HEADER OXIDOREDUCTASE 15-FEB-17 5UTH TITLE CRYSTAL STRUCTURE OF THIOREDOXIN REDUCTASE FROM MYCOBACTERIUM TITLE 2 SMEGMATIS IN COMPLEX WITH FAD COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOREDOXIN REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: MYSMA.00058.A.B1; COMPND 5 EC: 1.8.1.9; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS (STRAIN ATCC 700084 / SOURCE 3 MC(2)155); SOURCE 4 ORGANISM_TAXID: 246196; SOURCE 5 STRAIN: ATCC 700084 / MC(2)155; SOURCE 6 ATCC: 700084; SOURCE 7 GENE: TRXB, MSMEG_6933, MSMEI_6742; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: MYSMA.00058.A.B1 KEYWDS SSGCID, MYCOBACERIUM SMEGMATIS, THIREDOXIN REDUCTASE, FAD, STRUCTURAL KEYWDS 2 GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, KEYWDS 3 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 04-OCT-23 5UTH 1 REMARK REVDAT 2 12-APR-17 5UTH 1 REMARK REVDAT 1 08-MAR-17 5UTH 0 JRNL AUTH J.ABENDROTH,R.M.IRWIN,S.J.MAYCLIN,D.D.LORIMER,T.E.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF THIOREDOXIN REDUCTASE FROM JRNL TITL 2 MYCOBACTERIUM SMEGMATIS IN COMPLEX WITH FAD JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 31595 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1937 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.9838 - 4.6974 1.00 2331 132 0.1641 0.1770 REMARK 3 2 4.6974 - 3.7294 1.00 2173 164 0.1260 0.1510 REMARK 3 3 3.7294 - 3.2583 1.00 2173 139 0.1541 0.2048 REMARK 3 4 3.2583 - 2.9605 1.00 2101 184 0.1739 0.2061 REMARK 3 5 2.9605 - 2.7483 1.00 2156 131 0.1753 0.2053 REMARK 3 6 2.7483 - 2.5863 1.00 2146 131 0.1698 0.1931 REMARK 3 7 2.5863 - 2.4568 1.00 2129 121 0.1744 0.2313 REMARK 3 8 2.4568 - 2.3499 1.00 2095 158 0.1674 0.2121 REMARK 3 9 2.3499 - 2.2594 0.95 2034 131 0.1857 0.2572 REMARK 3 10 2.2594 - 2.1815 0.97 2074 123 0.2568 0.3270 REMARK 3 11 2.1815 - 2.1133 1.00 2112 112 0.1763 0.2193 REMARK 3 12 2.1133 - 2.0529 1.00 2106 144 0.1850 0.2365 REMARK 3 13 2.0529 - 1.9988 0.98 2085 134 0.1879 0.2261 REMARK 3 14 1.9988 - 1.9501 0.94 1943 133 0.2098 0.2673 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2440 REMARK 3 ANGLE : 0.802 3340 REMARK 3 CHIRALITY : 0.056 379 REMARK 3 PLANARITY : 0.006 467 REMARK 3 DIHEDRAL : 14.487 1447 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.7772 9.1791 -13.4229 REMARK 3 T TENSOR REMARK 3 T11: 0.1253 T22: 0.2193 REMARK 3 T33: 0.1431 T12: -0.0322 REMARK 3 T13: 0.0051 T23: -0.0228 REMARK 3 L TENSOR REMARK 3 L11: 1.1974 L22: 2.3712 REMARK 3 L33: 2.4894 L12: -0.3867 REMARK 3 L13: -0.3660 L23: 1.1052 REMARK 3 S TENSOR REMARK 3 S11: 0.0568 S12: -0.0956 S13: 0.0492 REMARK 3 S21: 0.1797 S22: 0.0658 S23: -0.1472 REMARK 3 S31: -0.0885 S32: 0.2377 S33: -0.1338 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 108 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.0287 -1.8182 -6.6309 REMARK 3 T TENSOR REMARK 3 T11: 0.2246 T22: 0.2709 REMARK 3 T33: 0.1938 T12: 0.0148 REMARK 3 T13: -0.0079 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 0.9095 L22: 7.7025 REMARK 3 L33: 3.1878 L12: -2.2162 REMARK 3 L13: 1.0295 L23: -4.0311 REMARK 3 S TENSOR REMARK 3 S11: -0.0338 S12: -0.1444 S13: -0.0216 REMARK 3 S21: 0.4868 S22: 0.1564 S23: -0.0459 REMARK 3 S31: -0.0518 S32: 0.1065 S33: -0.1444 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 129 THROUGH 231 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.5180 -24.0484 -8.8071 REMARK 3 T TENSOR REMARK 3 T11: 0.3427 T22: 0.3891 REMARK 3 T33: 0.2714 T12: 0.0057 REMARK 3 T13: -0.0232 T23: 0.0570 REMARK 3 L TENSOR REMARK 3 L11: 0.8626 L22: 4.0456 REMARK 3 L33: 4.0061 L12: 0.0003 REMARK 3 L13: -0.8506 L23: -2.5961 REMARK 3 S TENSOR REMARK 3 S11: -0.2937 S12: 0.1127 S13: -0.0685 REMARK 3 S21: -0.4269 S22: 0.4432 S23: 0.1508 REMARK 3 S31: 0.5488 S32: -0.2473 S33: -0.0930 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 232 THROUGH 310 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.8703 2.0944 -15.3944 REMARK 3 T TENSOR REMARK 3 T11: 0.1133 T22: 0.2256 REMARK 3 T33: 0.1572 T12: -0.0045 REMARK 3 T13: 0.0167 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.9407 L22: 2.5125 REMARK 3 L33: 1.7083 L12: -0.5185 REMARK 3 L13: -0.3223 L23: -0.4687 REMARK 3 S TENSOR REMARK 3 S11: 0.0155 S12: -0.0575 S13: -0.0514 REMARK 3 S21: 0.1737 S22: 0.0632 S23: 0.2746 REMARK 3 S31: -0.0798 S32: -0.1693 S33: -0.0927 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UTH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1000226462. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : RIGAKU VARIMAX HF REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31655 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 38.976 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 9.399 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.6900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.39800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.270 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2A87 AS FOUND BY MORDA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: ANATRACETOP96 SCREEN, E1: 2M AMMONIUM REMARK 280 SULFATE, 100MM BISTRIS PH 5.5: MYSMA.00058.A.B1.PS38133 AT REMARK 280 22.8MG/ML + 3MM NADP. OVER NIGHT SOAK WITH 5X DROP VOLUME OF FAD REMARK 280 IN RESERVOIR: CRYO: 3M AMMONIUM SULFATE; TRAY 248209H3, PUCK REMARK 280 XTP3-5., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.26667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 102.53333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 102.53333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 51.26667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -232.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -51.26667 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 718 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 781 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 798 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 THR A 3 REMARK 465 SER A 4 REMARK 465 ASP A 311 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 5 CG CD OE1 NE2 REMARK 470 ARG A 179 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 181 CG CD OE1 OE2 REMARK 470 ARG A 183 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 186 CG CD CE NZ REMARK 470 ILE A 187 CG1 CG2 CD1 REMARK 470 LEU A 189 CG CD1 CD2 REMARK 470 GLU A 190 CG CD OE1 OE2 REMARK 470 ARG A 191 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 193 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 196 CG CD OE1 OE2 REMARK 470 ASP A 212 CG OD1 OD2 REMARK 470 LYS A 214 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 49 -107.36 -104.08 REMARK 500 ALA A 113 43.12 -142.10 REMARK 500 PHE A 169 -50.88 -121.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 410 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MYSMA.00058.A RELATED DB: TARGETTRACK DBREF 5UTH A 1 311 UNP A0R7I9 A0R7I9_MYCS2 1 311 SEQADV 5UTH MET A -7 UNP A0R7I9 INITIATING METHIONINE SEQADV 5UTH ALA A -6 UNP A0R7I9 EXPRESSION TAG SEQADV 5UTH HIS A -5 UNP A0R7I9 EXPRESSION TAG SEQADV 5UTH HIS A -4 UNP A0R7I9 EXPRESSION TAG SEQADV 5UTH HIS A -3 UNP A0R7I9 EXPRESSION TAG SEQADV 5UTH HIS A -2 UNP A0R7I9 EXPRESSION TAG SEQADV 5UTH HIS A -1 UNP A0R7I9 EXPRESSION TAG SEQADV 5UTH HIS A 0 UNP A0R7I9 EXPRESSION TAG SEQRES 1 A 319 MET ALA HIS HIS HIS HIS HIS HIS MET SER THR SER GLN SEQRES 2 A 319 THR VAL HIS ASP VAL ILE ILE ILE GLY SER GLY PRO ALA SEQRES 3 A 319 GLY TYR THR ALA ALA ILE TYR ALA ALA ARG ALA GLN LEU SEQRES 4 A 319 LYS PRO LEU VAL PHE GLU GLY THR GLN PHE GLY GLY ALA SEQRES 5 A 319 LEU MET THR THR THR GLU VAL GLU ASN TYR PRO GLY PHE SEQRES 6 A 319 ARG GLU GLY ILE THR GLY PRO GLU LEU MET ASP GLN MET SEQRES 7 A 319 ARG GLU GLN ALA LEU ARG PHE GLY ALA ASP LEU ARG MET SEQRES 8 A 319 GLU ASP VAL ASP ALA VAL GLN LEU GLU GLY PRO VAL LYS SEQRES 9 A 319 THR VAL VAL VAL GLY ASP GLU THR HIS GLN ALA ARG ALA SEQRES 10 A 319 VAL ILE LEU ALA MET GLY ALA ALA ALA ARG HIS LEU GLY SEQRES 11 A 319 VAL PRO GLY GLU GLU ALA LEU THR GLY MET GLY VAL SER SEQRES 12 A 319 THR CYS ALA THR CYS ASP GLY PHE PHE PHE ARG ASP GLN SEQRES 13 A 319 ASP ILE VAL VAL VAL GLY GLY GLY ASP SER ALA MET GLU SEQRES 14 A 319 GLU ALA THR PHE LEU THR ARG PHE ALA ARG SER VAL THR SEQRES 15 A 319 LEU ILE HIS ARG ARG ASP GLU PHE ARG ALA SER LYS ILE SEQRES 16 A 319 MET LEU GLU ARG ALA ARG ALA ASN GLU LYS ILE THR PHE SEQRES 17 A 319 LEU THR ASN THR GLU ILE THR GLN ILE GLU GLY ASP PRO SEQRES 18 A 319 LYS VAL THR GLY VAL ARG LEU ARG ASP THR VAL THR GLY SEQRES 19 A 319 GLU GLU SER LYS LEU ASP VAL THR GLY VAL PHE VAL ALA SEQRES 20 A 319 ILE GLY HIS ASP PRO ARG SER GLU LEU VAL ARG GLY GLN SEQRES 21 A 319 VAL GLU LEU ASP ASP GLU GLY TYR VAL LYS VAL GLN GLY SEQRES 22 A 319 ARG THR THR TYR THR SER LEU ASP GLY VAL PHE ALA ALA SEQRES 23 A 319 GLY ASP LEU VAL ASP HIS THR TYR ARG GLN ALA ILE THR SEQRES 24 A 319 ALA ALA GLY SER GLY CYS ALA ALA SER ILE ASP ALA GLU SEQRES 25 A 319 ARG TRP LEU ALA GLU GLN ASP HET FAD A 400 53 HET SO4 A 401 5 HET SO4 A 402 5 HET SO4 A 403 5 HET SO4 A 404 5 HET SO4 A 405 5 HET SO4 A 406 5 HET SO4 A 407 5 HET SO4 A 408 5 HET SO4 A 409 5 HET SO4 A 410 5 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM SO4 SULFATE ION FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 SO4 10(O4 S 2-) FORMUL 13 HOH *298(H2 O) HELIX 1 AA1 GLY A 16 ALA A 29 1 14 HELIX 2 AA2 GLY A 43 THR A 48 5 6 HELIX 3 AA3 GLY A 63 PHE A 77 1 15 HELIX 4 AA4 CYS A 137 GLY A 142 1 6 HELIX 5 AA5 PHE A 143 ARG A 146 5 4 HELIX 6 AA6 GLY A 156 THR A 167 1 12 HELIX 7 AA7 SER A 185 ASN A 195 1 11 HELIX 8 AA8 SER A 246 ARG A 250 5 5 HELIX 9 AA9 GLY A 279 VAL A 282 5 4 HELIX 10 AB1 GLN A 288 GLN A 310 1 23 SHEET 1 AA1 6 ASP A 80 ARG A 82 0 SHEET 2 AA1 6 LEU A 34 PHE A 36 1 N VAL A 35 O ASP A 80 SHEET 3 AA1 6 VAL A 7 ILE A 13 1 N ILE A 12 O PHE A 36 SHEET 4 AA1 6 GLU A 103 LEU A 112 1 O GLN A 106 N HIS A 8 SHEET 5 AA1 6 LYS A 96 VAL A 100 -1 N VAL A 100 O GLU A 103 SHEET 6 AA1 6 ALA A 88 GLN A 90 -1 N GLN A 90 O THR A 97 SHEET 1 AA2 5 ASP A 80 ARG A 82 0 SHEET 2 AA2 5 LEU A 34 PHE A 36 1 N VAL A 35 O ASP A 80 SHEET 3 AA2 5 VAL A 7 ILE A 13 1 N ILE A 12 O PHE A 36 SHEET 4 AA2 5 GLU A 103 LEU A 112 1 O GLN A 106 N HIS A 8 SHEET 5 AA2 5 VAL A 275 ALA A 277 1 O PHE A 276 N LEU A 112 SHEET 1 AA3 2 GLU A 50 VAL A 51 0 SHEET 2 AA3 2 ILE A 61 THR A 62 -1 O ILE A 61 N VAL A 51 SHEET 1 AA4 2 ALA A 116 ALA A 118 0 SHEET 2 AA4 2 HIS A 242 PRO A 244 -1 O ASP A 243 N ALA A 117 SHEET 1 AA5 5 VAL A 134 SER A 135 0 SHEET 2 AA5 5 GLY A 235 VAL A 238 1 O VAL A 238 N SER A 135 SHEET 3 AA5 5 ASP A 149 VAL A 153 1 N VAL A 151 O PHE A 237 SHEET 4 AA5 5 SER A 172 ILE A 176 1 O ILE A 176 N VAL A 152 SHEET 5 AA5 5 ILE A 198 LEU A 201 1 O THR A 199 N VAL A 173 SHEET 1 AA6 3 THR A 204 GLU A 210 0 SHEET 2 AA6 3 GLY A 217 ASP A 222 -1 O ARG A 219 N GLN A 208 SHEET 3 AA6 3 GLU A 228 LEU A 231 -1 O SER A 229 N LEU A 220 SSBOND 1 CYS A 137 CYS A 140 1555 1555 2.03 SITE 1 AC1 41 ILE A 13 GLY A 14 SER A 15 GLY A 16 SITE 2 AC1 41 PRO A 17 ALA A 18 TYR A 25 PHE A 36 SITE 3 AC1 41 GLU A 37 GLY A 38 GLN A 40 GLY A 42 SITE 4 AC1 41 GLY A 43 ALA A 44 LEU A 45 THR A 48 SITE 5 AC1 41 ASN A 53 ASP A 85 VAL A 86 ALA A 113 SITE 6 AC1 41 MET A 114 GLY A 115 THR A 136 CYS A 140 SITE 7 AC1 41 ARG A 245 LEU A 248 GLY A 279 ASP A 280 SITE 8 AC1 41 ARG A 287 GLN A 288 ALA A 289 ALA A 292 SITE 9 AC1 41 HOH A 515 HOH A 518 HOH A 541 HOH A 565 SITE 10 AC1 41 HOH A 579 HOH A 594 HOH A 596 HOH A 632 SITE 11 AC1 41 HOH A 644 SITE 1 AC2 7 ARG A 71 ARG A 219 HOH A 508 HOH A 564 SITE 2 AC2 7 HOH A 638 HOH A 658 HOH A 659 SITE 1 AC3 3 HIS A 8 ARG A 82 HIS A 105 SITE 1 AC4 6 PRO A 124 GLY A 125 GLU A 126 GLU A 127 SITE 2 AC4 6 ALA A 128 HOH A 583 SITE 1 AC5 2 ARG A 58 GLN A 69 SITE 1 AC6 2 ALA A 117 ARG A 245 SITE 1 AC7 4 HIS A 177 GLU A 181 ARG A 183 HOH A 574 SITE 1 AC8 4 ASP A 256 ASP A 257 LYS A 262 HOH A 635 SITE 1 AC9 6 ASP A 157 SER A 158 GLY A 241 HOH A 505 SITE 2 AC9 6 HOH A 517 HOH A 617 SITE 1 AD1 1 ARG A 76 SITE 1 AD2 5 VAL A 263 GLN A 264 GLY A 265 HOH A 634 SITE 2 AD2 5 HOH A 704 CRYST1 69.280 69.280 153.800 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014434 0.008334 0.000000 0.00000 SCALE2 0.000000 0.016667 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006502 0.00000