HEADER HYDROLASE 06-FEB-17 5UQ6 TITLE PIG PURPLE ACID PHOSPHATASE COMPLEXED WITH PHOSPHATE IN TWO TITLE 2 COORDINATION MODES ALONG WITH A BRIDGING HYDROXIDE ION COMPND MOL_ID: 1; COMPND 2 MOLECULE: TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TR-AP,TARTRATE-RESISTANT ACID ATPASE,TRATPASE,TYPE 5 ACID COMPND 5 PHOSPHATASE,UTEROFERRIN,UF; COMPND 6 EC: 3.1.3.2 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 3 ORGANISM_COMMON: PIG; SOURCE 4 ORGANISM_TAXID: 9823 KEYWDS TRANSITION STATE, METALLOHYDROLASE, HYDROXIDE., HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.SELLECK,L.GUDDAT,G.SCHENK,D.CLAYTON REVDAT 5 30-OCT-24 5UQ6 1 REMARK REVDAT 4 04-OCT-23 5UQ6 1 HETSYN REVDAT 3 29-JUL-20 5UQ6 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE REVDAT 2 27-SEP-17 5UQ6 1 REMARK REVDAT 1 24-MAY-17 5UQ6 0 JRNL AUTH C.SELLECK,D.CLAYTON,L.R.GAHAN,N.MITIC,R.P.MCGEARY, JRNL AUTH 2 M.M.PEDROSO,L.W.GUDDAT,G.SCHENK JRNL TITL VISUALIZATION OF THE REACTION TRAJECTORY AND TRANSITION JRNL TITL 2 STATE IN A HYDROLYTIC REACTION CATALYZED BY A METALLOENZYME. JRNL REF CHEMISTRY V. 23 4778 2017 JRNL REFN ISSN 1521-3765 JRNL PMID 28261912 JRNL DOI 10.1002/CHEM.201700866 REMARK 2 REMARK 2 RESOLUTION. 1.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.4 REMARK 3 NUMBER OF REFLECTIONS : 98542 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.142 REMARK 3 R VALUE (WORKING SET) : 0.141 REMARK 3 FREE R VALUE : 0.156 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1983 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.6136 - 2.8489 0.77 6146 123 0.1330 0.1437 REMARK 3 2 2.8489 - 2.2615 0.90 6948 137 0.1206 0.1266 REMARK 3 3 2.2615 - 1.9757 0.91 7028 148 0.1148 0.1360 REMARK 3 4 1.9757 - 1.7950 0.92 7067 144 0.1188 0.1304 REMARK 3 5 1.7950 - 1.6664 0.93 7116 153 0.1211 0.1355 REMARK 3 6 1.6664 - 1.5681 0.94 7111 149 0.1253 0.1463 REMARK 3 7 1.5681 - 1.4896 0.94 7125 144 0.1414 0.1688 REMARK 3 8 1.4896 - 1.4248 0.94 7132 150 0.1557 0.1813 REMARK 3 9 1.4248 - 1.3699 0.94 7107 144 0.1801 0.1944 REMARK 3 10 1.3699 - 1.3227 0.94 7112 141 0.1999 0.2108 REMARK 3 11 1.3227 - 1.2813 0.94 7115 140 0.2182 0.2220 REMARK 3 12 1.2813 - 1.2447 0.93 7043 139 0.2348 0.2849 REMARK 3 13 1.2447 - 1.2119 0.92 6926 142 0.2457 0.2571 REMARK 3 14 1.2119 - 1.1823 0.74 5583 129 0.2633 0.2551 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2562 REMARK 3 ANGLE : 0.980 3500 REMARK 3 CHIRALITY : 0.081 381 REMARK 3 PLANARITY : 0.008 451 REMARK 3 DIHEDRAL : 11.564 946 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.2169 3.7662 14.7818 REMARK 3 T TENSOR REMARK 3 T11: 0.0671 T22: 0.0863 REMARK 3 T33: 0.0849 T12: 0.0016 REMARK 3 T13: 0.0150 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.8124 L22: 1.8443 REMARK 3 L33: 1.1655 L12: -0.1919 REMARK 3 L13: -0.0960 L23: 0.2545 REMARK 3 S TENSOR REMARK 3 S11: 0.0025 S12: 0.0529 S13: 0.0766 REMARK 3 S21: -0.1196 S22: 0.0128 S23: -0.1717 REMARK 3 S31: 0.0093 S32: 0.0845 S33: 0.0070 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 91 THROUGH 147 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7642 9.2477 27.1109 REMARK 3 T TENSOR REMARK 3 T11: 0.0871 T22: 0.1035 REMARK 3 T33: 0.0989 T12: -0.0001 REMARK 3 T13: -0.0149 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 1.3066 L22: 1.0006 REMARK 3 L33: 1.3259 L12: -0.1076 REMARK 3 L13: -0.3365 L23: 0.0308 REMARK 3 S TENSOR REMARK 3 S11: -0.0084 S12: -0.0304 S13: 0.1438 REMARK 3 S21: 0.0374 S22: 0.0477 S23: -0.1132 REMARK 3 S31: -0.0268 S32: 0.1396 S33: -0.0155 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 148 THROUGH 175 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0881 7.9627 37.2738 REMARK 3 T TENSOR REMARK 3 T11: 0.0808 T22: 0.1107 REMARK 3 T33: 0.0638 T12: 0.0289 REMARK 3 T13: 0.0022 T23: -0.0111 REMARK 3 L TENSOR REMARK 3 L11: 2.3763 L22: 5.9808 REMARK 3 L33: 2.4704 L12: 1.7343 REMARK 3 L13: 0.1229 L23: 0.4568 REMARK 3 S TENSOR REMARK 3 S11: -0.0437 S12: -0.0890 S13: 0.0484 REMARK 3 S21: 0.0825 S22: 0.0431 S23: 0.1680 REMARK 3 S31: -0.0053 S32: -0.1179 S33: 0.0182 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 176 THROUGH 271 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.8121 13.2735 21.3370 REMARK 3 T TENSOR REMARK 3 T11: 0.0829 T22: 0.0997 REMARK 3 T33: 0.0894 T12: 0.0129 REMARK 3 T13: 0.0020 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 1.0457 L22: 1.4143 REMARK 3 L33: 1.2768 L12: -0.3609 REMARK 3 L13: -0.2222 L23: 0.2106 REMARK 3 S TENSOR REMARK 3 S11: 0.0189 S12: 0.0342 S13: 0.0643 REMARK 3 S21: -0.0014 S22: -0.0173 S23: 0.0395 REMARK 3 S31: -0.0768 S32: -0.1419 S33: 0.0142 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 272 THROUGH 304 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.6366 21.3177 12.5386 REMARK 3 T TENSOR REMARK 3 T11: 0.1126 T22: 0.0882 REMARK 3 T33: 0.1351 T12: 0.0208 REMARK 3 T13: 0.0148 T23: 0.0423 REMARK 3 L TENSOR REMARK 3 L11: 2.5199 L22: 5.0141 REMARK 3 L33: 2.7715 L12: 0.3860 REMARK 3 L13: 0.6800 L23: 1.6289 REMARK 3 S TENSOR REMARK 3 S11: 0.0040 S12: 0.0749 S13: 0.3332 REMARK 3 S21: -0.0971 S22: -0.0500 S23: -0.1526 REMARK 3 S31: -0.2500 S32: -0.0122 S33: 0.0644 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UQ6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1000226234. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 98587 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.180 REMARK 200 RESOLUTION RANGE LOW (A) : 30.603 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 200 DATA REDUNDANCY : 3.957 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1UTE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% (W/V) PEG3350, 0.1 M LICL, 5% REMARK 280 (V/V)ISOPROPANOL, 0.1 M SODIUM CITRATE PH 5.0. PROTEIN REMARK 280 CONCENTRATION 38 MG/ML. PROTEIN CONCENTRATION 60MG/ML., VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.56200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.52600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.99050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.52600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.56200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.99050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 1 REMARK 465 ALA A 2 REMARK 465 PRO A 3 REMARK 465 ARG A 305 REMARK 465 SER A 306 REMARK 465 GLU A 307 REMARK 465 HIS A 308 REMARK 465 GLN A 309 REMARK 465 HIS A 310 REMARK 465 ARG A 311 REMARK 465 ARG A 312 REMARK 465 ALA A 313 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH22 ARG A 81 O HOH A 505 1.42 REMARK 500 O ARG A 81 O HOH A 502 1.99 REMARK 500 N THR A 4 O HOH A 503 2.09 REMARK 500 O HOH A 547 O HOH A 876 2.12 REMARK 500 O HOH A 557 O HOH A 841 2.12 REMARK 500 NZ LYS A 170 O HOH A 504 2.12 REMARK 500 O HOH A 703 O HOH A 761 2.17 REMARK 500 O HOH A 928 O HOH A 938 2.18 REMARK 500 O HOH A 590 O HOH A 784 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 735 O HOH A 774 3545 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 52 60.92 60.57 REMARK 500 PHE A 71 -72.28 -109.48 REMARK 500 ASN A 82 -2.17 76.66 REMARK 500 PHE A 113 81.05 -154.45 REMARK 500 ALA A 193 -143.08 -99.91 REMARK 500 HIS A 221 -49.74 76.07 REMARK 500 ASN A 243 -25.36 -141.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 942 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A 943 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH A 944 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH A 945 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH A 946 DISTANCE = 6.74 ANGSTROMS REMARK 525 HOH A 947 DISTANCE = 6.87 ANGSTROMS REMARK 525 HOH A 948 DISTANCE = 7.08 ANGSTROMS REMARK 525 HOH A 949 DISTANCE = 7.47 ANGSTROMS REMARK 525 HOH A 950 DISTANCE = 10.23 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 402 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 14 OD2 REMARK 620 2 ASP A 52 OD2 89.0 REMARK 620 3 TYR A 55 OH 100.8 98.4 REMARK 620 4 HIS A 223 NE2 95.4 164.6 95.3 REMARK 620 5 PO4 A 404 O1 155.3 84.2 103.7 85.7 REMARK 620 6 OH A 406 O 79.8 75.1 173.5 91.1 75.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 403 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 52 OD2 REMARK 620 2 ASN A 91 OD1 105.3 REMARK 620 3 HIS A 186 NE2 85.9 86.6 REMARK 620 4 HIS A 221 ND1 164.1 89.3 88.8 REMARK 620 5 PO4 A 404 O4 92.3 89.2 174.8 94.2 REMARK 620 6 PO4 A 404 O4 91.1 86.5 171.5 96.2 3.3 REMARK 620 7 OH A 406 O 77.9 166.0 107.3 89.4 77.1 79.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 405 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 77 OD1 REMARK 620 2 ASP A 77 OD2 43.0 REMARK 620 3 HOH A 795 O 110.2 77.2 REMARK 620 N 1 2 DBREF 5UQ6 A 1 313 UNP P09889 PPA5_PIG 28 340 SEQRES 1 A 313 THR ALA PRO THR PRO ILE LEU ARG PHE VAL ALA VAL GLY SEQRES 2 A 313 ASP TRP GLY GLY VAL PRO ASN ALA PRO PHE HIS THR ALA SEQRES 3 A 313 ARG GLU MET ALA ASN ALA LYS ALA ILE ALA THR THR VAL SEQRES 4 A 313 LYS THR LEU GLY ALA ASP PHE ILE LEU SER LEU GLY ASP SEQRES 5 A 313 ASN PHE TYR PHE THR GLY VAL HIS ASP ALA LYS ASP LYS SEQRES 6 A 313 ARG PHE GLN GLU THR PHE GLU ASP VAL PHE SER ASP PRO SEQRES 7 A 313 SER LEU ARG ASN VAL PRO TRP HIS VAL LEU ALA GLY ASN SEQRES 8 A 313 HIS ASP HIS LEU GLY ASN VAL SER ALA GLN ILE ALA TYR SEQRES 9 A 313 SER LYS ILE SER LYS ARG TRP ASN PHE PRO SER PRO TYR SEQRES 10 A 313 TYR ARG LEU ARG PHE LYS ILE PRO ARG SER ASN VAL SER SEQRES 11 A 313 VAL ALA ILE PHE MET LEU ASP THR VAL THR LEU CYS GLY SEQRES 12 A 313 ASN SER ASP ASP PHE VAL SER GLN GLN PRO GLU ARG PRO SEQRES 13 A 313 ARG ASN LEU ALA LEU ALA ARG THR GLN LEU ALA TRP ILE SEQRES 14 A 313 LYS LYS GLN LEU ALA ALA ALA LYS GLU ASP TYR VAL LEU SEQRES 15 A 313 VAL ALA GLY HIS TYR PRO VAL TRP SER ILE ALA GLU HIS SEQRES 16 A 313 GLY PRO THR HIS CYS LEU VAL LYS GLN LEU LEU PRO LEU SEQRES 17 A 313 LEU THR THR HIS LYS VAL THR ALA TYR LEU CYS GLY HIS SEQRES 18 A 313 ASP HIS ASN LEU GLN TYR LEU GLN ASP GLU ASN GLY LEU SEQRES 19 A 313 GLY PHE VAL LEU SER GLY ALA GLY ASN PHE MET ASP PRO SEQRES 20 A 313 SER LYS LYS HIS LEU ARG LYS VAL PRO ASN GLY TYR LEU SEQRES 21 A 313 ARG PHE HIS PHE GLY ALA GLU ASN SER LEU GLY GLY PHE SEQRES 22 A 313 ALA TYR VAL GLU ILE THR PRO LYS GLU MET SER VAL THR SEQRES 23 A 313 TYR ILE GLU ALA SER GLY LYS SER LEU PHE LYS THR LYS SEQRES 24 A 313 LEU PRO ARG ARG ALA ARG SER GLU HIS GLN HIS ARG ARG SEQRES 25 A 313 ALA HET NAG A 401 28 HET FE A 402 1 HET FE A 403 1 HET PO4 A 404 10 HET NA A 405 1 HET OH A 406 2 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FE FE (III) ION HETNAM PO4 PHOSPHATE ION HETNAM NA SODIUM ION HETNAM OH HYDROXIDE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NAG C8 H15 N O6 FORMUL 3 FE 2(FE 3+) FORMUL 5 PO4 O4 P 3- FORMUL 6 NA NA 1+ FORMUL 7 OH H O 1- FORMUL 8 HOH *450(H2 O) HELIX 1 AA1 THR A 25 GLY A 43 1 19 HELIX 2 AA2 LYS A 65 PHE A 71 1 7 HELIX 3 AA3 ASP A 77 ARG A 81 5 5 HELIX 4 AA4 GLY A 90 LEU A 95 1 6 HELIX 5 AA5 ASN A 97 TYR A 104 1 8 HELIX 6 AA6 SER A 105 ILE A 107 5 3 HELIX 7 AA7 ASP A 137 GLY A 143 1 7 HELIX 8 AA8 ASN A 144 PHE A 148 5 5 HELIX 9 AA9 ASN A 158 ALA A 176 1 19 HELIX 10 AB1 THR A 198 LEU A 205 1 8 HELIX 11 AB2 LEU A 205 HIS A 212 1 8 HELIX 12 AB3 HIS A 251 VAL A 255 5 5 SHEET 1 AA1 7 TRP A 111 ASN A 112 0 SHEET 2 AA1 7 TRP A 85 VAL A 87 1 N VAL A 87 O ASN A 112 SHEET 3 AA1 7 PHE A 46 SER A 49 1 N ILE A 47 O HIS A 86 SHEET 4 AA1 7 LEU A 7 VAL A 12 1 N VAL A 10 O LEU A 48 SHEET 5 AA1 7 GLY A 272 ILE A 278 -1 O VAL A 276 N PHE A 9 SHEET 6 AA1 7 MET A 283 GLU A 289 -1 O SER A 284 N GLU A 277 SHEET 7 AA1 7 SER A 294 LEU A 300 -1 O LEU A 295 N TYR A 287 SHEET 1 AA2 7 TYR A 118 LYS A 123 0 SHEET 2 AA2 7 SER A 130 MET A 135 -1 O ILE A 133 N LEU A 120 SHEET 3 AA2 7 TYR A 180 ALA A 184 1 O ALA A 184 N PHE A 134 SHEET 4 AA2 7 ALA A 216 CYS A 219 1 O LEU A 218 N VAL A 183 SHEET 5 AA2 7 GLY A 235 SER A 239 1 O SER A 239 N CYS A 219 SHEET 6 AA2 7 LEU A 225 GLN A 229 -1 N GLN A 226 O LEU A 238 SHEET 7 AA2 7 LEU A 260 PHE A 264 -1 O ARG A 261 N TYR A 227 SSBOND 1 CYS A 142 CYS A 200 1555 1555 2.11 LINK ND2 ASN A 97 C1 NAG A 401 1555 1555 1.43 LINK OD2 ASP A 14 FE FE A 402 1555 1555 2.05 LINK OD2 ASP A 52 FE FE A 402 1555 1555 2.32 LINK OD2 ASP A 52 FE FE A 403 1555 1555 2.22 LINK OH TYR A 55 FE FE A 402 1555 1555 1.89 LINK OD1BASP A 77 NA NA A 405 1555 1555 1.94 LINK OD2BASP A 77 NA NA A 405 1555 1555 3.18 LINK OD1 ASN A 91 FE FE A 403 1555 1555 2.13 LINK NE2 HIS A 186 FE FE A 403 1555 1555 2.19 LINK ND1 HIS A 221 FE FE A 403 1555 1555 2.25 LINK NE2 HIS A 223 FE FE A 402 1555 1555 2.19 LINK FE FE A 402 O1 APO4 A 404 1555 1555 2.19 LINK FE FE A 402 O OH A 406 1555 1555 2.10 LINK FE FE A 403 O4 APO4 A 404 1555 1555 2.09 LINK FE FE A 403 O4 BPO4 A 404 1555 1555 2.33 LINK FE FE A 403 O OH A 406 1555 1555 2.06 LINK NA NA A 405 O HOH A 795 1555 1555 2.68 CISPEP 1 ALA A 21 PRO A 22 0 8.17 CISPEP 2 TYR A 55 PHE A 56 0 -5.67 CRYST1 63.124 69.981 75.052 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015842 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014290 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013324 0.00000