 GLN A 2 GLU A 5 0 SHEET 2 AA1 3 ARG A 36 TRP A 39 -1 O VAL A 37 N GLN A 4 SHEET 3 AA1 3 VAL A 26 THR A 29 -1 N THR A 27 O THR A 38 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1