HEADER HYDROLASE/HYDROLASE INHIBITOR 09-FEB-17 5UR3 TITLE KAPOSI'S SARCOMA HERPESVIRUS PROTEASE IN COMPLEX WITH ALLOSTERIC TITLE 2 INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: KSHV PROTEASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 23-215; COMPND 5 SYNONYM: ORF17, ORF 17; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN HERPESVIRUS 8; SOURCE 3 ORGANISM_COMMON: HHV-8; SOURCE 4 ORGANISM_TAXID: 37296; SOURCE 5 GENE: ORF17; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SERINE HYDROLASE, VIRAL PROTEIN, CAPSID MATURATION, HYDROLASE- KEYWDS 2 HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR T.M.ACKER,J.GABLE,M.-F.BOHN,C.S.CRAIK REVDAT 4 06-MAR-24 5UR3 1 REMARK REVDAT 3 01-JAN-20 5UR3 1 REMARK REVDAT 2 27-SEP-17 5UR3 1 REMARK REVDAT 1 08-MAR-17 5UR3 0 JRNL AUTH T.M.ACKER,C.S.CRAIK,M.-F.BOHN JRNL TITL KAPOSI'S SARCOMA HERPESVIRUS PROTEASE IN COMPLEX WITH JRNL TITL 2 ALLOSTERIC INHIBITOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10PRE_2100 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 34879 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1761 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 58.6693 - 4.2320 1.00 2704 147 0.1732 0.2106 REMARK 3 2 4.2320 - 3.3591 1.00 2613 124 0.1547 0.1800 REMARK 3 3 3.3591 - 2.9345 1.00 2538 146 0.1756 0.2019 REMARK 3 4 2.9345 - 2.6662 1.00 2559 142 0.1880 0.2452 REMARK 3 5 2.6662 - 2.4751 1.00 2568 129 0.1851 0.2505 REMARK 3 6 2.4751 - 2.3292 1.00 2533 139 0.1868 0.2476 REMARK 3 7 2.3292 - 2.2125 1.00 2548 111 0.1811 0.2616 REMARK 3 8 2.2125 - 2.1162 1.00 2496 154 0.1783 0.2272 REMARK 3 9 2.1162 - 2.0347 1.00 2526 138 0.1823 0.2204 REMARK 3 10 2.0347 - 1.9645 1.00 2510 132 0.1968 0.2439 REMARK 3 11 1.9645 - 1.9031 1.00 2543 123 0.2060 0.2435 REMARK 3 12 1.9031 - 1.8487 0.99 2480 151 0.2238 0.2582 REMARK 3 13 1.8487 - 1.8000 1.00 2500 125 0.2401 0.2870 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 3196 REMARK 3 ANGLE : 1.339 4394 REMARK 3 CHIRALITY : 0.076 501 REMARK 3 PLANARITY : 0.010 568 REMARK 3 DIHEDRAL : 17.155 1883 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UR3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1000226300. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37258 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 59.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX PHENIX 1.8.4 PHASER 2.1 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.3M IMIDAZOLE PH 8.0, 0.4M REMARK 280 NAH2PO4/1.6M K2HPO4, 0.2M NACL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 33.70000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 46.43000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 59.46500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 33.70000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.43000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 59.46500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 33.70000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 46.43000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 59.46500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 33.70000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 46.43000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 59.46500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 363 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 403 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 18 REMARK 465 THR A 195 REMARK 465 LEU A 196 REMARK 465 SER B 124 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 19 CG CD1 CD2 REMARK 470 ARG A 121 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 125 CG CD OE1 NE2 REMARK 470 ARG A 180 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 95 CG CD CE NZ REMARK 470 ASN B 96 CG OD1 ND2 REMARK 470 LEU B 97 CG CD1 CD2 REMARK 470 ARG B 121 CG CD NE CZ NH1 NH2 REMARK 470 THR B 126 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE ARG A 143 O HOH A 302 1.30 REMARK 500 HH12 ARG A 169 O HOH A 301 1.54 REMARK 500 O HIS B 63 O HOH B 301 1.92 REMARK 500 NH1 ARG A 169 O HOH A 301 1.95 REMARK 500 NE ARG A 143 O HOH A 302 2.06 REMARK 500 OD2 ASP B 12 O HOH B 302 2.16 REMARK 500 NE2 GLN B 125 O HOH B 303 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 303 O HOH B 369 4555 1.88 REMARK 500 O HOH A 365 O HOH B 395 6444 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 85 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG A 143 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 125 -109.16 -93.54 REMARK 500 THR A 146 158.33 77.10 REMARK 500 LEU A 193 24.61 -77.81 REMARK 500 SER B 62 -124.26 48.79 REMARK 500 ASN B 96 -140.03 -103.88 REMARK 500 LEU B 97 50.41 76.45 REMARK 500 SER B 128 -18.47 70.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL A 11 ASP A 12 149.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8OY A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8OY B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8OY B 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4P3H RELATED DB: PDB REMARK 900 4P3H CONTAINS THE SAME PROTEIN COMPLEXED WITH A DIFFERENT INHIBITOR. REMARK 900 RELATED ID: 3NJQ RELATED DB: PDB REMARK 900 3NJQ CONTAINS THE SAME PROTEIN COMPLEXED WITH A DIFFERENT INHIBITOR. REMARK 900 RELATED ID: 4P2T RELATED DB: PDB REMARK 900 4P2T CONTAINS THE SAME PROTEIN COMPLEXED WITH A DIFFERENT INHIBITOR. DBREF 5UR3 A 4 196 UNP O40922 O40922_HHV8 23 215 DBREF 5UR3 B 4 196 UNP O40922 O40922_HHV8 23 215 SEQRES 1 A 193 GLY LEU TYR VAL GLY GLY PHE VAL ASP VAL VAL SER CYS SEQRES 2 A 193 PRO LYS LEU GLU GLN GLU LEU TYR LEU ASP PRO ASP GLN SEQRES 3 A 193 VAL THR ASP TYR LEU PRO VAL THR GLU PRO LEU PRO ILE SEQRES 4 A 193 THR ILE GLU HIS LEU PRO GLU THR GLU VAL GLY TRP THR SEQRES 5 A 193 LEU GLY LEU PHE GLN VAL SER HIS GLY ILE PHE CYS THR SEQRES 6 A 193 GLY ALA ILE THR SER PRO ALA PHE LEU GLU LEU ALA SER SEQRES 7 A 193 ARG LEU ALA ASP THR SER HIS VAL ALA ARG ALA PRO VAL SEQRES 8 A 193 LYS ASN LEU PRO LYS GLU PRO LEU LEU GLU ILE LEU HIS SEQRES 9 A 193 THR TRP LEU PRO GLY LEU SER LEU SER SER ILE HIS PRO SEQRES 10 A 193 ARG GLU LEU SER GLN THR PRO SER GLY PRO VAL PHE GLN SEQRES 11 A 193 HIS VAL SER LEU CYS ALA LEU GLY ARG ARG ARG GLY THR SEQRES 12 A 193 VAL ALA VAL TYR GLY HIS ASP ALA GLU TRP VAL VAL SER SEQRES 13 A 193 ARG PHE SER SER VAL SER LYS SER GLU ARG ALA HIS ILE SEQRES 14 A 193 LEU GLN HIS VAL SER SER CYS ARG LEU GLU ASP LEU SER SEQRES 15 A 193 THR PRO ASN PHE VAL SER PRO LEU GLU THR LEU SEQRES 1 B 193 GLY LEU TYR VAL GLY GLY PHE VAL ASP VAL VAL SER CYS SEQRES 2 B 193 PRO LYS LEU GLU GLN GLU LEU TYR LEU ASP PRO ASP GLN SEQRES 3 B 193 VAL THR ASP TYR LEU PRO VAL THR GLU PRO LEU PRO ILE SEQRES 4 B 193 THR ILE GLU HIS LEU PRO GLU THR GLU VAL GLY TRP THR SEQRES 5 B 193 LEU GLY LEU PHE GLN VAL SER HIS GLY ILE PHE CYS THR SEQRES 6 B 193 GLY ALA ILE THR SER PRO ALA PHE LEU GLU LEU ALA SER SEQRES 7 B 193 ARG LEU ALA ASP THR SER HIS VAL ALA ARG ALA PRO VAL SEQRES 8 B 193 LYS ASN LEU PRO LYS GLU PRO LEU LEU GLU ILE LEU HIS SEQRES 9 B 193 THR TRP LEU PRO GLY LEU SER LEU SER SER ILE HIS PRO SEQRES 10 B 193 ARG GLU LEU SER GLN THR PRO SER GLY PRO VAL PHE GLN SEQRES 11 B 193 HIS VAL SER LEU CYS ALA LEU GLY ARG ARG ARG GLY THR SEQRES 12 B 193 VAL ALA VAL TYR GLY HIS ASP ALA GLU TRP VAL VAL SER SEQRES 13 B 193 ARG PHE SER SER VAL SER LYS SER GLU ARG ALA HIS ILE SEQRES 14 B 193 LEU GLN HIS VAL SER SER CYS ARG LEU GLU ASP LEU SER SEQRES 15 B 193 THR PRO ASN PHE VAL SER PRO LEU GLU THR LEU HET 8OY A 201 58 HET 8OY B 201 58 HET 8OY B 202 58 HETNAM 8OY 4-{[6-(CYCLOHEXYLMETHYL)PYRIDINE-2-CARBONYL]AMINO}-3- HETNAM 2 8OY (PHENYLAMINO)BENZOIC ACID FORMUL 3 8OY 3(C26 H27 N3 O3) FORMUL 6 HOH *224(H2 O) HELIX 1 AA1 ASP A 26 LEU A 34 5 9 HELIX 2 AA2 SER A 73 SER A 87 1 15 HELIX 3 AA3 SER A 87 ALA A 92 1 6 HELIX 4 AA4 GLU A 100 LEU A 110 1 11 HELIX 5 AA5 HIS A 119 SER A 124 1 6 HELIX 6 AA6 ASP A 153 ARG A 160 1 8 HELIX 7 AA7 SER A 165 SER A 178 1 14 HELIX 8 AA8 ASP B 26 LEU B 34 5 9 HELIX 9 AA9 SER B 73 SER B 87 1 15 HELIX 10 AB1 SER B 87 ALA B 92 1 6 HELIX 11 AB2 GLU B 100 LEU B 110 1 11 HELIX 12 AB3 HIS B 119 LEU B 123 5 5 HELIX 13 AB4 ASP B 153 SER B 159 1 7 HELIX 14 AB5 SER B 165 SER B 178 1 14 HELIX 15 AB6 ARG B 180 LEU B 184 5 5 SHEET 1 AA1 9 TYR A 24 LEU A 25 0 SHEET 2 AA1 9 VAL A 149 GLY A 151 0 SHEET 3 AA1 9 GLY A 64 ILE A 71 0 SHEET 4 AA1 9 GLY A 53 VAL A 61 -1 N LEU A 56 O THR A 68 SHEET 5 AA1 9 PRO A 41 ILE A 44 -1 N ILE A 42 O GLY A 53 SHEET 6 AA1 9 PHE A 132 CYS A 138 1 O LEU A 137 N THR A 43 SHEET 7 AA1 9 GLY A 112 SER A 117 -1 N SER A 114 O SER A 136 SHEET 8 AA1 9 LEU A 5 VAL A 14 1 N ASP A 12 O LEU A 115 SHEET 9 AA1 9 VAL A 149 GLY A 151 -1 O GLY A 151 N TYR A 6 SHEET 1 AA2 9 LEU B 23 LEU B 25 0 SHEET 2 AA2 9 ASP B 12 SER B 15 -1 N SER B 15 O LEU B 23 SHEET 3 AA2 9 GLY B 112 SER B 117 1 O LEU B 115 N ASP B 12 SHEET 4 AA2 9 PHE B 132 CYS B 138 -1 O SER B 136 N SER B 114 SHEET 5 AA2 9 PRO B 41 ILE B 44 1 N THR B 43 O LEU B 137 SHEET 6 AA2 9 GLU B 51 VAL B 61 -1 O VAL B 52 N ILE B 42 SHEET 7 AA2 9 GLY B 64 ILE B 71 -1 O THR B 68 N LEU B 56 SHEET 8 AA2 9 LEU B 5 PHE B 10 -1 N LEU B 5 O ILE B 71 SHEET 9 AA2 9 VAL B 149 GLY B 151 -1 O GLY B 151 N TYR B 6 CISPEP 1 LEU A 34 PRO A 35 0 4.33 CISPEP 2 LEU B 34 PRO B 35 0 1.49 CISPEP 3 ASN B 96 LEU B 97 0 -10.53 SITE 1 AC1 8 LEU A 79 TRP A 109 PRO A 192 HOH A 319 SITE 2 AC1 8 LEU B 47 PRO B 192 8OY B 201 8OY B 202 SITE 1 AC2 10 ARG A 82 LEU A 83 SER A 87 TRP A 109 SITE 2 AC2 10 LEU A 193 8OY A 201 ILE B 44 LEU B 140 SITE 3 AC2 10 ARG B 144 HOH B 344 SITE 1 AC3 14 TRP A 109 8OY A 201 ILE B 44 LEU B 79 SITE 2 AC3 14 LEU B 83 ALA B 90 TRP B 109 SER B 191 SITE 3 AC3 14 PRO B 192 LEU B 193 GLU B 194 THR B 195 SITE 4 AC3 14 HOH B 310 HOH B 345 CRYST1 67.400 92.860 118.930 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014837 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010769 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008408 0.00000 CONECT 5899 5900 CONECT 5900 5899 5901 5914 CONECT 5901 5900 5902 5913 CONECT 5902 5901 5903 CONECT 5903 5902 5904 5911 CONECT 5904 5903 5905 5931 5932 CONECT 5905 5904 5906 5910 5933 CONECT 5906 5905 5907 5934 5935 CONECT 5907 5906 5908 5936 5937 CONECT 5908 5907 5909 5938 5939 CONECT 5909 5908 5910 5940 5941 CONECT 5910 5905 5909 5942 5943 CONECT 5911 5903 5912 5944 CONECT 5912 5911 5913 5945 CONECT 5913 5901 5912 5946 CONECT 5914 5900 5915 5947 CONECT 5915 5914 5916 5923 CONECT 5916 5915 5917 5948 CONECT 5917 5916 5918 5949 CONECT 5918 5917 5919 5922 CONECT 5919 5918 5920 5921 CONECT 5920 5919 CONECT 5921 5919 CONECT 5922 5918 5923 5950 CONECT 5923 5915 5922 5924 CONECT 5924 5923 5925 5951 CONECT 5925 5924 5926 5930 CONECT 5926 5925 5927 5952 CONECT 5927 5926 5928 5953 CONECT 5928 5927 5929 5954 CONECT 5929 5928 5930 5955 CONECT 5930 5925 5929 5956 CONECT 5931 5904 CONECT 5932 5904 CONECT 5933 5905 CONECT 5934 5906 CONECT 5935 5906 CONECT 5936 5907 CONECT 5937 5907 CONECT 5938 5908 CONECT 5939 5908 CONECT 5940 5909 CONECT 5941 5909 CONECT 5942 5910 CONECT 5943 5910 CONECT 5944 5911 CONECT 5945 5912 CONECT 5946 5913 CONECT 5947 5914 CONECT 5948 5916 CONECT 5949 5917 CONECT 5950 5922 CONECT 5951 5924 CONECT 5952 5926 CONECT 5953 5927 CONECT 5954 5928 CONECT 5955 5929 CONECT 5956 5930 CONECT 5957 5958 CONECT 5958 5957 5959 5972 CONECT 5959 5958 5960 5971 CONECT 5960 5959 5961 CONECT 5961 5960 5962 5969 CONECT 5962 5961 5963 5989 5990 CONECT 5963 5962 5964 5968 5991 CONECT 5964 5963 5965 5992 5993 CONECT 5965 5964 5966 5994 5995 CONECT 5966 5965 5967 5996 5997 CONECT 5967 5966 5968 5998 5999 CONECT 5968 5963 5967 6000 6001 CONECT 5969 5961 5970 6002 CONECT 5970 5969 5971 6003 CONECT 5971 5959 5970 6004 CONECT 5972 5958 5973 6005 CONECT 5973 5972 5974 5981 CONECT 5974 5973 5975 6006 CONECT 5975 5974 5976 6007 CONECT 5976 5975 5977 5980 CONECT 5977 5976 5978 5979 CONECT 5978 5977 CONECT 5979 5977 CONECT 5980 5976 5981 6008 CONECT 5981 5973 5980 5982 CONECT 5982 5981 5983 6009 CONECT 5983 5982 5984 5988 CONECT 5984 5983 5985 6010 CONECT 5985 5984 5986 6011 CONECT 5986 5985 5987 6012 CONECT 5987 5986 5988 6013 CONECT 5988 5983 5987 6014 CONECT 5989 5962 CONECT 5990 5962 CONECT 5991 5963 CONECT 5992 5964 CONECT 5993 5964 CONECT 5994 5965 CONECT 5995 5965 CONECT 5996 5966 CONECT 5997 5966 CONECT 5998 5967 CONECT 5999 5967 CONECT 6000 5968 CONECT 6001 5968 CONECT 6002 5969 CONECT 6003 5970 CONECT 6004 5971 CONECT 6005 5972 CONECT 6006 5974 CONECT 6007 5975 CONECT 6008 5980 CONECT 6009 5982 CONECT 6010 5984 CONECT 6011 5985 CONECT 6012 5986 CONECT 6013 5987 CONECT 6014 5988 CONECT 6015 6016 CONECT 6016 6015 6017 6030 CONECT 6017 6016 6018 6029 CONECT 6018 6017 6019 CONECT 6019 6018 6020 6027 CONECT 6020 6019 6021 6047 6048 CONECT 6021 6020 6022 6026 6049 CONECT 6022 6021 6023 6050 6051 CONECT 6023 6022 6024 6052 6053 CONECT 6024 6023 6025 6054 6055 CONECT 6025 6024 6026 6056 6057 CONECT 6026 6021 6025 6058 6059 CONECT 6027 6019 6028 6060 CONECT 6028 6027 6029 6061 CONECT 6029 6017 6028 6062 CONECT 6030 6016 6031 6063 CONECT 6031 6030 6032 6039 CONECT 6032 6031 6033 6064 CONECT 6033 6032 6034 6065 CONECT 6034 6033 6035 6038 CONECT 6035 6034 6036 6037 CONECT 6036 6035 CONECT 6037 6035 CONECT 6038 6034 6039 6066 CONECT 6039 6031 6038 6040 CONECT 6040 6039 6041 6067 CONECT 6041 6040 6042 6046 CONECT 6042 6041 6043 6068 CONECT 6043 6042 6044 6069 CONECT 6044 6043 6045 6070 CONECT 6045 6044 6046 6071 CONECT 6046 6041 6045 6072 CONECT 6047 6020 CONECT 6048 6020 CONECT 6049 6021 CONECT 6050 6022 CONECT 6051 6022 CONECT 6052 6023 CONECT 6053 6023 CONECT 6054 6024 CONECT 6055 6024 CONECT 6056 6025 CONECT 6057 6025 CONECT 6058 6026 CONECT 6059 6026 CONECT 6060 6027 CONECT 6061 6028 CONECT 6062 6029 CONECT 6063 6030 CONECT 6064 6032 CONECT 6065 6033 CONECT 6066 6038 CONECT 6067 6040 CONECT 6068 6042 CONECT 6069 6043 CONECT 6070 6044 CONECT 6071 6045 CONECT 6072 6046 MASTER 371 0 3 15 18 0 9 6 3241 2 174 30 END